Pregenerated sensors for NLRP4 (Homo sapiens)
Ensembl gene IDs: ENSG00000160505Ensembl transcript IDs: ENST00000301295.11, ENST00000587464.1, ENST00000587891.5, ENST00000589437.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACCAGGTCACAAAGGTCGACTCGCTGAGGGTGCTGTCCTGCACCTaGAGCTCTCTGAGGTGCCCGCTGGTGGTGAGCACAGAGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: HQVTKVDSLRVLSCT*SSLRCPLVVSTEQM Trigger: CATCTGCTCTGTGCTCACCACCAGCGGGCACCTCAGAGAGCTCCAGGTGCAGGACAGCACCCTCAGCGAGTCGACCTTTGTGACCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 90 bp | TGGTTACACCAGGTCACAAAGGTCGACTCGCTGAGGGTGCTGTCCTaGACCTGGAGCTCTCTGAGGTGCCCGCTGGTGGTGAGCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: WLHQVTKVDSLRVLS*TWSSLRCPLVVSTE Trigger: CTCTGTGCTCACCACCAGCGGGCACCTCAGAGAGCTCCAGGTGCAGGACAGCACCCTCAGCGAGTCGACCTTTGTGACCTGGTGTAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 90 bp | GGTGGCAGAAAGCCAACATCAGGTATACCAGGACCGTGTCTGGGCTaGACAGGGCTTCACACAAAAGGGGCACGCCTGTGTCTAACTGGT | + |
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Preference number: 5 (lower is better) Translates to: GGRKPTSGIPGPCLG*TGLHTKGARLCLTG Trigger: ACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAGCCCTGTGCAGCCCAGACACGGTCCTGGTATACCTGATGTTGGCTTTCTGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 90 bp | CACTCTGGGTGTCTCAGGGCCTCACAGAGTACAACCACCCCTGTGTaGTCCAAGGTGTTCAAGGTCAGGTTGAGCTGCTGCAGGGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: HSGCLRASQSTTTPV*SKVFKVRLSCCRVL Trigger: TAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGGGGTGGTTGTACTCTGTGAGGCCCTGAGACACCCAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 90 bp | ACCACCCCTGTGTGGTCCAAGGTGTTCAAGGTCAGGTTGAGCTGCTaGAGGGTCTTACTGCAGGTGAGAACAGACGCGAGATCCTTACAG | + |
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Preference number: 5 (lower is better) Translates to: TTPVWSKVFKVRLSC*RVLLQVRTDARSLQ Trigger: CTGTAAGGATCTCGCGTCTGTTCTCACCTGCAGTAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGGGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS TCA 90 bp | TGCAGCTCTTCGAAGCTGTCGATGACGAACAAGAGTCTCTCCGGTTaGGACACGATCTCTGTTATAGGAGCAGCGGGGTCAGGCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: CSSSKLSMTNKSLSG*DTISVIGAAGSGHS Trigger: AGAGTGGCCTGACCCCGCTGCTCCTATAACAGAGATCGTGTCTCAACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGAAGAGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 90 bp | ATCAAGTCACCACACAGATCCGAATCGGGTTCGTTCAAGCCGCCCTaGAGCTCTTCGAAGCTGTCGATGACGAACAAGAGTCTCTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: IKSPHRSESGSFKPP*SSSKLSMTNKSLSG Trigger: ACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGAAGAGCTGCAGGGCGGCTTGAACGAACCCGATTCGGATCTGTGTGGTGACTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 90 bp | ACAACCACCCCTGTGTGGTCCAAGGTGTTCAAGGTCAGGTTGAGCTaGTGCAGGGTCTTACTGCAGGTGAGAACAGACGCGAGATCCTTA | + |
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Preference number: 5 (lower is better) Translates to: TTTPVWSKVFKVRLS*CRVLLQVRTDARSL Trigger: TAAGGATCTCGCGTCTGTTCTCACCTGCAGTAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGGGGTGGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CCA 90 bp | AGCGGGGTCAGGCCACTCTCTGGAAATCAAGTCAGCCAAACTCGTTaGCGGCAACTCCCTCAGTTCTCTGCAGCAGAAATAGAACGTGTA | + |
