RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLRP12 (Homo sapiens)

Ensembl gene IDs: ENSG00000142405

Ensembl transcript IDs: ENST00000324134.11, ENST00000345770.9, ENST00000391772.1, ENST00000391773.6, ENST00000391775.7, ENST00000492915.1

Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp GCCACCACGCCTGGCCAGCTCTGTCAAACATTAATTTaGTCCCAAGCAGAGGGACTTTTGATCTCAATCTGC +
Preference number: 3 (lower is better)
Translates to: ATTPGQLCQTLI*SQAEGLLISIC
Trigger: GCAGATTGAGATCAAAAGTCCCTCTGCTTGGGATCAAATTAATGTTTGACAGAGCTGGCCAGGCGTGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
3UTR CAA 72 bp AGCCACCACGCCTGGCCAGCTCTGTCAAACATTAATTaGATCCCAAGCAGAGGGACTTTTGATCTCAATCTG +
Preference number: 4 (lower is better)
Translates to: SHHAWPALSNIN*IPSRGTFDLNL
Trigger: CAGATTGAGATCAAAAGTCCCTCTGCTTGGGATCAAATTAATGTTTGACAGAGCTGGCCAGGCGTGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp CTCCTGCGGAGCACCTCGCGCGGTCTTCCCCGTCCGCGCTGTAGGTaGCGCCATACAAGTGCAGCACCTGGGCGCTCCTGCAGCGCTTCA +
Preference number: 5 (lower is better)
Translates to: LLRSTSRGLPRPRCR*RHTSAAPGRSCSAS
Trigger: TGAAGCGCTGCAGGAGCGCCCAGGTGCTGCACTTGTATGGCGCCACCTACAGCGCGGACGGGGAAGACCGCGCGAGGTGCTCCGCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp AACGGTCCTCTCTGGTCTGAGCTGCACCAACAGCGTGTGCGCTCCTaGGGAGCACCTCGCGCGGTCTTCCCCGTCCGCGCTGTAGGTGGC +
Preference number: 5 (lower is better)
Translates to: NGPLWSELHQQRVRS*GAPRAVFPVRAVGG
Trigger: GCCACCTACAGCGCGGACGGGGAAGACCGCGCGAGGTGCTCCGCAGGAGCGCACACGCTGTTGGTGCAGCTCAGACCAGAGAGGACCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
CDS GCA 90 bp CCAGTCCAGCATCACCTTGTGTGCCAGCATGGACTTGCCTATCCCTaGCGCGCCTTGCATGACCACGGTGCGCGGTGGCTCGGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: PVQHHLVCQHGLAYP*RALHDHGARWLGAL
Trigger: GAGCGCCCCGAGCCACCGCGCACCGTGGTCATGCAAGGCGCGGCAGGGATAGGCAAGTCCATGCTGGCACACAAGGTGATGCTGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp GCCAACCTCCAGGCCTCCTCTGGCCCGAAGTGGGTGATGAGCAGCTaGGCCATTTCCAGGGGACCGGCCTTCTCCATGCTTCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: ANLQASSGPKWVMSS*AISRGPAFSMLPQG
Trigger: CCCCTGGGGAAGCATGGAGAAGGCCGGTCCCCTGGAAATGGCCCAGCTGCTCATCACCCACTTCGGGCCAGAGGAGGCCTGGAGGTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 90 bp CGACAGAGGCCGTCCCTGCCTGCGGTTCGTAGCATGGGGGTGCCGTaGGCCCCAAAGGAGAGGACCTGGAGGCTGAGATGCTCCTATGCA +
Preference number: 5 (lower is better)
Translates to: RQRPSLPAVRSMGVP*APKERTWRLRCSYA
Trigger: TGCATAGGAGCATCTCAGCCTCCAGGTCCTCTCCTTTGGGGCTCACGGCACCCCCATGCTACGAACCGCAGGCAGGGACGGCCTCTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp CCTCGAGTTCTTCCAAGTAGGTGGACAGGCGACAGAGGCCGTCCCTaGCTGCGGTTCGTAGCATGGGGGTGCCGTGAGCCCCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: PRVLPSRWTGDRGRP*LRFVAWGCREPQRR
Trigger: TCTCCTTTGGGGCTCACGGCACCCCCATGCTACGAACCGCAGGCAGGGACGGCCTCTGTCGCCTGTCCACCTACTTGGAAGAACTCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp CCGCGCTGTAGGTGGCGCCATACAAGTGCAGCACCTGGGCGCTCCTaGAGCGCTTCAGACAGAACGAGGAGACCATGTGCTCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: PRCRWRHTSAAPGRS*SASDRTRRPCAPSW
Trigger: CCAAGATGGAGCACATGGTCTCCTCGTTCTGTCTGAAGCGCTGCAGGAGCGCCCAGGTGCTGCACTTGTATGGCGCCACCTACAGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp TCCTCGTCTGGCTCAAAGAGGGTCTCTATCTTGATGGGGCTAGCCTaGTGTCCCACGGTCCTCGCGTGTCCCCGGCCTGTGTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SSSGSKRVSILMGLA*CPTVLACPRPVSRS
Trigger: GCTTCTGGACACAGGCCGGGGACACGCGAGGACCGTGGGACACCAGGCTAGCCCCATCAAGATAGAGACCCTCTTTGAGCCAGACGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp AGGTCGTTGAAACTCAAGTCCAGCTCCCGGAGGTTGTGGTTGGCCTaGAGCACCACAGAAAGACCCTCACAGGCGGCAGAGCCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RSLKLKSSSRRLWLA*STTERPSQAAEPSR
