RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLRX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160703

Ensembl transcript IDs: ENST00000292199.6, ENST00000409109.6, ENST00000409265.8, ENST00000409991.5, ENST00000422249.5, ENST00000449394.5, ENST00000454811.5, ENST00000468765.1, ENST00000469103.3, ENST00000474751.6, ENST00000481860.6, ENST00000482180.5, ENST00000524562.1, ENST00000525863.1

Found 718 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCTGGCCATCCAAATGCCACATGCTTTGGTCCTTCTAGCTGAATaGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCA +
Preference number: 1 (lower is better)
Translates to: TLAIQMPHALVLLAE*RGGMFHLQARSIDS
Trigger: TGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTGGATGGCCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GASASRGYQAIIPLWQRGLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGAGAAAGCACCAATGTaGGGGCATCCTCGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMEKAPM*GHPRCP
Trigger: TGGACACCGAGGATGCCCTCACATTGGTGCTTTCTC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR GCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGTCCTGGTCAAACATaGCCTAGGAGGGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGSPGQT*PRRATG
Trigger: GCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGAGAAAGCACCAATGTaGGGGCATCCTCGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKEKAPM*GHPRCP
Trigger: TGGACACCGAGGATGCCCTCACATTGGTGCTTTCTC...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCCAAGCCCGAAGCATTaGTTCACCATCTTTAACTTG +
Preference number: 2 (lower is better)
Translates to: STNVRASSVSTGEHKAGGPSPKH*FTIFNL
Trigger: CAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTT +
Preference number: 2 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMFGPSS*MERRHV
Trigger: AACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTAGTCCTGGTCAAACATaGCCTAGGAGGGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: VLLAEWRGGMFHLQARSISPGQT*PRRATG
Trigger: GCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGGATGGCGACACCCCTaGCATGGCAGACATAAGATG +
Preference number: 2 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKGWRHP*HGRHKM
Trigger: CATCTTATGTCTGCCATGCCAGGGGTGTCGCCATCC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAAGCTTCCAACACATCTaGATGGCGACACCCCTGGCA +
Preference number: 2 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKSFQHI*MATPLA
Trigger: TGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTAGTCCTGGTCAAACATaGCCTAGGAGGGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSSPGQT*PRRATG
Trigger: GCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACT...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGTCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 2 (lower is better)
Translates to: GASASRGYQAIIPLWQRGSPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 2 (lower is better)
Translates to: LNGEEACSISKPEALIHHLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 2 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAATTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTT +
Preference number: 2 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQFGPSS*MERRHV
Trigger: AACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAA...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 2 (lower is better)
Translates to: IAASQVHLPRGATKPSYHSPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 2 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLSPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CAA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCAAATGCCACATGCTTaGGTCCTTCTAGCTGAATGG +
Preference number: 3 (lower is better)
Translates to: STNVRASSVSTGEHKAGGQMPHA*VLLAEW
Trigger: CCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR TCA 72 bp GGCCATCCAAATGCCACATGCTTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTTCCATCTCCAAGCCCG +
Preference number: 3 (lower is better)
Translates to: GHPNATCFGPSS*MERRHVPSPSP
Trigger: CGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTGGATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGTTCACCATCTTTAACTaGGAGATTCCAGACTCAGTC +
Preference number: 3 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRFTIFN*EIPDSV
Trigger: GACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAA...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR CCA 72 bp ATCCAAATGCCACATGCTTTGGTCCTTCTAGCTGAATaGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGC +
Preference number: 3 (lower is better)
Translates to: IQMPHALVLLAE*RGGMFHLQARS
Trigger: GCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAATTCACCATCTTTAACTaGGAGATTCCAGACTCAGTC +
Preference number: 3 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKFTIFN*EIPDSV
Trigger: GACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAA...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR CCA 72 bp CTCCAAGCCCGAAGCATTGATTCACCATCTTTAACTTaGAGATTCCAGACTCAGTCCTGGTCAAACATGCCC +
Preference number: 3 (lower is better)
Translates to: LQARSIDSPSLT*RFQTQSWSNMP
Trigger: GGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR-3UTR CAA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTTCACCATCTTTAACTaGGAGATTCCAGACTCAGTC +
Preference number: 3 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLFTIFN*EIPDSV
Trigger: GACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
3UTR TCA 72 bp GAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTaGTTCACCATCTTTAACTTGGAGATTCCAGACTCA +
Preference number: 3 (lower is better)
Translates to: ERRHVPSPSPKH*FTIFNLEIPDS
Trigger: TGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCTCAGGGGGCTCATCTaGGTGGCGCCGGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGLRGLI*VAPGAL
Trigger: GAGGGCCCCCGGCGCCACCCAGATGAGCCCCCTGAG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCCAGGCACTCGGGCCTaGGGGGTCCTGGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDPGTRA*GVLGRG
Trigger: CCCTCGTCCCAGGACCCCGCAGGCCCGAGTGCCTGG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR GCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGGGGAACAGCCGTCCATaGCTCCCGGGTGGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGGNSRP*LPGGGA
Trigger: CGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCC...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAGATGGGGGCAGCACCTaGCGGCCCAGCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTDGGST*RPSLPS
Trigger: GCTGGGCAAGCTGGGCCGGCAGGTGCTGCCCCCATC...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCTCTCCCCGCGGCCCTTaGACAGCCTCCTCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGSPRGP*TASSPG
Trigger: GCCGGGGGAGGAGGCTGTGCAAGGGCCGCGGGGAGA...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS-3UTR CCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGAGCAGGCGCAGGGCTaGAACCCCGGCGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCEQAQG*NPGATR
Trigger: ACGGGTGGCGCCGGGGTTCCAGCCCTGCGCCTGCTC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGGCCTGCGGGGTCCTaGGACGAGGGGGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDGPAGS*DEGVSE
Trigger: CTCGCTGACCCCCTCGTCCCAGGACCCCGCAGGCCC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCGCGGCCCTGGCACCTaGCAGCGGGCGCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCRGPGT*QRARKR
Trigger: CCTCTTTCGCGCCCGCTGCCAGGTGCCAGGGCCGCG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292199.6
ENST00000409109.6
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACACTGAGACAAGGCCAGTaGGGGGAGCCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTLRQGQ*GEPGLG
Trigger: CCCCAGGCCGGGCTCCCCCCACTGGCCTTGTCTCAG...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCTCAGGGGGCTCATCTaGGTGGCGCCGGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDLRGLI*VAPGAL
Trigger: GAGGGCCCCCGGCGCCACCCAGATGAGCCCCCTGAG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGGGAACAGCCGTCCATaGCTCCCGGGTGGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMGNSRP*LPGGGA
Trigger: CGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGGGTCTCGGAGGTCCTTaGAGGCCTCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGGLGGP*RPQGPG
Trigger: GCCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACC...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCTGAGACAAGGCCAGTaGGGGGAGCCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDLRQGQ*GEPGLG
Trigger: CCCCAGGCCGGGCTCCCCCCACTGGCCTTGTCTCAG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACACGGTTGCGGTCCAGCTaGGCAGCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTRLRSS*AASSSR
Trigger: CCTGGAGCTGCTGGCTGCCCAGCTGGACCGCAACCG...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAGCATGGCGGGCACGGTaGACACGAAGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTAWRAR*TRRCLH
Trigger: GTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGC...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCCTGCCAGGTTGAGCTaGCGCAGGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGPARLS*RRELST
Trigger: GGTGCTCAGCTCCCTGCGTCAGCTCAACCTGGCAGG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCCTGCCAGGTTGAGCTaGCGCAGGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGPARLS*RRELST
Trigger: GGTGCTCAGCTCCCTGCGTCAGCTCAACCTGGCAGG...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGCGTCCCCTCTGTCAGTaGCACCACCACCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRRPLCQ*HHHPGT
Trigger: GGTGCCCGGGTGGTGGTGTCACTGACAGAGGGGACG...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCCGTCCCCTCTGTCAGTaGCACCACCACCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCRPLCQ*HHHPGT
Trigger: GGTGCCCGGGTGGTGGTGTCACTGACAGAGGGGACG...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCCGTCCCCTCTGTCAGTaGCACCACCACCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLRPLCQ*HHHPGT
Trigger: GGTGCCCGGGTGGTGGTGTCACTGACAGAGGGGACG...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAGGGCATGCCTTCCGCTaGCCAGCACAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTGHAFR*PAQLPP
Trigger: TGGTGGCAGCTGTGCTGGGCAGCGGAAGGCATGCCC...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGTCTCGGAGGTCCTTaGAGGCCTCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDGLGGP*RPQGPG
Trigger: GCCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGGTCTCGGAGGTCCTTaGAGGCCTCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMGLGGP*RPQGPG
Trigger: GCCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACATCCCCAAGGCCCGTGTaGAGCAGGGACAGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTSPRPV*SRDRCV
Trigger: GACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGA...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCCCTGCAGCTGCCGGTTaGGGTCCAGCTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCPAAAG*GPAGQP
Trigger: TGGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGG...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGAGCAGGCGCAGGGCTaGAACCCCGGCGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHEQAQG*NPGATR
Trigger: ACGGGTGGCGCCGGGGTTCCAGCCCTGCGCCTGCTC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGAGCCCCAAGAGGCCCTaGGCAAATGGTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGSPKRP*ANGGPT
Trigger: GGTGGGGCCACCATTTGCCCAGGGCCTCTTGGGGCT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGGTGCCTGCACGCCCTaGCTCCACACATGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCGACTP*LHTWGQ
Trigger: CTGGCCCCATGTGTGGAGCCAGGGCGTGCAGGCACC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGGGCAGGGCCCAGGGATaGCAGGTCCTCACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGGRAQG*QVLTGE
Trigger: TTCTCCTGTGAGGACCTGTCATCCCTGGGCCCTGCC...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCGCATGGCGGGCACGGTaGACACGAAGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLAWRAR*TRRCLH
Trigger: GTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGC...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCGCTGACGCAGGGAGCTaGGCACCTCAGCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLADAGS*APQRRS
Trigger: GCTTCTCCGCTGAGGTGCTCAGCTCCCTGCGTCAGC...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCCTGCCAGGTTGAGCTaGCGCAGGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGPARLS*RRELST
Trigger: GGTGCTCAGCTCCCTGCGTCAGCTCAACCTGGCAGG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACGTCCCCTCTGTCAGTaGCACCACCACCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVARPLCQ*HHHPGT
Trigger: GGTGCCCGGGTGGTGGTGTCACTGACAGAGGGGACG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGCTCAAGGTGTCGCTaGACCCGGGCCCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGSSRCR*TRARSQ
Trigger: CTGGGATCGGGCCCGGGTTCAGCGACACCTTGAGCT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGCGGCTATCTGGTGGTaGCCCTCCAGGTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCAAIWW*PSRFRE
Trigger: CTCCCGGAACCTGGAGGGGCACCACCAGATAGCCGC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGCGGCTATCTGGTGGTaGCCCTCCAGGTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMAAIWW*PSRFRE
Trigger: CTCCCGGAACCTGGAGGGGCACCACCAGATAGCCGC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGGGCATGCCTTCCGCTaGCCAGCACAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCGHAFR*PAQLPP
Trigger: TGGTGGCAGCTGTGCTGGGCAGCGGAAGGCATGCCC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCTCCCCAAGGCCCGTGTaGAGCAGGGACAGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCSPRPV*SRDRCV
Trigger: GACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGA...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGTTCCAGGGAAGGGTaGTCCCGGGCAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGSSREG*SRAALA
Trigger: GGCCAGAGCTGCCCGGGAGCACCCTTCCCTGGAACT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCAGTTCCAGGGAAGGGTaGTCCCGGGCAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCSSREG*SRAALA
Trigger: GGCCAGAGCTGCCCGGGAGCACCCTTCCCTGGAACT...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCAGAGCTTCCCAGCTaGTCCAGGAGGGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCPELPS*SRRALT
Trigger: GGTCAGGGCCCTCCTGGAGCAGCTGGGAAGCTCTGG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGGGCCTGCGGGGTCCTaGGACGAGGGGGTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKGPAGS*DEGVSE
Trigger: CTCGCTGACCCCCTCGTCCCAGGACCCCGCAGGCCC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAGCCCTGGGCAAATGGTaGCCCCACCTCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTALGKW*PHLILG
Trigger: TCCCAGGATGAGGTGGGGCCACCATTTGCCCAGGGC...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCAGCCCCAAGAGGCCCTaGGCAAATGGTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLSPKRP*ANGGPT
Trigger: GGTGGGGCCACCATTTGCCCAGGGCCTCTTGGGGCT...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGAAGGTTGGGCCAAACTaGCGCTCCTCCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGKVGPN*RSSLGS
Trigger: GCTGCCCAGGGAGGAGCGCCAGTTTGGCCCAACCTT...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATCTGAGACAAGGCCAGTaGGGGGAGCCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHLRQGQ*GEPGLG
Trigger: CCCCAGGCCGGGCTCCCCCCACTGGCCTTGTCTCAG...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGCAGCGGCTATCTGGTaGTGCCCCTCCAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCAAAIW*CPSRFR
Trigger: CCGGAACCTGGAGGGGCACCACCAGATAGCCGCTGC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCAGGCAGCGGCTATCTaGTGGTGCCCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGQAAAI*WCPSRF
Trigger: GAACCTGGAGGGGCACCACCAGATAGCCGCTGCCTG...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGTCTGCCCAGCAGGCGTaGGGGCATGCAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGSAQQA*GHAGSA
Trigger: TGCACTTCCTGCATGCCCCCACGCCTGCTGGGCAGA...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGGTGCCTGCACGCCCTaGCTCCACACATGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSGACTP*LHTWGQ
Trigger: CTGGCCCCATGTGTGGAGCCAGGGCGTGCAGGCACC...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACGGTTGCGGTCCAGCTaGGCAGCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSRLRSS*AASSSR
Trigger: CCTGGAGCTGCTGGCTGCCCAGCTGGACCGCAACCG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCCACAGGAGAAGGGGATaGGCAGCTCGAAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLHRRRG*AARRPA
Trigger: TGCCGGCCTTCGAGCTGCTCATCCCCTTCTCCTGTG...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGGCAGGGCCCAGGGATaGCAGGTCCTCACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCGRAQG*QVLTGE
Trigger: TTCTCCTGTGAGGACCTGTCATCCCTGGGCCCTGCC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGTGTGGCAGAGACACCTaGACCGCCAACGGCATACCC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGCGRDT*TANGIP
Trigger: GGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACA...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGACCAGGTGGTCACGCTaGGCTGGTGTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGTRWSR*AGVAET
Trigger: TGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGCATGGCGGGCACGGTaGACACGAAGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAAWRAR*TRRCLH
Trigger: GTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGTGGTCAAGGAGCTCTaGTGGGGGCAGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAVVKEL*WGQHLP
Trigger: CGGCAGGTGCTGCCCCCATCAGAGCTCCTTGACCAC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCAGGGCCCAGGCTGTTaGGTTGCAAGCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGQGPGC*VASPAS
Trigger: GGAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCGGACAGGTGCGTCACTaGGGTGTTTCCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLGQVRH*GVSCQP
Trigger: GGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCC...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGGACAGGTGCGTCACTaGGGTGTTTCCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCGQVRH*GVSCQP
Trigger: GGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGCTCAAGGTGTCGCTaGACCCGGGCCCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSSSRCR*TRARSQ
Trigger: CTGGGATCGGGCCCGGGTTCAGCGACACCTTGAGCT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCCAGGCACTCGGGCCTaGGGGGTCCTGGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLPGTRA*GVLGRG
Trigger: CCCTCGTCCCAGGACCCCGCAGGCCCGAGTGCCTGG...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR GCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACCAGGCACTCGGGCCTaGGGGGTCCTGGGACGAGGG +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQPGTRA*GVLGRG
Trigger: CCCTCGTCCCAGGACCCCGCAGGCCCGAGTGCCTGG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTACAGCACCACTGTCTaGACCCGGCGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLYSTTV*TRRPQA
Trigger: TGCCTGTGGGCGCCGGGTGCAGACAGTGGTGCTGTA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGTACAGCACCACTGTCTaGACCCGGCGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRYSTTV*TRRPQA
Trigger: TGCCTGTGGGCGCCGGGTGCAGACAGTGGTGCTGTA...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGATGCTTGTAAGGGTCTaGCCAGCAGGCGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGMLVRV*PAGVGA
Trigger: TGCCCCCACGCCTGCTGGGCAGACCCTTACAAGCAT...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAATGCTTGTAAGGGTCTaGCCAGCAGGCGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTMLVRV*PAGVGA
Trigger: TGCCCCCACGCCTGCTGGGCAGACCCTTACAAGCAT...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGGCAGCCAGGTATTCCTaGATGGCGGGCACGGTGAAC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGAARYS*MAGTVN
Trigger: GTTCACCGTGCCCGCCATGCAGGAATACCTGGCTGC...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATGGGGGCAGCACCTaGCGGCCCAGCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIDGGST*RPSLPS
Trigger: GCTGGGCAAGCTGGGCCGGCAGGTGCTGCCCCCATC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGGGCATGCCTTCCGCTaGCCAGCACAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAGHAFR*PAQLPP
Trigger: TGGTGGCAGCTGTGCTGGGCAGCGGAAGGCATGCCC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCCCAGGCTGTTGAGTTaGAAGCCCAGCTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGPRLLS*KPSFRA
Trigger: TGCCCGGAAGCTGGGCTTGCAACTCAACAGCCTGGG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGGTCTCGGAGGTCCTTaGAGGCCTCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGGLGGP*RPQGPG
Trigger: GCCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATCCCCAAGGCCCGTGTaGAGCAGGGACAGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVASPRPV*SRDRCV