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Preference number: 5 (lower is better) Translates to: SGVRPLSGNQVSQTR*RQLPQFSAAEIERV Trigger: TACACGTTCTATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTGACTTGATTTCCAGAGAGTGGCCTGACCCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 90 bp | AACCCACATTCTTCCAACCCAAGAATCTCTAAGCGGCAATCCGTATaGGTCAGAGCCCGACACAACAGCTGCACACCCACATCTCCGATT | + |
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Preference number: 5 (lower is better) Translates to: NPHSSNPRISKRQSV*VRARHNSCTPTSPI Trigger: AATCGGAGATGTGGGTGTGCAGCTGTTGTGTCGGGCTCTGACGCATACGGATTGCCGCTTAGAGATTCTTGGGTTGGAAGAATGTGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS TCA 90 bp | CCTCGCAGAGAGTTTTCAGTCCTTCGTCCTTCAGGACATTGGCACTaGGGTCTAGATAGCGCACGCTCTTGTTACGCAGAAGCATTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PRREFSVLRPSGHWH*GLDSARSCYAEAFQ Trigger: CTGAAATGCTTCTGCGTAACAAGAGCGTGCGCTATCTAGACCTCAGTGCCAATGTCCTGAAGGACGAAGGACTGAAAACTCTCTGCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 90 bp | AGAGACAGTAAAATATCGCCAAGGAATCCACCTGTCCCTGAGGATTaGCACGCTCCCCTAAGCTCTTCAGGCACTGGTGAATTTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RDSKISPRNPPVPED*HAPLSSSGTGEFAA Trigger: AGCAGCAAATTCACCAGTGCCTGAAGAGCTTAGGGGAGCGTGGCAATCCTCAGGGACAGGTGGATTCCTTGGCGATATTTTACTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 90 bp | ACGCTCTTGTTACGCAGAAGCATTTCAGAGATGTATTCGCAGCACTaGTCGCTGAGGTGGCAGAAAGCCAACATCAGGTATACCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: TLLLRRSISEMYSQH*SLRWQKANIRYTRT Trigger: GGTCCTGGTATACCTGATGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAATGCTTCTGCGTAACAAGAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 90 bp | ATCTCTAAGCGGCAATCCGTATGCGTCAGAGCCCGACACAACAGCTaGACACCCACATCTCCGATTTCATTGCACCCAATTTGCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: ISKRQSVCVRARHNS*TPTSPISLHPICRI Trigger: GATTCTGCAAATTGGGTGCAATGAAATCGGAGATGTGGGTGTGCAGCTGTTGTGTCGGGCTCTGACGCATACGGATTGCCGCTTAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 90 bp | ACGCTCTTGTTACGCAGAAGCATTTCAGAGATGTATTCGCAGCACTaGTCGCTGAGGTGGCAGAAAGCCAACGCTAGCTCTTTGACGTTG | + |
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Preference number: 5 (lower is better) Translates to: TLLLRRSISEMYSQH*SLRWQKANASSLTL Trigger: CAACGTCAAAGAGCTAGCGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAATGCTTCTGCGTAACAAGAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589437.1 |
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| CDS CCA 90 bp | TGGGAGGCACCTTATAAACACAGGGCGTTCATCTACCCCACTAACTaGAGAGAAGGAAAACGCTGGGTAAATAGAATGGAGAGGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: WEAPYKHRAFIYPTN*REGKRWVNRMERPG Trigger: GCCAGGCCTCTCCATTCTATTTACCCAGCGTTTTCCTTCTCTCCAGTTAGTGGGGTAGATGAACGCCCTGTGTTTATAAGGTGCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301295.11 |
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| CDS CCA 90 bp | GGGCTGCACAGGGCTTCACACAAAAGGGGCACGCCTGTGTCTAACTaGTTGCAGGATACATTCAGATACGTCAGCTTCTTGTTGTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GLHRASHKRGTPVSN*LQDTFRYVSFLLLV Trigger: AACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAGCCCTGTGCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 90 bp | CAGAAAAGGAAACGTTATTTATTCCAAGCTTCTGAAGGCGACAGCTaGGATGCCTCAGCTGGTTACACCAGGTCACAAAGGTCGACTCGC | + |