Trigger: CCGGCTGGGCTCTGCCGCCTGTGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS TCA 90 bp AGCTCCGTGGGCCGTTTCTCCTCCCAGCAGAGGCACCAGGGTCCCTaGGGATCGTGGAAAGAAGGCTTGAGCTCATCGAAGCCGTCGATG +
Preference number: 5 (lower is better)
Translates to: SSVGRFSSQQRHQGP*GSWKEGLSSSKPSM
Trigger: CATCGACGGCTTCGATGAGCTCAAGCCTTCTTTCCACGATCCTCAGGGACCCTGGTGCCTCTGCTGGGAGGAGAAACGGCCCACGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp GCCGTGAGCCCCAAAGGAGAGGACCTGGAGGCTGAGATGCTCCTATaGACGGGACACAGGGCGACCCCAGCACACCTTCCATTGCATCAT +
Preference number: 5 (lower is better)
Translates to: AVSPKGEDLEAEMLL*TGHRATPAHLPLHH
Trigger: ATGATGCAATGGAAGGTGTGCTGGGGTCGCCCTGTGTCCCGTGCATAGGAGCATCTCAGCCTCCAGGTCCTCTCCTTTGGGGCTCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp GTTTATCCGCTCAAAGGTGCTGAGAGCCAACCTCCAGGCCTCCTCTaGCCCGAAGTGGGTGATGAGCAGCTGGGCCATTTCCAGGGGACC +
Preference number: 5 (lower is better)
Translates to: VYPLKGAESQPPGLL*PEVGDEQLGHFQGT
Trigger: GGTCCCCTGGAAATGGCCCAGCTGCTCATCACCCACTTCGGGCCAGAGGAGGCCTGGAGGTTGGCTCTCAGCACCTTTGAGCGGATAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp ATGGGGTTTGAGTGCTCCTTCACCAGCAGGAGCCGGGTGTACCGGTaGCTGAGGTTGACACATTCCCCTAGGCGCGCATTGCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: MGFECSFTSRSRVYR*LRLTHSPRRALRSS
Trigger: GGAAGACCGCAATGCGCGCCTAGGGGAATGTGTCAACCTCAGCCACCGGTACACCCGGCTCCTGCTGGTGAAGGAGCACTCAAACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 90 bp CAGGCTCAGGTCCAGCTCTCTCAGGCTCTGGTTCACACTGAGAGTTaGGGCCAGCTCGTCACAGGCAGCAGCAGTGAGGCGGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: QAQVQLSQALVHTES*GQLVTGSSSEAADL
Trigger: AAGATCTGCCGCCTCACTGCTGCTGCCTGTGACGAGCTGGCCTCAACTCTCAGTGTGAACCAGAGCCTGAGAGAGCTGGACCTGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 90 bp TGGAGAGGCGCGCTGGGCTCAGGCCAGCAGCTGAAGATGAGGTCTTaGATGCTGCATTCCGTGGCACTCTGGTTCATCTCCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: WRGALGSGQQLKMRS*MLHSVALWFISLQL
Trigger: CAACTGCAGGGAGATGAACCAGAGTGCCACGGAATGCAGCATGCAAGACCTCATCTTCAGCTGCTGGCCTGAGCCCAGCGCGCCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp AAACGCGTACTCGGTCAACAGCCTGGTCACGTCCTGGTCTGGGCCTaGCCCGCCCTCCCCCTCGTCCAGGATATAGTACATAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: KRVLGQQPGHVLVWA*PALPLVQDIVHSCK
Trigger: TTTGCAGCTATGTACTATATCCTGGACGAGGGGGAGGGCGGGGCAGGCCCAGACCAGGACGTGACCAGGCTGTTGACCGAGTACGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp CAGTCTCCCAGGTCGTTGAAACTCAAGTCCAGCTCCCGGAGGTTGTaGTTGGCCTGGAGCACCACAGAAAGACCCTCACAGGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: QSPRSLKLKSSSRRL*LAWSTTERPSQAAE
Trigger: CTCTGCCGCCTGTGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCTGGGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS CCA 90 bp CCGGCTGCCCAGGGCATTTCGGTACAGAGACAGCTCTATCAGGTTTaGATTGGTGCACAGGGCCGCTGCCAGATGTTCACTGTAGGCGTC +
Preference number: 5 (lower is better)
Translates to: PAAQGISVQRQLYQV*IGAQGRCQMFTVGV
Trigger: GACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAAATGCCCTGGGCAGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 90 bp ACCTGGGCGCTCCTGCAGCGCTTCAGACAGAACGAGGAGACCATGTaGTCCATCTTGGAGGCAATGTTGCTGACCACGATCACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TWALLQRFRQNEETM*SILEAMLLTTITWK
Trigger: CTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAAGATGGAGCACATGGTCTCCTCGTTCTGTCTGAAGCGCTGCAGGAGCGCCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp CCAGTGCATTTCCTGTCAGGTCCAACTCAACCAGATGTGGGTTGGTaGCGAGCACAGAAGCCATCTCCTGACAAGCCCCGGACTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PVHFLSGPTQPDVGW*RAQKPSPDKPRTPA
Trigger: AGCTGGAGTCCGGGGCTTGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAAATGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 90 bp ATAACCAGAGGACTCGGAGTTTGCAGCCAGGATGGCTCAGCCGCTTaGAAAGCAGTCGGACACCTGTGTCCCCTAGGGCGTTGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: ITRGLGVCSQDGSAA*KAVGHLCPLGRCWS
