RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLRP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000171487

Ensembl transcript IDs: ENST00000390649.8, ENST00000597673.1, ENST00000621651.4

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGAATCATTCTCCATCTTaGAGAAGGAACTCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQNHSPS*RRNSQV
Trigger: CACCTGGGAGTTCCTTCTCAAAGATGGAGAATGATT...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTCCCCCACCACGTCCTaGAGCTGCAGGGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSPTTS*SCRATQ
Trigger: CTGCGTGGCCCTGCAGCTGCAGGACGTGGTGGGGGA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACTGCCCAGGTCCAGCTaGCGCAGGTGTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGALPRSS*RRCGWV
Trigger: CACCCACCCACACCTGCGGCAGCTGGACCTGGGCAG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACCCACGGCGGGCACCTaGCACTGGTCGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAPTAGT*HWSSSS
Trigger: TGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGGG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGCAGGGCCACGCAGATaGGAGAGCCCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSAGPRR*ESPRRA
Trigger: TGCCCGCCGTGGGCTCTCTCATCTGCGTGGCCCTGC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCTCAAGCTCCGGTTGCTaGCGAGGGCTGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRISSSGC*RGLRPD
Trigger: GTCTGGCCTCAGCCCTCGTCAGCAACCGGAGCTTGA...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTCCGTCACCGGAGCCTaGGAGTCTGGCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSVTGA*ESGHSL
Trigger: CAGGGAGTGGCCAGACTCCCAGGCTCCGGTGACGGA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTGTTGCTGACGAGGGCTaGGGCCAGACTCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRVADEG*GQTLAT
Trigger: GGTTGCCAGAGTCTGGCCTCAGCCCTCGTCAGCAAC...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACCCGCTCTGTCAGGATaGTGCTGCCCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAPALSG*CCPGPA
Trigger: AGCTGGACCTGGGCAGCAGCATCCTGACAGAGCGGG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCCCGCTCTGTCAGGATaGTGCTGCCCAGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRPALSG*CCPGPA
Trigger: AGCTGGACCTGGGCAGCAGCATCCTGACAGAGCGGG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCAGGCCTGTGAGCGTTTaGTTGAAGGGGGCGACGCTC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIRPVSV*LKGATL
Trigger: GAGCGTCGCCCCCTTCAACCAAACGCTCACAGGCCT...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACAGCTGCCGCAGGTGTaGGTGGGTGCCAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAQLPQV*VGAKHG
Trigger: TCCATGCTTGGCACCCACCCACACCTGCGGCAGCTG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCCCACTGCTCCTCAATaGGGGTCTTATCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIPTAPQ*GSYPAS
Trigger: GGATGCGGGATAAGACCCTCATTGAGGAGCAGTGGG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTGTTGCTGACGAGGGCTaGGGCCAGACTCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFVADEG*GQTLAT
Trigger: GGTTGCCAGAGTCTGGCCTCAGCCCTCGTCAGCAAC...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCGTGTCCAGGTGGCACTaGTTCAGCATCAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIVSRWH*FSISLC
Trigger: GCAGAGGCTGATGCTGAATCAGTGCCACCTGGACAC...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGCGTGCAGAACCACCGTaGGAGGCCGGAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCERAEPP*EAGSPT
Trigger: GGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACG...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGCTGCCCAGGTCCAGCTaGCGCAGGTGTGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCELPRSS*RRCGWV
Trigger: CACCCACCCACACCTGCGGCAGCTGGACCTGGGCAG...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACGGAGCCTGGGAGTCTaGCCACTCCCTGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGARSLGV*PLPGDE
Trigger: TTCATCTCCAGGGAGTGGCCAGACTCCCAGGCTCCG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCGGAGCCTGGGAGTCTaGCCACTCCCTGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGRSLGV*PLPGDE
Trigger: TTCATCTCCAGGGAGTGGCCAGACTCCCAGGCTCCG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATCCGTCACCGGAGCCTaGGAGTCTGGCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSSVTGA*ESGHSL
Trigger: CAGGGAGTGGCCAGACTCCCAGGCTCCGGTGACGGA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAAGGCCTGTGAGCGTTTaGTTGAAGGGGGCGACGCTC +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGARPVSV*LKGATL
Trigger: GAGCGTCGCCCCCTTCAACCAAACGCTCACAGGCCT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCAGAGGGCAGAGAGCTaGCTCGATTTCCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGQRAES*LDFQAL
Trigger: GAGGGCCTGGAAATCGAGCCAGCTCTCTGCCCTCTG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCAGCTGCCGCAGGTGTaGGTGGGTGCCAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFQLPQV*VGAKHG
Trigger: TCCATGCTTGGCACCCACCCACACCTGCGGCAGCTG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCTCTTTCCTCCAGATTaGGACAGCGCCGGACCACGC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFLFPPD*DSAGPR
Trigger: GCGTGGTCCGGCGCTGTCTCAATCTGGAGGAAAGAG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGTGGCATTAGGCTGCTaGCCCAACAGAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAVALGC*PNRETQ
Trigger: CTGGGTCTCTCTGTTGGGTCAGCAGCCTAATGCCAC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCACGCGGCGGTGAGATaGCACTTTACCAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGHAAVR*HFTNSR
Trigger: CCTGGAGTTGGTAAAGTGTCATCTCACCGCCGCGTG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCTCTCCTTCTTCCGCTaGATCTCTCTAACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRILSFFR*ISLTGR
Trigger: CCTCCCCGTTAGAGAGATGCAGCGGAAGAAGGAGAG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCTCCCCCACCACGTCCTaGAGCTGCAGGGCCACGCAG +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQISPTTS*SCRATQ
Trigger: CTGCGTGGCCCTGCAGCTGCAGGACGTGGTGGGGGA...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCAGTGCAGAAGCTTCTaGTTCACCCCCAGGGGAACG +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRQCRSF*FTPRGT
Trigger: CGTTCCCCTGGGGGTGAAGCAGAAGCTTCTGCACTG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCATCTTGCAGGTGGGATaGCTCAGCTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIILQVG*LSLAHR
Trigger: CCTGTGTGCCAAGCTGAGGCATCCCACCTGCAAGAT...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCGGGGCTTGAGTAGCTaGACTTCCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGRGLSS*TSSSSF
Trigger: GAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGCGGGCACCTGGCACTaGTCGAGCAGCTCACGGTTG +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEAGTWH*SSSSRL
Trigger: CAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCACACAGGGTCTTCATaGCCCGCTCTGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRHTGSS*PALSGC
Trigger: GCATCCTGACAGAGCGGGCCATGAAGACCCTGTGTG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACACACAGGGTCTTCATaGCCCGCTCTGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAHTGSS*PALSGC
Trigger: GCATCCTGACAGAGCGGGCCATGAAGACCCTGTGTG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCGCACCAGGTTTAGACTaGTCAGATGCCGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIAPGLD*SDAGCR
Trigger: CCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGC...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTTTTCTGGTCGGGACATaGTCTCCGTCACCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFFLVGT*SPSPEP
Trigger: AGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAA...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCGCTCACGGTTGTTCATaGTCGCACGCAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGAHGCS*SHATLV
Trigger: CACAAGGGTTGCGTGCGATCATGAACAACCGTGAGC...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGCAGGGCCACGCAGATaGGAGAGCCCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSAGPRR*ESPRRA
Trigger: TGCCCGCCGTGGGCTCTCTCATCTGCGTGGCCCTGC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCCACGCCTCGAGGGGTaGGCTGATGAAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGPRLEG*ADETQK
Trigger: CTTTTGTGTTTCATCAGCTCACCCCTCGAGGCGTGG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCAGGTGCGTCAGCCATaGGTTACCCATAAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRQVRQP*VTHKRK
Trigger: CTTGCGCTTATGGGTAACTCATGGCTGACGCACCTG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCGCACCAGCCAACGTTTaGATTTCCGGCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGAPANV*ISGQSA
Trigger: TGCTGACTGGCCGGAAATGCAAACGTTGGCTGGTGC...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGGTGAACGGAGGCTaGTTCTCAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGRVNGG*FSAQSL
Trigger: CAAAGACTGGGCTGAGAAGCAGCCTCCGTTCACCCT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTAACACAAAAGCGGCGTaGAGGCCTGTGAGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRNTKAA*RPVSVW
Trigger: CCAAACGCTCACAGGCCTGCACGCCGCTTTTGTGTT...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCATCTTGCAGGTGGGATaGCTCAGCTTGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGILQVG*LSLAHR
Trigger: CCTGTGTGCCAAGCTGAGGCATCCCACCTGCAAGAT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCACGATTCTCCAGAGGTaGTGCACACCAGGGGTAATC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRITILQR*CTPGVI
Trigger: GATTACCCCTGGTGTGCAGCACCTCTGGAGAATCGT...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGCTCTTCAGGTGTCTaGTCCTCGAGATCACACAGG +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAGSSGV*SSRSHR
Trigger: CCTGTGTGATCTCGAGGAGCAGACACCTGAAGAGCC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCAGAAGTCAGTCCACATaGCTTCAACCCGAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIRSQST*LQPESR
Trigger: GCGAGACTCGGGTTGAAGGCATGTGGACTGACTTCT...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGTCCAGGGTGTCTCCTaGGGTGGTGGCATTAGGCTG +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSVQGVS*GGGIRL
Trigger: CAGCCTAATGCCACCACCCCAGGAGACACCCTGGAC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTTTCTGCAGGGCGCACTaGGAGACTCTCAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRFCRAH*ETLKAS
Trigger: TGATGCCTTGAGAGTCTCCCAGTGCGCCCTGCAGAA...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTGAAGCCCCACCGGTCTaGATCAAAAGCACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFEAPPV*IKSTSQ
Trigger: TTGGCTGGTGCTTTTGATTCAGACCGGTGGGGCTTC...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTACACGACCTCTGACTTaGGCTTCTCTGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFTRPLT*ASLCPR
Trigger: ACGTGGGCACAGAGAAGCTCAAGTCAGAGGTCGTGT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCACGCCTCGAGGGGTaGGCTGATGAAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFPRLEG*ADETQK
Trigger: CTTTTGTGTTTCATCAGCTCACCCCTCGAGGCGTGG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCGTCACCGTCAAACACTaGCTTCCTATTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIVTVKH*LPIPHS
Trigger: GGAGTGTGGAATAGGAAGTCAGTGTTTGACGGTGAC...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGTGGCATTAGGCTGCTaGCCCAACAGAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSVALGC*PNRETQ
Trigger: CTGGGTCTCTCTGTTGGGTCAGCAGCCTAATGCCAC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTCAAGCTCCGGTTGCTaGCGAGGGCTGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQSSSGC*RGLRPD
Trigger: GTCTGGCCTCAGCCCTCGTCAGCAACCGGAGCTTGA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCACAGCACGCGGCGGTaGGATGACACTTTACCAACT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFHSTRR*DDTLPT
Trigger: AGTTGGTAAAGTGTCATCTCACCGCCGCGTGCTGTG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTTTACGACTCGGGGCTTaGGTAGCTGCACTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFLRLGA*VAALPP
Trigger: TGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAA...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCATTTCATGTCATCCCGTaGCTTCTCCGAGAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAFHVIP*LLREGS
Trigger: CGAACCCTCTCGGAGAAGGCACGGGATGACATGAAA...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCGTGCAGAACCACCGTaGGAGGCCGGAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHRAEPP*EAGSPT
Trigger: GGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCTCTCCTTCTTCCGCTaGATCTCTCTAACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFLSFFR*ISLTGR
Trigger: CCTCCCCGTTAGAGAGATGCAGCGGAAGAAGGAGAG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGACCACGTCCTGCAGCTaGAGGGCCACGCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCETTSCS*RATQMR