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Preference number: 5 (lower is better) Translates to: QKRKRYLFQASEGDS*DASAGYTRSQRSTR Trigger: GCGAGTCGACCTTTGTGACCTGGTGTAACCAGCTGAGGCATCCCAGCTGTCGCCTTCAGAAGCTTGGAATAAATAACGTTTCCTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS TCA 90 bp | ATCAGCTTCATCAGGAGTGTCGTTTTTCCAATTCCTTGTGGTCCTTaGATGATCACTGTACGTGGCTGTTTCCCAGCTTCCTTGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: ISFIRSVVFPIPCGP*MITVRGCFPASLGA Trigger: TGCTCCCAAGGAAGCTGGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 90 bp | AAATCAAGTCAGCCAAACTCGTTGGCGGCAACTCCCTCAGTTCTCTaGAGCAGAAATAGAACGTGTACAGGAACCTATCCCGAAAGATCT | + |
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Preference number: 5 (lower is better) Translates to: KSSQPNSLAATPSVL*SRNRTCTGTYPERS Trigger: AGATCTTTCGGGATAGGTTCCTGTACACGTTCTATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTGACTTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 90 bp | TGCACAGGGCTTCACACAAAAGGGGCACGCCTGTGTCTAACTGGTTaGAGGATACATTCAGATACGTCAGCTTCTTGTTGTTGGTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: CTGLHTKGARLCLTG*RIHSDTSASCCWLE Trigger: TTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAGCCCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 90 bp | GGCCATCATCAGCTTCATCAGGAGTGTCGTTTTTCCAATTCCTTGTaGTCCTTGAATGATCACTGTACGTGGCTGTTTCCCAGCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GHHQLHQECRFSNSL*SLNDHCTWLFPSFL Trigger: AAGGAAGCTGGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTGATGATGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS TCA 90 bp | GCTTCATCAGGAGTGTCGTTTTTCCAATTCCTTGTGGTCCTTGAATaGTCACTGTACGTGGCTGTTTCCCAGCTTCCTTGGGAGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: ASSGVSFFQFLVVLE*SLYVAVSQLPWEQK Trigger: TTTTTGCTCCCAAGGAAGCTGGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 90 bp | CTAACTGGTTGCAGGATACATTCAGATACGTCAGCTTCTTGTTGTTaGTTAGAAGGCCAGCAAGGACTTCACAATCAATGGGTGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LTGCRIHSDTSASCC*LEGQQGLHNQWVRG Trigger: ACCTCTCACCCATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | ACAAAGGTCGACTCGCTGAGGGTGCTGTCCTGCACCTaGAGCTCTCTGAGGTGCCCGCTGGTGGTGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: TKVDSLRVLSCT*SSLRCPLVVST Trigger: TGTGCTCACCACCAGCGGGCACCTCAGAGAGCTCCAGGTGCAGGACAGCACCCTCAGCGAGTCGACCTTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 72 bp | AGCTCTCACGCTCCCCGTACTTCAGAAGTATCTTGGTaGCCAGCAGCGCAGGGATGTCAGCGTCAACAACCC | + |
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Preference number: 6 (lower is better) Translates to: SSHAPRTSEVSW*PAAQGCQRQQP Trigger: GGGTTGTTGACGCTGACATCCCTGCGCTGCTGGGCACCAAGATACTTCTGAAGTACGGGGAGCGTGAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | GCAGAAAGCCAACATCAGGTATACCAGGACCGTGTCTaGGCTGCACAGGGCTTCACACAAAAGGGGCACGCC | + |
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Preference number: 6 (lower is better) Translates to: AESQHQVYQDRV*AAQGFTQKGHA Trigger: GGCGTGCCCCTTTTGTGTGAAGCCCTGTGCAGCCCAGACACGGTCCTGGTATACCTGATGTTGGCTTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS TCA 72 bp | ATCACTCTCGTTGAATCCCCGGGGCTGGTAGATTTCTaGGATCGTCACCTGATCCCGGAGCTCCTTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ITLVESPGLVDF*DRHLIPELLRA Trigger: TGCCCGAAGGAGCTCCGGGATCAGGTGACGATCTCAGAAATCTACCAGCCCCGGGGATTCAACGAGAGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | CCTGTGTGGTCCAAGGTGTTCAAGGTCAGGTTGAGCTaGTGCAGGGTCTTACTGCAGGTGAGAACAGACGCG | + |