Trigger: GACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGTTCCAGGGAAGGGTaGTCCCGGGCAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSSSREG*SRAALA
Trigger: GGCCAGAGCTGCCCGGGAGCACCCTTCCCTGGAACT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTCCAGAGCTTCCCAGCTaGTCCAGGAGGGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAPELPS*SRRALT
Trigger: GGTCAGGGCCCTCCTGGAGCAGCTGGGAAGCTCTGG...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGAGCAGGCGCAGGGCTaGAACCCCGGCGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQEQAQG*NPGATR
Trigger: ACGGGTGGCGCCGGGGTTCCAGCCCTGCGCCTGCTC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGAGGCCCTGGGCAAATaGTGGCCCCACCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMREALGK*WPHLIL
Trigger: CAGGATGAGGTGGGGCCACCATTTGCCCAGGGCCTC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTCCATGCCTCCCGGGTaGGGGAGCGCTATCTACCGA +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMSMPPG*GSAIYR
Trigger: TCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCAGTTGCAGAGGCGCTaGGGAACAGCCGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMQLQRR*GTAVHA
Trigger: GGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTG...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCAGTTGCAGAGGCGCTaGGGAACAGCCGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGQLQRR*GTAVHA
Trigger: GGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAGGTTGGGCCAAACTaGCGCTCCTCCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGKVGPN*RSSLGS
Trigger: GCTGCCCAGGGAGGAGCGCCAGTTTGGCCCAACCTT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGTGGGGATACGGCCAATaGCAGAGGGCCGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGWGYGQ*QRAEWS
Trigger: TGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCA...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACATACCCGCAGTACGGCTaGTTGAGGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTYPQYG*LRRSWK
Trigger: CTTCCAGCTCCGCCTCAACCAGCCGTACTGCGGGTA...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCTCTGCCCAGCAGGCGTaGGGGCATGCAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCSAQQA*GHAGSA
Trigger: TGCACTTCCTGCATGCCCCCACGCCTGCTGGGCAGA...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGGTGCCTGCACGCCCTaGCTCCACACATGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGGACTP*LHTWGQ
Trigger: CTGGCCCCATGTGTGGAGCCAGGGCGTGCAGGCACC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCACATCTCCAGCACCATaGCCTGAGCCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCTSPAP*PEPPPP
Trigger: GGGAGGCGGTGGCTCAGGCCATGGTGCTGGAGATGT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACTCAGGGGGCTCATCTaGGTGGCGCCGGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQLRGLI*VAPGAL
Trigger: GAGGGCCCCCGGCGCCACCCAGATGAGCCCCCTGAG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATCGGTTGCGGTCCAGCTaGGCAGCCAGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHRLRSS*AASSSR
Trigger: CCTGGAGCTGCTGGCTGCCCAGCTGGACCGCAACCG...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGAAGTCTCGCAAGACCTaGCGGCCCTCTGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGKSRKT*RPSELS
Trigger: GCTGAGCTCAGAGGGCCGCCAGGTCTTGCGAGACTT...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGACCGACTTCTGTCCTaGCAGCGGGCGCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCDRLLS*QRARKR
Trigger: CCTCTTTCGCGCCCGCTGCCAGGACAGAAGTCGGTC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACCCGGCTCCTCGGCGTaGCGCTTCCTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQPGSSA*RFLPTS
Trigger: GGAGGTGGGCAGGAAGCGCCACGCCGAGGAGCCGGG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS-3UTR TCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCCGCAGTACGGCTGGTTaGGGCGGAGCTGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCRSTAG*GGAGSR
Trigger: TCTACTTCCAGCTCCGCCTCAACCAGCCGTACTGCG...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGCGCAGTACGGCTGGTTaGGGCGGAGCTGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRRSTAG*GGAGSR
Trigger: TCTACTTCCAGCTCCGCCTCAACCAGCCGTACTGCG...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTGTGGCAGAGACACCTaGACCGCCAACGGCATACCC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMCGRDT*TANGIP
Trigger: GGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCTGTGGCAGAGACACCTaGACCGCCAACGGCATACCC +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCCGRDT*TANGIP
Trigger: GGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACA...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATACCAGGTGGTCACGCTaGGCTGGTGTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDTRWSR*AGVAET
Trigger: TGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAACTCCTCCTCCGTCCTaGTGCCAGCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKTPPPS*CQPPGS
Trigger: GCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGT...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTACTCCTCCTCCGTCCTaGTGCCAGCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLATPPPS*CQPPGS
Trigger: GCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATACTCCTCCTCCGTCCTaGTGCCAGCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHTPPPS*CQPPGS
Trigger: GCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGT...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGGCATCCAGGTTCTTaGTGGGGCAGCCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDGHPGS*WGSQAE
Trigger: CTCAGCTTGGCTGCCCCATCAAGAACCTGGATGCCC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGTGGTCAAGGAGCTCTaGTGGGGGCAGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGVVKEL*WGQHLP
Trigger: CGGCAGGTGCTGCCCCCATCAGAGCTCCTTGACCAC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGTGGTCAAGGAGCTCTaGTGGGGGCAGCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHVVKEL*WGQHLP
Trigger: CGGCAGGTGCTGCCCCCATCAGAGCTCCTTGACCAC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGCTGACGCAGGGAGCTaGGCACCTCAGCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKADAGS*APQRRS
Trigger: GCTTCTCCGCTGAGGTGCTCAGCTCCCTGCGTCAGC...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGGACAGGTGCGTCACTaGGGTGTTTCCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAGQVRH*GVSCQP
Trigger: GGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTAGCTCAAGGTGTCGCTaGACCCGGGCCCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLASSRCR*TRARSQ
Trigger: CTGGGATCGGGCCCGGGTTCAGCGACACCTTGAGCT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGGGAACAGCCGTCCATaGCTCCCGGGTGGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSGNSRP*LPGGGA
Trigger: CGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGGGAACAGCCGTCCATaGCTCCCGGGTGGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLGNSRP*LPGGGA
Trigger: CGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGGCGTGCTCTTGCCTGTaGCCACTGTCCCATACAGCA +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGACSCL*PLSHTA
Trigger: TGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGC...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGCACCAGCGTGCTCTTaGCTGTGCCCACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRAPACS*LCPLSH
Trigger: ATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGCACCAGCGTGCTCTTaGCTGTGCCCACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMAPACS*LCPLSH
Trigger: ATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAACAAAGTCCCGTGCCTaGCAGCCGGAAGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTTKSRA*QPEVEV
Trigger: AACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGT...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGACAAAGTCCCGTGCCTaGCAGCCGGAAGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGTKSRA*QPEVEV
Trigger: AACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGCGGCCCACGTACTTaGTGGGGATACGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGSGPRT*WGYGQW
Trigger: CCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCAGCGGCCCACGTACTTaGTGGGGATACGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCSGPRT*WGYGQW
Trigger: CCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCT...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCAGGCGTGGGGGCATaGAGGAAGTGCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSAGVGA*RKCKVA
Trigger: TGCCACCTTGCACTTCCTGCATGCCCCCACGCCTGC...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCAGGCGTGGGGGCATaGAGGAAGTGCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAAGVGA*RKCKVA
Trigger: TGCCACCTTGCACTTCCTGCATGCCCCCACGCCTGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGAATTGGAGGGGTCAGTaGTGTCCAGGGTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGNWRGQ*CPGFPR
Trigger: GCGGGGAAACCCTGGACAGCACTGACCCCTCCAATT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCGCAGCCAGGTATTCCTaGATGGCGGGCACGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLAARYS*MAGTVN
Trigger: GTTCACCGTGCCCGCCATGCAGGAATACCTGGCTGC...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGATGGGGGCAGCACCTaGCGGCCCAGCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQDGGST*RPSLPS
Trigger: GCTGGGCAAGCTGGGCCGGCAGGTGCTGCCCCCATC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGGGCATGCCTTCCGCTaGCCAGCACAGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAGHAFR*PAQLPP
Trigger: TGGTGGCAGCTGTGCTGGGCAGCGGAAGGCATGCCC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATACCTCATCCAGGGCATaGCTTCCGCTGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDTSSRA*LPLPST
Trigger: TGTGCTGGGCAGCGGAAGGCATGCCCTGGATGAGGT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGACCTCATCCAGGGCATaGCTTCCGCTGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRTSSRA*LPLPST
Trigger: TGTGCTGGGCAGCGGAAGGCATGCCCTGGATGAGGT...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCCCAGGCTGTTGAGTTaGAAGCCCAGCTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGPRLLS*KPSFRA
Trigger: TGCCCGGAAGCTGGGCTTGCAACTCAACAGCCTGGG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCCCAGGCTGTTGAGTTaGAAGCCCAGCTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDPRLLS*KPSFRA
Trigger: TGCCCGGAAGCTGGGCTTGCAACTCAACAGCCTGGG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTCCCCAAGGCCCGTGTaGAGCAGGGACAGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHSPRPV*SRDRCV
Trigger: GACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGA...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATCCAGAGCTTCCCAGCTaGTCCAGGAGGGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHPELPS*SRRALT
Trigger: GGTCAGGGCCCTCCTGGAGCAGCTGGGAAGCTCTGG...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACACAAGTCAGGTGCATCTaGCTCGAGGGGCTACCAAGC +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTQVRCI*LEGLPS
Trigger: GCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCCTTTACCCGCGGCTaGCCAGTTCCGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKAFTRG*PVPGAV
Trigger: GACGGCTCCCGGAACTGGGCAGCCGCGGGTAAAGGC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGGGCCCCACCTCATCCTaGGAAAGAAGGTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGGPTSS*ERRSEP
Trigger: AGGCTCTGACCTTCTTTCCCAGGATGAGGTGGGGCC...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGACCGAGCTTCCGTGGTaGCGTATAAAGGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGTELPW*RIKALG
Trigger: CCCTAGGGCCTTTATACGCCACCACGGAAGCTCGGT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATCCATGCCTCCCGGGTaGGGGAGCGCTATCTACCGA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVASMPPG*GSAIYR
Trigger: TCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTCAGTTGCAGAGGCGCTaGGGAACAGCCGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAQLQRR*GTAVHA
Trigger: GGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTG...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTGGCAGAGGGCCGAGTaGTCACCAGAATGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMWQRAE*SPECWP
Trigger: AGGCCAGCATTCTGGTGACCACTCGGCCCTCTGCCA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCTGGGGATACGGCCAATaGCAGAGGGCCGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCWGYGQ*QRAEWS
Trigger: TGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCA...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCGGCCCACGTACTTGCTaGGGATACGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGGPRTC*GYGQWQ
Trigger: CTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCC...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGCCCACGTACTTGCTaGGGATACGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDGPRTC*GYGQWQ
Trigger: CTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTACCCGCAGTACGGCTaGTTGAGGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLYPQYG*LRRSWK
Trigger: CTTCCAGCTCCGCCTCAACCAGCCGTACTGCGGGTA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCACGCTGAGCTGGTGTaGCAGAGACACCTGAACCGC +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGHAELV*QRHLNR
Trigger: GCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGCACGCTGAGCTGGTGTaGCAGAGACACCTGAACCGC +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRHAELV*QRHLNR
Trigger: GCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTG...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGCAGCGGCTATCTGGTaGTGCCCCTCCAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAAAAIW*CPSRFR
Trigger: CCGGAACCTGGAGGGGCACCACCAGATAGCCGCTGC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACAGGCAGCGGCTATCTaGTGGTGCCCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAQAAAI*WCPSRF
Trigger: GAACCTGGAGGGGCACCACCAGATAGCCGCTGCCTG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTTCTGCCCAGCAGGCGTaGGGGCATGCAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIASAQQA*GHAGSA
Trigger: TGCACTTCCTGCATGCCCCCACGCCTGCTGGGCAGA...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAAGGCCAACTTGCCCATaGTTCGGGCTGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTRPTCP*FGLHRP
Trigger: TGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCT...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCAAGTCTCGCAAGACCTaGCGGCCCTCTGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCKSRKT*RPSELS
Trigger: GCTGAGCTCAGAGGGCCGCCAGGTCTTGCGAGACTT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAAGTCTCGCAAGACCTaGCGGCCCTCTGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRKSRKT*RPSELS
Trigger: GCTGAGCTCAGAGGGCCGCCAGGTCTTGCGAGACTT...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACATCCAACACATCTGGATaGCGACACCCCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTSNTSG*RHPWHG
Trigger: GCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGA...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATAAGGGACGCTCCCCTTaGAGGGGCCAACTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHKGRSP*RGQLQW
Trigger: CCACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTT...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGGCAGGGCCCAGGGATaGCAGGTCCTCACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGGRAQG*QVLTGE
Trigger: TTCTCCTGTGAGGACCTGTCATCCCTGGGCCCTGCC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGAAGATGTGCAGCAGCTaGAACTCCTCCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGKMCSS*NSSSVL
Trigger: CAGGACGGAGGAGGAGTTTCAGCTGCTGCACATCTT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGGGCATCCAGGTTCTTaGTGGGGCAGCCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAGHPGS*WGSQAE
Trigger: CTCAGCTTGGCTGCCCCATCAAGAACCTGGATGCCC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACATGCCCAGCTTCTTCTTaGTGGCCTGGGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTCPASS*WPGHSP
Trigger: TGGAGAATGCCCAGGCCATCAAGAAGAAGCTGGGCA...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCCACCACTGTGCACTTaGCTGGTGTCATGCGCACAC +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDPPLCT*LVSCAH
Trigger: GTGTGCGCATGACACCAGTCAAGTGCACAGTGGTGG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACAGGGCCCAGGCTGTTaGGTTGCAAGCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGQGPGC*VASPAS
Trigger: GGAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGACCTGGCGGCCCTCTaGGCTCAGCTCATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMDLAAL*AQLIEV
Trigger: TACTTCAATGAGCTGAGCTCAGAGGGCCGCCAGGTC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCCGATCCCAGCTATTaGGGTTCCGCTGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCPDPSY*GSAGLH
Trigger: GTGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCCCCGATCCCAGCTATTaGGGTTCCGCTGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCPDPSY*GSAGLH
Trigger: GTGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGG...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGARFRR*RCIASV
Trigger: AACTGAAGCTATACAGCGGCACCGCCGGAACCTGGC...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCARFRR*RCIASV
Trigger: AACTGAAGCTATACAGCGGCACCGCCGGAACCTGGC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCACCAGCGTGCTCTTaGCTGTGCCCACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSAPACS*LCPLSH
Trigger: ATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGC...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGACAAAGTCCCGTGCCTaGCAGCCGGAAGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMTKSRA*QPEVEV
Trigger: AACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCACTACAAAGTCCCGTaGCTGCCAGCCGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDHYKVP*LPAGSR
Trigger: TCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGCGGCCCACGTACTTaGTGGGGATACGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSSGPRT*WGYGQW
Trigger: CCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCGCCCATGGTTCGGGCTaGATAGGCCATCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLAHGSG*IGHQGQ
Trigger: TTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGC...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCCCATGGTTCGGGCTaGATAGGCCATCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDAHGSG*IGHQGQ
Trigger: TTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCAGACAGGCAGGAGTGTaGGCAGCCCAGCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCRQAGV*AAQQDL
Trigger: TAGATCCTGCTGGGCTGCGCACACTCCTGCCTGTCT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACCTGCAGCTGCCGGTTaGGGTCCAGCTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQPAAAG*GPAGQP
Trigger: TGGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTTCAGCTCCTGCAGCTaGCGGTTGCGGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAFSSCS*RLRSSW
Trigger: CCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTTCAGCTCCTGCAGCTaGCGGTTGCGGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHFSSCS*RLRSSW
Trigger: CCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAA...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACCAGAGCTTCCCAGCTaGTCCAGGAGGGCCCTGACC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKPELPS*SRRALT
Trigger: GGTCAGGGCCCTCCTGGAGCAGCTGGGAAGCTCTGG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGGTCACATAGCTAGGTaGCTGCCGCCAGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRGHIAR*LPPVSQ
Trigger: CTGAGACACTGGCGGCAGGCACCTAGCTATGTGACC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAAGTCCTGGTCAAACATaGCCTAGGAGGGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTSPGQT*PRRATG
Trigger: GCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACT...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCCAAGTCAGGTGCATCTaGCTCGAGGGGCTACCAAGC +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCQVRCI*LEGLPS
Trigger: GCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGCCCTGGGCAAATGGTaGCCCCACCTCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHALGKW*PHLILG
Trigger: TCCCAGGATGAGGTGGGGCCACCATTTGCCCAGGGC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGCCCTGGGCAAATGGTaGCCCCACCTCATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAALGKW*PHLILG
Trigger: TCCCAGGATGAGGTGGGGCCACCATTTGCCCAGGGC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGAGGCCCTGGGCAAATaGTGGCCCCACCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHEALGK*WPHLIL
Trigger: CAGGATGAGGTGGGGCCACCATTTGCCCAGGGCCTC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTAGCCCCAAGAGGCCCTaGGCAAATGGTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSISPKRP*ANGGPT