Trigger: TGACCAACAACGCCCTAGGGGACACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCCTCTGGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324134.11
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 90 bp ATCTTGATGTGCGGCGAGACCTTCCAGCAGAGACTCTTCTCCAGGTaGCTCCTGGTCTCCTCGTTCAGGAGTCCAAACAGGAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: ILMCGETFQQRLFSR*LLVSSFRSPNRKRL
Trigger: CAGCCGCTTCCTGTTTGGACTCCTGAACGAGGAGACCAGGAGCCACCTGGAGAAGAGTCTCTGCTGGAAGGTCTCGCCGCACATCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp CCTGCACTGGGGATGCCGCAGGCCCTCGCAAAGCAGCATCATGCCTaGGAATCCAACGCCGTTGCCACTGAGATCCATCCTTGTCAAATT +
Preference number: 5 (lower is better)
Translates to: PALGMPQALAKQHHA*ESNAVATEIHPCQI
Trigger: AATTTGACAAGGATGGATCTCAGTGGCAACGGCGTTGGATTCCCAGGCATGATGCTGCTTTGCGAGGGCCTGCGGCATCCCCAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 90 bp CCTCCAGTGCATTTCCTGTCAGGTCCAACTCAACCAGATGTGGGTTaGTGCCGAGCACAGAAGCCATCTCCTGACAAGCCCCGGACTCCA +
Preference number: 5 (lower is better)
Translates to: PPVHFLSGPTQPDVG*CRAQKPSPDKPRTP
Trigger: TGGAGTCCGGGGCTTGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAAATGCACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 90 bp AGGTCCATCCCAAATAACCAGAGGACTCGGAGTTTGCAGCCAGGATaGCTCAGCCGCTTGCAAAGCAGTCGGACACCTGTGTCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: RSIPNNQRTRSLQPG*LSRLQSSRTPVSPR
Trigger: CCTAGGGGACACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCCTCTGGTTATTTGGGATGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324134.11
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS TCA 90 bp TCTAGGCCGTGCTTCCGGAGGTCCTGCTCCTCAAATAGGATTTTCTaGTTCCAGAGCCCATCTGCCGCCAAGGAGCACAACCCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SRPCFRRSCSSNRIF*FQSPSAAKEHNPLW
Trigger: CCAGAGAGGGTTGTGCTCCTTGGCGGCAGATGGGCTCTGGAATCAGAAAATCCTATTTGAGGAGCAGGACCTCCGGAAGCACGGCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 90 bp CGTCGCTCTGAGCTTTGCTTTGGATCCACTGCAACAGGTCCATCTTaGTGTGCGGCGAGACCTTCCAGCAGAGACTCTTCTCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: RRSELCFGSTATGPS*CAARPSSRDSSPGG
Trigger: GCCACCTGGAGAAGAGTCTCTGCTGGAAGGTCTCGCCGCACATCAAGATGGACCTGTTGCAGTGGATCCAAAGCAAAGCTCAGAGCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 90 bp CTGAAGAACTCCAAGGAGCCCTGCTGCAGGGTGGAGCCGTCGCTCTaGGCTTTGCTTTGGATCCACTGCAACAGGTCCATCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: LKNSKEPCCRVEPSL*ALLWIHCNRSILMC
Trigger: GCACATCAAGATGGACCTGTTGCAGTGGATCCAAAGCAAAGCTCAGAGCGACGGCTCCACCCTGCAGCAGGGCTCCTTGGAGTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp GTACAGAGACAGCTCTATCAGGTTTGGATTGGTGCACAGGGCCGCTaGCAGATGTTCACTGTAGGCGTCCAGCAGAACGGTCCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VQRQLYQVWIGAQGR*QMFTVGVQQNGPLW
Trigger: CCAGAGAGGACCGTTCTGCTGGACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 90 bp TGCCCAGGGCATTTCGGTACAGAGACAGCTCTATCAGGTTTGGATTaGTGCACAGGGCCGCTGCCAGATGTTCACTGTAGGCGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CPGHFGTETALSGLD*CTGPLPDVHCRRPA
Trigger: TGCTGGACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAAATGCCCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS TCA 90 bp CAAATTCTTATTGGCTATGAGAGCTGCAGAGAGGTCCTCGCAGGCTaGGCTGGAGATGCGGCACCTCTTCAGCCACAACCTCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: QILIGYESCREVLAG*AGDAAPLQPQPLPP
Trigger: AGGAGGCAGAGGTTGTGGCTGAAGAGGTGCCGCATCTCCAGCTCAGCCTGCGAGGACCTCTCTGCAGCTCTCATAGCCAATAAGAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS GCA 90 bp CCAGGGCATTTCGGTACAGAGACAGCTCTATCAGGTTTGGATTGGTaGACAGGGCCGCTGCCAGATGTTCACTGTAGGCGTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: PGHFGTETALSGLDW*TGPLPDVHCRRPAE