Trigger: TCTCATCTGCGTGGCCCTGCAGCTGCAGGACGTGGT...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTAACACAAAAGCGGCGTaGAGGCCTGTGAGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFNTKAA*RPVSVW
Trigger: CCAAACGCTCACAGGCCTGCACGCCGCTTTTGTGTT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCACAGTGCAGAAGCTTCTaGTTCACCCCCAGGGGAACG +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSQCRSF*FTPRGT
Trigger: CGTTCCCCTGGGGGTGAAGCAGAAGCTTCTGCACTG...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCAACAGAGAGACCCAGTaGAGAAGCTTCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRINRETQ*RSFCFT
Trigger: GGTGAAGCAGAAGCTTCTGCACTGGGTCTCTCTGTT...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTGCAGGTGTGGGTGGGTaGCAAGCATGGAGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFAGVGG*QAWSRN
Trigger: ATTTCTGCTCCATGCTTGGCACCCACCCACACCTGC...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTCAGGGTCTGTATCTTaGAGGTGGGATGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSGSVS*RWDASA
Trigger: AGCTGAGGCATCCCACCTGCAAGATACAGACCCTGA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAATGCTAAGGCTCAGGTaGGTCAGCCATGAGTTACCC +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAMLRLR*VSHELP
Trigger: GGGTAACTCATGGCTGACGCACCTGAGCCTTAGCAT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTTGGTCAGATGCCGGTTaGAGGAAAGGGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFWSDAG*RKGPRR
Trigger: TCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCA...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCGAACAACAGCCTTTCTaGTCGGGACATGATCTCCGT +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIEQQPF*SGHDLR
Trigger: ACGGAGATCATGTCCCGACCAGAAAGGCTGTTGTTC...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCCCACGGCGGGCACCTaGCACTGGTCGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHPTAGT*HWSSSS
Trigger: TGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGGG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGTCCAGGGTGTCTCCTaGGGTGGTGGCATTAGGCTG +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEVQGVS*GGGIRL
Trigger: CAGCCTAATGCCACCACCCCAGGAGACACCCTGGAC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTGGGTGCCAAGCATaGAGCAGAAATCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAGGCQA*SRNLPT
Trigger: AGTGGGAAGATTTCTGCTCCATGCTTGGCACCCACC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTCTGTATCTTGCAGGTaGGATGCCTCAGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSVSCR*DASAWH
Trigger: GTGCCAAGCTGAGGCATCCCACCTGCAAGATACAGA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCATCCCCAGGCTGTTGTTaGATAGGCACAGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGASPGCC*IGTGVS
Trigger: TGACACACCTGTGCCTATCCAACAACAGCCTGGGGA...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCGATTTCCCAATTCCTaGCTTTCCGTGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRRFPNS*LSVQNH
Trigger: GTGGTTCTGCACGGAAAGTCAGGAATTGGGAAATCG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCTCTTTCCTCCAGATTaGGACAGCGCCGGACCACGC +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQILFPPD*DSAGPR
Trigger: GCGTGGTCCGGCGCTGTCTCAATCTGGAGGAAAGAG...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCGAGTCCTTGAACCATaGGGTCGTCACCGTCAAACA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFRVLEP*GRHRQT
Trigger: TGTTTGACGGTGACGACCTCATGGTTCAAGGACTCG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGGTTACGGTTGGCCATaGCGATTCTCCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSGYGWP*RFSRGA
Trigger: AGCACCTCTGGAGAATCGTCATGGCCAACCGTAACC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGGCAACCCGTGGCTGTaGTGCCACAGTCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQGNPWL*CHSPPV
Trigger: TACTGGAGGACTGTGGCATCACAGCCACGGGTTGCC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCTGGCACTTTTTCCTTaGTTGGTCCTTGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRILALFP*LVLGQS
Trigger: TGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAAGGGTGAACGGAGGCTaGTTCTCAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSRVNGG*FSAQSL
Trigger: CAAAGACTGGGCTGAGAAGCAGCCTCCGTTCACCCT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCGAGGCAGAAGGAAGATaGTATCAAGTCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIEAEGR*YQVQVL
Trigger: CAGAACCTGGACTTGATAGCATCTTCCTTCTGCCTC...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACGCAAATACGGACAGTaGTGGAGGCAGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGARKYGQ*WRQKED
Trigger: ATCTTCCTTCTGCCTCCAGCACTGTCCGTATTTGCG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTACGATTCTCCAGAGGTaGTGCACACCAGGGGTAATC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFTILQR*CTPGVI
Trigger: GATTACCCCTGGTGTGCAGCACCTCTGGAGAATCGT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATCCAGTATCAGCTTCTaGAGGGCGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSSSISF*RAHWET
Trigger: AGTCTCCCAGTGCGCCCTGCAGAAGCTGATACTGGA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTTTCAGCATCAGCCTCTaGAGACTACAGTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFFSISL*RLQWGS
Trigger: GCTTCCCCACTGTAGTCTGCAGAGGCTGATGCTGAA...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAAAGGGCCAAGGAGAGTaGCTCACAGCAATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAKGQGE*LTAIRS
Trigger: ACTTCTGATTGCTGTGAGGCACTCTCCTTGGCCCTT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATGGTCAGATGCCGGTTaGAGGAAAGGGCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSWSDAG*RKGPRR
Trigger: TCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGCGGGCACCTGGCACTaGTCGAGCAGCTCACGGTTG +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHAGTWH*SSSSRL
Trigger: CAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCTCACAGTGGCTGTCTaGGAGAAGGATGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRLTVAV*EKDVHV
Trigger: CACATGAACATCCTTCTCCCAGACAGCCACTGTGAG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATTCTGCAGGGCGCACTaGGAGACTCTCAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSFCRAH*ETLKAS
Trigger: TGATGCCTTGAGAGTCTCCCAGTGCGCCCTGCAGAA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCTGGAGATGACAAGATaGTTCTCTCATGACCTCGCA +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRILEMTR*FSHDLA
Trigger: TGCGAGGTCATGAGAGAACCATCTTGTCATCTCCAG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTATCTTGATACAAGGCTaGGAGCTCAGGTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFILIQG*ELRFWG
Trigger: CCCCCAAAACCTGAGCTCTCAGCCTTGTATCAAGAT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCTTTCTGGTCGGGACATaGTCTCCGTCACCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIFLVGT*SPSPEP
Trigger: AGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAA...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTGCTTTGTGTCATTGTTaGGGACAGAGCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFALCHC*GQSPGH
Trigger: ATGACCTGGGCTCTGTCCTCAACAATGACACAAAGC...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTGTCACCGTCAAACACTaGCTTCCTATTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFVTVKH*LPIPHS
Trigger: GGAGTGTGGAATAGGAAGTCAGTGTTTGACGGTGAC...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCACGAGTCCTTGAACCATaGGGTCGTCACCGTCAAACA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSRVLEP*GRHRQT
Trigger: TGTTTGACGGTGACGACCTCATGGTTCAAGGACTCG...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATGACTCCCCGAGTCCTTaGACCATGAGGTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYDSPSP*TMRSSP
Trigger: CGGTGACGACCTCATGGTTCAAGGACTCGGGGAGTC...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAAGAAGGATGTTCATGTaGAACAGAGCACGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGARRMFM*NRARSS
Trigger: TGAGCTCCGTGCTCTGTTTCACATGAACATCCTTCT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTAGAAGTCCTGGAGACTaGGGTGGAAGAAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFRSPGD*GGRRCS
Trigger: ACTACACCTTCTTCCACCTCAGTCTCCAGGACTTCT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGCCCACTGCTCCTCAATaGGGGTCTTATCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQPTAPQ*GSYPAS
Trigger: GGATGCGGGATAAGACCCTCATTGAGGAGCAGTGGG...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGGGTGCCTCCCAAGTTaGGGGATCTTAGGTTACGGT +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEGCLPS*GILGYG
Trigger: ACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTAAGATGGTTCTCTCATaGCCTCGCACAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRKMVLS*PRTEAS
Trigger: TGAAGCTTCTGTGCGAGGTCATGAGAGAACCATCTT...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCACGCGGCGGTGAGATaGCACTTTACCAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIHAAVR*HFTNSR
Trigger: CCTGGAGTTGGTAAAGTGTCATCTCACCGCCGCGTG...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGCACAGCACGCGGCGGTaGGATGACACTTTACCAACT +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEHSTRR*DDTLPT
Trigger: AGTTGGTAAAGTGTCATCTCACCGCCGCGTGCTGTG...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCTCATTCCTTTGGGACTaGAGTTATTCTGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRISFLWD*SYSAPG
Trigger: ACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGA...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCATCATTCTCCATCTTTaGGAAGGAACTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGIILHL*EGTPRC
Trigger: GCACCTGGGAGTTCCTTCTCAAAGATGGAGAATGAT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCTGAGTCCTATGACTTaGAGGTCTCTAGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRILSPMT*RSLAFK
Trigger: TTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTAGCCCAGGCCAGCGATaGTCCATAATACTCATGCAA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFSPGQR*SIILMQ
Trigger: TTGCATGAGTATTATGGAGCATCGCTGGCCTGGGCT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCGTGGATATGGAAGCCTaGCTGTTTAAGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGVDMEA*LFKLHG
Trigger: TCCATGGAGCTTAAACAGGCAGGCTTCCATATCCAC...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGCTCTGTCAGGATGCTaGTGCCCAGGTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHALSGC*CPGPAA
Trigger: GGCAGCTGGACCTGGGCAGCAGCATCCTGACAGAGC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTGTCACCTTGTTTCCTaGCAGGCTCAGAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGCHLVS*QAQRFQ
Trigger: CTGAAATCTCTGAGCCTGGCAGGAAACAAGGTGACA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTTGTCACCTTGTTTCCTaGCAGGCTCAGAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRCHLVS*QAQRFQ
Trigger: CTGAAATCTCTGAGCCTGGCAGGAAACAAGGTGACA...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTACCCATAAGCGCAAGTaGAAGAAAACCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFTHKRK*KKTTAS
Trigger: GCTGGCTGTGGTTTTCTTGCACTTGCGCTTATGGGT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGGCTCTTCAGGTGTCTaGTCCTCGAGATCACACAGG +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEGSSGV*SSRSHR
Trigger: CCTGTGTGATCTCGAGGAGCAGACACCTGAAGAGCC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGAACACTGTTCTTTTaGTTCAGTCCCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGRTLFF*FSPSHS
Trigger: GCTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAAGAAGTCAGTCCACATaGCTTCAACCCGAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSRSQST*LQPESR
Trigger: GCGAGACTCGGGTTGAAGGCATGTGGACTGACTTCT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCAGCAGCTTCCTTATTTaGACAGGGTACTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRISSFLI*TGYCHF
Trigger: GAAATGGCAGTACCCTGTGCAAATAAGGAAGCTGCT...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCACTTTTTCCTTGCTTaGTCCTTGGTCAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIHFFLA*SLVSHR
Trigger: ACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTTCATCCAAAGCGAGTaGATATGGAAGCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGFIQSE*IWKPAC
Trigger: ACAGGCAGGCTTCCATATCCACTCGCTTTGGATGAA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGCAGGACCTCCAGTaGCCTCCTTACGTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIQQDLQ*PPYVFA
Trigger: AGCGAAGACGTAAGGAGGCCACTGGAGGTCCTGCTG...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGGTGGGTGCCAAGCATaGAGCAGAAATCTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSGGCQA*SRNLPT
Trigger: AGTGGGAAGATTTCTGCTCCATGCTTGGCACCCACC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATCCCCAGGCTGTTGTTaGATAGGCACAGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSSPGCC*IGTGVS
Trigger: TGACACACCTGTGCCTATCCAACAACAGCCTGGGGA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGACCTGTGGAAAGAGTaGCAAGAGCACGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEDLWKE*QEHVVM
