Pregenerated sensors for NLRP2B (Homo sapiens)
Ensembl gene IDs: ENSG00000215174Ensembl transcript IDs: ENST00000434992.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAAACAGCCCCGTGCGGGTaGGGCGGGTCCTTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: KVIYFQPECLEGAIWMCQTAPCG*GGSFPF Trigger: GAAGGGGAAGGACCCGCCCCACCCGCACGGGGCTGT...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR GCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAAGATGTCCTAGATCAGTaGCCCAGGTGGGGCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KVIYFQPECLEGAIWMCQDVLDQ*PRWGSQ Trigger: CTGGGAGCCCCACCTGGGGCACTGATCTAGGACATC...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAACACAGTGACATTCTCTaGGAGCTTTGCCTTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KVIYFQPECLEGAIWMCQHSDIL*ELCLCC Trigger: GCAGCAAAGGCAAAGCTCCCAGAGAATGTCACTGTG...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAACAGCCCATTGCTAAGTaGTGGTGGAAAAAGACACCA | + |
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Preference number: 2 (lower is better) Translates to: KVIYFQPECLEGAIWMCQQPIAK*WWKKTP Trigger: TGGTGTCTTTTTCCACCACCACTTAGCAATGGGCTG...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAATTTCAAAGACCTGGATaGTCTCTATCTTCATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: KVIYFQPECLEGAIWMCQFQRPG*SLSSSS Trigger: ACTGGATGAAGATAGAGACCATCCAGGTCTTTGAAA...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CAA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTATAATATGGACCACTTaGAGGTCTCCAGGCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: IGRSTNSRRSLRARRPRGIIWTT*RSPGQV Trigger: AACCTGGCCTGGAGACCTCAAAGTGGTCCATATTAT...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CAA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTGAAACGCCCCAGCATTaGTTTCAGGTCTATAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IGRSTNSRRSLRARRPRGETPQH*FQVYRF Trigger: AAACCTATAGACCTGAAACAAATGCTGGGGCGTTTC...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR TCA 72 bp | CAGACAGCACAAGAGCTCCTTCGGGTTCATCATTGTTaGGTGTCCAACCTTTTCACAATTTATCTCTCATCA | + |
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Preference number: 3 (lower is better) Translates to: QTAQELLRVHHC*VSNLFTIYLSS Trigger: TGATGAGAGATAAATTGTGAAAAGGTTGGACACTCAACAATGATGAACCCGAAGGAGCTCTTGTGCTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAACCTTCGGGTTCATCATaGTTGAGTGTCCAACCTTTT | + |
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Preference number: 3 (lower is better) Translates to: KVIYFQPECLEGAIWMCQPSGSS*LSVQPF Trigger: AAAAGGTTGGACACTCAACAATGATGAACCCGAAGG...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAAACAGCAGCAAAGTTCTaGCAATTGCCTTCTATAAAG | + |
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Preference number: 3 (lower is better) Translates to: KVIYFQPECLEGAIWMCQTAAKF*QLPSIK Trigger: CTTTATAGAAGGCAATTGCAAGAACTTTGCTGCTGT...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTATTCTCTGGGAGCTTTaGCTTTGCTGCCTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGILWEL*LCCLQW Trigger: CCACTGCAGGCAGCAAAGGCAAAGCTCCCAGAGAAT...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTCTTTTTGATCTCCGGTaGCATCAGGCAGCCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGLFDLR*HQAAQS Trigger: ACTTTGGGCTGCCTGATGTCACCGGAGATCAAAAAG...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTCTTCTCTTAGGCTGGTaGCATCTTCCTCCGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGLLLGW*HLPPFL Trigger: TAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAG...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTCAGCCCATTGCTAAGTaGTGGTGGAAAAAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGQPIAK*WWKKTP Trigger: TGGTGTCTTTTTCCACCACCACTTAGCAATGGGCTG...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTCATCTATTTTCAACCTaGGTGTCTGGAGGGTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGHLFST*VSGGCN Trigger: ATTGCACCCTCCAGACACTCAGGTTGAAAATAGATG...