Trigger: GGTGGGGCCACCATTTGCCCAGGGCCTCTTGGGGCT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAAGCCCCAAGAGGCCCTaGGCAAATGGTGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKSPKRP*ANGGPT
Trigger: GGTGGGGCCACCATTTGCCCAGGGCCTCTTGGGGCT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGACCGAGCTTCCGTGGTaGCGTATAAAGGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRTELPW*RIKALG
Trigger: CCCTAGGGCCTTTATACGCCACCACGGAAGCTCGGT...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGACGATGATAGCAGCTaGTTCCTGCGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRDDDSS*FLRFLR
Trigger: CCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGACGATGATAGCAGCTaGTTCCTGCGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCDDDSS*FLRFLR
Trigger: CCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGGCCCACGTACTTGCTaGGGATACGGCCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSGPRTC*GYGQWQ
Trigger: CTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCC...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTCACGCTGAGCTGGTGTaGCAGAGACACCTGAACCGC +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAHAELV*QRHLNR
Trigger: GCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTG...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACAGGCAGCGGCTATCTaGTGGTGCCCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGQAAAI*WCPSRF
Trigger: GAACCTGGAGGGGCACCACCAGATAGCCGCTGCCTG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGCCAACTTGCCCATaGTTCGGGCTGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMRPTCP*FGLHRP
Trigger: TGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCAGGCCAACTTGCCCATaGTTCGGGCTGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCRPTCP*FGLHRP
Trigger: TGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCT...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAACATCTCCAGCACCATaGCCTGAGCCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKTSPAP*PEPPPP
Trigger: GGGAGGCGGTGGCTCAGGCCATGGTGCTGGAGATGT...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCCCAGCAGGATCTAGCTaGCAGGAGGCCAAGTTCACC +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLPAGSS*QEAKFT
Trigger: GGTGAACTTGGCCTCCTGCCAGCTAGATCCTGCTGG...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCTCCACTCGCAGCAGCTaGGCCTTGCGCCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGSTRSS*ALRQGL
Trigger: TAATCCTTGGCGCAAGGCCCAGCTGCTGCGAGTGGA...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGTCCAACACATCTGGATaGCGACACCCCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRSNTSG*RHPWHG
Trigger: GCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGA...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTCCAACACATCTGGATaGCGACACCCCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMSNTSG*RHPWHG
Trigger: GCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTCTCCTACTTTCGGGTaGCCTCGGGAACGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHSPTFG*PRERRG
Trigger: CCCCCTGCGTTCCCGAGGCCACCCGAAAGTAGGAGA...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS-3UTR TCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAAAGGGACGCTCCCCTTaGAGGGGCCAACTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKKGRSP*RGQLQW
Trigger: CCACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGCCGGAAGTCGAGGTTaGGATGCTCTAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRAGSRG*DALSHG
Trigger: TCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCCGGAAGTCGAGGTTaGGATGCTCTAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDAGSRG*DALSHG
Trigger: TCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATACCAGAATGCTGGCCTaGGGCAGCATGTATTTGCGC +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDTRMLA*GSMYLR
Trigger: GCGCAAATACATGCTGCCTCAGGCCAGCATTCTGGT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGACCAGAATGCTGGCCTaGGGCAGCATGTATTTGCGC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMTRMLA*GSMYLR
Trigger: GCGCAAATACATGCTGCCTCAGGCCAGCATTCTGGT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATCGCAGTACGGCTGGTTaGGGCGGAGCTGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHRSTAG*GGAGSR
Trigger: TCTACTTCCAGCTCCGCCTCAACCAGCCGTACTGCG...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTACCAGGTGGTCACGCTaGGCTGGTGTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLATRWSR*AGVAET
Trigger: TGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAACCAGGTGGTCACGCTaGGCTGGTGTGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKTRWSR*AGVAET
Trigger: TGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGT...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAACTCCTCCTCCGTCCTaGTGCCAGCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQTPPPS*CQPPGS
Trigger: GCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCAAGATGTGCAGCAGCTaGAACTCCTCCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLKMCSS*NSSSVL
Trigger: CAGGACGGAGGAGGAGTTTCAGCTGCTGCACATCTT...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGCATGGCGGGCACGGTaGACACGAAGGTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSAWRAR*TRRCLH
Trigger: GTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGGGCATCCAGGTTCTTaGTGGGGCAGCCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGGHPGS*WGSQAE
Trigger: CTCAGCTTGGCTGCCCCATCAAGAACCTGGATGCCC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTGCCCAGCTTCTTCTTaGTGGCCTGGGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLCPASS*WPGHSP
Trigger: TGGAGAATGCCCAGGCCATCAAGAAGAAGCTGGGCA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGCTGACGCAGGGAGCTaGGCACCTCAGCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLADAGS*APQRRS
Trigger: GCTTCTCCGCTGAGGTGCTCAGCTCCCTGCGTCAGC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGCTGACGCAGGGAGCTaGGCACCTCAGCGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQADAGS*APQRRS
Trigger: GCTTCTCCGCTGAGGTGCTCAGCTCCCTGCGTCAGC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCCTGCCAGGTTGAGCTaGCGCAGGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLPARLS*RRELST
Trigger: GGTGCTCAGCTCCCTGCGTCAGCTCAACCTGGCAGG...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGGACAGGTGCGTCACTaGGGTGTTTCCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIGQVRH*GVSCQP
Trigger: GGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAARFRR*RCIASV
Trigger: AACTGAAGCTATACAGCGGCACCGCCGGAACCTGGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCGTGCTCTTGCCTGTaGCCACTGTCCCATACAGCA +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAACSCL*PLSHTA
Trigger: TGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGTCCAGAACCATCTTaGGCACCAGCGTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMSPEPS*APACSC
Trigger: GCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAACAAAGTCCCGTGCCTaGCAGCCGGAAGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVATKSRA*QPEVEV
Trigger: AACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGT...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACACTACAAAGTCCCGTaGCTGCCAGCCGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSHYKVP*LPAGSR
Trigger: TCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACACTACAAAGTCCCGTaGCTGCCAGCCGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAHYKVP*LPAGSR
Trigger: TCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGCGGCTATCTGGTGGTaGCCCTCCAGGTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHAAIWW*PSRFRE
Trigger: CTCCCGGAACCTGGAGGGGCACCACCAGATAGCCGC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGGGGCATGCAGGAAGTaGAAGGTGGCACAAACGAGC +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSGACRK*KVAQTS
Trigger: GCTCGTTTGTGCCACCTTGCACTTCCTGCATGCCCC...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCAGGCGTGGGGGCATaGAGGAAGTGCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKAGVGA*RKCKVA
Trigger: TGCCACCTTGCACTTCCTGCATGCCCCCACGCCTGC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATATGCTTGTAAGGGTCTaGCCAGCAGGCGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHMLVRV*PAGVGA
Trigger: TGCCCCCACGCCTGCTGGGCAGACCCTTACAAGCAT...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAATTGGAGGGGTCAGTaGTGTCCAGGGTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVANWRGQ*CPGFPR
Trigger: GCGGGGAAACCCTGGACAGCACTGACCCCTCCAATT...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGCCCATGGTTCGGGCTaGATAGGCCATCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAAHGSG*IGHQGQ
Trigger: TTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCCCTCATAGGCCAACTTaGCCATGGTTCGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLPHRPT*PWFGLH
Trigger: ATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGG...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAGACAGGCAGGAGTGTaGGCAGCCCAGCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVARQAGV*AAQQDL
Trigger: TAGATCCTGCTGGGCTGCGCACACTCCTGCCTGTCT...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGACAGGCAGGAGTGTaGGCAGCCCAGCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSRQAGV*AAQQDL
Trigger: TAGATCCTGCTGGGCTGCGCACACTCCTGCCTGTCT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGGTCACATAGCTAGGTaGCTGCCGCCAGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAGHIAR*LPPVSQ
Trigger: CTGAGACACTGGCGGCAGGCACCTAGCTATGTGACC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGGGGCCAACTCCAGTaGATCAGGAAGGGGATACGA +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGRGQLQ*IRKGIR
Trigger: TCGTATCCCCTTCCTGATCCACTGGAGTTGGCCCCT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATAGGGGCCAACTCCAGTaGATCAGGAAGGGGATACGA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDRGQLQ*IRKGIR
Trigger: TCGTATCCCCTTCCTGATCCACTGGAGTTGGCCCCT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTACCGAGCTTCCGTGGTaGCGTATAAAGGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIATELPW*RIKALG
Trigger: CCCTAGGGCCTTTATACGCCACCACGGAAGCTCGGT...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTAAGGTTGGGCCAAACTaGCGCTCCTCCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIKVGPN*RSSLGS
Trigger: GCTGCCCAGGGAGGAGCGCCAGTTTGGCCCAACCTT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGACGATGATAGCAGCTaGTTCCTGCGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIADDDSS*FLRFLR
Trigger: CCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTGGCAGAGGGCCGAGTaGTCACCAGAATGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAWQRAE*SPECWP
Trigger: AGGCCAGCATTCTGGTGACCACTCGGCCCTCTGCCA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTGGGGATACGGCCAATaGCAGAGGGCCGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAWGYGQ*QRAEWS
Trigger: TGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTACCCGCAGTACGGCTaGTTGAGGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAYPQYG*LRRSWK
Trigger: CTTCCAGCTCCGCCTCAACCAGCCGTACTGCGGGTA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATCACGCTGAGCTGGTGTaGCAGAGACACCTGAACCGC +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHHAELV*QRHLNR
Trigger: GCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTG...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGCAGCGGCTATCTGGTaGTGCCCCTCCAGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSAAAIW*CPSRFR
Trigger: CCGGAACCTGGAGGGGCACCACCAGATAGCCGCTGC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCCATCAGGGACAAATTaGAGGGGTCAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGPSGTN*RGQCCP
Trigger: TGGACAGCACTGACCCCTCCAATTTGTCCCTGATGG...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACACCATCAGGGACAAATTaGAGGGGTCAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTPSGTN*RGQCCP
Trigger: TGGACAGCACTGACCCCTCCAATTTGTCCCTGATGG...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACCCTGGCTCCACACATaGGGCCAGGAAAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAPWLHT*GQEKPQ
Trigger: CTGAGGTTTTTCCTGGCCCCATGTGTGGAGCCAGGG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTACATCTCCAGCACCATaGCCTGAGCCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSITSPAP*PEPPPP
Trigger: GGGAGGCGGTGGCTCAGGCCATGGTGCTGGAGATGT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCCACGCCCAGGATACTaGCGCCCATCTGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAPRPGY*RPSGPE
Trigger: TTCTGGACCAGATGGGCGCCAGTATCCTGGGCGTGG...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACTCAGGGGGCTCATCTaGGTGGCGCCGGGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSLRGLI*VAPGAL
Trigger: GAGGGCCCCCGGCGCCACCCAGATGAGCCCCCTGAG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGTTCTTCTTGATGGCCTaGGCATTCTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGFFLMA*AFSRAS
Trigger: GGATGCCCTGGAGAATGCCCAGGCCATCAAGAAGAA...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCACTGTGCACTTGACTaGTGTCATGCGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMHCALD*CHAHTC
Trigger: GCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTG...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATCCACTCGCAGCAGCTaGGCCTTGCGCCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVASTRSS*ALRQGL
Trigger: TAATCCTTGGCGCAAGGCCCAGCTGCTGCGAGTGGA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGGATGGCGACACCCCTaGCATGGCAGACATAAGATG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCGWRHP*HGRHKM
Trigger: CATCTTATGTCTGCCATGCCAGGGGTGTCGCCATCC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGGATGGCGACACCCCTaGCATGGCAGACATAAGATG +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCGWRHP*HGRHKM
Trigger: CATCTTATGTCTGCCATGCCAGGGGTGTCGCCATCC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATAGCTTCCAACACATCTaGATGGCGACACCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDSFQHI*MATPLA
Trigger: TGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCAAGGGACGCTCCCCTTaGAGGGGCCAACTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLKGRSP*RGQLQW
Trigger: CCACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTT...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGGCAGGGCCCAGGGATaGCAGGTCCTCACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHGRAQG*QVLTGE
Trigger: TTCTCCTGTGAGGACCTGTCATCCCTGGGCCCTGCC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCCGGAAGTCGAGGTTaGGATGCTCTAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAAGSRG*DALSHG
Trigger: TCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAACCAGAATGCTGGCCTaGGGCAGCATGTATTTGCGC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVATRMLA*GSMYLR
Trigger: GCGCAAATACATGCTGCCTCAGGCCAGCATTCTGGT...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAAGATGTGCAGCAGCTaGAACTCCTCCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAKMCSS*NSSSVL
Trigger: CAGGACGGAGGAGGAGTTTCAGCTGCTGCACATCTT...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGGGCATCCAGGTTCTTaGTGGGGCAGCCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKGHPGS*WGSQAE
Trigger: CTCAGCTTGGCTGCCCCATCAAGAACCTGGATGCCC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTTGCCCAGCTTCTTCTTaGTGGCCTGGGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIACPASS*WPGHSP
Trigger: TGGAGAATGCCCAGGCCATCAAGAAGAAGCTGGGCA...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACCACCACTGTGCACTTaGCTGGTGTCATGCGCACAC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKPPLCT*LVSCAH
Trigger: GTGTGCGCATGACACCAGTCAAGTGCACAGTGGTGG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACAGGGCCCAGGCTGTTaGGTTGCAAGCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQQGPGC*VASPAS
Trigger: GGAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGACCTGGCGGCCCTCTaGGCTCAGCTCATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLADLAAL*AQLIEV
Trigger: TACTTCAATGAGCTGAGCTCAGAGGGCCGCCAGGTC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGACCTGGCGGCCCTCTaGGCTCAGCTCATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHDLAAL*AQLIEV
Trigger: TACTTCAATGAGCTGAGCTCAGAGGGCCGCCAGGTC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGTCCGCTGGACTTCACTaGGGATCACTGACCAGTATT +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGSAGLH*GSLTSI
Trigger: AATACTGGTCAGTGATCCTCAGTGAAGTCCAGCGGA...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACCCGATCCCAGCTATTaGGGTTCCGCTGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGPDPSY*GSAGLH
Trigger: GTGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACCCGATCCCAGCTATTaGGGTTCCGCTGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKPDPSY*GSAGLH
Trigger: GTGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGAGAAAGCACCAATGTaGGGGCATCCTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAEKAPM*GHPRCP
Trigger: TGGACACCGAGGATGCCCTCACATTGGTGCTTTCTC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCCTGTATAGCTTCAGTTaGAGAGGCGCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLLYSFS*RGAGEQ
Trigger: CTGTTCCCCAGCGCCTCTGCAACTGAAGCTATACAG...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHARFRR*RCIASV
Trigger: AACTGAAGCTATACAGCGGCACCGCCGGAACCTGGC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTTACAGCACCACTGTCTaGACCCGGCGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSYSTTV*TRRPQA
Trigger: TGCCTGTGGGCGCCGGGTGCAGACAGTGGTGCTGTA...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTACAGCACCACTGTCTaGACCCGGCGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLYSTTV*TRRPQA
Trigger: TGCCTGTGGGCGCCGGGTGCAGACAGTGGTGCTGTA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAGTCCAGAACCATCTTaGGCACCAGCGTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVASPEPS*APACSC
Trigger: GCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACT...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGGGGCATGCAGGAAGTaGAAGGTGGCACAAACGAGC +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHGACRK*KVAQTS
Trigger: GCTCGTTTGTGCCACCTTGCACTTCCTGCATGCCCC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGCAGGCGTGGGGGCATaGAGGAAGTGCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQAGVGA*RKCKVA
Trigger: TGCCACCTTGCACTTCCTGCATGCCCCCACGCCTGC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTATGCTTGTAAGGGTCTaGCCAGCAGGCGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIMLVRV*PAGVGA
Trigger: TGCCCCCACGCCTGCTGGGCAGACCCTTACAAGCAT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACAGAGAAGTAGGTCTTaGGGGAGGACACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSQRSRS*GRTPPH
Trigger: ATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACAGAGAAGTAGGTCTTaGGGGAGGACACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAQRSRS*GRTPPH
Trigger: ATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATTCCTTGCCCACCTTTTaGAGGGTCGTCTTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDSLPTF*RVVLRK
Trigger: TTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGA...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCTCCTTGCCCACCTTTTaGAGGGTCGTCTTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCSLPTF*RVVLRK
Trigger: TTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGA...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGCTTTTACCCACCATaGGCCCAAACACTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDGFYPP*AQTLVE
Trigger: TTCCACGAGTGTTTGGGCGCATGGTGGGTAAAAGCC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGGCTTTTACCCACCATaGGCCCAAACACTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMGFYPP*AQTLVE
Trigger: TTCCACGAGTGTTTGGGCGCATGGTGGGTAAAAGCC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCTGCCCAGCACAGCTaGCACCACTGTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKAAQHS*HHCALD
Trigger: GTCAAGTGCACAGTGGTGGCAGCTGTGCTGGGCAGC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTACCTCATCCAGGGCATaGCTTCCGCTGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSITSSRA*LPLPST
Trigger: TGTGCTGGGCAGCGGAAGGCATGCCCTGGATGAGGT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTAGACAGGCAGGAGTGTaGGCAGCCCAGCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLARQAGV*AAQQDL
Trigger: TAGATCCTGCTGGGCTGCGCACACTCCTGCCTGTCT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCIWHWS*SNRSRR
Trigger: CCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAAT...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLIWHWS*SNRSRR
Trigger: CCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAAT...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMIWHWS*SNRSRR