Trigger: TTCTGCTGGACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAAATGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 90 bp TGCTCCATCTTGGAGGCAATGTTGCTGACCACGATCACCTGGAAGTaGCTCAGGGCCTGCTGGATAAACTCCTCCTCCTGGATCTCGTAC +
Preference number: 5 (lower is better)
Translates to: CSILEAMLLTTITWK*LRACWINSSSWISY
Trigger: GTACGAGATCCAGGAGGAGGAGTTTATCCAGCAGGCCCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAAGATGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp ACCATGTGCTCCATCTTGGAGGCAATGTTGCTGACCACGATCACCTaGAAGTGGCTCAGGGCCTGCTGGATAAACTCCTCCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: TMCSILEAMLLTTIT*KWLRACWINSSSWI
Trigger: GATCCAGGAGGAGGAGTTTATCCAGCAGGCCCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAAGATGGAGCACATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp CAAATCCTCCAGTGCATTTCCTGTCAGGTCCAACTCAACCAGATGTaGGTTGGTGCCGAGCACAGAAGCCATCTCCTGACAAGCCCCGGA +
Preference number: 5 (lower is better)
Translates to: QILQCISCQVQLNQM*VGAEHRSHLLTSPG
Trigger: TCCGGGGCTTGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAAATGCACTGGAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 90 bp CCAGATGTTCACTGTAGGCGTCCAGCAGAACGGTCCTCTCTGGTCTaGTTGAAGGAAAGACAGGCCACTCTCTGGTGTTACTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PDVHCRRPAERSSLV*LKERQATLWCYWCL
Trigger: CAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGAGGACCGTTCTGCTGGACGCCTACAGTGAACATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 90 bp TCTTTTCTTGGAGTGACAAGAGAGACTTCCAGAAGGCATGTTGACTaGTTCCCAAGTGAGGACGGGCCACCAGGTGGGGTATCCCTCACC +
Preference number: 5 (lower is better)
Translates to: SFLGVTRETSRRHVD*FPSEDGPPGGVSLT
Trigger: GGTGAGGGATACCCCACCTGGTGGCCCGTCCTCACTTGGGAACCAGTCAACATGCCTTCTGGAAGTCTCTCTTGTCACTCCAAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 90 bp TTCAGCCACAAAGTCCGTAGTCTGCAGACTGGGTGCCTCAGTCCCTaGCATAGTAACCTCAGGCCCAAATCCTCCAGTGCATTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: FSHKVRSLQTGCLSP*HSNLRPKSSSAFPV
Trigger: GACAGGAAATGCACTGGAGGATTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 90 bp AACCACCACAAAGTCCGTAGTCTGCAGACTGGGTGCCTCAGTCCCTaGCATAGTAACCTCAGGCCCAAATCCTCCAGTGCATTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: NHHKVRSLQTGCLSP*HSNLRPKSSSAFPV
Trigger: GACAGGAAATGCACTGGAGGATTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391772.1
CDS GCA 90 bp TCCATCCCAAATAACCACCACAAAGTCCGTAGTCTGCAGACTGGGTaGCTCAGTCCCTGGCATAGTAACCTCAGGCCCAAATCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SIPNNHHKVRSLQTG*LSPWHSNLRPKSSS
Trigger: ACTGGAGGATTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGTGGTTATTTGGGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391772.1
CDS CCA 90 bp GAACGGTCCTCTCTGGTCTGCTTGAAGGAAAGACAGGCCACTCTCTaGTGTTACTGGTGCTTGACAACTATGGCCTTTGCATGTCATTTC +
Preference number: 5 (lower is better)
Translates to: ERSSLVCLKERQATL*CYWCLTTMAFACHF
Trigger: GAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGAGGACCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS TCA 90 bp CTTGCATGCTGCATTCCGTGGCACTCTGGTTCATCTCCCTGCAGTTaGTGTAGAAGAGATAATCAAATCTGCCTTGGAAGAGCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: LACCIPWHSGSSPCS*CRRDNQICLGRASR
Trigger: ACGGGAAGCTCTTCCAAGGCAGATTTGATTATCTCTTCTACATCAACTGCAGGGAGATGAACCAGAGTGCCACGGAATGCAGCATGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 90 bp CTGGTCTGCTTGAAGGAAAGACAGGCCACTCTCTGGTGTTACTGGTaGTTGACAACTATGGCCTTTGCATGTCATTTCACCGTTTATGAA +
Preference number: 5 (lower is better)
Translates to: LVCLKERQATLWCYW*LTTMAFACHFTVYE
Trigger: TTCATAAACGGTGAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 90 bp TATCTGTCTCCGTTCTCATTAGGATGCGTGCTCTCTTGGGACCATTaGCTTATTCACACAGTCTTCTGTCTACAGAAGATTGTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: YLSPFSLGCVLSWDH*LIHTVFCLQKIVGS