Trigger: CATCACCACGTGCTCTTGTCACTCTTTCCACAGGTC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGCTCACGGTTGTTCATaGTCGCACGCAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQAHGCS*SHATLV
Trigger: CACAAGGGTTGCGTGCGATCATGAACAACCGTGAGC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGACTCCCCGAGTCCTTaGACCATGAGGTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSDSPSP*TMRSSP
Trigger: CGGTGACGACCTCATGGTTCAAGGACTCGGGGAGTC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGGTTACGGTTGGCCATaGCGATTCTCCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQGYGWP*RFSRGA
Trigger: AGCACCTCTGGAGAATCGTCATGGCCAACCGTAACC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGGCAACCCGTGGCTGTaGTGCCACAGTCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSGNPWL*CHSPPV
Trigger: TACTGGAGGACTGTGGCATCACAGCCACGGGTTGCC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATCCAGGGCATTGTCCGTaGGATCCAGGCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYPGHCP*DPGSSG
Trigger: ACCTGAAGAGCCTGGATCTCACGGACAATGCCCTGG...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTTACGACTCGGGGCTTaGGTAGCTGCACTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQLRLGA*VAALPP
Trigger: TGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGCTCATGCAAGAGGAGTaGCAGACATTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCELMQEE*QTFHVG
Trigger: GCCAACGTGGAATGTCTGGCACTCCTCTTGCATGAG...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAAGCCCAGGCCAGCGATaGTCCATAATACTCATGCAA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSSPGQR*SIILMQ
Trigger: TTGCATGAGTATTATGGAGCATCGCTGGCCTGGGCT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGCACCAGCCAACGTTTaGATTTCCGGCCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQAPANV*ISGQSA
Trigger: TGCTGACTGGCCGGAAATGCAAACGTTGGCTGGTGC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTACCACGTCCTGCAGCTaGAGGGCCACGCAGATGAGA +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSTTSCS*RATQMR
Trigger: TCTCATCTGCGTGGCCCTGCAGCTGCAGGACGTGGT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTCCAGTATCAGCTTCTaGAGGGCGCACTGGGAGACT +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQSSISF*RAHWET
Trigger: AGTCTCCCAGTGCGCCCTGCAGAAGCTGATACTGGA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTAGAACACTGTTCTTTTaGTTCAGTCCCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFRTLFF*FSPSHS
Trigger: GCTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTTTAGACTGGTCAGATaGCGGTTGCAGGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEFRLVR*RLQERA
Trigger: GGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAA...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAATTTGCACAGGGTACTaGCATTTCCACAGCCCAATT +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAICTGY*HFHSPI
Trigger: AATTGGGCTGTGGAAATGGCAGTACCCTGTGCAAAT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGCAGCTTCCTTATTTaGACAGGGTACTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSSFLI*TGYCHF
Trigger: GAAATGGCAGTACCCTGTGCAAATAAGGAAGCTGCT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATCGGGGCTTGAGTAGCTaGACTTCCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYRGLSS*TSSSSF
Trigger: GAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCG...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCCAGGTGCATAGCTTaGTCTGAGAAAACAGCGTTT +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFPRCIA*SEKTAF
Trigger: AAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTTCCTTGCTTGGTCCTTaGTCAGTCATCGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFSLLGP*SVIVAS
Trigger: TGAAGCAACGATGACTGACCAAGGACCAAGCAAGGA...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAACAGCACGATCCTTCTaGCTAGAGCCGATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSTARSF*LEPISQ
Trigger: TTGGGAAATCGGCTCTAGCCAGAAGGATCGTGCTGT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCAGAGGGCAGAGAGCTaGCTCGATTTCCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSQRAES*LDFQAL
Trigger: GAGGGCCTGGAAATCGAGCCAGCTCTCTGCCCTCTG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGCTGAGGCCAGACTCTaGCAACCCGTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSAEARL*QPVAVM
Trigger: CATCACAGCCACGGGTTGCCAGAGTCTGGCCTCAGC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGCTGAGGCCAGACTCTaGCAACCCGTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHAEARL*QPVAVM
Trigger: CATCACAGCCACGGGTTGCCAGAGTCTGGCCTCAGC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAAGTGGGGAAGCCTCATaGATCGACACAGTAGATTTA +
Preference number: 4 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGASGEAS*IDTVDL
Trigger: TAAATCTACTGTGTCGATCCATGAGGCTTCCCCACT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGCGTAGCTGGAAAAGGTaGGCGATTTGTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCERSWKR*AICLLP
Trigger: TGGAAGGAGACAAATCGCTCACCTTTTCCAGCTACG...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTTTGTTGCACAGCTTGTaGAATTCCTGGCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRLLHSL*NSWHFF
Trigger: GAAAAAGTGCCAGGAATTTCACAAGCTGTGCAACAA...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000390649.8
CDS-3UTR TCA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACAAACTCTTTGTCTTaGGTCTCGAAAAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGTNSLS*VSKRQW
Trigger: CCACTGTCTTTTCGAGACTCAAGACAAAGAGTTTGT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGTGTCCAGGTGGCACTaGTTCAGCATCAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSVSRWH*FSISLC
Trigger: GCAGAGGCTGATGCTGAATCAGTGCCACCTGGACAC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAAAGATGGTTCTCTCATaGCCTCGCACAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSKMVLS*PRTEAS
Trigger: TGAAGCTTCTGTGCGAGGTCATGAGAGAACCATCTT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTCCAGGTCCTGGAGATaGCAAGATGGTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCESRSWR*QDGSLM
Trigger: CATGAGAGAACCATCTTGTCATCTCCAGGACCTGGA...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCCAGGGCATTGTCCGTaGGATCCAGGCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSPGHCP*DPGSSG
Trigger: ACCTGAAGAGCCTGGATCTCACGGACAATGCCCTGG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCTGAGTCCTATGACTTaGAGGTCTCTAGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFLSPMT*RSLAFK
Trigger: TTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGCTCATGCAAGAGGAGTaGCAGACATTCCACGTTGGC +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQLMQEE*QTFHVG
Trigger: GCCAACGTGGAATGTCTGGCACTCCTCTTGCATGAG...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATATTCCTGACTTTCCGTaGAGAACCACCGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYIPDFP*RTTVRG
Trigger: GCCTCGCACGGTGGTTCTGCACGGAAAGTCAGGAAT...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGTGGATATGGAAGCCTaGCTGTTTAAGCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSVDMEA*LFKLHG
Trigger: TCCATGGAGCTTAAACAGGCAGGCTTCCATATCCAC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCAGAAATCTTCCCACTaGTCCTCAATGAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFQKSSH*SSMRVL
Trigger: TAAGACCCTCATTGAGGAGCAGTGGGAAGATTTCTG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTACCAGGGGTAATCTGTaGATTTCTAAACATCAGGGT +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRTRGNL*ISKHQG
Trigger: ACCCTGATGTTTAGAAATGCACAGATTACCCCTGGT...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTTTAGACTGGTCAGATaGCGGTTGCAGGAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQFRLVR*RLQERA
Trigger: GGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCTCGATTTCAAACTGTaGAATAGAGCATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRLDFKL*NRACGR
Trigger: TCGACCACATGCTCTATTCCACAGTTTGAAATCGAG...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATCCTTGCTTGGTCCTTaGTCAGTCATCGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSSLLGP*SVIVAS
Trigger: TGAAGCAACGATGACTGACCAAGGACCAAGCAAGGA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATTCATCCAAAGCGAGTaGATATGGAAGCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSFIQSE*IWKPAC
Trigger: ACAGGCAGGCTTCCATATCCACTCGCTTTGGATGAA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCAGCAGGACCTCCAGTaGCCTCCTTACGTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSQQDLQ*PPYVFA
Trigger: AGCGAAGACGTAAGGAGGCCACTGGAGGTCCTGCTG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCTCTGCAGACTACAGTaGGGAAGCCTCATGGATCGA +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQILCRLQ*GSLMDR
Trigger: TCGATCCATGAGGCTTCCCCACTGTAGTCTGCAGAG...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGATCTTGATACAAGGCTaGGAGCTCAGGTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQILIQG*ELRFWG
Trigger: CCCCCAAAACCTGAGCTCTCAGCCTTGTATCAAGAT...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGAAGCCCCACCGGTCTaGATCAAAAGCACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHEAPPV*IKSTSQ
Trigger: TTGGCTGGTGCTTTTGATTCAGACCGGTGGGGCTTC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATACACGACCTCTGACTTaGGCTTCTCTGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHTRPLT*ASLCPR
Trigger: ACGTGGGCACAGAGAAGCTCAAGTCAGAGGTCGTGT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATAACCCTTGTGTCTTCTaGTGCTCACCAATCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHNPCVF*CSPIPR
Trigger: GCGCGGGATTGGTGAGCATCAGAAGACACAAGGGTT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTAACCCTTGTGTCTTCTaGTGCTCACCAATCCCGCGC +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSNPCVF*CSPIPR
Trigger: GCGCGGGATTGGTGAGCATCAGAAGACACAAGGGTT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGGGTGCCTCCCAAGTTaGGGGATCTTAGGTTACGGT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSGCLPS*GILGYG
Trigger: ACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCAGGTGCGTCAGCCATaGGTTACCCATAAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHQVRQP*VTHKRK
Trigger: CTTGCGCTTATGGGTAACTCATGGCTGACGCACCTG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTCCAGGTCCTGGAGATaGCAAGATGGTTCTCTCATG +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQSRSWR*QDGSLM
Trigger: CATGAGAGAACCATCTTGTCATCTCCAGGACCTGGA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGCAGGTGTGGGTGGGTaGCAAGCATGGAGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSAGVGG*QAWSRN
Trigger: ATTTCTGCTCCATGCTTGGCACCCACCCACACCTGC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCACCCATAAGCGCAAGTaGAAGAAAACCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQITHKRK*KKTTAS
Trigger: GCTGGCTGTGGTTTTCTTGCACTTGCGCTTATGGGT...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCTCTTCATCAAAAGAATaGCAACTACCGTCAATTACG +
Preference number: 4 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRISSSKE*QLPSIT
Trigger: CGTAATTGACGGTAGTTGGCATTCTTTTGATGAAGA...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGAAGGAACTCCCAGGTaGATAGCTTGCTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEEGTPR*IACSEK
Trigger: TTTCTCAGAGCAAGCTATGCACCTGGGAGTTCCTTC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCACAGCACGATCCTTCTaGCTAGAGCCGATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQITARSF*LEPISQ
Trigger: TTGGGAAATCGGCTCTAGCCAGAAGGATCGTGCTGT...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGCGGCACAGAAGTCCTaGAGACTGAGGTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHAAQKS*RLRWKK
Trigger: CTTCTTCCACCTCAGTCTCCAGGACTTCTGTGCCGC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAATCAAGTCCAGGTTCTaGTTAATCGGAAGCCACACT +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSIKSRF*LIGSHT
Trigger: AGTGTGGCTTCCGATTAACCAGAACCTGGACTTGAT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTTGGGATGCCTCAGCTTaGCACACAGGGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSWDASA*HTGSSW
Trigger: CCATGAAGACCCTGTGTGCCAAGCTGAGGCATCCCA...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATTCTGTATCTTGCAGGTaGGATGCCTCAGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYSVSCR*DASAWH
Trigger: GTGCCAAGCTGAGGCATCCCACCTGCAAGATACAGA...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGCACCAGGTTTAGACTaGTCAGATGCCGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHAPGLD*SDAGCR
Trigger: CCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCTCAGATGGGTGTGAGTaGGGCAGGTTTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQISDGCE*GRFPYL
Trigger: AAGATACGGAAACCTGCCCCACTCACACCCATCTGA...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGACCTGTGGAAAGAGTaGCAAGAGCACGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHDLWKE*QEHVVM