Trigger: CCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAAT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATGCAGCAGGGACAGGTaGGTCACTGAGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVACSRDR*VTEVFP
Trigger: AGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTTTCAGCTCCTGCAGCTaGCGGTTGCGGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSFSSCS*RLRSSW
Trigger: CCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAA...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATTTCAGCTCCTGCAGCTaGCGGTTGCGGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHFSSCS*RLRSSW
Trigger: CCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAA...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGTCCTGGTCAAACATaGCCTAGGAGGGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSSPGQT*PRRATG
Trigger: GCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGTCCTGGTCAAACATaGCCTAGGAGGGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIASPGQT*PRRATG
Trigger: GCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACT...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACAAGTCAGGTGCATCTaGCTCGAGGGGCTACCAAGC +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGQVRCI*LEGLPS
Trigger: GCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGGCCCCACCTCATCCTaGGAAAGAAGGTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGGPTSS*ERRSEP
Trigger: AGGCTCTGACCTTCTTTCCCAGGATGAGGTGGGGCC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGAGGCCCTGGGCAAATaGTGGCCCCACCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSEALGK*WPHLIL
Trigger: CAGGATGAGGTGGGGCCACCATTTGCCCAGGGCCTC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGAGGCCCTGGGCAAATaGTGGCCCCACCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHEALGK*WPHLIL
Trigger: CAGGATGAGGTGGGGCCACCATTTGCCCAGGGCCTC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCGGGGATACGATCATCTaGTCGCTGGAGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGGDTII*SLECSS
Trigger: AGAAGAGCACTCCAGCGACCAGATGATCGTATCCCC...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTCTACCGAGCTTCCGTaGTGGCGTATAAAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLSTELP*WRIKAL
Trigger: TAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTTCCATGCCTCCCGGGTaGGGGAGCGCTATCTACCGA +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSSMPPG*GSAIYR
Trigger: TCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGA...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATTCCATGCCTCCCGGGTaGGGGAGCGCTATCTACCGA +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHSMPPG*GSAIYR
Trigger: TCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGA...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACAGTTGCAGAGGCGCTaGGGAACAGCCGTCCATGCC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQQLQRR*GTAVHA
Trigger: GGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATATCACAGGGTCAACGTaGACCGTGTCTAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDITGST*TVSRAK
Trigger: CTTTGCCCTAGACACGGTCCACGTTGACCCTGTGAT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCATCACAGGGTCAACGTaGACCGTGTCTAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCITGST*TVSRAK
Trigger: CTTTGCCCTAGACACGGTCCACGTTGACCCTGTGAT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACTGAGACAAGGCCAGTaGGGGGAGCCCGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSLRQGQ*GEPGLG
Trigger: CCCCAGGCCGGGCTCCCCCCACTGGCCTTGTCTCAG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAAGATGCTCTAAGCCATaGAGCACAAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTRCSKP*STKRRW
Trigger: CCACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCT...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAATGGCAGAGGGCCGAGTaGTCACCAGAATGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKWQRAE*SPECWP
Trigger: AGGCCAGCATTCTGGTGACCACTCGGCCCTCTGCCA...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTTACCCGCAGTACGGCTaGTTGAGGCGGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIYPQYG*LRRSWK
Trigger: CTTCCAGCTCCGCCTCAACCAGCCGTACTGCGGGTA...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAATCTGCCCAGCAGGCGTaGGGGCATGCAGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQSAQQA*GHAGSA
Trigger: TGCACTTCCTGCATGCCCCCACGCCTGCTGGGCAGA...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATCAGGGACAAATTaGAGGGGTCAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCPSGTN*RGQCCP
Trigger: TGGACAGCACTGACCCCTCCAATTTGTCCCTGATGG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACCCTGGCTCCACACATaGGGCCAGGAAAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGPWLHT*GQEKPQ
Trigger: CTGAGGTTTTTCCTGGCCCCATGTGTGGAGCCAGGG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACCCTGGCTCCACACATaGGGCCAGGAAAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKPWLHT*GQEKPQ
Trigger: CTGAGGTTTTTCCTGGCCCCATGTGTGGAGCCAGGG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAACATCTCCAGCACCATaGCCTGAGCCACCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQTSPAP*PEPPPP
Trigger: GGGAGGCGGTGGCTCAGGCCATGGTGCTGGAGATGT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACACTGTGCACTTGACTaGTGTCATGCGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAHCALD*CHAHTC
Trigger: GCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCCAGCAGGATCTAGCTaGCAGGAGGCCAAGTTCACC +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAPAGSS*QEAKFT
Trigger: GGTGAACTTGGCCTCCTGCCAGCTAGATCCTGCTGG...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACCAGCAGGATCTAGCTaGCAGGAGGCCAAGTTCACC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKPAGSS*QEAKFT
Trigger: GGTGAACTTGGCCTCCTGCCAGCTAGATCCTGCTGG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCGCAGTGTGGTAATTTaGCACTGGTCATGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGRSVVI*HWSCSN
Trigger: GTTGCTGCATGACCAGTGCCAAATTACCACACTGCG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTAAGTCTCGCAAGACCTaGCGGCCCTCTGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIKSRKT*RPSELS
Trigger: GCTGAGCTCAGAGGGCCGCCAGGTCTTGCGAGACTT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGATCCACTCGCAGCAGCTaGGCCTTGCGCCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGSTRSS*ALRQGL
Trigger: TAATCCTTGGCGCAAGGCCCAGCTGCTGCGAGTGGA...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGGCCATCATACCATTGTaGCAAAGGGGGCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGAIIPL*QRGHED
Trigger: ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGC...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCTCCTCCACCAAACTaGGTCCCAAACAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAAPPPN*VPNSSP
Trigger: AGGAGAGCTGTTTGGGACCCAGTTTGGTGGAGGAGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACGCAGTACGGCTGGTTaGGGCGGAGCTGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQRSTAG*GGAGSR
Trigger: TCTACTTCCAGCTCCGCCTCAACCAGCCGTACTGCG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGCCCAGCTTCTTCTTaGTGGCCTGGGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHCPASS*WPGHSP
Trigger: TGGAGAATGCCCAGGCCATCAAGAAGAAGCTGGGCA...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACCACCACTGTGCACTTaGCTGGTGTCATGCGCACAC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKPPLCT*LVSCAH
Trigger: GTGTGCGCATGACACCAGTCAAGTGCACAGTGGTGG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTCCGCTGGACTTCACTaGGGATCACTGACCAGTATT +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLSAGLH*GSLTSI
Trigger: AATACTGGTCAGTGATCCTCAGTGAAGTCCAGCGGA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGTTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGFGPSS*MERRHV
Trigger: AACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAA...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGAGAAAGCACCAATGTaGGGGCATCCTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGEKAPM*GHPRCP
Trigger: TGGACACCGAGGATGCCCTCACATTGGTGCTTTCTC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCATCTGGTCGCTGGAGTaGTCTTCTAAAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCIWSLE*SSKTRA
Trigger: GGCTCTGGTTTTAGAAGAGCACTCCAGCGACCAGAT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACTGTATAGCTTCAGTTaGAGAGGCGCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSLYSFS*RGAGEQ
Trigger: CTGTTCCCCAGCGCCTCTGCAACTGAAGCTATACAG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGCGTGCTCTTGCCTGTaGCCACTGTCCCATACAGCA +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIACSCL*PLSHTA
Trigger: TGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGCACCAGCGTGCTCTTaGCTGTGCCCACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLAPACS*LCPLSH
Trigger: ATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGAAGTCGAGGTTGAGATaGTCTAAGCCATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: GASASRGYQAIIPLWQRGKSRLR*SKPWST
Trigger: TGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTT...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGAGTGGTCACCAGAATaGTGGCCTGAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKEWSPE*WPEAAC
Trigger: ACATGCTGCCTCAGGCCAGCATTCTGGTGACCACTC...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGAGTGGTCACCAGAATaGTGGCCTGAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGEWSPE*WPEAAC
Trigger: ACATGCTGCCTCAGGCCAGCATTCTGGTGACCACTC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATAGCGGCCCACGTACTTaGTGGGGATACGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHSGPRT*WGYGQW
Trigger: CCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCT...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGCAGCCAGGTATTCCTaGATGGCGGGCACGGTGAAC +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLAARYS*MAGTVN
Trigger: GTTCACCGTGCCCGCCATGCAGGAATACCTGGCTGC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGCAGCCAGGTATTCCTaGATGGCGGGCACGGTGAAC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQAARYS*MAGTVN
Trigger: GTTCACCGTGCCCGCCATGCAGGAATACCTGGCTGC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTTTGCAGGGTCGTCTTaGGCAAACCCAGCACAATGT +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLFAGSS*ANPAQC
Trigger: ACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTTTGCAGGGTCGTCTTaGGCAAACCCAGCACAATGT +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMFAGSS*ANPAQC
Trigger: ACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATCCTTGCCCACCTTTTaGAGGGTCGTCTTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVASLPTF*RVVLRK
Trigger: TTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGCTGCCCAGCACAGCTaGCACCACTGTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLAAQHS*HHCALD
Trigger: GTCAAGTGCACAGTGGTGGCAGCTGTGCTGGGCAGC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGCTGCCCAGCACAGCTaGCACCACTGTGCACTTGAC +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHAAQHS*HHCALD
Trigger: GTCAAGTGCACAGTGGTGGCAGCTGTGCTGGGCAGC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTCCCAGGCTGTTGAGTTaGAAGCCCAGCTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSPRLLS*KPSFRA
Trigger: TGCCCGGAAGCTGGGCTTGCAACTCAACAGCCTGGG...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSIWHWS*SNRSRR
Trigger: CCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAAT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGATGCAGCAGGGACAGGTaGGTCACTGAGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGCSRDR*VTEVFP
Trigger: AGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCA...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTGCAGCAGGGACAGGTaGGTCACTGAGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLACSRDR*VTEVFP
Trigger: AGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAACGCAGGGGGAGACTTaGCAGAACGCCCGCCATTCA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQTQGET*QNARHS
Trigger: TGAATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS-3UTR GCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGGCTTCCTTGGGTTCTaGCTTATGTATCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAGFLGF*LMYPVL
Trigger: GAGGACCGGATACATAAGGCAGAACCCAAGGAAGCC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409265.8
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGGGGATACGATCATCTaGTCGCTGGAGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAGDTII*SLECSS
Trigger: AGAAGAGCACTCCAGCGACCAGATGATCGTATCCCC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAATCACAGGGTCAACGTaGACCGTGTCTAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSITGST*TVSRAK
Trigger: CTTTGCCCTAGACACGGTCCACGTTGACCCTGTGAT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGATGCTCTAAGCCATaGAGCACAAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMRCSKP*STKRRW
Trigger: CCACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCAGATGCTCTAAGCCATaGAGCACAAAGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLRCSKP*STKRRW
Trigger: CCACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCT...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCTGGTCACCAGAATGCTaGCCTGAGGCAGCATGTATT +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCWSPEC*PEAACI
Trigger: AATACATGCTGCCTCAGGCCAGCATTCTGGTGACCA...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATTGGGGATACGGCCAATaGCAGAGGGCCGAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHWGYGQ*QRAEWS
Trigger: TGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCA...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACCATCAGGGACAAATTaGAGGGGTCAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAPSGTN*RGQCCP
Trigger: TGGACAGCACTGACCCCTCCAATTTGTCCCTGATGG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCGCCCAAACACTCGTaGAACCACCTTGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSAPKHS*NHLDQV
Trigger: AACCTGATCAAGGTGGTTCCACGAGTGTTTGGGCGC...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCATACTGGCGCCCATCTaGTCCAGAACATCATCGTTG +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCILAPI*SRTSSL
Trigger: CAACGATGATGTTCTGGACCAGATGGGCGCCAGTAT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACCACGCCCAGGATACTaGCGCCCATCTGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQPRPGY*RPSGPE
Trigger: TTCTGGACCAGATGGGCGCCAGTATCCTGGGCGTGG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTTTCTTCTTGATGGCCTaGGCATTCTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAFFLMA*AFSRAS
Trigger: GGATGCCCTGGAGAATGCCCAGGCCATCAAGAAGAA...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACCAGCAGGATCTAGCTaGCAGGAGGCCAAGTTCACC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKPAGSS*QEAKFT
Trigger: GGTGAACTTGGCCTCCTGCCAGCTAGATCCTGCTGG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCGCAGTGTGGTAATTTaGCACTGGTCATGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMRSVVI*HWSCSN
Trigger: GTTGCTGCATGACCAGTGCCAAATTACCACACTGCG...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGCTATTGAGGTTCCGCTaGACTTCACTGAGGATCACT +
Preference number: 4 (lower is better)
Translates to: STNVRASSVSTGEHKAGGLLRFR*TSLRIT
Trigger: AGTGATCCTCAGTGAAGTCCAGCGGAACCTCAATAG...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAATCCACTCGCAGCAGCTaGGCCTTGCGCCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKSTRSS*ALRQGL
Trigger: TAATCCTTGGCGCAAGGCCCAGCTGCTGCGAGTGGA...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGGATGGCGACACCCCTaGCATGGCAGACATAAGATG +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHGWRHP*HGRHKM
Trigger: CATCTTATGTCTGCCATGCCAGGGGTGTCGCCATCC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAAGCTTCCAACACATCTaGATGGCGACACCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGSFQHI*MATPLA
Trigger: TGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCT...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGCCATCATACCATTGTaGCAAAGGGGGCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRAIIPL*QRGHED
Trigger: ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCCAGACCTATGTGTGTaGCTGCTGGTAACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMPDLCV*LLVTLV
Trigger: AACCAAGGTTACCAGCAGCCACACACATAGGTCTGG...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409265.8
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCCACCACTGTGCACTTaGCTGGTGTCATGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHPPLCT*LVSCAH
Trigger: GTGTGCGCATGACACCAGTCAAGTGCACAGTGGTGG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCTGAGCTCAGCTCATTaGAGTAGAGGTGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDLSSAH*SRGVAV
Trigger: AACTGCTACACCTCTACTTCAATGAGCTGAGCTCAG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCTGAGCTCAGCTCATTaGAGTAGAGGTGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCLSSAH*SRGVAV
Trigger: AACTGCTACACCTCTACTTCAATGAGCTGAGCTCAG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGACCTGGCGGCCCTCTaGGCTCAGCTCATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSDLAAL*AQLIEV
Trigger: TACTTCAATGAGCTGAGCTCAGAGGGCCGCCAGGTC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAGCTCAAGGTGTCGCTaGACCCGGGCCCGATCCCAG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSSSRCR*TRARSQ
Trigger: CTGGGATCGGGCCCGGGTTCAGCGACACCTTGAGCT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLALCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCTTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCFGPSS*MERRHV
Trigger: AACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAA...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACTGTATAGCTTCAGTTaGAGAGGCGCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGLYSFS*RGAGEQ
Trigger: CTGTTCCCCAGCGCCTCTGCAACTGAAGCTATACAG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCAAGTCGAGGTTGAGATaGTCTAAGCCATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PGGHRGKRFRASGHIARCKSRLR*SKPWST
Trigger: TGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTT...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCACTACAAAGTCCCGTaGCTGCCAGCCGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLHYKVP*LPAGSR
Trigger: TCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTG...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAATAGCAGCTGGTTCCTaGGGTTCCTCCGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKIAAGS*GSSGSL
Trigger: TAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTAT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGAGTGGTCACCAGAATaGTGGCCTGAGGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKEWSPE*WPEAAC
Trigger: ACATGCTGCCTCAGGCCAGCATTCTGGTGACCACTC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGGGGCATGCAGGAAGTaGAAGGTGGCACAAACGAGC +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLGACRK*KVAQTS
Trigger: GCTCGTTTGTGCCACCTTGCACTTCCTGCATGCCCC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGGGGCATGCAGGAAGTaGAAGGTGGCACAAACGAGC +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHGACRK*KVAQTS
Trigger: GCTCGTTTGTGCCACCTTGCACTTCCTGCATGCCCC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTCCTCATAGGCCAACTTaGCCATGGTTCGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIPHRPT*PWFGLH
Trigger: ATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGG...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATTTGCAGGGTCGTCTTaGGCAAACCCAGCACAATGT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAFAGSS*ANPAQC
Trigger: ACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTGTCATGCGCACACCTaGCAGGTTGAGCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLCHAHT*QVELTQ
Trigger: CTGCGTCAGCTCAACCTGGCAGGTGTGCGCATGACA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGGTCACATAGCTAGGTaGCTGCCGCCAGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHGHIAR*LPPVSQ
Trigger: CTGAGACACTGGCGGCAGGCACCTAGCTATGTGACC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGGCCCCACCTCATCCTaGGAAAGAAGGTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSGPTSS*ERRSEP
Trigger: AGGCTCTGACCTTCTTTCCCAGGATGAGGTGGGGCC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCGATCATCTGGTCGCTaGAGTGCTCTTCTAAAACCA +
Preference number: 4 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMRSSGR*SALLKP
Trigger: TGGTTTTAGAAGAGCACTCCAGCGACCAGATGATCG...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCGATCATCTGGTCGCTaGAGTGCTCTTCTAAAACCA +
Preference number: 4 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCRSSGR*SALLKP
Trigger: TGGTTTTAGAAGAGCACTCCAGCGACCAGATGATCG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGGGGATACGATCATCTaGTCGCTGGAGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IAASQVHLPRGATKPSYHGDTII*SLECSS