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Preference number: 6 (lower is better) Translates to: PVWSKVFKVRLS*CRVLLQVRTDA Trigger: CGCGTCTGTTCTCACCTGCAGTAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CCA 72 bp | TGTCTCAGGGCCTCACAGAGTACAACCACCCCTGTGTaGTCCAAGGTGTTCAAGGTCAGGTTGAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CLRASQSTTTPV*SKVFKVRLSCC Trigger: GCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGGGGTGGTTGTACTCTGTGAGGCCCTGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CAA 90 bp | CTGCAGCTCTTCGAAGCTGTCGATGACGAACAAGAGTCTCTCCGGTaGAGACACGATCTCTGTTATAGGAGCAGCGGGGTCAGGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: LQLFEAVDDEQESLR*RHDLCYRSSGVRPL Trigger: GAGTGGCCTGACCCCGCTGCTCCTATAACAGAGATCGTGTCTCAACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGAAGAGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CAGAGTACAACCACCCCTGTGTGGTCCAAGGTGTTCAAGGTCAGGTaGAGCTGCTGCAGGGTCTTACTGCAGGTGAGAACAGACGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: QSTTTPVWSKVFKVR*SCCRVLLQVRTDAR Trigger: TCTCGCGTCTGTTCTCACCTGCAGTAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGGGGTGGTTGTACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS TCA 72 bp | CGTTCAAGCCGCCCTGCAGCTCTTCGAAGCTGTCGATaGCGAACAAGAGTCTCTCCGGTTGAGACACGATCT | + |
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Preference number: 6 (lower is better) Translates to: RSSRPAALRSCR*RTRVSPVETRS Trigger: AGATCGTGTCTCAACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGAAGAGCTGCAGGGCGGCTTGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | CCACACAGATCCGAATCGGGTTCGTTCAAGCCGCCCTaGAGCTCTTCGAAGCTGTCGATGACGAACAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: PHRSESGSFKPP*SSSKLSMTNKS Trigger: ACTCTTGTTCGTCATCGACAGCTTCGAAGAGCTGCAGGGCGGCTTGAACGAACCCGATTCGGATCTGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | GTGTGGTCCAAGGTGTTCAAGGTCAGGTTGAGCTGCTaGAGGGTCTTACTGCAGGTGAGAACAGACGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: VWSKVFKVRLSC*RVLLQVRTDAR Trigger: TCTCGCGTCTGTTCTCACCTGCAGTAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CAA 72 bp | ACCACCCCTGTGTGGTCCAAGGTGTTCAAGGTCAGGTaGAGCTGCTGCAGGGTCTTACTGCAGGTGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: TTPVWSKVFKVR*SCCRVLLQVRT Trigger: TGTTCTCACCTGCAGTAAGACCCTGCAGCAGCTCAACCTGACCTTGAACACCTTGGACCACACAGGGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CAA 90 bp | CAGCGGGGTCAGGCCACTCTCTGGAAATCAAGTCAGCCAAACTCGTaGGCGGCAACTCCCTCAGTTCTCTGCAGCAGAAATAGAACGTGT | + |
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Preference number: 6 (lower is better) Translates to: QRGQATLWKSSQPNS*AATPSVLCSRNRTC Trigger: ACACGTTCTATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTGACTTGATTTCCAGAGAGTGGCCTGACCCCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | CAGGTCAGGGCCAGGTCTTTTCCTTTCTGCATCTCTTaGTTCAGACTGGTACACAGGATCCAGCAGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QVRARSFPFCIS*FRLVHRIQQRS Trigger: GCTCCTCTGCTGGATCCTGTGTACCAGTCTGAAGCAAGAGATGCAGAAAGGAAAAGACCTGGCCCTGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | CGGCAATCCGTATGCGTCAGAGCCCGACACAACAGCTaGACACCCACATCTCCGATTTCATTGCACCCAATT | + |