Trigger: CATCACCACGTGCTCTTGTCACTCTTTCCACAGGTC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTGTCTCCTTCCATCTTaGTACAAGGCTGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQCLLPS*YKAESS
Trigger: TGAGCTCTCAGCCTTGTATCAAGATGGAAGGAGACA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATCGATTTCCCAATTCCTaGCTTTCCGTGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYRFPNS*LSVQNH
Trigger: GTGGTTCTGCACGGAAAGTCAGGAATTGGGAAATCG...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCTTGGGAAGATCCCTTTaGCATCCACCCGAATTTTCC +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQILGRSL*HPPEFS
Trigger: GGAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAA...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCTCTCAAGGCATCACTaGGAGGCATTACTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSLSRHH*EALLPG
Trigger: ACCAGGGAGTAATGCCTCTCAGTGATGCCTTGAGAG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATAACAGAGAGACCCAGTaGAGAAGCTTCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYNRETQ*RSFCFT
Trigger: GGTGAAGCAGAAGCTTCTGCACTGGGTCTCTCTGTT...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCGAGGCAGAAGGAAGATaGTATCAAGTCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIEAEGR*YQVQVL
Trigger: CAGAACCTGGACTTGATAGCATCTTCCTTCTGCCTC...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTATGCTAAGGCTCAGGTaGGTCAGCCATGAGTTACCC +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSMLRLR*VSHELP
Trigger: GGGTAACTCATGGCTGACGCACCTGAGCCTTAGCAT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGGACTGAAGTTATTCTaGACCAGGTTTAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEGLKLF*TRFRLV
Trigger: GACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGCCTCCTCAGCGAATTTaGTCATCACGTGACTCTTGT +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQPPQRI*SSRDSC
Trigger: ACAAGAGTCACGTGATGACCAAATTCGCTGAGGAGG...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGTCTCGAAAAGACAGTaGAAGGCGTCCAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSVSKRQ*KASRVS
Trigger: AGACACCCTGGACGCCTTCCACTGTCTTTTCGAGAC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCTCTGCAGACTACAGTaGGGAAGCCTCATGGATCGA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHLCRLQ*GSLMDR
Trigger: TCGATCCATGAGGCTTCCCCACTGTAGTCTGCAGAG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATTCAGATGGGTGTGAGTaGGGCAGGTTTCCGTATCTT +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYSDGCE*GRFPYL
Trigger: AAGATACGGAAACCTGCCCCACTCACACCCATCTGA...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCGTAGCTGGAAAAGGTaGGCGATTTGTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHRSWKR*AICLLP
Trigger: TGGAAGGAGACAAATCGCTCACCTTTTCCAGCTACG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGCTTTGTGTCATTGTTaGGGACAGAGCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHALCHC*GQSPGH
Trigger: ATGACCTGGGCTCTGTCCTCAACAATGACACAAAGC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATTTGGGAAGATCCCTTTaGCATCCACCCGAATTTTCC +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYLGRSL*HPPEFS
Trigger: GGAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAA...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAATATGCTCTGAGATATaGCGGACATTTCACAGATAC +
Preference number: 4 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSICSEI*RTFHRY
Trigger: GTATCTGTGAAATGTCCGTCATATCTCAGAGCATAT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTCCCTCTATATGCTCTaGGATATGACGGACATTTCA +
Preference number: 4 (lower is better)
Translates to: IACSEKTAFKVPPSDGCESLYML*DMTDIS
Trigger: TGAAATGTCCGTCATATCTCAGAGCATATAGAGGGA...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCGCAAATACGGACAGTaGTGGAGGCAGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSRKYGQ*WRQKED
Trigger: ATCTTCCTTCTGCCTCCAGCACTGTCCGTATTTGCG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATATTCTCCAGAGGTGCTaGACACCAGGGGTAATCTGT +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHILQRC*TPGVIC
Trigger: ACAGATTACCCCTGGTGTGCAGCACCTCTGGAGAAT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATGAAGGAACTCCCAGGTaGATAGCTTGCTCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYEGTPR*IACSEK
Trigger: TTTCTCAGAGCAAGCTATGCACCTGGGAGTTCCTTC...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGGAAGCCACACTTCTTaGAAGCTGTTTAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQGSHTS*KLFNAK
Trigger: CTTGGCATTAAACAGCTTCCAAGAAGTGTGGCTTCC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCATCAAGTCCAGGTTCTaGTTAATCGGAAGCCACACT +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIIKSRF*LIGSHT
Trigger: AGTGTGGCTTCCGATTAACCAGAACCTGGACTTGAT...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATAGAAGGATGTTCATGTaGAACAGAGCACGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHRRMFM*NRARSS
Trigger: TGAGCTCCGTGCTCTGTTTCACATGAACATCCTTCT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGACAAACTCTTTGTCTTaGGTCTCGAAAAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQTNSLS*VSKRQW
Trigger: CCACTGTCTTTTCGAGACTCAAGACAAAGAGTTTGT...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATTCATTCCTTTGGGACTaGAGTTATTCTGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYSFLWD*SYSAPG
Trigger: ACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGA...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTATCATTCTCCATCTTTaGGAAGGAACTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSIILHL*EGTPRC
Trigger: GCACCTGGGAGTTCCTTCTCAAAGATGGAGAATGAT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCCATTGAGGGCTTTGTaGGAATCAGAAATCATTCTC +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIPLRAL*ESEIIL
Trigger: GAGAATGATTTCTGATTCTCACAAAGCCCTCAATGG...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCTGGCACTTTTTCCTTaGTTGGTCCTTGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHLALFP*LVLGQS
Trigger: TGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGTTGTTCTTTTGTCTCTaGAGCTGTGGCACTATCTTG +
Preference number: 4 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQLFFCL*SCGTIL
Trigger: CAAGATAGTGCCACAGCTGCAGAGACAAAAGAACAA...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390649.8
CDS-3UTR CCA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCCAGACATTCCACGTTaGCATTCTCGATTTCAAACT +
Preference number: 4 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIPDIPR*HSRFQT
Trigger: AGTTTGAAATCGAGAATGCCAACGTGGAATGTCTGG...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCCTCCTCAGCGAATTTaGTCATCACGTGACTCTTGT +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHPPQRI*SSRDSC
Trigger: ACAAGAGTCACGTGATGACCAAATTCGCTGAGGAGG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCTGGAGATGACAAGATaGTTCTCTCATGACCTCGCA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHLEMTR*FSHDLA
Trigger: TGCGAGGTCATGAGAGAACCATCTTGTCATCTCCAG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATATTTGCACAGGGTACTaGCATTTCCACAGCCCAATT +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHICTGY*HFHSPI
Trigger: AATTGGGCTGTGGAAATGGCAGTACCCTGTGCAAAT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCACTTTTTCCTTGCTTaGTCCTTGGTCAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHHFFLA*SLVSHR
Trigger: ACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGGAAGCCACACTTCTTaGAAGCTGTTTAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSGSHTS*KLFNAK
Trigger: CTTGGCATTAAACAGCTTCCAAGAAGTGTGGCTTCC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATAGTGGGGAAGCCTCATaGATCGACACAGTAGATTTA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHSGEAS*IDTVDL
Trigger: TAAATCTACTGTGTCGATCCATGAGGCTTCCCCACT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCCATTGAGGGCTTTGTaGGAATCAGAAATCATTCTC +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHPLRAL*ESEIIL
Trigger: GAGAATGATTTCTGATTCTCACAAAGCCCTCAATGG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTTCCCTCTATATGCTCTaGGATATGACGGACATTTCA +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSSLYML*DMTDIS
Trigger: TGAAATGTCCGTCATATCTCAGAGCATATAGAGGGA...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTACCAGGGGTAATCTGTaGATTTCTAAACATCAGGGT +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSTRGNL*ISKHQG
Trigger: ACCCTGATGTTTAGAAATGCACAGATTACCCCTGGT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CCA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCTCGATTTCAAACTGTaGAATAGAGCATGTGGTCGA +
Preference number: 4 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHLDFKL*NRACGR
Trigger: TCGACCACATGCTCTATTCCACAGTTTGAAATCGAG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR TCA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTATATGCTCTGAGATATaGCGGACATTTCACAGATAC +
Preference number: 4 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSICSEI*RTFHRY
Trigger: GTATCTGTGAAATGTCCGTCATATCTCAGAGCATAT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR GCA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATTCTTCATCAAAAGAATaGCAACTACCGTCAATTACG +
Preference number: 4 (lower is better)
Translates to: FPLYALRYDGHFTDTESYSSSKE*QLPSIT
Trigger: CGTAATTGACGGTAGTTGGCATTCTTTTGATGAAGA...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp TGCAGCTGCAGGGCCACGCAGATGAGAGAGCCCACGGCGGGCACCTaGCACTGGTCGAGCAGCTCACGGTTGTTCATGATCGCACGCAAC +
Preference number: 5 (lower is better)
Translates to: CSCRATQMREPTAGT*HWSSSSRLFMIARN
Trigger: GTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGGGCTCTCTCATCTGCGTGGCCCTGCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp TGCAGGGCCACGCAGATGAGAGAGCCCACGGCGGGCACCTGGCACTaGTCGAGCAGCTCACGGTTGTTCATGATCGCACGCAACCCTTGT +
Preference number: 5 (lower is better)
Translates to: CRATQMREPTAGTWH*SSSSRLFMIARNPC
Trigger: ACAAGGGTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGGGCTCTCTCATCTGCGTGGCCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp CCGCTCTGTCAGGATGCTGCTGCCCAGGTCCAGCTGCCGCAGGTGTaGGTGGGTGCCAAGCATGGAGCAGAAATCTTCCCACTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PLCQDAAAQVQLPQV*VGAKHGAEIFPLLL
Trigger: GAGGAGCAGTGGGAAGATTTCTGCTCCATGCTTGGCACCCACCCACACCTGCGGCAGCTGGACCTGGGCAGCAGCATCCTGACAGAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp CCTCGCACAGCGCAGCAACCCCACCGTCACCCAGGGCATTGTCCGTaGGATCCAGGCTCTTCAGGTGTCTGCTCCTCGAGATCACACAGG +
Preference number: 5 (lower is better)
Translates to: PRTAQQPHRHPGHCP*DPGSSGVCSSRSHR
Trigger: CCTGTGTGATCTCGAGGAGCAGACACCTGAAGAGCCTGGATCTCACGGACAATGCCCTGGGTGACGGTGGGGTTGCTGCGCTGTGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp CCACGGCGGGCACCTGGCACTGGTCGAGCAGCTCACGGTTGTTCATaGTCGCACGCAACCCTTGTGTCTTCTGATGCTCACCAATCCCGC +
Preference number: 5 (lower is better)
Translates to: PRRAPGTGRAAHGCS*SHATLVSSDAHQSR
Trigger: GCGGGATTGGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp TGGAAGGCGTCCAGGGTGTCTCCTGGGGTGGTGGCATTAGGCTGCTaGCCCAACAGAGAGACCCAGTGCAGAAGCTTCTGCTTCACCCCC +
Preference number: 5 (lower is better)
Translates to: WKASRVSPGVVALGC*PNRETQCRSFCFTP
Trigger: GGGGGTGAAGCAGAAGCTTCTGCACTGGGTCTCTCTGTTGGGTCAGCAGCCTAATGCCACCACCCCAGGAGACACCCTGGACGCCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp CTTTCCGTGCAGAACCACCGTGCGAGGCCGGAAGCCCCACCGGTCTaGATCAAAAGCACCAGCCAACGTTTGCATTTCCGGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LSVQNHRARPEAPPV*IKSTSQRLHFRPVS
Trigger: GCTGACTGGCCGGAAATGCAAACGTTGGCTGGTGCTTTTGATTCAGACCGGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp AGGTGTGTCAAGCTCCGGTTGCTGACGAGGGCTGAGGCCAGACTCTaGCAACCCGTGGCTGTGATGCCACAGTCCTCCAGTATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RCVKLRLLTRAEARL*QPVAVMPQSSSISF
Trigger: GAAGCTGATACTGGAGGACTGTGGCATCACAGCCACGGGTTGCCAGAGTCTGGCCTCAGCCCTCGTCAGCAACCGGAGCTTGACACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp AGTCCACATGCCTTCAACCCGAGTCTCGCCAGAACACTGTTCTTTTaGTTCAGTCCCTCGCACAGCGCAGCAACCCCACCGTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: SPHAFNPSLARTLFF*FSPSHSAATPPSPR
Trigger: CCTGGGTGACGGTGGGGTTGCTGCGCTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCTGGCGAGACTCGGGTTGAAGGCATGTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp CTAGAGCCGATTTCCCAATTCCTGACTTTCCGTGCAGAACCACCGTaGGAGGCCGGAAGCCCCACCGGTCTGAATCAAAAGCACCAGCCA +
Preference number: 5 (lower is better)
Translates to: LEPISQFLTFRAEPP*EAGSPTGLNQKHQP
Trigger: TGGCTGGTGCTTTTGATTCAGACCGGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACGGAAAGTCAGGAATTGGGAAATCGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp ACGATCCTTCTGGCTAGAGCCGATTTCCCAATTCCTGACTTTCCGTaGAGAACCACCGTGCGAGGCCGGAAGCCCCACCGGTCTGAATCA +