Trigger: AGAAGAGCACTCCAGCGACCAGATGATCGTATCCCC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGGGGATACGATCATCTaGTCGCTGGAGTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAGDTII*SLECSS
Trigger: AGAAGAGCACTCCAGCGACCAGATGATCGTATCCCC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCACCGAGCTTCCGTGGTaGCGTATAAAGGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLTELPW*RIKALG
Trigger: CCCTAGGGCCTTTATACGCCACCACGGAAGCTCGGT...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTCTACCGAGCTTCCGTaGTGGCGTATAAAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLASTELP*WRIKAL
Trigger: TAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTATCACAGGGTCAACGTaGACCGTGTCTAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAITGST*TVSRAK
Trigger: CTTTGCCCTAGACACGGTCCACGTTGACCCTGTGAT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATGGTCACCAGAATGCTaGCCTGAGGCAGCATGTATT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAWSPEC*PEAACI
Trigger: AATACATGCTGCCTCAGGCCAGCATTCTGGTGACCA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGAGCTTCTGCAGGTTaGTATCAGAGAAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGRASAG*YQRNRR
Trigger: TCTGCGGTTTCTCTGATACCAACCTGCAGAAGCTCT...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCAGGCCAACTTGCCCATaGTTCGGGCTGCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLRPTCP*FGLHRP
Trigger: TGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCT...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTCCCTGGCTCCACACATaGGGCCAGGAAAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSPWLHT*GQEKPQ
Trigger: CTGAGGTTTTTCCTGGCCCCATGTGTGGAGCCAGGG...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACACTGTGCACTTGACTaGTGTCATGCGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKHCALD*CHAHTC
Trigger: GCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTCACTGTGCACTTGACTaGTGTCATGCGCACACCTGC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIHCALD*CHAHTC
Trigger: GCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTG...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCACGCAGTGTGGTAATTTaGCACTGGTCATGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVARSVVI*HWSCSN
Trigger: GTTGCTGCATGACCAGTGCCAAATTACCACACTGCG...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTAGCTTCCAACACATCTaGATGGCGACACCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSISFQHI*MATPLA
Trigger: TGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGCCATCATACCATTGTaGCAAAGGGGGCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAAIIPL*QRGHED
Trigger: ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAAGGGACGCTCCCCTTaGAGGGGCCAACTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSKGRSP*RGQLQW
Trigger: CCACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCGCCGGAAGTCGAGGTTaGGATGCTCTAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLAGSRG*DALSHG
Trigger: TCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGC...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATACCAGAATGCTGGCCTaGGGCAGCATGTATTTGCGC +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHTRMLA*GSMYLR
Trigger: GCGCAAATACATGCTGCCTCAGGCCAGCATTCTGGT...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGAGAAAGCACCAATGTaGGGGCATCCTCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHEKAPM*GHPRCP
Trigger: TGGACACCGAGGATGCCCTCACATTGGTGCTTTCTC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTATAGCAGCTGGTTCCTaGGGTTCCTCCGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSIAAGS*GSSGSL
Trigger: TAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTAT...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCATAGCAGCTGGTTCCTaGGGTTCCTCCGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLIAAGS*GSSGSL
Trigger: TAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTAT...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAGAGAAGTAGGTCTTaGGGGAGGACACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLQRSRS*GRTPPH
Trigger: ATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTG...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCAGAGAAGTAGGTCTTaGGGGAGGACACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHQRSRS*GRTPPH
Trigger: ATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTTTGCAGGGTCGTCTTaGGCAAACCCAGCACAATGT +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAFAGSS*ANPAQC
Trigger: ACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAATCCTTGCCCACCTTTTaGAGGGTCGTCTTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKSLPTF*RVVLRK
Trigger: TTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGA...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTTGCAGCAGGGACAGGTaGGTCACTGAGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSCSRDR*VTEVFP
Trigger: AGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCA...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCAGGGGCCAACTCCAGTaGATCAGGAAGGGGATACGA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLRGQLQ*IRKGIR
Trigger: TCGTATCCCCTTCCTGATCCACTGGAGTTGGCCCCT...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAAGGGGCCAACTCCAGTaGATCAGGAAGGGGATACGA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQRGQLQ*IRKGIR
Trigger: TCGTATCCCCTTCCTGATCCACTGGAGTTGGCCCCT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAAGGTTGGGCCAAACTaGCGCTCCTCCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSKVGPN*RSSLGS
Trigger: GCTGCCCAGGGAGGAGCGCCAGTTTGGCCCAACCTT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGAGCTTCTGCAGGTTaGTATCAGAGAAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSRASAG*YQRNRR
Trigger: TCTGCGGTTTCTCTGATACCAACCTGCAGAAGCTCT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACAGGCAGCGGCTATCTaGTGGTGCCCCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSQAAAI*WCPSRF
Trigger: GAACCTGGAGGGGCACCACCAGATAGCCGCTGCCTG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTATACTGGCGCCCATCTaGTCCAGAACATCATCGTTG +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAILAPI*SRTSSL
Trigger: CAACGATGATGTTCTGGACCAGATGGGCGCCAGTAT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACTATTGAGGTTCCGCTaGACTTCACTGAGGATCACT +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSLLRFR*TSLRIT
Trigger: AGTGATCCTCAGTGAAGTCCAGCGGAACCTCAATAG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGGATGGCGACACCCCTaGCATGGCAGACATAAGATG +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSGWRHP*HGRHKM
Trigger: CATCTTATGTCTGCCATGCCAGGGGTGTCGCCATCC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCATGTGGCAGAGACACCTaGACCGCCAACGGCATACCC +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSCGRDT*TANGIP
Trigger: GGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACA...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTTCCGCTGGACTTCACTaGGGATCACTGACCAGTATT +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSISAGLH*GSLTSI
Trigger: AATACTGGTCAGTGATCCTCAGTGAAGTCCAGCGGA...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACCAAGCCCGAAGCATTaGTTCACCATCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSPSPKH*FTIFNL
Trigger: CAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTATCTGGTCGCTGGAGTaGTCTTCTAAAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIIWSLE*SSKTRA
Trigger: GGCTCTGGTTTTAGAAGAGCACTCCAGCGACCAGAT...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGTATAGCTTCAGTTaGAGAGGCGCTGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHLYSFS*RGAGEQ
Trigger: CTGTTCCCCAGCGCCTCTGCAACTGAAGCTATACAG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTAAGTCGAGGTTGAGATaGTCTAAGCCATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAKSRLR*SKPWST
Trigger: TGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGGCTTTTACCCACCATaGGCCCAAACACTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSGFYPP*AQTLVE
Trigger: TTCCACGAGTGTTTGGGCGCATGGTGGGTAAAAGCC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATGGCTTTTACCCACCATaGGCCCAAACACTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHGFYPP*AQTLVE
Trigger: TTCCACGAGTGTTTGGGCGCATGGTGGGTAAAAGCC...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACGATCATCTGGTCGCTaGAGTGCTCTTCTAAAACCA +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGRSSGR*SALLKP
Trigger: TGGTTTTAGAAGAGCACTCCAGCGACCAGATGATCG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCGATCATCTGGTCGCTaGAGTGCTCTTCTAAAACCA +
Preference number: 4 (lower is better)
Translates to: LEIPDSVLVKHALGGQLARSSGR*SALLKP
Trigger: TGGTTTTAGAAGAGCACTCCAGCGACCAGATGATCG...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGCGCCCAAACACTCGTaGAACCACCTTGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQAPKHS*NHLDQV
Trigger: AACCTGATCAAGGTGGTTCCACGAGTGTTTGGGCGC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAATACTGGCGCCCATCTaGTCCAGAACATCATCGTTG +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKILAPI*SRTSSL
Trigger: CAACGATGATGTTCTGGACCAGATGGGCGCCAGTAT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAATTCTTCTTGATGGCCTaGGCATTCTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQFFLMA*AFSRAS
Trigger: GGATGCCCTGGAGAATGCCCAGGCCATCAAGAAGAA...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTTTCTTCTTGATGGCCTaGGCATTCTCCAGGGCATCC +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSFFLMA*AFSRAS
Trigger: GGATGCCCTGGAGAATGCCCAGGCCATCAAGAAGAA...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACGCAGTGTGGTAATTTaGCACTGGTCATGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKRSVVI*HWSCSN
Trigger: GTTGCTGCATGACCAGTGCCAAATTACCACACTGCG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATTCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDSPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACCAAGCCCGAAGCATTaGTTCACCATCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKPSPKH*FTIFNL
Trigger: CAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAATTGGAGGGGTCAGTaGTGTCCAGGGTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSNWRGQ*CPGFPR
Trigger: GCGGGGAAACCCTGGACAGCACTGACCCCTCCAATT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCATGTCATGCGCACACCTaGCAGGTTGAGCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSCHAHT*QVELTQ
Trigger: CTGCGTCAGCTCAACCTGGCAGGTGTGCGCATGACA...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAGACGATGATAGCAGCTaGTTCCTGCGGTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSDDDSS*FLRFLR
Trigger: CCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTC...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTGGTCACCAGAATGCTaGCCTGAGGCAGCATGTATT +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLWSPEC*PEAACI
Trigger: AATACATGCTGCCTCAGGCCAGCATTCTGGTGACCA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGCCATCATACCATTGTaGCAAAGGGGGCATGAGGAT +
Preference number: 4 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSAIIPL*QRGHED
Trigger: ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGAGCTCAGCTCATTaGAGTAGAGGTGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHLSSAH*SRGVAV
Trigger: AACTGCTACACCTCTACTTCAATGAGCTGAGCTCAG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLFGPSS*MERRHV
Trigger: AACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATTTTGGTCCTTCTAGCTaGATGGAGAGGAGGCATGTT +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHFGPSS*MERRHV
Trigger: AACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAA...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAGTCCAGAACCATCTTaGGCACCAGCGTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSSPEPS*APACSC
Trigger: GCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCAAGTCGAGGTTGAGATaGTCTAAGCCATGGAGCACA +
Preference number: 4 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLKSRLR*SKPWST
Trigger: TGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTT...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR GCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACCTCATAGGCCAACTTaGCCATGGTTCGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSPHRPT*PWFGLH
Trigger: ATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAAGAGCTTCTGCAGGTTaGTATCAGAGAAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQRASAG*YQRNRR
Trigger: TCTGCGGTTTCTCTGATACCAACCTGCAGAAGCTCT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTATTGAGGTTCCGCTaGACTTCACTGAGGATCACT +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHLLRFR*TSLRIT
Trigger: AGTGATCCTCAGTGAAGTCCAGCGGAACCTCAATAG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGATCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGSPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAATCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKSPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAAGCCTAAGGCTTCCTTaGGTTCTGCCTTATGTATCC +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQSLRLP*VLPYVS
Trigger: GGATACATAAGGCAGAACCCAAGGAAGCCTTAGGCT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409265.8
CDS-3UTR TCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACTCTGCCTCCAGACCTaGAGGAATCTTTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSLCLQT*RNLSRG
Trigger: CCCTCTAGAAAGATTCCTTCAGGTCTGGAGGCAGAG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCCAAGCCCGAAGCATTaGTTCACCATCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: LNGEEACSISKPEALIHHPSPKH*FTIFNL
Trigger: CAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR TCA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAACCAAGCCCGAAGCATTaGTTCACCATCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQPSPKH*FTIFNL
Trigger: CAAGTTAAAGATGGTGAATCAATGCTTCGGGCTTGG...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCATCTACCGAGCTTCCGTaGTGGCGTATAAAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSSTELP*WRIKAL
Trigger: TAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGA...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAGCGCCCAAACACTCGTaGAACCACCTTGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSAPKHS*NHLDQV
Trigger: AACCTGATCAAGGTGGTTCCACGAGTGTTTGGGCGC...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTTCACCATCTTTAACTTaGAGATTCCAGACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: VLLAEWRGGMFHLQARSISPSLT*RFQTQS
Trigger: GGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGA...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCATGGTCACCAGAATGCTaGCCTGAGGCAGCATGTATT +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSWSPEC*PEAACI
Trigger: AATACATGCTGCCTCAGGCCAGCATTCTGGTGACCA...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAATACTGGCGCCCATCTaGTCCAGAACATCATCGTTG +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSILAPI*SRTSSL
Trigger: CAACGATGATGTTCTGGACCAGATGGGCGCCAGTAT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAGAGCTTCTGCAGGTTaGTATCAGAGAAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSRASAG*YQRNRR
Trigger: TCTGCGGTTTCTCTGATACCAACCTGCAGAAGCTCT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CCA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACTATTGAGGTTCCGCTaGACTTCACTGAGGATCACT +
Preference number: 4 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSLLRFR*TSLRIT
Trigger: AGTGATCCTCAGTGAAGTCCAGCGGAACCTCAATAG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS GCA 90 bp AGCTGGGCAGCCAGCAGCTCCAGGCCTTCGTCCCCAAGGCCCGTGTaGAGCAGGGACAGGTGCGTCACTGAGGTGTTTCCTGCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SWAASSSRPSSPRPV*SRDRCVTEVFPASP
Trigger: GGGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGACGAAGGCCTGGAGCTGCTGGCTGCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS GCA 90 bp AGGGCCGCTGTGTCACCAGCACCGTTGTACGCCACGTTCAGCTCCTaGAGCTGCCGGTTGCGGTCCAGCTGGGCAGCCAGCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RAAVSPAPLYATFSS*SCRLRSSWAASSSR
Trigger: CCTGGAGCTGCTGGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAACGTGGCGTACAACGGTGCTGGTGACACAGCGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 90 bp TTGTACGCCACGTTCAGCTCCTGCAGCTGCCGGTTGCGGTCCAGCTaGGCAGCCAGCAGCTCCAGGCCTTCGTCCCCAAGGCCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: LYATFSSCSCRLRSS*AASSSRPSSPRPVC
Trigger: GCACACGGGCCTTGGGGACGAAGGCCTGGAGCTGCTGGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAACGTGGCGTACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS GCA 90 bp CAGCTCTCCTACTTTCGGGTGGCCTCGGGAACGCAGGGGGAGACTTaGCAGAACGCCCGCCATTCAGCGCCCAGCTCCGTCCCTCTCGTT +
Preference number: 5 (lower is better)
Translates to: QLSYFRVASGTQGET*QNARHSAPSSVPLV
Trigger: AACGAGAGGGACGGAGCTGGGCGCTGAATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGTTCCCGAGGCCACCCGAAAGTAGGAGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS GCA 90 bp CGCTGTATAGCTTCAGTTGCAGAGGCGCTGGGGAACAGCCGTCCATaGCTCCCGGGTGGGGGAGCGCTATCTACCGAGCTTCCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RCIASVAEALGNSRP*LPGGGALSTELPWW
Trigger: CCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTGAAGCTATACAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000525863.1
CDS GCA 90 bp AGCTCCAGGCCTTCGTCCCCAAGGCCCGTGTGCAGCAGGGACAGGTaGGTCACTGAGGTGTTTCCTGCCAGCCCCTCCATTAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: SSRPSSPRPVCSRDR*VTEVFPASPSISTA
Trigger: TGCCGTGCTAATGGAGGGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGACGAAGGCCTGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 90 bp GGGGCTCATCTGGGTGGCGCCGGGGGCCCTCCACGCCCAGGATACTaGCGCCCATCTGGTCCAGAACATCATCGTTGTAGTAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GAHLGGAGGPPRPGY*RPSGPEHHRCSSPP
Trigger: AGGAGGACTACTACAACGATGATGTTCTGGACCAGATGGGCGCCAGTATCCTGGGCGTGGAGGGCCCCCGGCGCCACCCAGATGAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCATCTCCCCGCGGCCCTaGCACAGCCTCCTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCISPRP*HSLLPR
Trigger: CCGGGGGAGGAGGCTGTGCAAGGGCCGCGGGGAGAT...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS TCA 90 bp CATCTGCACCAGGTGGTCACGCTGAGCTGGTGTGGCAGAGACACCTaGACCGCCAACGGCATACCCGCAGTACGGCTGGTTGAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: HLHQVVTLSWCGRDT*TANGIPAVRLVEAE
Trigger: CTCCGCCTCAACCAGCCGTACTGCGGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGTGCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS TCA 90 bp GCACAATGTAGAGGGCAGCCAGGTATTCCTGCATGGCGGGCACGGTaGACACGAAGGTGCCTGCACGCCCTGGCTCCACACATGGGGCCA +
Preference number: 5 (lower is better)
Translates to: AQCRGQPGIPAWRAR*TRRCLHALAPHMGP
Trigger: TGGCCCCATGTGTGGAGCCAGGGCGTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGCAGGAATACCTGGCTGCCCTCTACATTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS CCA 90 bp TTCAGTTGCAGAGGCGCTGGGGAACAGCCGTCCATGCCTCCCGGGTaGGGGAGCGCTATCTACCGAGCTTCCGTGGTGGCGTATAAAGGC +
Preference number: 5 (lower is better)
Translates to: FSCRGAGEQPSMPPG*GSAIYRASVVAYKG
Trigger: GCCTTTATACGCCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000525863.1
CDS CCA 90 bp ACAGGGTCAACGTGGACCGTGTCTAGGGCAAAGGTTGGGCCAAACTaGCGCTCCTCCCTGGGCAGCCGGCTGAACCACTCAGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TGSTWTVSRAKVGPN*RSSLGSRLNHSARF
Trigger: GAACCTGGCTGAGTGGTTCAGCCGGCTGCCCAGGGAGGAGCGCCAGTTTGGCCCAACCTTTGCCCTAGACACGGTCCACGTTGACCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp GGTTCCGGGAGAGCATCTGCACCAGGTGGTCACGCTGAGCTGGTGTaGCAGAGACACCTGAACCGCCAACGGCATACCCGCAGTACGGCT +
Preference number: 5 (lower is better)
Translates to: GSGRASAPGGHAELV*QRHLNRQRHTRSTA
Trigger: AGCCGTACTGCGGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGTGCAGATGCTCTCCCGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGCGCTGGGCCACAAGTaGGCACAGGGAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCALGHK*AQGGWG
Trigger: GCCCCAGCCTCCCTGTGCCAACTTGTGGCCCAGCGC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGGCCGCCGTCAGCGGGTaGTTGGACAGCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GASASRGYQAIIPLWQRGAAVSG*LDSRSV
Trigger: CACACTGCGGCTGTCCAACAACCCGCTGACGGCGGC...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATTCCTGCAGCTGCCGGTaGCGGTCCAGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDSCSCR*RSSWAA
Trigger: GGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGA...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS GCA 90 bp AACACCAGTCCAGAACCATCTTGCGCACCAGCGTGCTCTTGCCTGTaGCCACTGTCCCATACAGCACCACTGTCTGCACCCGGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: NTSPEPSCAPACSCL*PLSHTAPLSAPGAH