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTATTGCTAAGTGGTGGTaGAAAAAGACACCAACCCGA | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGIAKWW*KKTPTR Trigger: TCGGGTTGGTGTCTTTTTCCACCACCACTTAGCAAT...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTCAAGACCTTACACAATaGAGGAAGCATATCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGQDLTQ*RKHIIL Trigger: CAGAATGATATGCTTCCTGCATTGTGTAAGGTCTTG...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTTTTCAAAGACCTGGATaGTCTCTATCTTCATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGFQRPG*SLSSSS Trigger: ACTGGATGAAGATAGAGACCATCCAGGTCTTTGAAA...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCCGCAGGCCACGTGGTaGCCAGCACGGCGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSAPQATW*PARRPW Trigger: CCAGGGCCGCCGTGCTGGTCACCACGTGGCCTGCGG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTGGATCCTTACTAATGTaGCACCAAGAAAGCTATTAT | + |
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Preference number: 4 (lower is better) Translates to: IGRSTNSRRSLRARRPRGGSLLM*HQESYY Trigger: ATAATAGCTTTCTTGGTGCCACATTAGTAAGGATCC...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTACAGCCCCGTGCGGGTaGGGCGGGTCCTTCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSATAPCG*GGSFPF Trigger: GAAGGGGAAGGACCCGCCCCACCCGCACGGGGCTGT...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTGATGTCCTAGATCAGTaGCCCAGGTGGGGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSADVLDQ*PRWGSQ Trigger: CTGGGAGCCCCACCTGGGGCACTGATCTAGGACATC...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCCAGCACACCATGGGTaGCGAGACAGGCTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSAPAHHG*RDRLEQ Trigger: CTGTTCCAGCCTGTCTCGGCACCCATGGTGTGCTGG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCGGATGTTGAACTCCTaGACCCCGAGCCTCGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSARMLNS*TPSLAK Trigger: CTTGGCGAGGCTCGGGGTGCAGGAGTTCAACATCCG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTTCCCCTTCTAACCTCTaGAGCTTCAGACTCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSASPSNL*SFRLMH Trigger: GTGCATGAGTCTGAAGCTGCAGAGGTTAGAAGGGGA...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTGAGCTTTGCCTTTGCTaGCTGCAGTGGCATTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSAELCLC*LQWHFL Trigger: CAGAAAATGCCACTGCAGGCAGCAAAGGCAAAGCTC...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCTAGAAAACAGCTTCTaGACGTCTCCATTGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSALENSF*TSPLSQ Trigger: CTGGGACAATGGAGACGTGCAGAAGCTGTTTTCTAG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAATGGGAGCTTTGCCTTTaGTGCCTGCAGTGGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: KVIYFQPECLEGAIWMCQWELCL*CLQWHF Trigger: AAAATGCCACTGCAGGCAGCAAAGGCAAAGCTCCCA...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAATTGCACAAGTCATCCTaGCTGAGCTGTCCCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KVIYFQPECLEGAIWMCQLHKSS*LSCPRR Trigger: TCTTCTGGGACAGCTCAGCCAGGATGACTTGTGCAA...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTTTCAACCTGAGTGTCTaGAGGGTGCAATTTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSAFNLSV*RVQFGC Trigger: ACATCCAAATTGCACCCTCCAGACACTCAGGTTGAA...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| 3UTR CAA 72 bp | ACAGACAGCACAAGAGCTCCTTCGGGTTCATCATTGTaGAGTGTCCAACCTTTTCACAATTTATCTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TDSTRAPSGSSL*SVQPFHNLSLI Trigger: GATGAGAGATAAATTGTGAAAAGGTTGGACACTCAACAATGATGAACCCGAAGGAGCTCTTGTGCTGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCTCAACTTCAGCATCTaGTTCAGACACAGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSALNFSI*FRHSDI Trigger: AATGTCACTGTGTCTGAATCAGATGCTGAAGTTGAG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCTGGTGAAATGTTTTTaGACATCACTCTCTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSALVKCF*TSLSGD Trigger: GTCTCCAGAGAGTGATGTTCAAAAACATTTCACCAG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAATTGTCTACCTATGTCTaGGGGATCTTTTGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KVIYFQPECLEGAIWMCQLSTYV*GIFCSS Trigger: TGAGCTGCAAAAGATCCCCCAGACATAGGTAGACAA...