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Preference number: 6 (lower is better) Translates to: RQSVCVRARHNS*TPTSPISLHPI Trigger: AATTGGGTGCAATGAAATCGGAGATGTGGGTGTGCAGCTGTTGTGTCGGGCTCTGACGCATACGGATTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 72 bp | TCTTCCAACCCAAGAATCTCTAAGCGGCAATCCGTATaGGTCAGAGCCCGACACAACAGCTGCACACCCACA | + |
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Preference number: 6 (lower is better) Translates to: SSNPRISKRQSV*VRARHNSCTPT Trigger: TGTGGGTGTGCAGCTGTTGTGTCGGGCTCTGACGCATACGGATTGCCGCTTAGAGATTCTTGGGTTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS TCA 72 bp | TCGAAGCTGTCGATGACGAACAAGAGTCTCTCCGGTTaGGACACGATCTCTGTTATAGGAGCAGCGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SKLSMTNKSLSG*DTISVIGAAGS Trigger: TGACCCCGCTGCTCCTATAACAGAGATCGTGTCTCAACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | CAGCCAAACTCGTTGGCGGCAACTCCCTCAGTTCTCTaGAGCAGAAATAGAACGTGTACAGGAACCTATCCC | + |
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Preference number: 6 (lower is better) Translates to: QPNSLAATPSVL*SRNRTCTGTYP Trigger: GGGATAGGTTCCTGTACACGTTCTATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | AAAATATCGCCAAGGAATCCACCTGTCCCTGAGGATTaGCACGCTCCCCTAAGCTCTTCAGGCACTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KISPRNPPVPED*HAPLSSSGTGE Trigger: TTCACCAGTGCCTGAAGAGCTTAGGGGAGCGTGGCAATCCTCAGGGACAGGTGGATTCCTTGGCGATATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CAA 72 bp | CAGGCCACTCTCTGGAAATCAAGTCAGCCAAACTCGTaGGCGGCAACTCCCTCAGTTCTCTGCAGCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: QATLWKSSQPNS*AATPSVLCSRN Trigger: ATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTGACTTGATTTCCAGAGAGTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 72 bp | TTCGAAGCTGTCGATGACGAACAAGAGTCTCTCCGGTaGAGACACGATCTCTGTTATAGGAGCAGCGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: FEAVDDEQESLR*RHDLCYRSSGV Trigger: GACCCCGCTGCTCCTATAACAGAGATCGTGTCTCAACCGGAGAGACTCTTGTTCGTCATCGACAGCTTCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS TCA 72 bp | GGATTGCCACGCTCCCCTAAGCTCTTCAGGCACTGGTaGATTTGCTGCTTTATCTCTTGGGACAGTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GLPRSPKLFRHW*ICCFISWDSWK Trigger: CTTCCAACTGTCCCAAGAGATAAAGCAGCAAATTCACCAGTGCCTGAAGAGCTTAGGGGAGCGTGGCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 72 bp | TTACGCAGAAGCATTTCAGAGATGTATTCGCAGCACTaGTCGCTGAGGTGGCAGAAAGCCAACGCTAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRRSISEMYSQH*SLRWQKANASS Trigger: AGAGCTAGCGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAATGCTTCTGCGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589437.1 |
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| CDS CCA 72 bp | AGGCCACTCTCTGGAAATCAAGTCAGCCAAACTCGTTaGCGGCAACTCCCTCAGTTCTCTGCAGCAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: RPLSGNQVSQTR*RQLPQFSAAEI Trigger: TATTTCTGCTGCAGAGAACTGAGGGAGTTGCCGCCAACGAGTTTGGCTGACTTGATTTCCAGAGAGTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | ATTTCAGAGATGTATTCGCAGCACTGCTCGCTGAGGTaGCAGAAAGCCAACATCAGGTATACCAGGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: ISEMYSQHCSLR*QKANIRYTRTV Trigger: CACGGTCCTGGTATACCTGATGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | ATTTCAGAGATGTATTCGCAGCACTGCTCGCTGAGGTaGCAGAAAGCCAACGCTAGCTCTTTGACGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ISEMYSQHCSLR*QKANASSLTLP Trigger: AGGCAACGTCAAAGAGCTAGCGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589437.1 |