Trigger: GTGGGCGCCGGGTGCAGACAGTGGTGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTGGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp GCTCGAAGGCCGGCAGCCGCCCATAACACCAGTCCAGAACCATCTTaGGCACCAGCGTGCTCTTGCCTGTGCCCACTGTCCCATACAGCA +
Preference number: 5 (lower is better)
Translates to: ARRPAAAHNTSPEPS*APACSCLCPLSHTA
Trigger: TGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTGGTGTTATGGGCGGCTGCCGGCCTTCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp GCTCCTCCACCAAACTGGGTCCCAAACAGCTCTCCTACTTTCGGGTaGCCTCGGGAACGCAGGGGGAGACTTGCCAGAACGCCCGCCATT +
Preference number: 5 (lower is better)
Translates to: APPPNWVPNSSPTFG*PRERRGRLARTPAI
Trigger: AATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGTTCCCGAGGCCACCCGAAAGTAGGAGAGCTGTTTGGGACCCAGTTTGGTGGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS-3UTR CAA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACACGCACCAGCGTGCTCTaGCCTGTGCCCACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTRTSVL*PVPTVP
Trigger: TGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCG...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCGCTGGGCCACAAGTaGGCACAGGGAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAALGHK*AQGGWG
Trigger: GCCCCAGCCTCCCTGTGCCAACTTGTGGCCCAGCGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATAGGTCTCGGAGGTCCTaGCAGGCCTCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDRSRRS*QASGPR
Trigger: CCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACCT...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGCCGCCGTCAGCGGGTaGTTGGACAGCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCAAVSG*LDSRSV
Trigger: CACACTGCGGCTGTCCAACAACCCGCTGACGGCGGC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCCGCCGTCAGCGGGTaGTTGGACAGCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDAAVSG*LDSRSV
Trigger: CACACTGCGGCTGTCCAACAACCCGCTGACGGCGGC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTTCCTGCAGCTGCCGGTaGCGGTCCAGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: CKPGGHRGKRFRASGHIASCSCR*RSSWAA
Trigger: GGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGA...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS TCA 90 bp GCCAGGAAAAACCTCAGGGCATCCCGACGGAAGATGTGCAGCAGCTaGAACTCCTCCTCCGTCCTGATGCCAGCCTCCAGGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: ARKNLRASRRKMCSS*NSSSVLMPASRQPQ
Trigger: CTGTGGCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGTTTCAGCTGCTGCACATCTTCCGTCGGGATGCCCTGAGGTTTTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS TCA 90 bp CCCCGGCTATCTTCCAGATCCCGCAGTAGGAGCTCAAGGTGTCGCTaGACCCGGGCCCGATCCCAGCTATTGAGGTTCCGCTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: PRLSSRSRSRSSRCR*TRARSQLLRFRWTS
Trigger: TGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGGCCCGGGTTCAGCGACACCTTGAGCTCCTACTGCGGGATCTGGAAGATAGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS GCA 90 bp GCCCATAACACCAGTCCAGAACCATCTTGCGCACCAGCGTGCTCTTaGCTGTGCCCACTGTCCCATACAGCACCACTGTCTGCACCCGGC +
Preference number: 5 (lower is better)
Translates to: AHNTSPEPSCAPACS*LCPLSHTAPLSAPG
Trigger: GCCGGGTGCAGACAGTGGTGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTGGTGTTATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp GCGGGAGGACACCCCCTCATAGGCCAACTTGCCCATGGTTCGGGCTaGATAGGCCATCAGGGACAAATTGGAGGGGTCAGTGCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: AGGHPLIGQLAHGSG*IGHQGQIGGVSAVQ
Trigger: CTGGACAGCACTGACCCCTCCAATTTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp CACAGCTGCCACCACTGTGCACTTGACTGGTGTCATGCGCACACCTaGCAGGTTGAGCTGACGCAGGGAGCTGAGCACCTCAGCGGAGAA +
Preference number: 5 (lower is better)
Translates to: HSCHHCALDWCHAHT*QVELTQGAEHLSGE
Trigger: TTCTCCGCTGAGGTGCTCAGCTCCCTGCGTCAGCTCAACCTGGCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTGGTGGCAGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS GCA 90 bp CAAGTTCACCTCATCCAGGGCATGCCTTCCGCTGCCCAGCACAGCTaGCACCACTGTGCACTTGACTGGTGTCATGCGCACACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QVHLIQGMPSAAQHS*HHCALDWCHAHTCQ
Trigger: CTGGCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTGGTGGCAGCTGTGCTGGGCAGCGGAAGGCATGCCCTGGATGAGGTGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS GCA 90 bp AGCGGGTTGTTGGACAGCCGCAGTGTGGTAATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGGTCCTTGCAGGCCTCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SGLLDSRSVVIWHWS*SNRSRRSLQASGPR
Trigger: CCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGCTGTCCAACAACCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS GCA 90 bp CACTCCCAGGTCACTCACCGCAGTGTGGTAATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGGTCCTTGCAGGCCTCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HSQVTHRSVVIWHWS*SNRSRRSLQASGPR
Trigger: CCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGTGAGTGACCTGGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481860.6
CDS CCA 90 bp AGATCTCACCATAGCGGCCCACGTACTTGCTGGGGATACGGCCAATaGCAGAGGGCCGAGTGGTCACCAGAATGCTGGCCTGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RSHHSGPRTCWGYGQ*QRAEWSPECWPEAA
Trigger: TGCTGCCTCAGGCCAGCATTCTGGTGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCTATGGTGAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp TGTCAGGGGCGGTGTTCCTACAGGTCCAGAGCTCCTCCACCAAACTaGGTCCCAAACAGCTCTCCTACTTTCGGGTGGCCTCGGGAACGC +
Preference number: 5 (lower is better)
Translates to: CQGRCSYRSRAPPPN*VPNSSPTFGWPRER
Trigger: GCGTTCCCGAGGCCACCCGAAAGTAGGAGAGCTGTTTGGGACCCAGTTTGGTGGAGGAGCTCTGGACCTGTAGGAACACCGCCCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS CCA 90 bp AGGGAGAGAGAGAGAGGAGGAGGGACCACCGATGGAAGATGGCAGTaGATCCTCTATGCCTCCCTCACCCTGCTTCTCCTTCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: RERERGGGTTDGRWQ*ILYASLTLLLLPAP
Trigger: CGGGGCTGGAAGGAGAAGCAGGGTGAGGGAGGCATAGAGGATCCACTGCCATCTTCCATCGGTGGTCCCTCCTCCTCTCTCTCTCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCGCACCAGCGTGCTCTaGCCTGTGCCCACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGRTSVL*PVPTVP
Trigger: TGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCGCCCAGGCTGTTGAGTaGCAAGCCCAGCTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGAQAVE*QAQLPG
Trigger: GCCCGGAAGCTGGGCTTGCAACTCAACAGCCTGGGC...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAAGGTCTCGGAGGTCCTaGCAGGCCTCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSRSRRS*QASGPR
Trigger: CCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACCT...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGGCCGTCAGCGGGTTGTaGGACAGCCGCAGTGTGGTA +
Preference number: 5 (lower is better)
Translates to: STNVRASSVSTGEHKAGGAVSGL*DSRSVV
Trigger: TACCACACTGCGGCTGTCCAACAACCCGCTGACGGC...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGATCCTGCAGCTGCCGGTaGCGGTCCAGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGSCSCR*RSSWAA
Trigger: GGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGA...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS TCA 90 bp CCGGGTCACTACAAAGTCCCGTGCCTGCCAGCCGGAAGTCGAGGTTaGGATGCTCTAAGCCATGGAGCACAAAGAGGAGGTGGGACCCAG +
Preference number: 5 (lower is better)
Translates to: PGHYKVPCLPAGSRG*DALSHGAQRGGGTQ
Trigger: CTGGGTCCCACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp GCAGCCGCCCATAACACCAGTCCAGAACCATCTTGCGCACCAGCGTaGTCTTGCCTGTGCCCACTGTCCCATACAGCACCACTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: AAAHNTSPEPSCAPA*SCLCPLSHTAPLSA
Trigger: TGCAGACAGTGGTGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTGGTGTTATGGGCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp CAGCCTCCAGGCAGCCACAGACATCCTCTTCAGAGAAGTAGGTCTTaGGGGAGGACACCCCCTCATAGGCCAACTTGCCCATGGTTCGGG +
Preference number: 5 (lower is better)
Translates to: QPPGSHRHPLQRSRS*GRTPPHRPTCPWFG
Trigger: CCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTGAAGAGGATGTCTGTGGCTGCCTGGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp GGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTaGCTGCCGCCAGTGTCTCAGCTTCCAGAGCTTCCCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GHRGKRFRASGHIAR*LPPVSQLPELPSCS
Trigger: GGAGCAGCTGGGAAGCTCTGGAAGCTGAGACACTGGCGGCAGGCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS GCA 90 bp CCAGCACCATGGCCTGAGCCACCGCCTCCCGGCTTTTACCCACCATaGGCCCAAACACTCGTGGAACCACCTGTGACAGAATATGTCACC +
Preference number: 5 (lower is better)
Translates to: PAPWPEPPPPGFYPP*AQTLVEPPVTEYVT
Trigger: GGTGACATATTCTGTCACAGGTGGTTCCACGAGTGTTTGGGCGCATGGTGGGTAAAAGCCGGGAGGCGGTGGCTCAGGCCATGGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469103.3
CDS CCA 90 bp CGAAGTAGCTCATCAGGGGTACTCTCGCGGATCACAGGGTCAACGTaGACCGTGTCTAGGGCAAAGGTTGGGCCAAACTGGCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSSSSGVLSRITGST*TVSRAKVGPNWRSS
Trigger: GGAGGAGCGCCAGTTTGGCCCAACCTTTGCCCTAGACACGGTCCACGTTGACCCTGTGATCCGCGAGAGTACCCCTGATGAGCTACTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp ATGCCCCACTCCCAGGTCACTCACCGCAGTGTGGTAATTTGGCACTaGTCATGCAGCAACAGGTCTCGGAGGTCCTTGCAGGCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: MPHSQVTHRSVVIWH*SCSNRSRRSLQASG
Trigger: CCCTGAGGCCTGCAAGGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGTGAGTGACCTGGGAGTGGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481860.6
CDS-3UTR CAA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGCGCTGGGCCACAAGTaGGCACAGGGAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIALGHK*AQGGWG
Trigger: GCCCCAGCCTCCCTGTGCCAACTTGTGGCCCAGCGC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCGCTGGGCCACAAGTaGGCACAGGGAGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKALGHK*AQGGWG
Trigger: GCCCCAGCCTCCCTGTGCCAACTTGTGGCCCAGCGC...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGCTAGCACAGCTCGGTaGTGGGCAGAGAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCASTAR*WAERSP
Trigger: GGGGCTTCTCTCTGCCCACAACCGAGCTGTGCTAGC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGCTAGCACAGCTCGGTaGTGGGCAGAGAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRASTAR*WAERSP
Trigger: GGGGCTTCTCTCTGCCCACAACCGAGCTGTGCTAGC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACATCAGGGCCCAGGCTGTaGAGTTGCAAGCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTSGPRL*SCKPSF
Trigger: GAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTGA...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGCCGTCAGCGGGTTGTaGGACAGCCGCAGTGTGGTA +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCAVSGL*DSRSVV
Trigger: TACCACACTGCGGCTGTCCAACAACCCGCTGACGGC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGGCCGTCAGCGGGTTGTaGGACAGCCGCAGTGTGGTA +
Preference number: 5 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRAVSGL*DSRSVV
Trigger: TACCACACTGCGGCTGTCCAACAACCCGCTGACGGC...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCGCAGCAGCTGGGCCTaGCGCCAAGGATTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGRSSWA*RQGLRV
Trigger: CACCCTTAATCCTTGGCGCAAGGCCCAGCTGCTGCG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCCGCAGCAGCTGGGCCTaGCGCCAAGGATTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLRSSWA*RQGLRV
Trigger: CACCCTTAATCCTTGGCGCAAGGCCCAGCTGCTGCG...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAACGCAGGGGGAGACTaGCCAGAACGCCCGCCATTC +
Preference number: 5 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMNAGGD*PERPPF
Trigger: GAATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGTT...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409109.6
CDS GCA 90 bp AGCATGTATTTGCGCAGCAGGTTGACGATGATAGCAGCTGGTTCCTaGGGTTCCTCCGGGTCACTACAAAGTCCCGTGCCTGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SMYLRSRLTMIAAGS*GSSGSLQSPVPASR
Trigger: CCGGCTGGCAGGCACGGGACTTTGTAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATACATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp TCCTCCCTGGGCAGCCGGCTGAACCACTCAGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCTGAGTGGGAAGATAAGGGAAATGTGTCA +
Preference number: 5 (lower is better)
Translates to: SSLGSRLNHSARFRR*RCIASEWEDKGNVS
Trigger: TGACACATTTCCCTTATCTTCCCACTCAGAAGCTATACAGCGGCACCGCCGGAACCTGGCTGAGTGGTTCAGCCGGCTGCCCAGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS CCA 90 bp AGTAGGTCTTGCGGGAGGACACCCCCTCATAGGCCAACTTGCCCATaGTTCGGGCTGCATAGGCCATCAGGGACAAATTGGAGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SRSCGRTPPHRPTCP*FGLHRPSGTNWRGQ
Trigger: CTGACCCCTCCAATTTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGCAAGACCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp ATGGGCTCAGTGCTCTGCCAGGGCAACCCTCCCTCCAAGAGGGCTTaGGGGTGCAGGGCTGACAATTCTGCTGGGTTTTCAATAACTGGG +
Preference number: 5 (lower is better)
Translates to: MGSVLCQGNPPSKRA*GCRADNSAGFSITG
Trigger: CCCAGTTATTGAAAACCCAGCAGAATTGTCAGCCCTGCACCCCCAAGCCCTCTTGGAGGGAGGGTTGCCCTGGCAGAGCACTGAGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469103.3
CDS CCA 90 bp GATGGGAGGGAGAGAGAGAGAGGAGGAGGGACCACCGATGGAAGATaGCAGTGGATCCTCTATGCCTCCCTCACCCTGCTTCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: DGRERERGGGTTDGR*QWILYASLTLLLLP
Trigger: TGGAAGGAGAAGCAGGGTGAGGGAGGCATAGAGGATCCACTGCCATCTTCCATCGGTGGTCCCTCCTCCTCTCTCTCTCTCCCTCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACGCACCAGCGTGCTCTaGCCTGTGCCCACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKRTSVL*PVPTVP
Trigger: TGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAGCTAGCACAGCTCGGTaGTGGGCAGAGAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAASTAR*WAERSP
Trigger: GGGGCTTCTCTCTGCCCACAACCGAGCTGTGCTAGC...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGCCCAGGCTGTTGAGTaGCAAGCCCAGCTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGAQAVE*QAQLPG
Trigger: GCCCGGAAGCTGGGCTTGCAACTCAACAGCCTGGGC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATTCAGGGCCCAGGCTGTaGAGTTGCAAGCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDSGPRL*SCKPSF
Trigger: GAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTGA...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTCAGGGCCCAGGCTGTaGAGTTGCAAGCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMSGPRL*SCKPSF
Trigger: GAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTGA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTCCTGCAGCTGCCGGTaGCGGTCCAGCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLSCSCR*RSSWAA
Trigger: GGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGTGTCACCAGCACCGTaGTACGCCACGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCVSPAP*YATFSS
Trigger: GGAGCTGAACGTGGCGTACAACGGTGCTGGTGACAC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGGAGGGGAAGCTTCCAACACATCTGGATGGCGACACCCCTGGCATGGCAGACAGCCCGATCCCAGCTATaGAGGTTCCGCTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: RRGSFQHIWMATPLAWQTARSQL*RFRWTS
Trigger: TGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGGC...TGTCTGCCATGCCAGGGGTGTCGCCATCCAGATGTGTTGGAAGCTTCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS TCA 90 bp CATCCCGACGGAAGATGTGCAGCAGCTGAAACTCCTCCTCCGTCCTaGTGCCAGCCTCCAGGCAGCCACAGACATCCTCTTCAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: HPDGRCAAAETPPPS*CQPPGSHRHPLQRS
Trigger: ACTTCTCTGAAGAGGATGTCTGTGGCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGTTTCAGCTGCTGCACATCTTCCGTCGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp TCACTACAAAGTCCCGTGCCTGCCAGCCGGAAGTCGAGGTTGAGATaGTCTAAGCCATGGAGCACAAAGAGGAGGTGGGACCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLQSPVPASRKSRLR*SKPWSTKRRWDPAA
Trigger: TGCTGCTGGGTCCCACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp TGGTATCAGAGAAACCGCAGATCTCACCATAGCGGCCCACGTACTTaGTGGGGATACGGCCAATGGCAGAGGGCCGAGTGGTCACCAGAA +
Preference number: 5 (lower is better)
Translates to: WYQRNRRSHHSGPRT*WGYGQWQRAEWSPE
Trigger: TTCTGGTGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCTATGGTGAGATCTGCGGTTTCTCTGATACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp CAGAGAAGTAGGTCTTGCGGGAGGACACCCCCTCATAGGCCAACTTaGCCATGGTTCGGGCTGCATAGGCCATCAGGGACAAATTGGAGG +
Preference number: 5 (lower is better)
Translates to: QRSRSCGRTPPHRPT*PWFGLHRPSGTNWR
Trigger: CCTCCAATTTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 90 bp CCACGAGCTCAGCCACTTCCTTGCCCACCTTTTGCAGGGTCGTCTTaGGCAAACCCAGCACAATGTAGAGGGCAGCCAGGTATTCCTGCA +
Preference number: 5 (lower is better)
Translates to: PRAQPLPCPPFAGSS*ANPAQCRGQPGIPA
Trigger: TGCAGGAATACCTGGCTGCCCTCTACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCTCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS CCA 90 bp CTGAGGCAGCATGTATTTGCGCAGCAGGTTGACGATGATAGCAGCTaGTTCCTGCGGTTCCTCCGGGTCACTACAAAGTCCCGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LRQHVFAQQVDDDSS*FLRFLRVTTKSRAC
Trigger: GCAGGCACGGGACTTTGTAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATACATGCTGCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp TATCAGAGAAACCGCAGATCTCACCATAGCGGCCCACGTACTTGCTaGGGATACGGCCAATGGCAGAGGGCCGAGTGGTCACCAGAATGC +
Preference number: 5 (lower is better)
Translates to: YQRNRRSHHSGPRTC*GYGQWQRAEWSPEC
Trigger: GCATTCTGGTGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCTATGGTGAGATCTGCGGTTTCTCTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 90 bp CATCATCGTTGTAGTAGTCCTCCTCTCGAAACATCTCCAGCACCATaGCCTGAGCCACCGCCTCCCGGCTTTTACCCACCATGCGCCCAA +
Preference number: 5 (lower is better)
Translates to: HHRCSSPPLETSPAP*PEPPPPGFYPPCAQ
Trigger: TTGGGCGCATGGTGGGTAAAAGCCGGGAGGCGGTGGCTCAGGCCATGGTGCTGGAGATGTTTCGAGAGGAGGACTACTACAACGATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS CCA 90 bp ATAGACGGATGGGAGGGAGAGAGAGAGAGGAGGAGGGACCACCGATaGAAGATGGCAGTGGATCCTCTATGCCTCCCTCACCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: IDGWEGERERRRDHR*KMAVDPLCLPHPAS
Trigger: AGAAGCAGGGTGAGGGAGGCATAGAGGATCCACTGCCATCTTCCATCGGTGGTCCCTCCTCCTCTCTCTCTCTCCCTCCCATCCGTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAAAGGGACGCTCCCCTaGAAGGGGCCAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAKGTLP*KGPTPV
Trigger: CACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTTT...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACGCACCAGCGTGCTCTaGCCTGTGCCCACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKRTSVL*PVPTVP
Trigger: TGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCAGTCCAGAACCATCTaGCGCACCAGCGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCQSRTI*RTSVLL
Trigger: CAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTG...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCAGTCCAGAACCATCTaGCGCACCAGCGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGQSRTI*RTSVLL
Trigger: CAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCAGTCCAGAACCATCTaGCGCACCAGCGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMQSRTI*RTSVLL
Trigger: CAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTG...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCGCCATCAGGGACAAATaGGAGGGGTCAGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PDSVLVKHALGGQLAQLCAIRDK*EGSVLS
Trigger: GGACAGCACTGACCCCTCCAATTTGTCCCTGATGGC...GCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGCTCAGCCACTTCCTaGCCCACCTTTTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRSSATS*PTFCRV
Trigger: GACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCT...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCGCCACCACTGTGCACTaGACTGGTGTCATGCGCACA +
Preference number: 5 (lower is better)
Translates to: PGGHRGKRFRASGHIARCATTVH*TGVMRT
Trigger: TGTGCGCATGACACCAGTCAAGTGCACAGTGGTGGC...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGCCACCACTGTGCACTaGACTGGTGTCATGCGCACA +
Preference number: 5 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDATTVH*TGVMRT
Trigger: TGTGCGCATGACACCAGTCAAGTGCACAGTGGTGGC...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGGCCACCACTGTGCACTaGACTGGTGTCATGCGCACA +
Preference number: 5 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMATTVH*TGVMRT
Trigger: TGTGCGCATGACACCAGTCAAGTGCACAGTGGTGGC...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS CCA 90 bp GCTTCTGAGTGGGAAGATAAGGGAAATGTGTCAGGGAAAGGGGCCTaGAGATGTAGCTTAGGGCCAATCAGGGCGGTGGTGAGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ASEWEDKGNVSGKGA*RCSLGPIRAVVRSG