Trigger: GGACCCAACAATCTTCTGTAGACAGAAGACTGTGTGAATAAGCCAATGGTCCCAAGAGAGCACGCATCCTAATGAGAACGGAGACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 90 bp TCTCTGGTCTGCTTGAAGGAAAGACAGGCCACTCTCTGGTGTTACTaGTGCTTGACAACTATGGCCTTTGCATGTCATTTCACCGTTTAT +
Preference number: 5 (lower is better)
Translates to: SLVCLKERQATLWCY*CLTTMAFACHFTVY
Trigger: ATAAACGGTGAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 90 bp CCAGGCTGCACCTGGCTCTATCTGACGCTCCTAATCATTGATAGTTaGTTTACTTGTTTCCCTCTTTATTATCTGTCTCCGTTCTCATTA +
Preference number: 5 (lower is better)
Translates to: PGCTWLYLTLLIIDS*FTCFPLYYLSPFSL
Trigger: TAATGAGAACGGAGACAGATAATAAAGAGGGAAACAAGTAAACCAACTATCAATGATTAGGAGCGTCAGATAGAGCCAGGTGCAGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS GCA 72 bp CTCTGGTCTGAGCTGCACCAACAGCGTGTGCGCTCCTaGGGAGCACCTCGCGCGGTCTTCCCCGTCCGCGCT +
Preference number: 6 (lower is better)
Translates to: LWSELHQQRVRS*GAPRAVFPVRA
Trigger: AGCGCGGACGGGGAAGACCGCGCGAGGTGCTCCGCAGGAGCGCACACGCTGTTGGTGCAGCTCAGACCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
CDS CCA 72 bp AGCACCTCGCGCGGTCTTCCCCGTCCGCGCTGTAGGTaGCGCCATACAAGTGCAGCACCTGGGCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: STSRGLPRPRCR*RHTSAAPGRSC
Trigger: GCAGGAGCGCCCAGGTGCTGCACTTGTATGGCGCCACCTACAGCGCGGACGGGGAAGACCGCGCGAGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp GTGTGCCAGCATGGACTTGCCTATCCCTGCCGCGCCTaGCATGACCACGGTGCGCGGTGGCTCGGGGCGCTC +
Preference number: 6 (lower is better)
Translates to: VCQHGLAYPCRA*HDHGARWLGAL
Trigger: GAGCGCCCCGAGCCACCGCGCACCGTGGTCATGCAAGGCGCGGCAGGGATAGGCAAGTCCATGCTGGCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp ACGGTCCTCTCTGGTCTGAGCTGCACCAACAGCGTGTaGGCTCCTGCGGAGCACCTCGCGCGGTCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: TVLSGLSCTNSV*APAEHLARSSP
Trigger: CGGGGAAGACCGCGCGAGGTGCTCCGCAGGAGCGCACACGCTGTTGGTGCAGCTCAGACCAGAGAGGACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
CDS CCA 72 bp GGCGACAGAGGCCGTCCCTGCCTGCGGTTCGTAGCATaGGGGTGCCGTGAGCCCCAAAGGAGAGGACCTGGA +
Preference number: 6 (lower is better)
Translates to: GDRGRPCLRFVA*GCREPQRRGPG
Trigger: TCCAGGTCCTCTCCTTTGGGGCTCACGGCACCCCCATGCTACGAACCGCAGGCAGGGACGGCCTCTGTCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 72 bp GGGTGCCGTGAGCCCCAAAGGAGAGGACCTGGAGGCTaGGATGCTCCTATGCACGGGACACAGGGCGACCCC +
Preference number: 6 (lower is better)
Translates to: GCREPQRRGPGG*DAPMHGTQGDP
Trigger: GGGGTCGCCCTGTGTCCCGTGCATAGGAGCATCTCAGCCTCCAGGTCCTCTCCTTTGGGGCTCACGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 72 bp CCGTCCCTGCCTGCGGTTCGTAGCATGGGGGTGCCGTaGGCCCCAAAGGAGAGGACCTGGAGGCTGAGATGC +
Preference number: 6 (lower is better)
Translates to: PSLPAVRSMGVP*APKERTWRLRC
Trigger: GCATCTCAGCCTCCAGGTCCTCTCCTTTGGGGCTCACGGCACCCCCATGCTACGAACCGCAGGCAGGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp CTTCCAAGTAGGTGGACAGGCGACAGAGGCCGTCCCTaGCTGCGGTTCGTAGCATGGGGGTGCCGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: LPSRWTGDRGRP*LRFVAWGCREP
Trigger: GGGCTCACGGCACCCCCATGCTACGAACCGCAGGCAGGGACGGCCTCTGTCGCCTGTCCACCTACTTGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp AGAACGGTCCTCTCTGGTAGCTGCACCAACAGCGTGTaGGCTCCTGCGGAGCACCTCGCGCGGTCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: RTVLSGSCTNSV*APAEHLARSSP
Trigger: CGGGGAAGACCGCGCGAGGTGCTCCGCAGGAGCGCACACGCTGTTGGTGCAGCTACCAGAGAGGACCGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324134.11
ENST00000391775.7
CDS GCA 72 bp ACGGTCCTCGCGTGTCCCCGGCCTGTGTCCAGAAGCTaGTGCTGGACCTGCATGGGGTTTGAGTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TVLACPRPVSRS*CWTCMGFECSF
Trigger: GAAGGAGCACTCAAACCCCATGCAGGTCCAGCAGCAGCTTCTGGACACAGGCCGGGGACACGCGAGGACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp CATCACCTTGTGTGCCAGCATGGACTTGCCTATCCCTaGCGCGCCTTGCATGACCACGGTGCGCGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: HHLVCQHGLAYP*RALHDHGARWL