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| CDS TCA 72 bp | AGGCCAGCAAGGACTTCACAATCAATGGGTGAGAGGTaGCAATTTACCAGCGCTAGCTCTTTGACGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RPARTSQSMGER*QFTSASSLTLP Trigger: AGGCAACGTCAAAGAGCTAGCGCTGGTAAATTGTCACCTCTCACCCATTGATTGTGAAGTCCTTGCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS TCA 72 bp | GAAGCATTTCAGAGATGTATTCGCAGCACTGCTCGCTaGGGTGGCAGAAAGCCAACATCAGGTATACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EAFQRCIRSTAR*GGRKPTSGIPG Trigger: TCCTGGTATACCTGATGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | AGGGCTTCACACAAAAGGGGCACGCCTGTGTCTAACTaGTTGCAGGATACATTCAGATACGTCAGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RASHKRGTPVSN*LQDTFRYVSFL Trigger: CAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CATCAGCTTCATCAGGAGTGTCGTTTTTCCAATTCCTTGTGGTCCTaGAATGATCACTGTACGTGGCTGTTTCCCAGCTTCCTTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HQLHQECRFSNSLWS*NDHCTWLFPSFLGS Trigger: GCTCCCAAGGAAGCTGGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CCAGGCCATCATCAGCTTCATCAGGAGTGTCGTTTTTCCAATTCCTaGTGGTCCTTGAATGATCACTGTACGTGGCTGTTTCCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGHHQLHQECRFSNS*WSLNDHCTWLFPSF Trigger: GAAGCTGGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTGATGATGGCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CTGCACAGGGCTTCACACAAAAGGGGCACGCCTGTGTCTAACTGGTaGCAGGATACATTCAGATACGTCAGCTTCTTGTTGTTGGTTAGA | + |
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Preference number: 6 (lower is better) Translates to: LHRASHKRGTPVSNW*QDTFRYVSFLLLVR Trigger: TCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAGCCCTGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CACATCTCCGATTTCATTGCACCCAATTTGCAGAATCTTCAGGTTTaGATTGCTGATGAGAGCAGAGGCGAGGTCTTCACAGCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HISDFIAPNLQNLQV*IADESRGEVFTASS Trigger: GCTGCTGGCTGTGAAGACCTCGCCTCTGCTCTCATCAGCAATCAAAACCTGAAGATTCTGCAAATTGGGTGCAATGAAATCGGAGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS TCA 72 bp | CTGCTTTGCGTGAGCTTGATAGGTCTTTGTGTATCCTaGGTCAGTGAGGGCAAGAGGAGAGAAAACCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LLCVSLIGLCVS*VSEGKRRENPQ Trigger: TTGTGGGTTTTCTCTCCTCTTGCCCTCACTGACTCAGGATACACAAAGACCTATCAAGCTCACGCAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587891.5 |
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| CDS GCA 72 bp | TTACGCAGAAGCATTTCAGAGATGTATTCGCAGCACTaGTCGCTGAGGTGGCAGAAAGCCAACATCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LRRSISEMYSQH*SLRWQKANIRY Trigger: ATACCTGATGTTGGCTTTCTGCCACCTCAGCGAGCAGTGCTGCGAATACATCTCTGAAATGCTTCTGCGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | AAACGTTATTTATTCCAAGCTTCTGAAGGCGACAGCTaGGATGCCTCAGCTGGTTACACCAGGTCACAAAGG | + |