Trigger: GCCTGACCTCACCACCGCCCTGATTGGCCCTAAGCTACATCTCCAGGCCCCTTTCCCTGACACATTTCCCTTATCTTCCCACTCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAAAAGGGACGCTCCCCTaGAAGGGGCCAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGKGTLP*KGPTPV
Trigger: CACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTTT...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGCCGGAAGTCGAGGTaGAGATGCTCTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRSRKSR*RCSKPW
Trigger: CCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCT...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTGCCATCAGGGACAAATaGGAGGGGTCAGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAAIRDK*EGSVLS
Trigger: GGACAGCACTGACCCCTCCAATTTGTCCCTGATGGC...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCTTCCTTGCCCACCTTTaGCAGGGTCGTCTTGCGCAA +
Preference number: 5 (lower is better)
Translates to: PGGHRGKRFRASGHIARCFLAHL*QGRLAQ
Trigger: TTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAA...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCTTCCTTGCCCACCTTTaGCAGGGTCGTCTTGCGCAA +
Preference number: 5 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGFLAHL*QGRLAQ
Trigger: TTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAA...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAGCTCAGCCACTTCCTaGCCCACCTTTTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QVRCICLEGLPSHHTIVASSATS*PTFCRV
Trigger: GACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCT...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCACCACCTTGATCAGGTaGAAGAGCAGAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: PGGHRGKRFRASGHIARCTTLIR*KSRGRA
Trigger: GGCTCTGCCTCTGCTCTTCAACCTGATCAAGGTGGT...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGCTAGCACAGCTCGGTaGTGGGCAGAGAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIASTAR*WAERSP
Trigger: GGGGCTTCTCTCTGCCCACAACCGAGCTGTGCTAGC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAATCAGGGCCCAGGCTGTaGAGTTGCAAGCCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKSGPRL*SCKPSF
Trigger: GAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTGA...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGCCGTCAGCGGGTTGTaGGACAGCCGCAGTGTGGTA +
Preference number: 5 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIAVSGL*DSRSVV
Trigger: TACCACACTGCGGCTGTCCAACAACCCGCTGACGGC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGTGTCACCAGCACCGTaGTACGCCACGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAVSPAP*YATFSS
Trigger: GGAGCTGAACGTGGCGTACAACGGTGCTGGTGACAC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGTGTCACCAGCACCGTaGTACGCCACGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IAASQVHLPRGATKPSYHVSPAP*YATFSS
Trigger: GGAGCTGAACGTGGCGTACAACGGTGCTGGTGACAC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAACGCAGCAGCTGGGCCTaGCGCCAAGGATTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKRSSWA*RQGLRV
Trigger: CACCCTTAATCCTTGGCGCAAGGCCCAGCTGCTGCG...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACAGTCCAGAACCATCTaGCGCACCAGCGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKQSRTI*RTSVLL
Trigger: CAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATGCCATCAGGGACAAATaGGAGGGGTCAGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: IAASQVHLPRGATKPSYHAIRDK*EGSVLS
Trigger: GGACAGCACTGACCCCTCCAATTTGTCCCTGATGGC...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGTTTTGCAGGGTCGTCTaGCGCAAACCCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: PRGATKPSYHCGKGGMRMFCRVV*RKPSTM
Trigger: CATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAA...CATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCTTTTGCAGGGTCGTCTaGCGCAAACCCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: PGGHRGKRFRASGHIARCFCRVV*RKPSTM
Trigger: CATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAA...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAAGCTCAGCCACTTCCTaGCCCACCTTTTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGSSATS*PTFCRV
Trigger: GACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCT...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGACTCGTGGAACCACCTaGATCAGGTTGAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GASASRGYQAIIPLWQRGTRGTT*IRLKSR
Trigger: TCTGCTCTTCAACCTGATCAAGGTGGTTCCACGAGT...CCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGCACCAATGTGAGGGCATCCTCGGTGTCCACAGGTGAGCATAAGGCAGGAGGGACTCGTGGAACCACCTaGATCAGGTTGAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: STNVRASSVSTGEHKAGGTRGTT*IRLKSR
Trigger: TCTGCTCTTCAACCTGATCAAGGTGGTTCCACGAGT...CCCTCCTGCCTTATGCTCACCTGTGGACACCGAGGATGCCCTCACATTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGAGCCACCACTGTGCACTaGACTGGTGTCATGCGCACA +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGATTVH*TGVMRT
Trigger: TGTGCGCATGACACCAGTCAAGTGCACAGTGGTGGC...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATCCGCAGTGTGGTAATTaGGCACTGGTCATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: ASRGYQAIIPLWQRGHEDPQCGN*ALVMQQ
Trigger: TTGCTGCATGACCAGTGCCAAATTACCACACTGCGG...ATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCCCGCAGTGTGGTAATTaGGCACTGGTCATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: ASQVHLPRGATKPSYHCGPQCGN*ALVMQQ
Trigger: TTGCTGCATGACCAGTGCCAAATTACCACACTGCGG...GCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTGCCCGATCCCAGCTATaGAGGTTCCGCTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAARSQL*RFRWTS
Trigger: TGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGGC...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGCAAGCCATCATACCATaGTGGCAAAGGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRQAIIP*WQRGHE
Trigger: CTCATGCCCCCTTTGCCACAATGGTATGATGGCTTG...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTAAAGGGACGCTCCCCTaGAAGGGGCCAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSKGTLP*KGPTPV
Trigger: CACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTTT...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATAAAGGGACGCTCCCCTaGAAGGGGCCAACTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LNGEEACSISKPEALIHHKGTLP*KGPTPV
Trigger: CACTGGAGTTGGCCCCTTCAAGGGGAGCGTCCCTTT...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAGGGGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGTATTTGCGCAGCAGGTaGACGATGATAGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RGATKPSYHCGKGGMRMRYLRSR*TMIAAG
Trigger: ACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATA...CCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GTCAAACATGCCCTAGGAGGGCAACTGGCTCAGCTATGCCCATTCCTCTGCCTCTATTTGCGCAGCAGGTaGACGATGATAGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: VKHALGGQLAQLCPFLCLYLRSR*TMIAAG
Trigger: ACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATA...GAGGCAGAGGAATGGGCATAGCTGAGCCAGTTGCCCTCCTAGGGCATGTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTACCACCTTGATCAGGTaGAAGAGCAGAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LEIPDSVLVKHALGGQLATTLIR*KSRGRA
Trigger: GGCTCTGCCTCTGCTCTTCAACCTGATCAAGGTGGT...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAAGGTCTCGGAGGTCCTaGCAGGCCTCAGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSRSRRS*QASGPR
Trigger: CCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACCT...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAGCCGCCGTCAGCGGGTaGTTGGACAGCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSAAVSG*LDSRSV
Trigger: CACACTGCGGCTGTCCAACAACCCGCTGACGGCGGC...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAGTGTCACCAGCACCGTaGTACGCCACGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQVSPAP*YATFSS
Trigger: GGAGCTGAACGTGGCGTACAACGGTGCTGGTGACAC...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGCCCGATCCCAGCTATaGAGGTTCCGCTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: VLLAEWRGGMFHLQARSIARSQL*RFRWTS
Trigger: TGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGGC...AATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAAGCCGGAAGTCGAGGTaGAGATGCTCTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKSRKSR*RCSKPW
Trigger: CCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCATATTTGCGCAGCAGGTaGACGATGATAGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: QVRCICLEGLPSHHTIVAYLRSR*TMIAAG
Trigger: ACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATA...TGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TTGGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTTTTTGCAGGGTCGTCTaGCGCAAACCCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: LEIPDSVLVKHALGGQLAFCRVV*RKPSTM
Trigger: CATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAA...AGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGCTACCAAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAACCACCTTGATCAGGTaGAAGAGCAGAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GYQAIIPLWQRGHEDEEKTTLIR*KSRGRA
Trigger: GGCTCTGCCTCTGCTCTTCAACCTGATCAAGGTGGT...TTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTTGGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACCGCAGTGTGGTAATTaGGCACTGGTCATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKPQCGN*ALVMQQ
Trigger: TTGCTGCATGACCAGTGCCAAATTACCACACTGCGG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACAAGCCATCATACCATaGTGGCAAAGGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKQAIIP*WQRGHE
Trigger: CTCATGCCCCCTTTGCCACAATGGTATGATGGCTTG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACAAGCCATCATACCATaGTGGCAAAGGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGQAIIP*WQRGHE
Trigger: CTCATGCCCCCTTTGCCACAATGGTATGATGGCTTG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS CCA 90 bp AAGTGTGCATTGCAAGAGTATTGCAGGAAGGGATACATAGACGGATaGGAGGGAGAGAGAGAGAGGAGGAGGGACCACCGATGGAAGATG +
Preference number: 5 (lower is better)
Translates to: KCALQEYCRKGYIDG*EGERERRRDHRWKM
Trigger: CATCTTCCATCGGTGGTCCCTCCTCCTCTCTCTCTCTCCCTCCCATCCGTCTATGTATCCCTTCCTGCAATACTCTTGCAATGCACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAAAGCCGGAAGTCGAGGTaGAGATGCTCTAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQSRKSR*RCSKPW
Trigger: CCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCT...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AAGCCATCATACCATTGTGGCAAAGGGGGCATGAGGATGAGGAGAAAGCACCAATTCCTTGCCCACCTTTaGCAGGGTCGTCTTGCGCAA +
Preference number: 5 (lower is better)
Translates to: KPSYHCGKGGMRMRRKHQFLAHL*QGRLAQ
Trigger: TTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAA...TTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCACAATGGTATGATGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATACCACCTTGATCAGGTaGAAGAGCAGAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LNGEEACSISKPEALIHHTTLIR*KSRGRA
Trigger: GGCTCTGCCTCTGCTCTTCAACCTGATCAAGGTGGT...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCACGCAGCAGCTGGGCCTaGCGCCAAGGATTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSRSSWA*RQGLRV
Trigger: CACCCTTAATCCTTGGCGCAAGGCCCAGCTGCTGCG...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTCAAATGCCACATGCTTaGGTCCTTCTAGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAQMPHA*VLLAEW
Trigger: CCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTG...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GGAGATTCCAGACTCAGTCCTGGTCAAACATGCCCTAGGAGGGCAACTGGCTCACAAATGCCACATGCTTaGGTCCTTCTAGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: GDSRLSPGQTCPRRATGSQMPHA*VLLAEW
Trigger: CCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTG...TGAGCCAGTTGCCCTCCTAGGGCATGTTTGACCAGGACTGAGTCTGGAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCCGCAGTGTGGTAATTaGGCACTGGTCATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LNGEEACSISKPEALIHHPQCGN*ALVMQQ
Trigger: TTGCTGCATGACCAGTGCCAAATTACCACACTGCGG...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTGCTTCACCATCTTTAACTaGGAGATTCCAGACTCAGTC +
Preference number: 5 (lower is better)
Translates to: PGGHRGKRFRASGHIARCFTIFN*EIPDSV
Trigger: GACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAA...GCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAAGATGTGAGCCCCTTGGTGACACAGTCAGAGGCTCTTTGAGAGGAGGGGGACAAATGCCACATGCTTaGGTCCTTCTAGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: IRCEPLGDTVRGSLRGGGQMPHA*VLLAEW
Trigger: CCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTG...TCCCCCTCCTCTCAAAGAGCCTCTGACTGTGTCACCAAGGGGCTCACATCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp AGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTGTGGCAAACAAATGCCACATGCTTaGGTCCTTCTAGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: SQVHLPRGATKPSYHCGKQMPHA*VLLAEW
Trigger: CCATTCAGCTAGAAGGACCAAAGCATGTGGCATTTG...TTTGCCACAATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTCAAGCCATCATACCATaGTGGCAAAGGGGGCATGAG +
Preference number: 5 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSQAIIP*WQRGHE
Trigger: CTCATGCCCCCTTTGCCACAATGGTATGATGGCTTG...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS CCA 90 bp AGTCTGGAACCCCTATGTCAGAAAGTGGGAAGCCACTGGACAAACTaGTTTCACAGTGACCTATGTGCCGTCTTAACCTGCTTGACCCAA +
Preference number: 5 (lower is better)
Translates to: SLEPLCQKVGSHWTN*FHSDLCAVLTCLTQ
Trigger: TTGGGTCAAGCAGGTTAAGACGGCACATAGGTCACTGTGAAACCAGTTTGTCCAGTGGCTTCCCACTTTCTGACATAGGGGTTCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS CCA 90 bp TGTCCAGAAAGTCTGGAACCCCTATGTCAGAAAGTGGGAAGCCACTaGACAAACTGGTTTCACAGTGACCTATGTGCCGTCTTAACCTGC +
Preference number: 5 (lower is better)
Translates to: CPESLEPLCQKVGSH*TNWFHSDLCAVLTC
Trigger: GCAGGTTAAGACGGCACATAGGTCACTGTGAAACCAGTTTGTCCAGTGGCTTCCCACTTTCTGACATAGGGGTTCCAGACTTTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCATGTCTAGGGCAAAGGTaGGGCCAAACTGGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSCLGQR*GQTGAP
Trigger: AGGAGCGCCAGTTTGGCCCAACCTTTGCCCTAGACA...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATGCCACATGCTTTGGTCCTTCTAGCTGAATGGAGAGGAGGCATGTTCCATCTCTATTTGCGCAGCAGGTaGACGATGATAGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: MPHALVLLAEWRGGMFHLYLRSR*TMIAAG
Trigger: ACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATA...GAGATGGAACATGCCTCCTCTCCATTCAGCTAGAAGGACCAAAGCATGTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CTGAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATACTCGTGGAACCACCTaGATCAGGTTGAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: LNGEEACSISKPEALIHHTRGTT*IRLKSR
Trigger: TCTGCTCTTCAACCTGATCAAGGTGGTTCCACGAGT...ATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCAGCCCGATCCCAGCTATaGAGGTTCCGCTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSARSQL*RFRWTS
Trigger: TGAAGTCCAGCGGAACCTCAATAGCTGGGATCGGGC...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp TGCAAGCCAGGAGGCCACAGAGGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTTTCACCATCTTTAACTaGGAGATTCCAGACTCAGTC +
Preference number: 5 (lower is better)
Translates to: CKPGGHRGKRFRASGHIAFTIFN*EIPDSV
Trigger: GACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAA...AGCTATGTGACCACTGGCCCTAAACCTTTTCCCTCTGTGGCCTCCTGGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp GAATGGAGAGGAGGCATGTTCCATCTCCAAGCCCGAAGCATTGATTCACCATCTGAGCCTAAGGCTTCCTaGGGTTCTGCCTTATGTATC +
Preference number: 5 (lower is better)
Translates to: EWRGGMFHLQARSIDSPSEPKAS*GSALCI
Trigger: GATACATAAGGCAGAACCCAAGGAAGCCTTAGGCTC...AGATGGTGAATCAATGCTTCGGGCTTGGAGATGGAACATGCCTCCTCTCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409265.8
CDS TCA 90 bp CCTATGTCAGAAAGTGGGAAGCCACTGGACAAACTGGTTTCACAGTaGCCTATGTGCCGTCTTAACCTGCTTGACCCAACTTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: PMSESGKPLDKLVSQ*PMCRLNLLDPTLLS
Trigger: GCTCAACAAAGTTGGGTCAAGCAGGTTAAGACGGCACATAGGTCACTGTGAAACCAGTTTGTCCAGTGGCTTCCCACTTTCTGACATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS GCA 90 bp GCTCTCCTAGCGCTTTGTACATATAAGTGTGCATTGCAAGAGTATTaGAGGAAGGGATACATAGACGGATGGGAGGGAGAGAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ALLALCTYKCALQEY*RKGYIDGWEGERER
Trigger: CCTCTCTCTCTCTCCCTCCCATCCGTCTATGTATCCCTTCCTGCAATACTCTTGCAATGCACACTTATATGTACAAAGCGCTAGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS-3UTR CAA 90 bp CGAAGCATTGATTCACCATCTTTAACTTGGAGATTCCAGACTCAGTCCTGGTCATTCCTTGCCCACCTTTaGCAGGGTCGTCTTGCGCAA +
Preference number: 5 (lower is better)
Translates to: RSIDSPSLTWRFQTQSWSFLAHL*QGRLAQ
Trigger: TTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAA...TGACCAGGACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAATCAATGCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS-3UTR CAA 90 bp ATAGCAGCAAGTCAGGTGCATCTGCCTCGAGGGGCTACCAAGCCATCATACCATTTCACCATCTTTAACTaGGAGATTCCAGACTCAGTC +
Preference number: 5 (lower is better)
Translates to: IAASQVHLPRGATKPSYHFTIFN*EIPDSV
Trigger: GACTGAGTCTGGAATCTCCAAGTTAAAGATGGTGAA...ATGGTATGATGGCTTGGTAGCCCCTCGAGGCAGATGCACCTGACTTGCTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS CCA 72 bp CGAGAGGGGCCCGGTGCTCCGGAGCAGGCGCAGGGCTaGAACCCCGGCGCCACCCGTCCCGCCATCGTCCCC +
Preference number: 6 (lower is better)
Translates to: REGPGAPEQAQG*NPGATRPAIVP
Trigger: GGGGACGATGGCGGGACGGGTGGCGCCGGGGTTCCAGCCCTGCGCCTGCTCCGGAGCACCGGGCCCCTCTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
ENST00000474751.6
ENST00000481860.6
CDS GCA 72 bp CGGGCGCGAAAGAGGACGAGCCCAGGCACTCGGGCCTaGGGGGTCCTGGGACGAGGGGGTCAGCGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: RARKRTSPGTRA*GVLGRGGQREG
Trigger: CCCCTCTCGCTGACCCCCTCGTCCCAGGACCCCGCAGGCCCGAGTGCCTGGGCTCGTCCTCTTTCGCGCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409991.5
ENST00000474751.6
ENST00000481860.6
CDS CCA 72 bp GGACCGACTTCTGTCCTCCGCCCGCCTGCGCGGCCCTaGCACCTGGCAGCGGGCGCGAAAGAGGACGAGCCC +
Preference number: 6 (lower is better)
Translates to: GPTSVLRPPARP*HLAAGAKEDEP
Trigger: GGGCTCGTCCTCTTTCGCGCCCGCTGCCAGGTGCCAGGGCCGCGCAGGCGGGCGGAGGACAGAAGTCGGTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292199.6
CDS CCA 72 bp CTTCTGTCCTCCGCCCGCCTGCGCGGCCCTGGCACCTaGCAGCGGGCGCGAAAGAGGACGAGCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: LLSSARLRGPGT*QRARKRTSPGT
Trigger: AGTGCCTGGGCTCGTCCTCTTTCGCGCCCGCTGCCAGGTGCCAGGGCCGCGCAGGCGGGCGGAGGACAGAAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292199.6
CDS CAA 90 bp CGGGCAGCTCTGGCCAGGGCCAGGGCCGCTGTGTCACCAGCACCGTaGTACGCCACGTTCAGCTCCTGCAGCTGCCGGTTGCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: RAALARARAAVSPAP*YATFSSCSCRLRSS
Trigger: GCTGGACCGCAACCGGCAGCTGCAGGAGCTGAACGTGGCGTACAACGGTGCTGGTGACACAGCGGCCCTGGCCCTGGCCAGAGCTGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 72 bp AGAGGCGCTGGGGAACAGCCGTCCATGCCTCCCGGGTaGGGGAGCGCTATCTACCGAGCTTCCGTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: RGAGEQPSMPPG*GSAIYRASVVA
Trigger: CGCCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCCCAGCGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000525863.1
CDS GCA 72 bp CCAGCACCGTTGTACGCCACGTTCAGCTCCTGCAGCTaGCGGTTGCGGTCCAGCTGGGCAGCCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PAPLYATFSSCS*RLRSSWAASSS
Trigger: GGAGCTGCTGGCTGCCCAGCTGGACCGCAACCGGCAGCTGCAGGAGCTGAACGTGGCGTACAACGGTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 72 bp AGCTCGAAGACTTCATCCTCAGGGGGCTCATCTGGGTaGCGCCGGGGGCCCTCCACGCCCAGGATACTGGCG +
Preference number: 6 (lower is better)
Translates to: SSKTSSSGGSSG*RRGPSTPRILA
Trigger: CGCCAGTATCCTGGGCGTGGAGGGCCCCCGGCGCCACCCAGATGAGCCCCCTGAGGATGAAGTCTTCGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS GCA 72 bp GGCAGCCGGCTGAACCACTCAGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCAGTTGCAGAGGCGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GSRLNHSARFRR*RCIASVAEALG
Trigger: CCCCAGCGCCTCTGCAACTGAAGCTATACAGCGGCACCGCCGGAACCTGGCTGAGTGGTTCAGCCGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000525863.1
CDS GCA 72 bp TACTTTCGGGTGGCCTCGGGAACGCAGGGGGAGACTTaGCAGAACGCCCGCCATTCAGCGCCCAGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: YFRVASGTQGET*QNARHSAPSSV
Trigger: GACGGAGCTGGGCGCTGAATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGTTCCCGAGGCCACCCGAAAGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS CCA 72 bp CCGGGTGGGGGAGCGCTATCTACCGAGCTTCCGTGGTaGCGTATAAAGGCCCTAGGGGGCCCAAAGGGACGC +
Preference number: 6 (lower is better)
Translates to: PGGGALSTELPW*RIKALGGPKGR
Trigger: GCGTCCCTTTGGGCCCCCTAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000525863.1