Preference number: 5 (lower is better)
Translates to: TILLARADFPIPDFP*RTTVRGRKPHRSES
Trigger: TGATTCAGACCGGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACGGAAAGTCAGGAATTGGGAAATCGGCTCTAGCCAGAAGGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp CCTTTCTGGTCGGGACATGATCTCCGTCACCGGAGCCTGGGAGTCTaGCCACTCCCTGGAGATGAACTCTGTGACACTGCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PFWSGHDLRHRSLGV*PLPGDELCDTALLL
Trigger: AAGAAGGAGAGCAGTGTCACAGAGTTCATCTCCAGGGAGTGGCCAGACTCCCAGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp AACAACAGCCTTTCTGGTCGGGACATGATCTCCGTCACCGGAGCCTaGGAGTCTGGCCACTCCCTGGAGATGAACTCTGTGACACTGCTC +
Preference number: 5 (lower is better)
Translates to: NNSLSGRDMISVTGA*ESGHSLEMNSVTLL
Trigger: GAGCAGTGTCACAGAGTTCATCTCCAGGGAGTGGCCAGACTCCCAGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAAGGCTGTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp GTCTTGAGTCTCGAAAAGACAGTGGAAGGCGTCCAGGGTGTCTCCTaGGGTGGTGGCATTAGGCTGCTGACCCAACAGAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: VLSLEKTVEGVQGVS*GGGIRLLTQQRDPV
Trigger: CACTGGGTCTCTCTGTTGGGTCAGCAGCCTAATGCCACCACCCCAGGAGACACCCTGGACGCCTTCCACTGTCTTTTCGAGACTCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp GTATCAGCTTCTGCAGGGCGCACTGGGAGACTCTCAAGGCATCACTaGGAGGCATTACTCCCTGGTCTGTCACCTTGTTTCCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: VSASAGRTGRLSRHH*EALLPGLSPCFLPG
Trigger: GCCTGGCAGGAAACAAGGTGACAGACCAGGGAGTAATGCCTCTCAGTGATGCCTTGAGAGTCTCCCAGTGCGCCCTGCAGAAGCTGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp CGCAGGTGTGGGTGGGTGCCAAGCATGGAGCAGAAATCTTCCCACTaGTCCTCAATGAGGGTCTTATCCCGCATCCATAGAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: RRCGWVPSMEQKSSH*SSMRVLSRIHRGTT
Trigger: TGTGGTCCCTCTATGGATGCGGGATAAGACCCTCATTGAGGAGCAGTGGGAAGATTTCTGCTCCATGCTTGGCACCCACCCACACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp AGAGCCCAGGTCATCGAAACCGTCAATGATGAACAACAGCCTTTCTaGTCGGGACATGATCTCCGTCACCGGAGCCTGGGAGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: RAQVIETVNDEQQPF*SGHDLRHRSLGVWP
Trigger: TGGCCAGACTCCCAGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAAGGCTGTTGTTCATCATTGACGGTTTCGATGACCTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp GCTGTGATGCCACAGTCCTCCAGTATCAGCTTCTGCAGGGCGCACTaGGAGACTCTCAAGGCATCACTGAGAGGCATTACTCCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: AVMPQSSSISFCRAH*ETLKASLRGITPWS
Trigger: AGACCAGGGAGTAATGCCTCTCAGTGATGCCTTGAGAGTCTCCCAGTGCGCCCTGCAGAAGCTGATACTGGAGGACTGTGGCATCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCTGTGTCAAGCTCCGGTaGCTGACGAGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRICVKLR*LTRAEA
Trigger: GGCCTCAGCCCTCGTCAGCAACCGGAGCTTGACACA...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCCGTCACCCAGGGCATaGTCCGTGAGATCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIPSPRA*SVRSRL
Trigger: GAGCCTGGATCTCACGGACAATGCCCTGGGTGACGG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp AGACTCCCCGAGTCCTTGAACCATGAGGTCGTCACCGTCAAACACTaGCTTCCTATTCCACACTCCCTCCACAGCCATACGGCAGAAGCG +
Preference number: 5 (lower is better)
Translates to: RLPESLNHEVVTVKH*LPIPHSLHSHTAEA
Trigger: CGCTTCTGCCGTATGGCTGTGGAGGGAGTGTGGAATAGGAAGTCAGTGTTTGACGGTGACGACCTCATGGTTCAAGGACTCGGGGAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp TTCCCTGGTAGAGTCCACCTTGCGCCCAGCACAGCACGATCCTTCTaGCTAGAGCCGATTTCCCAATTCCTGACTTTCCGTGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: FPGRVHLAPSTARSF*LEPISQFLTFRAEP
Trigger: TGGTTCTGCACGGAAAGTCAGGAATTGGGAAATCGGCTCTAGCCAGAAGGATCGTGCTGTGCTGGGCGCAAGGTGGACTCTACCAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp GCGCACTGGGAGACTCTCAAGGCATCACTGAGAGGCATTACTCCCTaGTCTGTCACCTTGTTTCCTGCCAGGCTCAGAGATTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AHWETLKASLRGITP*SVTLFPARLRDFRL
Trigger: CAGCCTGAAATCTCTGAGCCTGGCAGGAAACAAGGTGACAGACCAGGGAGTAATGCCTCTCAGTGATGCCTTGAGAGTCTCCCAGTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACCTGTGAGCGTTTGGTaGAAGGGGGCGACGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAPVSVW*KGATLS
Trigger: GGAGAGCGTCGCCCCCTTCAACCAAACGCTCACAGG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCAGGCCTGTGAGCGTTaGGTTGAAGGGGGCGACGCT +
Preference number: 5 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGQACER*VEGGDA
Trigger: AGCGTCGCCCCCTTCAACCAAACGCTCACAGGCCTG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp CCACAGGACATGCCTCAGCGGACTCATCTCTTGGGAAGATCCCTTTaGCATCCACCCGAATTTTCCGCAAATACGGACAGTGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PQDMPQRTHLLGRSL*HPPEFSANTDSAGG
Trigger: GCCTCCAGCACTGTCCGTATTTGCGGAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAAGAGATGAGTCCGCTGAGGCATGTCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp AGCAGGACCTTCCTCAGCAGACTGCGTATGAGGGTGAACGGAGGCTaGTTCTCAGCCCAGTCTTTGCAGAGCTTTGTGTCATTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SRTFLSRLRMRVNGG*FSAQSLQSFVSLLR
Trigger: CCTCAACAATGACACAAAGCTCTGCAAAGACTGGGCTGAGAAGCAGCCTCCGTTCACCCTCATACGCAGTCTGCTGAGGAAGGTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACTGGTAGAGTCCACCTaGCGCCCAGCACAGCACGAT +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGALVEST*RPAQHD
Trigger: ATCGTGCTGTGCTGGGCGCAAGGTGGACTCTACCAG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTCACCCAGGGCATaGTCCGTGAGATCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFPSPRA*SVRSRL
Trigger: GAGCCTGGATCTCACGGACAATGCCCTGGGTGACGG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp TGTGAAACAGAGCACGGAGCTCAGACTCCCCGAGTCCTTGAACCATaGGGTCGTCACCGTCAAACACTGACTTCCTATTCCACACTCCCT +
Preference number: 5 (lower is better)
Translates to: CETEHGAQTPRVLEP*GRHRQTLTSYSTLP
Trigger: AGGGAGTGTGGAATAGGAAGTCAGTGTTTGACGGTGACGACCTCATGGTTCAAGGACTCGGGGAGTCTGAGCTCCGTGCTCTGTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGCACCAGCCAACGTTaGCATTTCCGGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSTSQR*HFRPVS
Trigger: GCTGACTGGCCGGAAATGCAAACGTTGGCTGGTGCT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTAGACTCCCCGAGTCCTaGAACCATGAGGTCGTCACC +
Preference number: 5 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRRLPES*NHEVVT
Trigger: GGTGACGACCTCATGGTTCAAGGACTCGGGGAGTCT...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCTTCCCCAGGCTGTTGTaGGATAGGCACAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIFPRLL*DRHRCV
Trigger: GACACACCTGTGCCTATCCAACAACAGCCTGGGGAA...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCTGGTCAGATGCCGGTaGCAGGAAAGGGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFLVRCR*QERAKE
Trigger: CTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCAG...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp AGCAGCTCACGGTTGTTCATGATCGCACGCAACCCTTGTGTCTTCTaGTGCTCACCAATCCCGCGCTCAAGGAGCAAGTGGATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SSSRLFMIARNPCVF*CSPIPRSRSKWILC
Trigger: ACAAAGAATCCACTTGCTCCTTGAGCGCGGGATTGGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATCATGAACAACCGTGAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp ATTGTCTTCCACAGGGTTCATGCTAAGGCTCAGGTGCGTCAGCCATaGGTTACCCATAAGCGCAAGTGCAAGAAAACCACAGCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: IVFHRVHAKAQVRQP*VTHKRKCKKTTASR
Trigger: ACGGCTGGCTGTGGTTTTCTTGCACTTGCGCTTATGGGTAACTCATGGCTGACGCACCTGAGCCTTAGCATGAACCCTGTGGAAGACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp CCTTTGGGACTGAAGTTATTCTGCACCAGGTTTAGACTGGTCAGATaGCGGTTGCAGGAAAGGGCCAAGGAGAGTGCCTCACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: PLGLKLFCTRFRLVR*RLQERAKESASQQS
Trigger: TGATTGCTGTGAGGCACTCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGATCGCACGCAACCCTaGTGTCTTCTGATGCTCACC +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGADRTQP*CLLMLT
Trigger: GGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCATCGAGCAGCTCACGGTaGTTCATGATCGCACGCAAC +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGASSSSR*FMIARN
Trigger: GTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGA...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGCAGGCCTGTGAGCGTTaGGTTGAAGGGGGCGACGCT +
Preference number: 5 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEQACER*VEGGDA
Trigger: AGCGTCGCCCCCTTCAACCAAACGCTCACAGGCCTG...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTTGGGTGCCTCCCAAGTaGAGGGATCTTAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRWVPPK*RDLRLR
Trigger: CCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCA...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCTCGTTCCCCAGGCTGTaGTTGGATAGGCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGSFPRL*LDRHRC
Trigger: ACACCTGTGCCTATCCAACAACAGCCTGGGGAACGA...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCATTACGACTCGGGGCTaGAGTAGCTGCACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGITTRG*SSCTSS
Trigger: GGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAAT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp TGGGACAGGCAAAGGCCGAACACAGCTTCATCATTCCTTTGGGACTaGAGTTATTCTGCACCAGGTTTAGACTGGTCAGATGCCGGTTGC +
Preference number: 5 (lower is better)
Translates to: WDRQRPNTASSFLWD*SYSAPGLDWSDAGC
Trigger: GCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCTGTGTTCGGCCTTTGCCTGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp AGCTTCACGCCATTGTCTTCCACAGGGTTCATGCTAAGGCTCAGGTaGGTCAGCCATGAGTTACCCATAAGCGCAAGTGCAAGAAAACCA +
Preference number: 5 (lower is better)
Translates to: SFTPLSSTGFMLRLR*VSHELPISASARKP
Trigger: TGGTTTTCTTGCACTTGCGCTTATGGGTAACTCATGGCTGACGCACCTGAGCCTTAGCATGAACCCTGTGGAAGACAATGGCGTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp AAGGCCGAACACAGCTTCATCATTCCTTTGGGACTGAAGTTATTCTaGACCAGGTTTAGACTGGTCAGATGCCGGTTGCAGGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: KAEHSFIIPLGLKLF*TRFRLVRCRLQERA
Trigger: GGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCTGTGTTCGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp TGTTTTAAGGCTTCACACGCCATCCTTACATCCTCTTCCTTCAGGTaGGTGCCTCCCAAGTTGAGGGATCTTAGGTTACGGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: CFKASHAILTSSSFR*VPPKLRDLRLRLAM
Trigger: CATGGCCAACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCACCTGAAGGAAGAGGATGTAAGGATGGCGTGTGAAGCCTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp ACTGATTCAGCATCAGCCTCTGCAGACTACAGTGGGGAAGCCTCATaGATCGACACAGTAGATTTACACCTTCGTTCCCCAGGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: TDSASASADYSGEAS*IDTVDLHLRSPGCC
Trigger: ACAACAGCCTGGGGAACGAAGGTGTAAATCTACTGTGTCGATCCATGAGGCTTCCCCACTGTAGTCTGCAGAGGCTGATGCTGAATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGCCTGTGAGCGTTTGGTaGAAGGGGGCGACGCTCTCC +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQPVSVW*KGATLS
Trigger: GGAGAGCGTCGCCCCCTTCAACCAAACGCTCACAGG...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAACTCTTTCCTCCAGATaGAGACAGCGCCGGACCACG +
Preference number: 5 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSTLSSR*RQRRTT
Trigger: CGTGGTCCGGCGCTGTCTCAATCTGGAGGAAAGAGT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTTCGTTCCCCAGGCTGTaGTTGGATAGGCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFSFPRL*LDRHRC
Trigger: ACACCTGTGCCTATCCAACAACAGCCTGGGGAACGA...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp CGTAGCCCAGGCCAGCGATGCTCCATAATACTCATGCAAGAGGAGTaGCAGACATTCCACGTTGGCATTCTCGATTTCAAACTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: RSPGQRCSIILMQEE*QTFHVGILDFKLWN
Trigger: ATTCCACAGTTTGAAATCGAGAATGCCAACGTGGAATGTCTGGCACTCCTCTTGCATGAGTATTATGGAGCATCGCTGGCCTGGGCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390649.8
ENST00000597673.1
ENST00000621651.4
CDS GCA 90 bp AGGGATCTTAGGTTACGGTTGGCCATGACGATTCTCCAGAGGTGCTaGACACCAGGGGTAATCTGTGCATTTCTAAACATCAGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: RDLRLRLAMTILQRC*TPGVICAFLNIRVC
Trigger: ACAGACCCTGATGTTTAGAAATGCACAGATTACCCCTGGTGTGCAGCACCTCTGGAGAATCGTCATGGCCAACCGTAACCTAAGATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp TTGAGGGATCTTAGGTTACGGTTGGCCATGACGATTCTCCAGAGGTaGTGCACACCAGGGGTAATCTGTGCATTTCTAAACATCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LRDLRLRLAMTILQR*CTPGVICAFLNIRV
Trigger: GACCCTGATGTTTAGAAATGCACAGATTACCCCTGGTGTGCAGCACCTCTGGAGAATCGTCATGGCCAACCGTAACCTAAGATCCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp AAAGAATGCCAACTACCGTCAATTACGACTCGGGGCTTGAGTAGCTaGACTTCCTCCAGCAGCTTCCTTATTTGCACAGGGTACTGCCAT +
Preference number: 5 (lower is better)
Translates to: KECQLPSITTRGLSS*TSSSSFLICTGYCH