Trigger: GAGCCACCGCGCACCGTGGTCATGCAAGGCGCGGCAGGGATAGGCAAGTCCATGCTGGCACACAAGGTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp GAGCTGCAGAGAGGTCCTCGCAGGCTGAGCTGGAGATaGGGCACCTCTTCAGCCACAACCTCTGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ELQRGPRRLSWR*GTSSATTSASW
Trigger: CCAGGAGGCAGAGGTTGTGGCTGAAGAGGTGCCGCATCTCCAGCTCAGCCTGCGAGGACCTCTCTGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 72 bp CAGGCCTCCTCTGGCCCGAAGTGGGTGATGAGCAGCTaGGCCATTTCCAGGGGACCGGCCTTCTCCATGCTT +
Preference number: 6 (lower is better)
Translates to: QASSGPKWVMSS*AISRGPAFSML
Trigger: AAGCATGGAGAAGGCCGGTCCCCTGGAAATGGCCCAGCTGCTCATCACCCACTTCGGGCCAGAGGAGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp GGCTCAAAGAGGGTCTCTATCTTGATGGGGCTAGCCTaGTGTCCCACGGTCCTCGCGTGTCCCCGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: GSKRVSILMGLA*CPTVLACPRPV
Trigger: CACAGGCCGGGGACACGCGAGGACCGTGGGACACCAGGCTAGCCCCATCAAGATAGAGACCCTCTTTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp AGCTCCTTTCAGAAAACGCGTACTCGGTCAACAGCCTaGTCACGTCCTGGTCTGGGCCTGCCCCGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: SSFQKTRTRSTA*SRPGLGLPRPP
Trigger: GGGAGGGCGGGGCAGGCCCAGACCAGGACGTGACCAGGCTGTTGACCGAGTACGCGTTTTCTGAAAGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp GGGCGCTCCTCGTCTGGCTCAAAGAGGGTCTCTATCTaGATGGGGCTAGCCTGGTGTCCCACGGTCCTCGCG +
Preference number: 6 (lower is better)
Translates to: GRSSSGSKRVSI*MGLAWCPTVLA
Trigger: CGCGAGGACCGTGGGACACCAGGCTAGCCCCATCAAGATAGAGACCCTCTTTGAGCCAGACGAGGAGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp CCCAAAGGAGAGGACCTGGAGGCTGAGATGCTCCTATaGACGGGACACAGGGCGACCCCAGCACACCTTCCA +
Preference number: 6 (lower is better)
Translates to: PKGEDLEAEMLL*TGHRATPAHLP
Trigger: TGGAAGGTGTGCTGGGGTCGCCCTGTGTCCCGTGCATAGGAGCATCTCAGCCTCCAGGTCCTCTCCTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp TCCAGAAGCTGCTGCTGGACCTGCATGGGGTTTGAGTaGTCCTTCACCAGCAGGAGCCGGGTGTACCGGTGG +
Preference number: 6 (lower is better)
Translates to: SRSCCWTCMGFE*SFTSRSRVYRW
Trigger: CCACCGGTACACCCGGCTCCTGCTGGTGAAGGAGCACTCAAACCCCATGCAGGTCCAGCAGCAGCTTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp GGACTCGGAGTTTGCAGCCAGGATGGCTCAGCCGCTTaGAAAGCAGTCGGACACCTGTGTCCCCTAGGGCGT +
Preference number: 6 (lower is better)
Translates to: GLGVCSQDGSAA*KAVGHLCPLGR
Trigger: ACGCCCTAGGGGACACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324134.11
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 90 bp TCTCCCAGGTCGTTGAAACTCAAGTCCAGCTCCCGGAGGTTGTGGTaGGCCTGGAGCACCACAGAAAGACCCTCACAGGCGGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: SPRSLKLKSSSRRLW*AWSTTERPSQAAEP
Trigger: GGGCTCTGCCGCCTGTGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS CAA 90 bp CCCCAGTCTCCCAGGTCGTTGAAACTCAAGTCCAGCTCCCGGAGGTaGTGGTTGGCCTGGAGCACCACAGAAAGACCCTCACAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: PQSPRSLKLKSSSRR*WLAWSTTERPSQAA
Trigger: TGCCGCCTGTGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCTGGGAGACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS TCA 72 bp GTCCAGCTCTCTCAGGCTCTGGTTCACACTGAGAGTTaGGGCCAGCTCGTCACAGGCAGCAGCAGTGAGGCG +
Preference number: 6 (lower is better)
Translates to: VQLSQALVHTES*GQLVTGSSSEA
Trigger: CGCCTCACTGCTGCTGCCTGTGACGAGCTGGCCTCAACTCTCAGTGTGAACCAGAGCCTGAGAGAGCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 72 bp AGGTGGCGCCATACAAGTGCAGCACCTGGGCGCTCCTaGAGCGCTTCAGACAGAACGAGGAGACCATGTGCT +
Preference number: 6 (lower is better)
Translates to: RWRHTSAAPGRS*SASDRTRRPCA
Trigger: AGCACATGGTCTCCTCGTTCTGTCTGAAGCGCTGCAGGAGCGCCCAGGTGCTGCACTTGTATGGCGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp CTCAAAGGTGCTGAGAGCCAACCTCCAGGCCTCCTCTaGCCCGAAGTGGGTGATGAGCAGCTGGGCCATTTC +
Preference number: 6 (lower is better)
Translates to: LKGAESQPPGLL*PEVGDEQLGHF