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Preference number: 6 (lower is better) Translates to: KRYLFQASEGDS*DASAGYTRSQR Trigger: CCTTTGTGACCTGGTGTAACCAGCTGAGGCATCCCAGCTGTCGCCTTCAGAAGCTTGGAATAAATAACGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CAA 72 bp | GCTTCACACAAAAGGGGCACGCCTGTGTCTAACTGGTaGCAGGATACATTCAGATACGTCAGCTTCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ASHKRGTPVSNW*QDTFRYVSFLL Trigger: CAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | ACACAACAGCTGCACACCCACATCTCCGATTTCATTGCACCCAATTaGCAGAATCTTCAGGTTTTGATTGCTGATGAGAGCAGAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TQQLHTHISDFIAPN*QNLQVLIADESRGE Trigger: CTCGCCTCTGCTCTCATCAGCAATCAAAACCTGAAGATTCTGCAAATTGGGTGCAATGAAATCGGAGATGTGGGTGTGCAGCTGTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS GCA 72 bp | CTTCACACAAAAGGGGCACGCCTGTGTCTAACTGGTTaGAGGATACATTCAGATACGTCAGCTTCTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LHTKGARLCLTG*RIHSDTSASCC Trigger: ACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGGCGTGCCCCTTTTGTGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | CAGCTTCATCAGGAGTGTCGTTTTTCCAATTCCTTGTaGTCCTTGAATGATCACTGTACGTGGCTGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QLHQECRFSNSL*SLNDHCTWLFP Trigger: GGGAAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CCA 72 bp | TGTTGGTTAGAAGGCCAGCAAGGACTTCACAATCAATaGGTGAGAGGTGACAATTTACCAGCGCTAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CWLEGQQGLHNQ*VRGDNLPALAL Trigger: AAGAGCTAGCGCTGGTAAATTGTCACCTCTCACCCATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | AGAAACCACCAAGTCCACGTTGTCAATAATATGAAAGTTAGCTTCTaGGAGGAGGTTCACTGCCTGCTTCACAAAGGCAGGATCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RNHQVHVVNNMKVSF*EEVHCLLHKGRILH Trigger: ATGCAGGATCCTGCCTTTGTGAAGCAGGCAGTGAACCTCCTCCAAGAAGCTAACTTTCATATTATTGACAACGTGGACTTGGTGGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CAA 90 bp | TCTAACTGGTTGCAGGATACATTCAGATACGTCAGCTTCTTGTTGTaGGTTAGAAGGCCAGCAAGGACTTCACAATCAATGGGTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SNWLQDTFRYVSFLL*VRRPARTSQSMGER Trigger: CCTCTCACCCATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | GTGTCTAACTGGTTGCAGGATACATTCAGATACGTCAGCTTCTTGTaGTTGGTTAGAAGGCCAGCAAGGACTTCACAATCAATGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VSNWLQDTFRYVSFL*LVRRPARTSQSMGE Trigger: CTCACCCATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CCTGTGTCTAACTGGTTGCAGGATACATTCAGATACGTCAGCTTCTaGTTGTTGGTTAGAAGGCCAGCAAGGACTTCACAATCAATGGGT | + |
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Preference number: 6 (lower is better) Translates to: PVSNWLQDTFRYVSF*LLVRRPARTSQSMG Trigger: ACCCATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTTAGACACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS TCA 72 bp | AGAAACAGCAGAAATACACTAACCTATCACTCTCGTTaGATCCCCGGGGCTGGTAGATTTCTGAGATCGTCA | + |
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Preference number: 6 (lower is better) Translates to: RNSRNTLTYHSR*IPGAGRFLRSS Trigger: TGACGATCTCAGAAATCTACCAGCCCCGGGGATTCAACGAGAGTGATAGGTTAGTGTATTTCTGCTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS GCA 72 bp | GACACAACAGCTGCACACCCACATCTCCGATTTCATTaGACCCAATTTGCAGAATCTTCAGGTTTTGATTGC | + |