Trigger: ATGGCAGTACCCTGTGCAAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAATTGACGGTAGTTGGCATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp TCTTCGCTCACGAGGCCAAACAAGAAACGCTTCATCCAAAGCGAGTaGATATGGAAGCCTGCCTGTTTAAGCTCCATGGACCTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SSLTRPNKKRFIQSE*IWKPACLSSMDLFV
Trigger: GACAAAGAGGTCCATGGAGCTTAAACAGGCAGGCTTCCATATCCACTCGCTTTGGATGAAGCGTTTCTTGTTTGGCCTCGTGAGCGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCACTCATAGAGACACCATaGCAGCCCGTAGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGALIETP*QPVAGK
Trigger: TTTTCCAGCTACGGGCTGCAATGGTGTCTCTATGAG...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGCACTTTTTCCTTGCTaGGTCCTTGGTCAGTCATCG +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAALFPC*VLGQSS
Trigger: CGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAAGCTTTGTGTCATTGTaGAGGACAGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGASFVSL*RTEPRS
Trigger: TGACCTGGGCTCTGTCCTCAACAATGACACAAAGCT...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGACACGACCTCTGACTaGAGCTTCTCTGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEDTTSD*SFSVPT
Trigger: CGTGGGCACAGAGAAGCTCAAGTCAGAGGTCGTGTC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGCTCCATGGACCTCTTaGTCTTCTCAACGTACAGAG +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAAPWTS*SSQRTE
Trigger: CTCTGTACGTTGAGAAGACAAAGAGGTCCATGGAGC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCTTGGGAAGATCCCTTaGACATCCACCCGAATTTTC +
Preference number: 5 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRILGKIP*TSTRIF
Trigger: GAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAAG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCATTCCCCAGGCTGTTGTaGGATAGGCACAGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSFPRLL*DRHRCV
Trigger: GACACACCTGTGCCTATCCAACAACAGCCTGGGGAA...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTATCCAGCAGCTTCCTTATTaGCACAGGGTACTGCCATTT +
Preference number: 5 (lower is better)
Translates to: QRLKFLHQMGVSGAGFRIQQLPY*HRVLPF
Trigger: AAATGGCAGTACCCTGTGCAAATAAGGAAGCTGCTG...GATACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp ACTTCTTGGAAGCTGTTTAATGCCAAGCGAACAAACTCTTTGTCTTaGGTCTCGAAAAGACAGTGGAAGGCGTCCAGGGTGTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TSWKLFNAKRTNSLS*VSKRQWKASRVSPG
Trigger: CCCAGGAGACACCCTGGACGCCTTCCACTGTCTTTTCGAGACTCAAGACAAAGAGTTTGTTCGCTTGGCATTAAACAGCTTCCAAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp CTTCATCAAAAGAATGCCAACTACCGTCAATTACGACTCGGGGCTTaGGTAGCTGCACTTCCTCCAGCAGCTTCCTTATTTGCACAGGGT +
Preference number: 5 (lower is better)
Translates to: LHQKNANYRQLRLGA*VAALPPAASLFAQG
Trigger: ACCCTGTGCAAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAATTGACGGTAGTTGGCATTCTTTTGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp CCGAATTTTCCGCAAATACGGACAGTGCTGGAGGCAGAAGGAAGATaGTATCAAGTCCAGGTTCTGGTTAATCGGAAGCCACACTTCTTG +
Preference number: 5 (lower is better)
Translates to: PNFPQIRTVLEAEGR*YQVQVLVNRKPHFL
Trigger: CAAGAAGTGTGGCTTCCGATTAACCAGAACCTGGACTTGATAGCATCTTCCTTCTGCCTCCAGCACTGTCCGTATTTGCGGAAAATTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp ACTCGGGGCTTGAGTAGCTGCACTTCCTCCAGCAGCTTCCTTATTTaGACAGGGTACTGCCATTTCCACAGCCCAATTATCTGTAAGTTA +
Preference number: 5 (lower is better)
Translates to: TRGLSSCTSSSSFLI*TGYCHFHSPIICKL
Trigger: TAACTTACAGATAATTGGGCTGTGGAAATGGCAGTACCCTGTGCAAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGTCACCTCCATGTCCTaGTTCTTCTGTCTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSVTSMS*FFCLCC
Trigger: GCAGCAGAGACAGAAGAACAAGGACATGGAGGTGAC...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGAGCACCAGCCAACGTTaGCATTTCCGGCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQSTSQR*HFRPVS
Trigger: GCTGACTGGCCGGAAATGCAAACGTTGGCTGGTGCT...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTCGAGCAGCTCACGGTaGTTCATGATCGCACGCAAC +
Preference number: 5 (lower is better)
Translates to: IACSEKTAFKVPPSDGCESSSSR*FMIARN
Trigger: GTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGA...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGAGGTCGTAAGGATTaGGGAGATCTTCAGGTAACA +
Preference number: 5 (lower is better)
Translates to: ALRKQRLKFLHQMGVSGAGGRKD*GDLQVT
Trigger: TGTTACCTGAAGATCTCCCAAATCCTTACGACCTCC...TGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTTGTGTCAAGCTCCGGTaGCTGACGAGGGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSCVKLR*LTRAEA
Trigger: GGCCTCAGCCCTCGTCAGCAACCGGAGCTTGACACA...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATCTGGTCAGATGCCGGTaGCAGGAAAGGGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: FPLYALRYDGHFTDTESYLVRCR*QERAKE
Trigger: CTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCAG...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCCAGCAGCTTCCTTATTaGCACAGGGTACTGCCATTT +
Preference number: 5 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGQQLPY*HRVLPF
Trigger: AAATGGCAGTACCCTGTGCAAATAAGGAAGCTGCTG...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGATTACGACTCGGGGCTaGAGTAGCTGCACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEITTRG*SSCTSS
Trigger: GGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAAT...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp GTTCATGTTTTCAAAGATGCTAATGGACGTAGCCCAGGCCAGCGATaGTCCATAATACTCATGCAAGAGGAGTGCCAGACATTCCACGTT +
Preference number: 5 (lower is better)
Translates to: VHVFKDANGRSPGQR*SIILMQEECQTFHV
Trigger: AACGTGGAATGTCTGGCACTCCTCTTGCATGAGTATTATGGAGCATCGCTGGCCTGGGCTACGTCCATTAGCATCTTTGAAAACATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390649.8
ENST00000597673.1
ENST00000621651.4
CDS GCA 90 bp GCCAAACAAGAAACGCTTCATCCAAAGCGAGTGGATATGGAAGCCTaGCTGTTTAAGCTCCATGGACCTCTTTGTCTTCTCAACGTACAG +
Preference number: 5 (lower is better)
Translates to: AKQETLHPKRVDMEA*LFKLHGPLCLLNVQ
Trigger: CTGTACGTTGAGAAGACAAAGAGGTCCATGGAGCTTAAACAGGCAGGCTTCCATATCCACTCGCTTTGGATGAAGCGTTTCTTGTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp AAGATCCCTTTGACATCCACCCGAATTTTCCGCAAATACGGACAGTaGTGGAGGCAGAAGGAAGATGCTATCAAGTCCAGGTTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: KIPLTSTRIFRKYGQ*WRQKEDAIKSRFWL
Trigger: TAACCAGAACCTGGACTTGATAGCATCTTCCTTCTGCCTCCAGCACTGTCCGTATTTGCGGAAAATTCGGGTGGATGTCAAAGGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp CAGTGTTTTCAAAACTACGACGTACATCCTCCTCCTCAGCGAATTTaGTCATCACGTGACTCTTGTAGTCCCATGTGTCACCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: QCFQNYDVHPPPQRI*SSRDSCSPMCHLHV
Trigger: GACATGGAGGTGACACATGGGACTACAAGAGTCACGTGATGACCAAATTCGCTGAGGAGGAGGATGTACGTCGTAGTTTTGAAAACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCTGGTAGAGTCCACCTaGCGCCCAGCACAGCACGAT +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSLVEST*RPAQHD
Trigger: ATCGTGCTGTGCTGGGCGCAAGGTGGACTCTACCAG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCTGGGTGCCTCCCAAGTaGAGGGATCTTAGGTTACGG +
Preference number: 5 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIWVPPK*RDLRLR
Trigger: CCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCA...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAAGAAGCTTCACGCCATaGTCTTCCACAGGGTTCATG +
Preference number: 5 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSRSFTP*SSTGFM
Trigger: CATGAACCCTGTGGAAGACAATGGCGTGAAGCTTCT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 90 bp CACTATCTTGTTGCACAGCTTGTGAAATTCCTGGCACTTTTTCCTTaGTTGGTCCTTGGTCAGTCATCGTTGCTTCAGGATCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: HYLVAQLVKFLALFP*LVLGQSSLLQDLLV
Trigger: CACCAGAAGATCCTGAAGCAACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAGGAATTTCACAAGCTGTGCAACAAGATAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000597673.1
CDS-3UTR CAA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGGCACTTTTTCCTTGCTaGGTCCTTGGTCAGTCATCG +
Preference number: 5 (lower is better)
Translates to: IACSEKTAFKVPPSDGCEALFPC*VLGQSS
Trigger: CGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGC...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGAGCTTTGTGTCATTGTaGAGGACAGAGCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: IACSEKTAFKVPPSDGCESFVSL*RTEPRS
Trigger: TGACCTGGGCTCTGTCCTCAACAATGACACAAAGCT...CTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGCAGAGCTTTGTGTCATaGTTGAGGACAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQQSFVS*LRTEPR
Trigger: CCTGGGCTCTGTCCTCAACAATGACACAAAGCTCTG...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGACACGACCTCTGACTaGAGCTTCTCTGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSDTTSD*SFSVPT
Trigger: CGTGGGCACAGAGAAGCTCAAGTCAGAGGTCGTGTC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTACTCTTTCCTCCAGATaGAGACAGCGCCGGACCACG +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSTLSSR*RQRRTT
Trigger: CGTGGTCCGGCGCTGTCTCAATCTGGAGGAAAGAGT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTAGACTCCCCGAGTCCTaGAACCATGAGGTCGTCACC +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSRLPES*NHEVVT
Trigger: GGTGACGACCTCATGGTTCAAGGACTCGGGGAGTCT...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 90 bp TTCTTTTGTCTCTGCAGCTGTGGCACTATCTTGTTGCACAGCTTGTaGAATTCCTGGCACTTTTTCCTTGCTTGGTCCTTGGTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: FFCLCSCGTILLHSL*NSWHFFLAWSLVSH
Trigger: ATGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAGGAATTTCACAAGCTGTGCAACAAGATAGTGCCACAGCTGCAGAGACAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000597673.1
CDS CCA 90 bp TGCACAGCTTGTGAAATTCCTGGCACTTTTTCCTTGCTTGGTCCTTaGTCAGTCATCGTTGCTTCAGGATCTTCTGGTGAATGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: CTACEIPGTFSLLGP*SVIVASGSSGECLF
Trigger: GAAAAGACATTCACCAGAAGATCCTGAAGCAACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAGGAATTTCACAAGCTGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000597673.1
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGAGCAAGTGGATTCTTaGTTCCCCGGAGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQEQVDS*FPGDSS
Trigger: AGAGGAATCTCCGGGGAACAAAGAATCCACTTGCTC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGATCGCACGCAACCCTaGTGTCTTCTGATGCTCACC +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSDRTQP*CLLMLT
Trigger: GGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGGCTCCATGGACCTCTTaGTCTTCTCAACGTACAGAG +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQAPWTS*SSQRTE
Trigger: CTCTGTACGTTGAGAAGACAAAGAGGTCCATGGAGC...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAACAAACTCTTTGTCTaGAGTCTCGAAAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: CSEKTAFKVPPSDGCEWGNKLFV*SLEKTV
Trigger: CACTGTCTTTTCGAGACTCAAGACAAAGAGTTTGTT...GCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCGATCTTAGGTTACGGTaGGCCATGACGATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIDLRLR*AMTILQ
Trigger: CTGGAGAATCGTCATGGCCAACCGTAACCTAAGATC...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTCCGTACTCCAACAAACATTTaGGGTGTTTTAAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: KQRLKFLHQMGVSGAGFRTPTNI*GVLRLH
Trigger: GTGAAGCCTTAAAACACCCAAAATGTTTGTTGGAGT...ACGGAAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGAGAAGCTTCACGCCATaGTCTTCCACAGGGTTCATG +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQRSFTP*SSTGFM
Trigger: CATGAACCCTGTGGAAGACAATGGCGTGAAGCTTCT...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAGAAAACAGCGTTTAAAGTTCCTCCATCAGATGGGTGTGAGTGGGGCAGGTTTAGCTTCATCATTCCTTaGGGACTGAAGTTATTCTGC +
Preference number: 5 (lower is better)
Translates to: EKTAFKVPPSDGCEWGRFSFIIP*GLKLFC
Trigger: GCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCT...AAACCTGCCCCACTCACACCCATCTGATGGAGGAACTTTAAACGCTGTTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp ACTCCCAGGTGCATAGCTTGCTCTGAGAAAACAGCGTTTAAAGTTCCTCCATCAAATCATTCTCCATCTTaGAGAAGGAACTCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TPRCIACSEKTAFKVPPSNHSPS*RRNSQV
Trigger: CACCTGGGAGTTCCTTCTCAAAGATGGAGAATGATT...TGATGGAGGAACTTTAAACGCTGTTTTCTCAGAGCAAGCTATGCACCTGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCGCCAGACATTCCACGTaGGCATTCTCGATTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GHFTDTESYDLKVSSLQIARHST*AFSISN
Trigger: GTTTGAAATCGAGAATGCCAACGTGGAATGTCTGGC...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCAGAGCTTTGTGTCATaGTTGAGGACAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHQSFVS*LRTEPR
Trigger: CCTGGGCTCTGTCCTCAACAATGACACAAAGCTCTG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATGATCTTAGGTTACGGTaGGCCATGACGATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FPLYALRYDGHFTDTESYDLRLR*AMTILQ