Trigger: GAAATGGCCCAGCTGCTCATCACCCACTTCGGGCCAGAGGAGGCCTGGAGGTTGGCTCTCAGCACCTTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp GGGATGCCGCAGGCCCTCGCAAAGCAGCATCATGCCTaGGAATCCAACGCCGTTGCCACTGAGATCCATCCT +
Preference number: 6 (lower is better)
Translates to: GMPQALAKQHHA*ESNAVATEIHP
Trigger: AGGATGGATCTCAGTGGCAACGGCGTTGGATTCCCAGGCATGATGCTGCTTTGCGAGGGCCTGCGGCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 90 bp CTGGAGAGGCGCGCTGGGCTCAGGCCAGCAGCTGAAGATGAGGTCTaGCATGCTGCATTCCGTGGCACTCTGGTTCATCTCCCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: LERRAGLRPAAEDEV*HAAFRGTLVHLPAV
Trigger: AACTGCAGGGAGATGAACCAGAGTGCCACGGAATGCAGCATGCAAGACCTCATCTTCAGCTGCTGGCCTGAGCCCAGCGCGCCTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 72 bp CCCACAGGTCCTTCCTGTTTATCCGCTCAAAGGTGCTaGGAGCCAACCTCCAGGCCTCCTCTGGCCCGAAGT +
Preference number: 6 (lower is better)
Translates to: PTGPSCLSAQRC*EPTSRPPLARS
Trigger: ACTTCGGGCCAGAGGAGGCCTGGAGGTTGGCTCTCAGCACCTTTGAGCGGATAAACAGGAAGGACCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS TCA 72 bp TCCAAGGAGCCCTGCTGCAGGGTGGAGCCGTCGCTCTaGGCTTTGCTTTGGATCCACTGCAACAGGTCCATC +
Preference number: 6 (lower is better)
Translates to: SKEPCCRVEPSL*ALLWIHCNRSI
Trigger: GATGGACCTGTTGCAGTGGATCCAAAGCAAAGCTCAGAGCGACGGCTCCACCCTGCAGCAGGGCTCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp GAGCTGCAGAGAGGTCCTCGCAGGCTGAGCTGGAGATaGGGCACCTCTTCAGCCTCAGGTTCTGAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: ELQRGPRRLSWR*GTSSASGSEVC
Trigger: GCAAACTTCAGAACCTGAGGCTGAAGAGGTGCCGCATCTCCAGCTCAGCCTGCGAGGACCTCTCTGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp CCAGCTGACACTTCCTCAACTGAATCATCTGCAGCCTaGACTGGGGATGCCGCAGGCCCTCGCAAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PADTSSTESSAA*TGDAAGPRKAA
Trigger: TGCTGCTTTGCGAGGGCCTGCGGCATCCCCAGTGCAGGCTGCAGATGATTCAGTTGAGGAAGTGTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp TCTTCAGTTCCACAGCCTCGAGTTCTTCCAAGTAGGTaGACAGGCGACAGAGGCCGTCCCTGCCTGCGGTTC +
Preference number: 6 (lower is better)
Translates to: SSVPQPRVLPSR*TGDRGRPCLRF
Trigger: GAACCGCAGGCAGGGACGGCCTCTGTCGCCTGTCCACCTACTTGGAAGAACTCGAGGCTGTGGAACTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp CGGTGGCTGAGGTTGACACATTCCCCTAGGCGCGCATaGCGGTCTTCCATGAGCCGGAATTTCCTGCGGACA +
Preference number: 6 (lower is better)
Translates to: RWLRLTHSPRRA*RSSMSRNFLRT
Trigger: TGTCCGCAGGAAATTCCGGCTCATGGAAGACCGCAATGCGCGCCTAGGGGAATGTGTCAACCTCAGCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp CGCGCTGGGCTCAGGCCAGCAGCTGAAGATGAGGTCTaGCATGCTGCATTCCGTGGCACTCTGGTTCATCTC +
Preference number: 6 (lower is better)
Translates to: RAGLRPAAEDEV*HAAFRGTLVHL
Trigger: GAGATGAACCAGAGTGCCACGGAATGCAGCATGCAAGACCTCATCTTCAGCTGCTGGCCTGAGCCCAGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 90 bp CAAGGAGCCCTGCTGCAGGGTGGAGCCGTCGCTCTGAGCTTTGCTTaGGATCCACTGCAACAGGTCCATCTTGATGTGCGGCGAGACCTT +
Preference number: 6 (lower is better)
Translates to: QGALLQGGAVALSFA*DPLQQVHLDVRRDL
Trigger: AAGGTCTCGCCGCACATCAAGATGGACCTGTTGCAGTGGATCCAAAGCAAAGCTCAGAGCGACGGCTCCACCCTGCAGCAGGGCTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 90 bp CCCGGCTGCCCAGGGCATTTCGGTACAGAGACAGCTCTATCAGGTTaGGATTGGTGCACAGGGCCGCTGCCAGATGTTCACTGTAGGCGT +
Preference number: 6 (lower is better)
Translates to: PGCPGHFGTETALSG*DWCTGPLPDVHCRR
Trigger: ACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAAATGCCCTGGGCAGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 90 bp AATAACCAGAGGACTCGGAGTTTGCAGCCAGGATGGCTCAGCCGCTaGCAAAGCAGTCGGACACCTGTGTCCCCTAGGGCGTTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: NNQRTRSLQPGWLSR*QSSRTPVSPRALLV
Trigger: GACCAACAACGCCCTAGGGGACACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCCTCTGGTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324134.11