CDS CAA 72 bp CTACTTTCGGGTGGCCTCGGGAACGCAGGGGGAGACTaGCCAGAACGCCCGCCATTCAGCGCCCAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: LLSGGLGNAGGD*PERPPFSAQLR
Trigger: ACGGAGCTGGGCGCTGAATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGTTCCCGAGGCCACCCGAAAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS CAA 90 bp ACAGCTCTCCTACTTTCGGGTGGCCTCGGGAACGCAGGGGGAGACTaGCCAGAACGCCCGCCATTCAGCGCCCAGCTCCGTCCCTCTCGT +
Preference number: 6 (lower is better)
Translates to: TALLLSGGLGNAGGD*PERPPFSAQLRPSR
Trigger: ACGAGAGGGACGGAGCTGGGCGCTGAATGGCGGGCGTTCTGGCAAGTCTCCCCCTGCGTTCCCGAGGCCACCCGAAAGTAGGAGAGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS TCA 72 bp AGAGGGCAGCCAGGTATTCCTGCATGGCGGGCACGGTaGACACGAAGGTGCCTGCACGCCCTGGCTCCACAC +
Preference number: 6 (lower is better)
Translates to: RGQPGIPAWRAR*TRRCLHALAPH
Trigger: GTGTGGAGCCAGGGCGTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGCAGGAATACCTGGCTGCCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS GCA 72 bp GCTTCAGTTGCAGAGGCGCTGGGGAACAGCCGTCCATaGCTCCCGGGTGGGGGAGCGCTATCTACCGAGCTT +
Preference number: 6 (lower is better)
Translates to: ASVAEALGNSRP*LPGGGALSTEL
Trigger: AAGCTCGGTAGATAGCGCTCCCCCACCCGGGAGGCATGGACGGCTGTTCCCCAGCGCCTCTGCAACTGAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000525863.1
CDS GCA 72 bp GCCAGCAGCTCCAGGCCTTCGTCCCCAAGGCCCGTGTaGAGCAGGGACAGGTGCGTCACTGAGGTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: ASSSRPSSPRPV*SRDRCVTEVFP
Trigger: AGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGACGAAGGCCTGGAGCTGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 72 bp CTCCCGGGTGGGGGAGCGCTATCTACCGAGCTTCCGTaGTGGCGTATAAAGGCCCTAGGGGGCCCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: LPGGGALSTELP*WRIKALGGPKG
Trigger: TCCCTTTGGGCCCCCTAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000525863.1
CDS CCA 72 bp GAAGAGCTCGAAGACTTCATCCTCAGGGGGCTCATCTaGGTGGCGCCGGGGGCCCTCCACGCCCAGGATACT +
Preference number: 6 (lower is better)
Translates to: EELEDFILRGLI*VAPGALHAQDT
Trigger: AGTATCCTGGGCGTGGAGGGCCCCCGGCGCCACCCAGATGAGCCCCCTGAGGATGAAGTCTTCGAGCTCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS CCA 72 bp CTCCCGGGTGGGGGAGCGCTATCTACCGAGCTTCCGTaGTGGCGTATAAAGGCCCTGGTCGCTGGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: LPGGGALSTELP*WRIKALVAGVL
Trigger: GAGCACTCCAGCGACCAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
CDS TCA 72 bp CTAGGACCGACTTCTGTCCTTACCCCTGGGCCTCCCTaGGGCGCGGTGTCCAGGGGATTCTTCCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LGPTSVLTPGPP*GAVSRGFFPLS
Trigger: GGACAGAGGGAAGAATCCCCTGGACACCGCGCCTCAGGGAGGCCCAGGGGTAAGGACAGAAGTCGGTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422249.5
CDS GCA 72 bp CCGGCAGCCGCCCATAACACCAGTCCAGAACCATCTTaGGCACCAGCGTGCTCTTGCCTGTGCCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: PAAAHNTSPEPS*APACSCLCPLS
Trigger: GGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTGGTGTTATGGGCGGCTGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp CCTTCGTCCCCAAGGCCCGTGTGCAGCAGGGACAGGTaGGTCACTGAGGTGTTTCCTGCCAGCCCCTCCATT +
Preference number: 6 (lower is better)
Translates to: PSSPRPVCSRDR*VTEVFPASPSI
Trigger: AATGGAGGGGCTGGCAGGAAACACCTCAGTGACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGACGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 72 bp ACGTGGACCGTGTCTAGGGCAAAGGTTGGGCCAAACTaGCGCTCCTCCCTGGGCAGCCGGCTGAACCACTCA +
Preference number: 6 (lower is better)
Translates to: TWTVSRAKVGPN*RSSLGSRLNHS
Trigger: TGAGTGGTTCAGCCGGCTGCCCAGGGAGGAGCGCCAGTTTGGCCCAACCTTTGCCCTAGACACGGTCCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp CCGGGTGGGGGAGCGCTATCTACCGAGCTTCCGTGGTaGCGTATAAAGGCCCTGGTCGCTGGAGTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: PGGGALSTELPW*RIKALVAGVLF
Trigger: GAAGAGCACTCCAGCGACCAGGGCCTTTATACGCCACCACGGAAGCTCGGTAGATAGCGCTCCCCCACCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
CDS CAA 90 bp AGGTGGTCAAGGAGCTCTGATGGGGGCAGCACCTGCCGGCCCAGCTaGCCCAGCTTCTTCTTGATGGCCTGGGCATTCTCCAGGGCATCC +
Preference number: 6 (lower is better)
Translates to: RWSRSSDGGSTCRPS*PSFFLMAWAFSRAS
Trigger: GGATGCCCTGGAGAATGCCCAGGCCATCAAGAAGAAGCTGGGCAAGCTGGGCCGGCAGGTGCTGCCCCCATCAGAGCTCCTTGACCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS TCA 72 bp CAGGTGGTCACGCTGAGCTGGTGTGGCAGAGACACCTaGACCGCCAACGGCATACCCGCAGTACGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: QVVTLSWCGRDT*TANGIPAVRLV
Trigger: AACCAGCCGTACTGCGGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTGACCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp TTCCTGCATGGCGGGCACGGTGAACACGAAGGTGCCTaGACGCCCTGGCTCCACACATGGGGCCAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: FLHGGHGEHEGA*TPWLHTWGQEK
Trigger: TTTTTCCTGGCCCCATGTGTGGAGCCAGGGCGTGCAGGCACCTTCGTGTTCACCGTGCCCGCCATGCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS GCA 72 bp CTCATCCAGGGCATGCCTTCCGCTGCCCAGCACAGCTaGCACCACTGTGCACTTGACTGGTGTCATGCGCAC +
Preference number: 6 (lower is better)
Translates to: LIQGMPSAAQHS*HHCALDWCHAH
Trigger: GTGCGCATGACACCAGTCAAGTGCACAGTGGTGGCAGCTGTGCTGGGCAGCGGAAGGCATGCCCTGGATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS CCA 72 bp CATAGCGGCCCACGTACTTGCTGGGGATACGGCCAATaGCAGAGGGCCGAGTGGTCACCAGAATGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: HSGPRTCWGYGQ*QRAEWSPECWP
Trigger: AGGCCAGCATTCTGGTGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp AGAGCATCTGCACCAGGTGGTCACGCTGAGCTGGTGTaGCAGAGACACCTGAACCGCCAACGGCATACCCGC +
Preference number: 6 (lower is better)
Translates to: RASAPGGHAELV*QRHLNRQRHTR
Trigger: GCGGGTATGCCGTTGGCGGTTCAGGTGTCTCTGCCACACCAGCTCAGCGTGACCACCTGGTGCAGATGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CAA 72 bp TCCTCCCCAACACGGCCCACGAGCTCAGCCACTTCCTaGCCCACCTTTTGCAGGGTCGTCTTGCGCAAACCC +
Preference number: 6 (lower is better)
Translates to: SSPTRPTSSATS*PTFCRVVLRKP
Trigger: GGGTTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCTCGTGGGCCGTGTTGGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS CAA 90 bp CTCCCCAACACGGCCCACGAGCTCAGCCACTTCCTTGCCCACCTTTaGCAGGGTCGTCTTGCGCAAACCCAGCACAATGTAGAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LPNTAHELSHFLAHL*QGRLAQTQHNVEGS
Trigger: GCTGCCCTCTACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCTCGTGGGCCGTGTTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS CAA 90 bp TTGATCAGGTTGAAGAGCAGAGGCAGAGCCCGCAGAGGCAGCAGCTaGGCCATGATGCCCAGTACCAGGCTGACGTCCTCCCCAACACGG +
Preference number: 6 (lower is better)
Translates to: LIRLKSRGRARRGSS*AMMPSTRLTSSPTR
Trigger: CCGTGTTGGGGAGGACGTCAGCCTGGTACTGGGCATCATGGCCAAGCTGCTGCCTCTGCGGGCTCTGCCTCTGCTCTTCAACCTGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS TCA 72 bp CTGAACCGCCAACGGCATACCCGCAGTACGGCTGGTTaGGGCGGAGCTGGAAGTAGAGCTTCTGCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: LNRQRHTRSTAG*GGAGSRASAGW
Trigger: CCAACCTGCAGAAGCTCTACTTCCAGCTCCGCCTCAACCAGCCGTACTGCGGGTATGCCGTTGGCGGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS TCA 72 bp TCTTCCAGATCCCGCAGTAGGAGCTCAAGGTGTCGCTaGACCCGGGCCCGATCCCAGCTATTGAGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: SSRSRSRSSRCR*TRARSQLLRFR
Trigger: GCGGAACCTCAATAGCTGGGATCGGGCCCGGGTTCAGCGACACCTTGAGCTCCTACTGCGGGATCTGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS GCA 72 bp CCAGAACCATCTTGCGCACCAGCGTGCTCTTGCCTGTaGCCACTGTCCCATACAGCACCACTGTCTGCACCC +
Preference number: 6 (lower is better)
Translates to: PEPSCAPACSCL*PLSHTAPLSAP
Trigger: GGGTGCAGACAGTGGTGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp AGGTCTTGCGGGAGGACACCCCCTCATAGGCCAACTTaGCCATGGTTCGGGCTGCATAGGCCATCAGGGACA +
Preference number: 6 (lower is better)
Translates to: RSCGRTPPHRPT*PWFGLHRPSGT
Trigger: TGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGCAAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp CACCACTGTGCACTTGACTGGTGTCATGCGCACACCTaGCAGGTTGAGCTGACGCAGGGAGCTGAGCACCTC +
Preference number: 6 (lower is better)
Translates to: HHCALDWCHAHT*QVELTQGAEHL
Trigger: GAGGTGCTCAGCTCCCTGCGTCAGCTCAACCTGGCAGGTGTGCGCATGACACCAGTCAAGTGCACAGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000469103.3
ENST00000481860.6
ENST00000525863.1
CDS GCA 72 bp TGGCCTGAGCCACCGCCTCCCGGCTTTTACCCACCATaGGCCCAAACACTCGTGGAACCACCTGTGACAGAA +
Preference number: 6 (lower is better)
Translates to: WPEPPPPGFYPP*AQTLVEPPVTE
Trigger: TTCTGTCACAGGTGGTTCCACGAGTGTTTGGGCGCATGGTGGGTAAAAGCCGGGAGGCGGTGGCTCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469103.3
CDS GCA 72 bp GGCAGCCGGCTGAACCACTCAGCCAGGTTCCGGCGGTaGCGCTGTATAGCTTCTGAGTGGGAAGATAAGGGA +
Preference number: 6 (lower is better)
Translates to: GSRLNHSARFRR*RCIASEWEDKG
Trigger: TCCCTTATCTTCCCACTCAGAAGCTATACAGCGGCACCGCCGGAACCTGGCTGAGTGGTTCAGCCGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS CCA 72 bp AACCGCAGATCTCACCATAGCGGCCCACGTACTTGCTaGGGATACGGCCAATGGCAGAGGGCCGAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: NRRSHHSGPRTC*GYGQWQRAEWS
Trigger: TGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCAGCAAGTACGTGGGCCGCTATGGTGAGATCTGCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp CCAAACTGGGTCCCAAACAGCTCTCCTACTTTCGGGTaGCCTCGGGAACGCAGGGGGAGACTTGCCAGAACG +
Preference number: 6 (lower is better)
Translates to: PNWVPNSSPTFG*PRERRGRLART
Trigger: CGTTCTGGCAAGTCTCCCCCTGCGTTCCCGAGGCCACCCGAAAGTAGGAGAGCTGTTTGGGACCCAGTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS CCA 72 bp GTGCTCTGCCAGGGCAACCCTCCCTCCAAGAGGGCTTaGGGGTGCAGGGCTGACAATTCTGCTGGGTTTTCA +
Preference number: 6 (lower is better)
Translates to: VLCQGNPPSKRA*GCRADNSAGFS
Trigger: TGAAAACCCAGCAGAATTGTCAGCCCTGCACCCCCAAGCCCTCTTGGAGGGAGGGTTGCCCTGGCAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469103.3
CDS CCA 72 bp TGCGGGAGGACACCCCCTCATAGGCCAACTTGCCCATaGTTCGGGCTGCATAGGCCATCAGGGACAAATTGG +
Preference number: 6 (lower is better)
Translates to: CGRTPPHRPTCP*FGLHRPSGTNW
Trigger: CCAATTTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp CCCCACTCCCAGGTCACTCACCGCAGTGTGGTAATTTaGCACTGGTCATGCAGCAACAGGTCTCGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PHSQVTHRSVVI*HWSCSNRSRRS
Trigger: GGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGTGAGTGACCTGGGAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481860.6
CDS CAA 72 bp GCCCCACTCCCAGGTCACTCACCGCAGTGTGGTAATTaGGCACTGGTCATGCAGCAACAGGTCTCGGAGGTC +
Preference number: 6 (lower is better)
Translates to: APLPGHSPQCGN*ALVMQQQVSEV
Trigger: GACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGTGAGTGACCTGGGAGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481860.6
CDS CAA 90 bp TCCGGGTCACTACAAAGTCCCGTGCCTGCCAGCCGGAAGTCGAGGTaGAGATGCTCTAAGCCATGGAGCACAAAGAGGAGGTGGGACCCA +
Preference number: 6 (lower is better)
Translates to: SGSLQSPVPASRKSR*RCSKPWSTKRRWDP
Trigger: TGGGTCCCACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGTAGTGACCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CAA 90 bp GTGGTAATTTGGCACTGGTCATGCAGCAACAGGTCTCGGAGGTCCTaGCAGGCCTCAGGGCCCAGGCTGTTGAGTTGCAAGCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: VVIWHWSCSNRSRRS*QASGPRLLSCKPSF
Trigger: GAAGCTGGGCTTGCAACTCAACAGCCTGGGCCCTGAGGCCTGCAAGGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS TCA 72 bp GGAAGATGTGCAGCAGCTGAAACTCCTCCTCCGTCCTaGTGCCAGCCTCCAGGCAGCCACAGACATCCTCTT +
Preference number: 6 (lower is better)
Translates to: GRCAAAETPPPS*CQPPGSHRHPL
Trigger: AAGAGGATGTCTGTGGCTGCCTGGAGGCTGGCATCAGGACGGAGGAGGAGTTTCAGCTGCTGCACATCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp ACCAGTCCAGAACCATCTTGCGCACCAGCGTGCTCTTaGCTGTGCCCACTGTCCCATACAGCACCACTGTCT +
Preference number: 6 (lower is better)
Translates to: TSPEPSCAPACS*LCPLSHTAPLS
Trigger: AGACAGTGGTGCTGTATGGGACAGTGGGCACAGGCAAGAGCACGCTGGTGCGCAAGATGGTTCTGGACTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp TTGCGCAGCAGGTTGACGATGATAGCAGCTGGTTCCTaGGGTTCCTCCGGGTCACTACAAAGTCCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: LRSRLTMIAAGS*GSSGSLQSPVP
Trigger: AGGCACGGGACTTTGTAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTCAACCTGCTGCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp CACCCCCTCATAGGCCAACTTGCCCATGGTTCGGGCTaGATAGGCCATCAGGGACAAATTGGAGGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: HPLIGQLAHGSG*IGHQGQIGGVS
Trigger: ACTGACCCCTCCAATTTGTCCCTGATGGCCTATGCAGCCCGAACCATGGGCAAGTTGGCCTATGAGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp GGCAGCCACAGACATCCTCTTCAGAGAAGTAGGTCTTaGGGGAGGACACCCCCTCATAGGCCAACTTGCCCA +
Preference number: 6 (lower is better)
Translates to: GSHRHPLQRSRS*GRTPPHRPTCP
Trigger: TGGGCAAGTTGGCCTATGAGGGGGTGTCCTCCCGCAAGACCTACTTCTCTGAAGAGGATGTCTGTGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS GCA 72 bp CAGCCACTTCCTTGCCCACCTTTTGCAGGGTCGTCTTaGGCAAACCCAGCACAATGTAGAGGGCAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: QPLPCPPFAGSS*ANPAQCRGQPG
Trigger: ACCTGGCTGCCCTCTACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAAGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS GCA 72 bp GGGAAAAGGTTTAGGGCCAGTGGTCACATAGCTAGGTaGCTGCCGCCAGTGTCTCAGCTTCCAGAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: GKRFRASGHIAR*LPPVSQLPELP
Trigger: GGGAAGCTCTGGAAGCTGAGACACTGGCGGCAGGCACCTAGCTATGTGACCACTGGCCCTAAACCTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
CDS CCA 72 bp TCATCAGGGGTACTCTCGCGGATCACAGGGTCAACGTaGACCGTGTCTAGGGCAAAGGTTGGGCCAAACTGG +
Preference number: 6 (lower is better)
Translates to: SSGVLSRITGST*TVSRAKVGPNW
Trigger: CCAGTTTGGCCCAACCTTTGCCCTAGACACGGTCCACGTTGACCCTGTGATCCGCGAGAGTACCCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000422249.5
ENST00000449394.5
ENST00000454811.5
ENST00000468765.1
ENST00000474751.6
ENST00000481860.6
ENST00000482180.5
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp ACTTGCTGGGGATACGGCCAATGGCAGAGGGCCGAGTaGTCACCAGAATGCTGGCCTGAGGCAGCATGTATT +
Preference number: 6 (lower is better)
Translates to: TCWGYGQWQRAE*SPECWPEAACI
Trigger: AATACATGCTGCCTCAGGCCAGCATTCTGGTGACCACTCGGCCCTCTGCCATTGGCCGTATCCCCAGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp GTCAGCGGGTTGTTGGACAGCCGCAGTGTGGTAATTTaGCACTGGTCATGCAGCAACAGGTCTCGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: VSGLLDSRSVVI*HWSCSNRSRRS
Trigger: GGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGCTGTCCAACAACCCGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS CCA 72 bp CGGTGTTCCTACAGGTCCAGAGCTCCTCCACCAAACTaGGTCCCAAACAGCTCTCCTACTTTCGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: RCSYRSRAPPPN*VPNSSPTFGWP
Trigger: AGGCCACCCGAAAGTAGGAGAGCTGTTTGGGACCCAGTTTGGTGGAGGAGCTCTGGACCTGTAGGAACACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409109.6
ENST00000468765.1
CDS CAA 72 bp ACGGCCCACGAGCTCAGCCACTTCCTTGCCCACCTTTaGCAGGGTCGTCTTGCGCAAACCCAGCACAATGTA +
Preference number: 6 (lower is better)
Translates to: TAHELSHFLAHL*QGRLAQTQHNV
Trigger: TACATTGTGCTGGGTTTGCGCAAGACGACCCTGCAAAAGGTGGGCAAGGAAGTGGCTGAGCTCGTGGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000525863.1
CDS CAA 72 bp CGTCAGCGGGTTGTTGGACAGCCGCAGTGTGGTAATTaGGCACTGGTCATGCAGCAACAGGTCTCGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RQRVVGQPQCGN*ALVMQQQVSEV
Trigger: GACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGCTGTCCAACAACCCGCTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS GCA 72 bp TTGGACAGCCGCAGTGTGGTAATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGGTCCTTGCAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LDSRSVVIWHWS*SNRSRRSLQAS
Trigger: TGAGGCCTGCAAGGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGCTGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000525863.1
CDS GCA 72 bp TGCCAGGGCAACCCTCCCTCCAAGAGGGCTTGGGGGTaGAGGGCTGACAATTCTGCTGGGTTTTCAATAACT +
Preference number: 6 (lower is better)
Translates to: CQGNPPSKRAWG*RADNSAGFSIT
Trigger: AGTTATTGAAAACCCAGCAGAATTGTCAGCCCTGCACCCCCAAGCCCTCTTGGAGGGAGGGTTGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469103.3
CDS GCA 72 bp GTCACTCACCGCAGTGTGGTAATTTGGCACTGGTCATaGAGCAACAGGTCTCGGAGGTCCTTGCAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: VTHRSVVIWHWS*SNRSRRSLQAS
Trigger: TGAGGCCTGCAAGGACCTCCGAGACCTGTTGCTGCATGACCAGTGCCAAATTACCACACTGCGGTGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481860.6
CDS CAA 72 bp CTACAAAGTCCCGTGCCTGCCAGCCGGAAGTCGAGGTaGAGATGCTCTAAGCCATGGAGCACAAAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LQSPVPASRKSR*RCSKPWSTKRR
Trigger: CCTCCTCTTTGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS TCA 72 bp TACAAAGTCCCGTGCCTGCCAGCCGGAAGTCGAGGTTaGGATGCTCTAAGCCATGGAGCACAAAGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: YKVPCLPAGSRG*DALSHGAQRGG
Trigger: ACCTCCTCTTTGTGCTCCATGGCTTAGAGCATCTCAACCTCGACTTCCGGCTGGCAGGCACGGGACTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp CATGTATTTGCGCAGCAGGTTGACGATGATAGCAGCTaGTTCCTGCGGTTCCTCCGGGTCACTACAAAGTCC +
Preference number: 6 (lower is better)
Translates to: HVFAQQVDDDSS*FLRFLRVTTKS
Trigger: GGACTTTGTAGTGACCCGGAGGAACCGCAGGAACCAGCTGCTATCATCGTCAACCTGCTGCGCAAATACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000292199.6
ENST00000409109.6
ENST00000409265.8
ENST00000409991.5
ENST00000481860.6
ENST00000524562.1
ENST00000525863.1
CDS CCA 72 bp TGTCCTTCAGGCAGAGACCTGAGCCTAAGGCTTCCTTaGGTTCTGCCTTATGTATCCGGTCCTCTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: CPSGRDLSLRLP*VLPYVSGPLQS
Trigger: GCTCTGAAGAGGACCGGATACATAAGGCAGAACCCAAGGAAGCCTTAGGCTCAGGTCTCTGCCTGAAGGACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409265.8
ENST00000454811.5
CDS CCA 72 bp CTAGGACCGACTTCTGTCCTGAGCCTAAGGCTTCCTTaGGTTCTGCCTTATGTATCCGGTCCTCTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: LGPTSVLSLRLP*VLPYVSGPLQS
Trigger: GCTCTGAAGAGGACCGGATACATAAGGCAGAACCCAAGGAAGCCTTAGGCTCAGGACAGAAGTCGGTCCTAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449394.5
CDS CAA 72 bp CTGTCCTTCAGGCAGAGACCTGAGCCTAAGGCTTCCTaGGGTTCTGCCTTATGTATCCGGTCCTCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: LSFRQRPEPKAS*GSALCIRSSSE
Trigger: CTCTGAAGAGGACCGGATACATAAGGCAGAACCCAAGGAAGCCTTAGGCTCAGGTCTCTGCCTGAAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409265.8
ENST00000454811.5
CDS CAA 90 bp GGTCCTCTTCAGAGCCCAGACCTATGTGTGTGGCTGCTGGTAACCTaGGTTAAGAAAGAAGGAAGAATGGGGGCTGAAGGACAACTTGCA +
Preference number: 6 (lower is better)
Translates to: GPLQSPDLCVWLLVT*VKKEGRMGAEGQLA
Trigger: TGCAAGTTGTCCTTCAGCCCCCATTCTTCCTTCTTTCTTAACCAAGGTTACCAGCAGCCACACACATAGGTCTGGGCTCTGAAGAGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454811.5
CDS CCA 72 bp AGTCTGGAACCCCTATGTCAGAAAGTGGGAAGCCACTaGACAAACTGGTTTCACAGTGACCTATGTGCCGTC +
Preference number: 6 (lower is better)
Translates to: SLEPLCQKVGSH*TNWFHSDLCAV
Trigger: GACGGCACATAGGTCACTGTGAAACCAGTTTGTCCAGTGGCTTCCCACTTTCTGACATAGGGGTTCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS TCA 72 bp AATATGTCACCCTGTGAAGCTGAATCCACAGGATGGTaGATAAACAGATGGGCTCAGTGCTCTGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: NMSPCEAESTGW*INRWAQCSARA
Trigger: TGCCCTGGCAGAGCACTGAGCCCATCTGTTTATTCACCATCCTGTGGATTCAGCTTCACAGGGTGACATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469103.3
CDS TCA 72 bp GAAAGTGGGAAGCCACTGGACAAACTGGTTTCACAGTaGCCTATGTGCCGTCTTAACCTGCTTGACCCAACT +
Preference number: 6 (lower is better)
Translates to: ESGKPLDKLVSQ*PMCRLNLLDPT
Trigger: AGTTGGGTCAAGCAGGTTAAGACGGCACATAGGTCACTGTGAAACCAGTTTGTCCAGTGGCTTCCCACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS CAA 90 bp AGGGATGGTATGGCTCTCCTAGCGCTTTGTACATATAAGTGTGCATaGCAAGAGTATTGCAGGAAGGGATACATAGACGGATGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RDGMALLALCTYKCA*QEYCRKGYIDGWEG
Trigger: TCCCTCCCATCCGTCTATGTATCCCTTCCTGCAATACTCTTGCAATGCACACTTATATGTACAAAGCGCTAGGAGAGCCATACCATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS GCA 72 bp GCGCTTTGTACATATAAGTGTGCATTGCAAGAGTATTaGAGGAAGGGATACATAGACGGATGGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: ALCTYKCALQEY*RKGYIDGWEGE
Trigger: CTCTCCCTCCCATCCGTCTATGTATCCCTTCCTGCAATACTCTTGCAATGCACACTTATATGTACAAAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1
CDS CAA 72 bp ATGGCTCTCCTAGCGCTTTGTACATATAAGTGTGCATaGCAAGAGTATTGCAGGAAGGGATACATAGACGGA +
Preference number: 6 (lower is better)
Translates to: MALLALCTYKCA*QEYCRKGYIDG
Trigger: TCCGTCTATGTATCCCTTCCTGCAATACTCTTGCAATGCACACTTATATGTACAAAGCGCTAGGAGAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524562.1