Trigger: CTGGAGAATCGTCATGGCCAACCGTAACCTAAGATC...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATCAGAACACTGTTCTTTaGCTTCAGTCCCTCGCACAG +
Preference number: 5 (lower is better)
Translates to: FPLYALRYDGHFTDTESYQNTVL*LQSLAQ
Trigger: CTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCTG...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 90 bp TTATTTGAGTCAGAGATGTCTGGCACTTTTTCCTTGCTTGGTCCTTaGTCAGTCATCGTTGCTTCAGGATCTTCTGGTGAATGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LFESEMSGTFSLLGP*SVIVASGSSGECLF
Trigger: GAAAAGACATTCACCAGAAGATCCTGAAGCAACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAGACATCTCTGACTCAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCTCATAGAGACACCATaGCAGCCCGTAGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSLIETP*QPVAGK
Trigger: TTTTCCAGCTACGGGCTGCAATGGTGTCTCTATGAG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCTTGGTCAGTCATCGTaGCTTCAGGATCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSLGQSS*LQDLLV
Trigger: CACCAGAAGATCCTGAAGCAACGATGACTGACCAAG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATCTTGGTCAGTCATCGTaGCTTCAGGATCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHLGQSS*LQDLLV
Trigger: CACCAGAAGATCCTGAAGCAACGATGACTGACCAAG...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTTTCCTTGCTTGGTCCTaGGTCAGTCATCGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSFLAWS*VSHRCF
Trigger: GAAGCAACGATGACTGACCAAGGACCAAGCAAGGAA...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTTCCTTGCTTGGTCCTaGGTCAGTCATCGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHFLAWS*VSHRCF
Trigger: GAAGCAACGATGACTGACCAAGGACCAAGCAAGGAA...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTGAGCAAGTGGATTCTTaGTTCCCCGGAGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSEQVDS*FPGDSS
Trigger: AGAGGAATCTCCGGGGAACAAAGAATCCACTTGCTC...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATCTTGGGAAGATCCCTTaGACATCCACCCGAATTTTC +
Preference number: 5 (lower is better)
Translates to: FPLYALRYDGHFTDTESYLGKIP*TSTRIF
Trigger: GAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAAG...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATTCTCAGAACACTGTTCTTTaGCTTCAGTCCCTCGCACAG +
Preference number: 5 (lower is better)
Translates to: EHRRITTIEGFVRIRNHSQNTVL*LQSLAQ
Trigger: CTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCTG...AGAATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGGAGGTCGTAAGGATTaGGGAGATCTTCAGGTAACA +
Preference number: 5 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHGGRKD*GDLQVT
Trigger: TGTTACCTGAAGATCTCCCAAATCCTTACGACCTCC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATAATCATTCTCCATCTTaGAGAAGGAACTCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FPLYALRYDGHFTDTESYNHSPS*RRNSQV
Trigger: CACCTGGGAGTTCCTTCTCAAAGATGGAGAATGATT...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp TTCCCTCTATATGCTCTGAGATATGACGGACATTTCACAGATACTGAGTCCTATGAAAAGGTGAGCGATTaGTCTCCTTCCATCTTGATA +
Preference number: 5 (lower is better)
Translates to: FPLYALRYDGHFTDTESYEKVSD*SPSILI
Trigger: TATCAAGATGGAAGGAGACAAATCGCTCACCTTTTC...ATAGGACTCAGTATCTGTGAAATGTCCGTCATATCTCAGAGCATATAGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp GGACATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCAACAAACTCTTTGTCTaGAGTCTCGAAAAGACAGTG +
Preference number: 5 (lower is better)
Translates to: GHFTDTESYDLKVSSLQINKLFV*SLEKTV
Trigger: CACTGTCTTTTCGAGACTCAAGACAAAGAGTTTGTT...GATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp CATTTCACAGATACTGAGTCCTATGACTTGAAGGTCTCTAGCCTTCAAATCCAGACTCCAACAAACATTTaGGGTGTTTTAAGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: HFTDTESYDLKVSSLQIQTPTNI*GVLRLH
Trigger: GTGAAGCCTTAAAACACCCAAAATGTTTGTTGGAGT...CTGGATTTGAAGGCTAGAGACCTTCAAGTCATAGGACTCAGTATCTGTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATGAAAAGGTGAGCGATTaGTCTCCTTCCATCTTGATA +
Preference number: 5 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHEKVSD*SPSILI
Trigger: TATCAAGATGGAAGGAGACAAATCGCTCACCTTTTC...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS-3UTR CAA 90 bp AGTGAACACAGAAGAATCACTACCATTGAGGGCTTTGTGAGAATCAGAAATCATAGCTTCATCATTCCTTaGGGACTGAAGTTATTCTGC +
Preference number: 5 (lower is better)
Translates to: SEHRRITTIEGFVRIRNHSFIIP*GLKLFC
Trigger: GCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCT...ATGATTTCTGATTCTCACAAAGCCCTCAATGGTAGTGATTCTTCTGTGTTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp GCACAGGTGTGTCAAGCTCCGGTTGCTGACGAGGGCTaGGGCCAGACTCTGGCAACCCGTGGCTGTGATGCC +
Preference number: 6 (lower is better)
Translates to: AQVCQAPVADEG*GQTLATRGCDA
Trigger: GGCATCACAGCCACGGGTTGCCAGAGTCTGGCCTCAGCCCTCGTCAGCAACCGGAGCTTGACACACCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp ACGCAGATGAGAGAGCCCACGGCGGGCACCTGGCACTaGTCGAGCAGCTCACGGTTGTTCATGATCGCACGC +
Preference number: 6 (lower is better)
Translates to: TQMREPTAGTWH*SSSSRLFMIAR
Trigger: GCGTGCGATCATGAACAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGGGCTCTCTCATCTGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp AGGGCCACGCAGATGAGAGAGCCCACGGCGGGCACCTaGCACTGGTCGAGCAGCTCACGGTTGTTCATGATC +
Preference number: 6 (lower is better)
Translates to: RATQMREPTAGT*HWSSSSRLFMI
Trigger: GATCATGAACAACCGTGAGCTGCTCGACCAGTGCCAGGTGCCCGCCGTGGGCTCTCTCATCTGCGTGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp GCGCAGCAACCCCACCGTCACCCAGGGCATTGTCCGTaGGATCCAGGCTCTTCAGGTGTCTGCTCCTCGAGA +
Preference number: 6 (lower is better)
Translates to: AQQPHRHPGHCP*DPGSSGVCSSR
Trigger: TCTCGAGGAGCAGACACCTGAAGAGCCTGGATCTCACGGACAATGCCCTGGGTGACGGTGGGGTTGCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp CTGGCTAGAGCCGATTTCCCAATTCCTGACTTTCCGTaGAGAACCACCGTGCGAGGCCGGAAGCCCCACCGG +
Preference number: 6 (lower is better)
Translates to: LARADFPIPDFP*RTTVRGRKPHR
Trigger: CCGGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACGGAAAGTCAGGAATTGGGAAATCGGCTCTAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp AAGCTCCGGTTGCTGACGAGGGCTGAGGCCAGACTCTaGCAACCCGTGGCTGTGATGCCACAGTCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: KLRLLTRAEARL*QPVAVMPQSSS
Trigger: ACTGGAGGACTGTGGCATCACAGCCACGGGTTGCCAGAGTCTGGCCTCAGCCCTCGTCAGCAACCGGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp CGGCAGAAGCGCTTCAGGACAACTCTTTCCTCCAGATaGAGACAGCGCCGGACCACGCCTCGAGGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: RQKRFRTTLSSR*RQRRTTPRGVS
Trigger: GCTCACCCCTCGAGGCGTGGTCCGGCGCTGTCTCAATCTGGAGGAAAGAGTTGTCCTGAAGCGCTTCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp TCGCACAGCGCAGCAACCCCACCGTCACCCAGGGCATaGTCCGTGAGATCCAGGCTCTTCAGGTGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: SHSAATPPSPRA*SVRSRLFRCLL
Trigger: GAGCAGACACCTGAAGAGCCTGGATCTCACGGACAATGCCCTGGGTGACGGTGGGGTTGCTGCGCTGTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp TTCAGTCCCTCGCACAGCGCAGCAACCCCACCGTCACCCAGGGCATaGTCCGTGAGATCCAGGCTCTTCAGGTGTCTGCTCCTCGAGATC +
Preference number: 6 (lower is better)
Translates to: FSPSHSAATPPSPRA*SVRSRLFRCLLLEI
Trigger: GATCTCGAGGAGCAGACACCTGAAGAGCCTGGATCTCACGGACAATGCCCTGGGTGACGGTGGGGTTGCTGCGCTGTGCGAGGGACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp CAGAACCACCGTGCGAGGCCGGAAGCCCCACCGGTCTaGATCAAAAGCACCAGCCAACGTTTGCATTTCCGG +
Preference number: 6 (lower is better)
Translates to: QNHRARPEAPPV*IKSTSQRLHFR
Trigger: CCGGAAATGCAAACGTTGGCTGGTGCTTTTGATTCAGACCGGTGGGGCTTCCGGCCTCGCACGGTGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp GCCTTCAACCCGAGTCTCGCCAGAACACTGTTCTTTTaGTTCAGTCCCTCGCACAGCGCAGCAACCCCACCG +
Preference number: 6 (lower is better)
Translates to: AFNPSLARTLFF*FSPSHSAATPP
Trigger: CGGTGGGGTTGCTGCGCTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCTGGCGAGACTCGGGTTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp TCGGGACATGATCTCCGTCACCGGAGCCTGGGAGTCTaGCCACTCCCTGGAGATGAACTCTGTGACACTGCT +
Preference number: 6 (lower is better)
Translates to: SGHDLRHRSLGV*PLPGDELCDTA
Trigger: AGCAGTGTCACAGAGTTCATCTCCAGGGAGTGGCCAGACTCCCAGGCTCCGGTGACGGAGATCATGTCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp CTTTCTGGTCGGGACATGATCTCCGTCACCGGAGCCTaGGAGTCTGGCCACTCCCTGGAGATGAACTCTGTG +
Preference number: 6 (lower is better)
Translates to: LSGRDMISVTGA*ESGHSLEMNSV
Trigger: CACAGAGTTCATCTCCAGGGAGTGGCCAGACTCCCAGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp CAGTCCACATGCCTTCAACCCGAGTCTCGCCAGAACACTGTTCTTTaGCTTCAGTCCCTCGCACAGCGCAGCAACCCCACCGTCACCCAG +
Preference number: 6 (lower is better)
Translates to: QSTCLQPESRQNTVL*LQSLAQRSNPTVTQ
Trigger: CTGGGTGACGGTGGGGTTGCTGCGCTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCTGGCGAGACTCGGGTTGAAGGCATGTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp CTCGAAAAGACAGTGGAAGGCGTCCAGGGTGTCTCCTaGGGTGGTGGCATTAGGCTGCTGACCCAACAGAGA +
Preference number: 6 (lower is better)
Translates to: LEKTVEGVQGVS*GGGIRLLTQQR
Trigger: TCTCTGTTGGGTCAGCAGCCTAATGCCACCACCCCAGGAGACACCCTGGACGCCTTCCACTGTCTTTTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp TGCCTTCAACCCGAGTCTCGCCAGAACACTGTTCTTTaGCTTCAGTCCCTCGCACAGCGCAGCAACCCCACC +
Preference number: 6 (lower is better)
Translates to: CLQPESRQNTVL*LQSLAQRSNPT
Trigger: GGTGGGGTTGCTGCGCTGTGCGAGGGACTGAAGCAAAAGAACAGTGTTCTGGCGAGACTCGGGTTGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp GCACTGGTCGAGCAGCTCACGGTTGTTCATGATCGCACGCAACCCTaGTGTCTTCTGATGCTCACCAATCCCGCGCTCAAGGAGCAAGTG +
Preference number: 6 (lower is better)
Translates to: ALVEQLTVVHDRTQP*CLLMLTNPALKEQV
Trigger: CACTTGCTCCTTGAGCGCGGGATTGGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGACCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp GCACCTGGCACTGGTCGAGCAGCTCACGGTTGTTCATaGTCGCACGCAACCCTTGTGTCTTCTGATGCTCAC +
Preference number: 6 (lower is better)
Translates to: APGTGRAAHGCS*SHATLVSSDAH
Trigger: GTGAGCATCAGAAGACACAAGGGTTGCGTGCGATCATGAACAACCGTGAGCTGCTCGACCAGTGCCAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp TCCTTCAGGTGGGTGCCTCCCAAGTTGAGGGATCTTAGGTTACGGTaGGCCATGACGATTCTCCAGAGGTGCTGCACACCAGGGGTAATC +
Preference number: 6 (lower is better)
Translates to: SFRWVPPKLRDLRLR*AMTILQRCCTPGVI
Trigger: GATTACCCCTGGTGTGCAGCACCTCTGGAGAATCGTCATGGCCAACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCACCTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp CGGTTGTTCATGATCGCACGCAACCCTTGTGTCTTCTaGTGCTCACCAATCCCGCGCTCAAGGAGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: RLFMIARNPCVF*CSPIPRSRSKW
Trigger: CCACTTGCTCCTTGAGCGCGGGATTGGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATCATGAACAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp GAGCACGGAGCTCAGACTCCCCGAGTCCTTGAACCATaGGGTCGTCACCGTCAAACACTGACTTCCTATTCC +
Preference number: 6 (lower is better)
Translates to: EHGAQTPRVLEP*GRHRQTLTSYS
Trigger: GGAATAGGAAGTCAGTGTTTGACGGTGACGACCTCATGGTTCAAGGACTCGGGGAGTCTGAGCTCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp TCTGCAGGGCGCACTGGGAGACTCTCAAGGCATCACTaGGAGGCATTACTCCCTGGTCTGTCACCTTGTTTC +
Preference number: 6 (lower is better)
Translates to: SAGRTGRLSRHH*EALLPGLSPCF
Trigger: GAAACAAGGTGACAGACCAGGGAGTAATGCCTCTCAGTGATGCCTTGAGAGTCTCCCAGTGCGCCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp ATTTCCCAATTCCTGACTTTCCGTGCAGAACCACCGTaGGAGGCCGGAAGCCCCACCGGTCTGAATCAAAAG +
Preference number: 6 (lower is better)
Translates to: ISQFLTFRAEPP*EAGSPTGLNQK
Trigger: CTTTTGATTCAGACCGGTGGGGCTTCCGGCCTCGCACGGTGGTTCTGCACGGAAAGTCAGGAATTGGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp GGTCAGATGCCGGTTGCAGGAAAGGGCCAAGGAGAGTaGCTCACAGCAATCAGAAGTCAGTCCACATGCCTT +
Preference number: 6 (lower is better)
Translates to: GQMPVAGKGQGE*LTAIRSQSTCL
Trigger: AAGGCATGTGGACTGACTTCTGATTGCTGTGAGGCACTCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp AGAGTCCACCTTGCGCCCAGCACAGCACGATCCTTCTaGCTAGAGCCGATTTCCCAATTCCTGACTTTCCGT +
Preference number: 6 (lower is better)
Translates to: RVHLAPSTARSF*LEPISQFLTFR
Trigger: ACGGAAAGTCAGGAATTGGGAAATCGGCTCTAGCCAGAAGGATCGTGCTGTGCTGGGCGCAAGGTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp CCACAGTCCTCCAGTATCAGCTTCTGCAGGGCGCACTaGGAGACTCTCAAGGCATCACTGAGAGGCATTACT +
Preference number: 6 (lower is better)
Translates to: PQSSSISFCRAH*ETLKASLRGIT
Trigger: AGTAATGCCTCTCAGTGATGCCTTGAGAGTCTCCCAGTGCGCCCTGCAGAAGCTGATACTGGAGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp GAGCAGCTCACGGTTGTTCATGATCGCACGCAACCCTaGTGTCTTCTGATGCTCACCAATCCCGCGCTCAAG +
Preference number: 6 (lower is better)
Translates to: EQLTVVHDRTQP*CLLMLTNPALK