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR TCA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTATGCTTGAGGCAGATTaGAAACAGCATAATGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LASLRLVTSSSVSINSSAMLEAD*KQHNVY Trigger: GTAGACATTATGCTGTTTTCAATCTGCCTCAAGCAT...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR GCA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAATGCAAGTTTCGACAATaGTTGAGGCAGATTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: KVIYFQPECLEGAIWMCQCKFRQ*LRQIEN Trigger: GTTTTCAATCTGCCTCAAGCATTGTCGAAACTTGCA...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTTCTGGAGGGTGCAATTaGGATGTGTCAAGGTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: IGRSTNSRRSLRARRPRGSGGCN*DVSRFQ Trigger: TTGAAACCTTGACACATCCAAATTGCACCCTCCAGA...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | ATCGGCCGCTCCACCAACAGCCGGAGGTCTCTCAGGGCCCGCAGGCCACGTGGTGCTGGTGAAATGTTTTaGAACATCACTCTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IGRSTNSRRSLRARRPRGAGEMF*NITLWR Trigger: TCTCCAGAGAGTGATGTTCAAAAACATTTCACCAGC...ACCACGTGGCCTGCGGGCCCTGAGAGACCTCCGGCTGTTGGTGGAGCGGCCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCATTCTCTGGGAGCTTaGCCTTTGCTGCCTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LASLRLVTSSSVSINSSAHSLGA*PLLPAV Trigger: CACTGCAGGCAGCAAAGGCAAAGCTCCCAGAGAATG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTTGTCTGGGGGATCTTTaGCAGCTCATTTCCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LASLRLVTSSSVSINSSACLGDL*QLISQG Trigger: TCCCTGGGAAATGAGCTGCAAAAGATCCCCCAGACA...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTGAAACGCCCCAGCATTaGTTTCAGGTCTATAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LASLRLVTSSSVSINSSAETPQH*FQVYRF Trigger: AAACCTATAGACCTGAAACAAATGCTGGGGCGTTTC...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAAATAATATGGACCACTTaGAGGTCTCCAGGCCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: KVIYFQPECLEGAIWMCQIIWTT*RSPGQV Trigger: AACCTGGCCTGGAGACCTCAAAGTGGTCCATATTAT...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTTCGGGTTCATCATTGTaGAGTGTCCAACCTTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LASLRLVTSSSVSINSSASGSSL*SVQPFH Trigger: GTGAAAAGGTTGGACACTCAACAATGATGAACCCGA...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTCCTTCGGGTTCATCATaGTTGAGTGTCCAACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LASLRLVTSSSVSINSSAPSGSS*LSVQPF Trigger: AAAAGGTTGGACACTCAACAATGATGAACCCGAAGG...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAAAAGTTTCGACAATGCTaGAGGCAGATTGAAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: KVIYFQPECLEGAIWMCQKFRQC*RQIENS Trigger: GCTGTTTTCAATCTGCCTCAAGCATTGTCGAAACTT...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | TTAGCTTCTCTTAGGCTGGTGACATCTTCCTCCGTTTCTATAAACTCTAGTGCTACAGCAGCAAAGTTCTaGCAATTGCCTTCTATAAAG | + |
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Preference number: 5 (lower is better) Translates to: LASLRLVTSSSVSINSSATAAKF*QLPSIK Trigger: CTTTATAGAAGGCAATTGCAAGAACTTTGCTGCTGT...AGCACTAGAGTTTATAGAAACGGAGGAAGATGTCACCAGCCTAAGAGAAGCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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| CDS-3UTR CAA 90 bp | AAAGTCATCTATTTTCAACCTGAGTGTCTGGAGGGTGCAATTTGGATGTGTCAAGTTATCAGCAGGCAGTaGTGGGTTGTTTTCTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: KVIYFQPECLEGAIWMCQVISRQ*WVVFFY Trigger: ATAGAAGAAAACAACCCACAACTGCCTGCTGATAAC...TTGACACATCCAAATTGCACCCTCCAGACACTCAGGTTGAAAATAGATGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434992.1 |
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