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Preference number: 6 (lower is better) Translates to: DTTAAHPHLRFH*TQFAESSGFDC Trigger: GCAATCAAAACCTGAAGATTCTGCAAATTGGGTGCAATGAAATCGGAGATGTGGGTGTGCAGCTGTTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CCA 72 bp | CCTTATAAACACAGGGCGTTCATCTACCCCACTAACTaGAGAGAAGGAAAACGCTGGGTAAATAGAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PYKHRAFIYPTN*REGKRWVNRME Trigger: CTCCATTCTATTTACCCAGCGTTTTCCTTCTCTCCAGTTAGTGGGGTAGATGAACGCCCTGTGTTTATAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301295.11 |
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| CDS CAA 72 bp | CTGCACACCCACATCTCCGATTTCATTGCACCCAATTaGCAGAATCTTCAGGTTTTGATTGCTGATGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LHTHISDFIAPN*QNLQVLIADES Trigger: GCTCTCATCAGCAATCAAAACCTGAAGATTCTGCAAATTGGGTGCAATGAAATCGGAGATGTGGGTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000301295.11 ENST00000587891.5 ENST00000589437.1 |
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| CDS CCA 72 bp | TGCAGGATACATTCAGATACGTCAGCTTCTTGTTGTTaGTTAGAAGGCCAGCAAGGACTTCACAATCAATGG | + |
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Preference number: 6 (lower is better) Translates to: CRIHSDTSASCC*LEGQQGLHNQW Trigger: CCATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 72 bp | CATCAGCTTCATCAGGAGTGTCGTTTTTCCAATTCCTaGTGGTCCTTGAATGATCACTGTACGTGGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: HQLHQECRFSNS*WSLNDHCTWLF Trigger: AAACAGCCACGTACAGTGATCATTCAAGGACCACAAGGAATTGGAAAAACGACACTCCTGATGAAGCTGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 72 bp | AACTGGTTGCAGGATACATTCAGATACGTCAGCTTCTaGTTGTTGGTTAGAAGGCCAGCAAGGACTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: NWLQDTFRYVSF*LLVRRPARTSQ Trigger: TTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAACCAGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS TCA 72 bp | AGGTTATGTTCCAAGCTTGTTGTTCTTCATAGTGCTTaGTCAAGAGGTTTGCAAGTTCTTCCCGGGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: RLCSKLVVLHSA*SRGLQVLPGML Trigger: AAGCATCCCGGGAAGAACTTGCAAACCTCTTGATCAAGCACTATGAAGAACAACAAGCTTGGAACATAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587464.1 |
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| CDS CAA 72 bp | TTGCAGGATACATTCAGATACGTCAGCTTCTTGTTGTaGGTTAGAAGGCCAGCAAGGACTTCACAATCAATG | + |
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Preference number: 6 (lower is better) Translates to: LQDTFRYVSFLL*VRRPARTSQSM Trigger: CATTGATTGTGAAGTCCTTGCTGGCCTTCTAACCAACAACAAGAAGCTGACGTATCTGAATGTATCCTGCAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 72 bp | ACAAGATTGAAGGCTTCCATGGCTCTTTTCGGGTCTTaGAAGAAACAGCAGAAATACACTAACCTATCACTC | + |
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Preference number: 6 (lower is better) Translates to: TRLKASMALFGS*KKQQKYTNLSL Trigger: GAGTGATAGGTTAGTGTATTTCTGCTGTTTCTTCAAAGACCCGAAAAGAGCCATGGAAGCCTTCAATCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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| CDS CAA 90 bp | CTTTCTCTTACAAGATTGAAGGCTTCCATGGCTCTTTTCGGGTCTTaGAAGAAACAGCAGAAATACACTAACCTATCACTCTCGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LSLTRLKASMALFGS*KKQQKYTNLSLSLN Trigger: ATTCAACGAGAGTGATAGGTTAGTGTATTTCTGCTGTTTCTTCAAAGACCCGAAAAGAGCCATGGAAGCCTTCAATCTTGTAAGAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301295.11 ENST00000587891.5 |
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