Trigger: CTTGAGCGCGGGATTGGTGAGCATCAGAAGACACAAGGGTTGCGTGCGATCATGAACAACCGTGAGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp TGGGTGCCTCCCAAGTTGAGGGATCTTAGGTTACGGTaGGCCATGACGATTCTCCAGAGGTGCTGCACACCA +
Preference number: 6 (lower is better)
Translates to: WVPPKLRDLRLR*AMTILQRCCTP
Trigger: TGGTGTGCAGCACCTCTGGAGAATCGTCATGGCCAACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp AGACTGCGTATGAGGGTGAACGGAGGCTGCTTCTCAGCCCAGTCTTaGCAGAGCTTTGTGTCATTGTTGAGGACAGAGCCCAGGTCATCG +
Preference number: 6 (lower is better)
Translates to: RLRMRVNGGCFSAQS*QSFVSLLRTEPRSS
Trigger: CGATGACCTGGGCTCTGTCCTCAACAATGACACAAAGCTCTGCAAAGACTGGGCTGAGAAGCAGCCTCCGTTCACCCTCATACGCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp CACGCCATCCTTACATCCTCTTCCTTCAGGTGGGTGCCTCCCAAGTaGAGGGATCTTAGGTTACGGTTGGCCATGACGATTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: HAILTSSSFRWVPPK*RDLRLRLAMTILQR
Trigger: CCTCTGGAGAATCGTCATGGCCAACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCACCTGAAGGAAGAGGATGTAAGGATGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp AGATCACACAGGACAGACTCTCACAGCACGCGGCGGTaGGATGACACTTTACCAACTCCAGGTCCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: RSHRTDSHSTRR*DDTLPTPGPGD
Trigger: ATCTCCAGGACCTGGAGTTGGTAAAGTGTCATCTCACCGCCGCGTGCTGTGAGAGTCTGTCCTGTGTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp GGGTGGGTGCCAAGCATGGAGCAGAAATCTTCCCACTaGTCCTCAATGAGGGTCTTATCCCGCATCCATAGA +
Preference number: 6 (lower is better)
Translates to: GWVPSMEQKSSH*SSMRVLSRIHR
Trigger: TCTATGGATGCGGGATAAGACCCTCATTGAGGAGCAGTGGGAAGATTTCTGCTCCATGCTTGGCACCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp GTCATCGAAACCGTCAATGATGAACAACAGCCTTTCTaGTCGGGACATGATCTCCGTCACCGGAGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: VIETVNDEQQPF*SGHDLRHRSLG
Trigger: TCCCAGGCTCCGGTGACGGAGATCATGTCCCGACCAGAAAGGCTGTTGTTCATCATTGACGGTTTCGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp GCTTCACACGCCATCCTTACATCCTCTTCCTTCAGGTaGGTGCCTCCCAAGTTGAGGGATCTTAGGTTACGG +
Preference number: 6 (lower is better)
Translates to: ASHAILTSSSFR*VPPKLRDLRLR
Trigger: CCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCACCTGAAGGAAGAGGATGTAAGGATGGCGTGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp ACCACAGGACATGCCTCAGCGGACTCATCTCTTGGGAAGATCCCTTaGACATCCACCCGAATTTTCCGCAAATACGGACAGTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: TTGHASADSSLGKIP*TSTRIFRKYGQCWR
Trigger: CCTCCAGCACTGTCCGTATTTGCGGAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAAGAGATGAGTCCGCTGAGGCATGTCCTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp GAGTCCTTGAACCATGAGGTCGTCACCGTCAAACACTaGCTTCCTATTCCACACTCCCTCCACAGCCATACG +
Preference number: 6 (lower is better)
Translates to: ESLNHEVVTVKH*LPIPHSLHSHT
Trigger: CGTATGGCTGTGGAGGGAGTGTGGAATAGGAAGTCAGTGTTTGACGGTGACGACCTCATGGTTCAAGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp CCATTGTCTTCCACAGGGTTCATGCTAAGGCTCAGGTaGGTCAGCCATGAGTTACCCATAAGCGCAAGTGCA +
Preference number: 6 (lower is better)
Translates to: PLSSTGFMLRLR*VSHELPISASA
Trigger: TGCACTTGCGCTTATGGGTAACTCATGGCTGACGCACCTGAGCCTTAGCATGAACCCTGTGGAAGACAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp CTGAAGTTATTCTGCACCAGGTTTAGACTGGTCAGATaGCGGTTGCAGGAAAGGGCCAAGGAGAGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: LKLFCTRFRLVR*RLQERAKESAS
Trigger: TGAGGCACTCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp CAACTACCGTCAATTACGACTCGGGGCTTGAGTAGCTaGACTTCCTCCAGCAGCTTCCTTATTTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: QLPSITTRGLSS*TSSSSFLICTG
Trigger: CCCTGTGCAAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAATTGACGGTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp TTATTCTGCACCAGGTTTAGACTGGTCAGATGCCGGTaGCAGGAAAGGGCCAAGGAGAGTGCCTCACAGCAA +
Preference number: 6 (lower is better)
Translates to: LFCTRFRLVRCR*QERAKESASQQ
Trigger: TTGCTGTGAGGCACTCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp GGACTGAAGTTATTCTGCACCAGGTTTAGACTGGTCAGATGCCGGTaGCAGGAAAGGGCCAAGGAGAGTGCCTCACAGCAATCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: GLKLFCTRFRLVRCR*QERAKESASQQSEV
Trigger: GACTTCTGATTGCTGTGAGGCACTCTCCTTGGCCCTTTCCTGCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp GGAGGCTGCTTCTCAGCCCAGTCTTTGCAGAGCTTTGTGTCATTGTaGAGGACAGAGCCCAGGTCATCGAAACCGTCAATGATGAACAAC +
Preference number: 6 (lower is better)
Translates to: GGCFSAQSLQSFVSL*RTEPRSSKPSMMNN
Trigger: GTTGTTCATCATTGACGGTTTCGATGACCTGGGCTCTGTCCTCAACAATGACACAAAGCTCTGCAAAGACTGGGCTGAGAAGCAGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp AACGGAGGCTGCTTCTCAGCCCAGTCTTTGCAGAGCTTTGTGTCATaGTTGAGGACAGAGCCCAGGTCATCGAAACCGTCAATGATGAAC +
Preference number: 6 (lower is better)
Translates to: NGGCFSAQSLQSFVS*LRTEPRSSKPSMMN
Trigger: GTTCATCATTGACGGTTTCGATGACCTGGGCTCTGTCCTCAACAATGACACAAAGCTCTGCAAAGACTGGGCTGAGAAGCAGCCTCCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp CACAGGGTTCATGCTAAGGCTCAGGTGCGTCAGCCATaGGTTACCCATAAGCGCAAGTGCAAGAAAACCACA +
Preference number: 6 (lower is better)
Translates to: HRVHAKAQVRQP*VTHKRKCKKTT
Trigger: TGTGGTTTTCTTGCACTTGCGCTTATGGGTAACTCATGGCTGACGCACCTGAGCCTTAGCATGAACCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp CCGCAAATACGGACAGTGCTGGAGGCAGAAGGAAGATaGTATCAAGTCCAGGTTCTGGTTAATCGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PQIRTVLEAEGR*YQVQVLVNRKP
Trigger: TGGCTTCCGATTAACCAGAACCTGGACTTGATAGCATCTTCCTTCTGCCTCCAGCACTGTCCGTATTTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp CATGCCTCAGCGGACTCATCTCTTGGGAAGATCCCTTaGACATCCACCCGAATTTTCCGCAAATACGGACAG +
Preference number: 6 (lower is better)
Translates to: HASADSSLGKIP*TSTRIFRKYGQ
Trigger: CTGTCCGTATTTGCGGAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAAGAGATGAGTCCGCTGAGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp CTTACATCCTCTTCCTTCAGGTGGGTGCCTCCCAAGTaGAGGGATCTTAGGTTACGGTTGGCCATGACGATT +
Preference number: 6 (lower is better)
Translates to: LTSSSFRWVPPK*RDLRLRLAMTI
Trigger: AATCGTCATGGCCAACCGTAACCTAAGATCCCTCAACTTGGGAGGCACCCACCTGAAGGAAGAGGATGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp ATGCCTCAGCGGACTCATCTCTTGGGAAGATCCCTTTaGCATCCACCCGAATTTTCCGCAAATACGGACAGT +
Preference number: 6 (lower is better)
Translates to: MPQRTHLLGRSL*HPPEFSANTDS
Trigger: ACTGTCCGTATTTGCGGAAAATTCGGGTGGATGTCAAAGGGATCTTCCCAAGAGATGAGTCCGCTGAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp TTCAAAGATGCTAATGGACGTAGCCCAGGCCAGCGATaGTCCATAATACTCATGCAAGAGGAGTGCCAGACA +
Preference number: 6 (lower is better)
Translates to: FKDANGRSPGQR*SIILMQEECQT
Trigger: TGTCTGGCACTCCTCTTGCATGAGTATTATGGAGCATCGCTGGCCTGGGCTACGTCCATTAGCATCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390649.8
ENST00000597673.1
ENST00000621651.4
CDS GCA 72 bp CTTAGGTTACGGTTGGCCATGACGATTCTCCAGAGGTaGTGCACACCAGGGGTAATCTGTGCATTTCTAAAC +
Preference number: 6 (lower is better)
Translates to: LRLRLAMTILQR*CTPGVICAFLN
Trigger: GTTTAGAAATGCACAGATTACCCCTGGTGTGCAGCACCTCTGGAGAATCGTCATGGCCAACCGTAACCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp ACGAGGCCAAACAAGAAACGCTTCATCCAAAGCGAGTaGATATGGAAGCCTGCCTGTTTAAGCTCCATGGAC +
Preference number: 6 (lower is better)
Translates to: TRPNKKRFIQSE*IWKPACLSSMD
Trigger: GTCCATGGAGCTTAAACAGGCAGGCTTCCATATCCACTCGCTTTGGATGAAGCGTTTCTTGTTTGGCCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp TTCTCAGCCCAGTCTTTGCAGAGCTTTGTGTCATTGTaGAGGACAGAGCCCAGGTCATCGAAACCGTCAATG +
Preference number: 6 (lower is better)
Translates to: FSAQSLQSFVSL*RTEPRSSKPSM
Trigger: CATTGACGGTTTCGATGACCTGGGCTCTGTCCTCAACAATGACACAAAGCTCTGCAAAGACTGGGCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp TTAGACGTGGGACAGGCAAAGGCCGAACACAGCTTCATCATTCCTTaGGGACTGAAGTTATTCTGCACCAGGTTTAGACTGGTCAGATGC +
Preference number: 6 (lower is better)
Translates to: LDVGQAKAEHSFIIP*GLKLFCTRFRLVRC
Trigger: GCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCTGTGTTCGGCCTTTGCCTGTCCCACGTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp TCTTCATCAAAAGAATGCCAACTACCGTCAATTACGACTCGGGGCTaGAGTAGCTGCACTTCCTCCAGCAGCTTCCTTATTTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: SSSKECQLPSITTRG*SSCTSSSSFLICTG
Trigger: CCCTGTGCAAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAATTGACGGTAGTTGGCATTCTTTTGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp CTCTGCAGCTGTGGCACTATCTTGTTGCACAGCTTGTaGAATTCCTGGCACTTTTTCCTTGCTTGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LCSCGTILLHSL*NSWHFFLAWSL
Trigger: CAAGGACCAAGCAAGGAAAAAGTGCCAGGAATTTCACAAGCTGTGCAACAAGATAGTGCCACAGCTGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000597673.1
CDS TCA 72 bp AAGAATGCCAACTACCGTCAATTACGACTCGGGGCTTaGGTAGCTGCACTTCCTCCAGCAGCTTCCTTATTT +
Preference number: 6 (lower is better)
Translates to: KNANYRQLRLGA*VAALPPAASLF
Trigger: AAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAATTGACGGTAGTTGGCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp GAAACGCTTCATCCAAAGCGAGTGGATATGGAAGCCTaGCTGTTTAAGCTCCATGGACCTCTTTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: ETLHPKRVDMEA*LFKLHGPLCLL
Trigger: GAGAAGACAAAGAGGTCCATGGAGCTTAAACAGGCAGGCTTCCATATCCACTCGCTTTGGATGAAGCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp CACAGCTTCATCATTCCTTTGGGACTGAAGTTATTCTaGACCAGGTTTAGACTGGTCAGATGCCGGTTGCAG +
Preference number: 6 (lower is better)
Translates to: HSFIIPLGLKLF*TRFRLVRCRLQ
Trigger: CTGCAACCGGCATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp TTGAGTAGCTGCACTTCCTCCAGCAGCTTCCTTATTTaGACAGGGTACTGCCATTTCCACAGCCCAATTATC +
Preference number: 6 (lower is better)
Translates to: LSSCTSSSSFLI*TGYCHFHSPII
Trigger: GATAATTGGGCTGTGGAAATGGCAGTACCCTGTGCAAATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CCA 72 bp CAAAACTACGACGTACATCCTCCTCCTCAGCGAATTTaGTCATCACGTGACTCTTGTAGTCCCATGTGTCAC +
Preference number: 6 (lower is better)
Translates to: QNYDVHPPPQRI*SSRDSCSPMCH
Trigger: GTGACACATGGGACTACAAGAGTCACGTGATGACCAAATTCGCTGAGGAGGAGGATGTACGTCGTAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp GGACAGGCAAAGGCCGAACACAGCTTCATCATTCCTTaGGGACTGAAGTTATTCTGCACCAGGTTTAGACTG +
Preference number: 6 (lower is better)
Translates to: GQAKAEHSFIIP*GLKLFCTRFRL
Trigger: CAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCTGTGTTCGGCCTTTGCCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 72 bp AAAGAATGCCAACTACCGTCAATTACGACTCGGGGCTaGAGTAGCTGCACTTCCTCCAGCAGCTTCCTTATT +
Preference number: 6 (lower is better)
Translates to: KECQLPSITTRG*SSCTSSSSFLI
Trigger: AATAAGGAAGCTGCTGGAGGAAGTGCAGCTACTCAAGCCCCGAGTCGTAATTGACGGTAGTTGGCATTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp AAGCTGTTTAATGCCAAGCGAACAAACTCTTTGTCTTaGGTCTCGAAAAGACAGTGGAAGGCGTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: KLFNAKRTNSLS*VSKRQWKASRV
Trigger: CACCCTGGACGCCTTCCACTGTCTTTTCGAGACTCAAGACAAAGAGTTTGTTCGCTTGGCATTAAACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS GCA 72 bp GTTGCACAGCTTGTGAAATTCCTGGCACTTTTTCCTTaGTTGGTCCTTGGTCAGTCATCGTTGCTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: VAQLVKFLALFP*LVLGQSSLLQD
Trigger: ATCCTGAAGCAACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAGGAATTTCACAAGCTGTGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000597673.1
CDS CCA 72 bp TGGAGGCAGAAGGAAGATGCTATCAAGTCCAGGTTCTaGTTAATCGGAAGCCACACTTCTTGGAAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: WRQKEDAIKSRF*LIGSHTSWKLF
Trigger: AAACAGCTTCCAAGAAGTGTGGCTTCCGATTAACCAGAACCTGGACTTGATAGCATCTTCCTTCTGCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS TCA 72 bp CAAAGGCCGAACACAGCTTCATCATTCCTTTGGGACTaGAGTTATTCTGCACCAGGTTTAGACTGGTCAGAT +
Preference number: 6 (lower is better)
Translates to: QRPNTASSFLWD*SYSAPGLDWSD
Trigger: ATCTGACCAGTCTAAACCTGGTGCAGAATAACTTCAGTCCCAAAGGAATGATGAAGCTGTGTTCGGCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4
CDS CAA 90 bp TATCTTGTTGCACAGCTTGTGAAATTCCTGGCACTTTTTCCTTGCTaGGTCCTTGGTCAGTCATCGTTGCTTCAGGATCTTCTGGTGAAT +
Preference number: 6 (lower is better)
Translates to: YLVAQLVKFLALFPC*VLGQSSLLQDLLVN
Trigger: ATTCACCAGAAGATCCTGAAGCAACGATGACTGACCAAGGACCAAGCAAGGAAAAAGTGCCAGGAATTTCACAAGCTGTGCAACAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000597673.1
CDS CCA 72 bp AAGTCCAGGTTCTGGTTAATCGGAAGCCACACTTCTTaGAAGCTGTTTAATGCCAAGCGAACAAACTCTTTG +
Preference number: 6 (lower is better)
Translates to: KSRFWLIGSHTS*KLFNAKRTNSL
Trigger: CAAAGAGTTTGTTCGCTTGGCATTAAACAGCTTCCAAGAAGTGTGGCTTCCGATTAACCAGAACCTGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390649.8
ENST00000621651.4