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS TCA 72 bp ATTGGCTATGAGAGCTGCAGAGAGGTCCTCGCAGGCTaGGCTGGAGATGCGGCACCTCTTCAGCCACAACCT +
Preference number: 6 (lower is better)
Translates to: IGYESCREVLAG*AGDAAPLQPQP
Trigger: AGGTTGTGGCTGAAGAGGTGCCGCATCTCCAGCTCAGCCTGCGAGGACCTCTCTGCAGCTCTCATAGCCAAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS GCA 72 bp TTCCTGTCAGGTCCAACTCAACCAGATGTGGGTTGGTaGCGAGCACAGAAGCCATCTCCTGACAAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: FLSGPTQPDVGW*RAQKPSPDKPR
Trigger: CCGGGGCTTGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 72 bp GGTCCATCCCAAATAACCACCACAGTTTCTGGAGTCTaGAGGCGGGATGTTGCAGCCCCTCAGCCAGCAACC +
Preference number: 6 (lower is better)
Translates to: GPSQITTTVSGV*RRDVAAPQPAT
Trigger: GGTTGCTGGCTGAGGGGCTGCAACATCCCGCCTGCAGACTCCAGAAACTGTGGTGGTTATTTGGGATGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345770.9
CDS CCA 72 bp AGACCTTCCAGCAGAGACTCTTCTCCAGGTGGCTCCTaGTCTCCTCGTTCAGGAGTCCAAACAGGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: RPSSRDSSPGGS*SPRSGVQTGSG
Trigger: GCCGCTTCCTGTTTGGACTCCTGAACGAGGAGACCAGGAGCCACCTGGAGAAGAGTCTCTGCTGGAAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp CTGCTGCAGGGTGGAGCCGTCGCTCTGAGCTTTGCTTaGGATCCACTGCAACAGGTCCATCTTGATGTGCGG +
Preference number: 6 (lower is better)
Translates to: LLQGGAVALSFA*DPLQQVHLDVR
Trigger: CCGCACATCAAGATGGACCTGTTGCAGTGGATCCAAAGCAAAGCTCAGAGCGACGGCTCCACCCTGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp TCGTTGAAACTCAAGTCCAGCTCCCGGAGGTTGTGGTaGGCCTGGAGCACCACAGAAAGACCCTCACAGGCG +
Preference number: 6 (lower is better)
Translates to: SLKLKSSSRRLW*AWSTTERPSQA
Trigger: CGCCTGTGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS CAA 72 bp CCCAGGTCGTTGAAACTCAAGTCCAGCTCCCGGAGGTaGTGGTTGGCCTGGAGCACCACAGAAAGACCCTCA +
Preference number: 6 (lower is better)
Translates to: PRSLKLKSSSRR*WLAWSTTERPS
Trigger: TGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS CAA 90 bp CTCCTGCAGCGCTTCAGACAGAACGAGGAGACCATGTGCTCCATCTaGGAGGCAATGTTGCTGACCACGATCACCTGGAAGTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LLQRFRQNEETMCSI*EAMLLTTITWKWLR
Trigger: CCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAAGATGGAGCACATGGTCTCCTCGTTCTGTCTGAAGCGCTGCAGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp GGGTTGCATCAGACTCAGCAGGTAGAGCATGTACACTaGAGTGGTGGTCCTGGACGTCTGTCTCAACAGCCC +
Preference number: 6 (lower is better)
Translates to: GLHQTQQVEHVH*SGGPGRLSQQP
Trigger: GGGCTGTTGAGACAGACGTCCAGGACCACCACTGCAGTGTACATGCTCTACCTGCTGAGTCTGATGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp CAGCTCTATCAGGTTTGGATTGGTGCACAGGGCCGCTaGCAGATGTTCACTGTAGGCGTCCAGCAGAACGGT +
Preference number: 6 (lower is better)
Translates to: QLYQVWIGAQGR*QMFTVGVQQNG
Trigger: ACCGTTCTGCTGGACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp GGAGTGACAAGAGAGACTTCCAGAAGGCATGTTGACTaGTTCCCAAGTGAGGACGGGCCACCAGGTGGGGTA +
Preference number: 6 (lower is better)
Translates to: GVTRETSRRHVD*FPSEDGPPGGV
Trigger: TACCCCACCTGGTGGCCCGTCCTCACTTGGGAACCAGTCAACATGCCTTCTGGAAGTCTCTCTTGTCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp TTGGAGGCAATGTTGCTGACCACGATCACCTGGAAGTaGCTCAGGGCCTGCTGGATAAACTCCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LEAMLLTTITWK*LRACWINSSSW
Trigger: CCAGGAGGAGGAGTTTATCCAGCAGGCCCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp AGCTCATTCAGGCTCAGGTCCAGCTCTCTCAGGCTCTaGTTCACACTGAGAGTTGAGGCCAGCTCGTCACAG +
Preference number: 6 (lower is better)
Translates to: SSFRLRSSSLRL*FTLRVEASSSQ
Trigger: CTGTGACGAGCTGGCCTCAACTCTCAGTGTGAACCAGAGCCTGAGAGAGCTGGACCTGAGCCTGAATGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp AGGTCGTTGAAACTCAAGTCCAGCTCCCGGAGGTTGTaGTTGGCCTGGAGCACCACAGAAAGACCCTCACAG +
Preference number: 6 (lower is better)
Translates to: RSLKLKSSSRRL*LAWSTTERPSQ
Trigger: CTGTGAGGGTCTTTCTGTGGTGCTCCAGGCCAACCACAACCTCCGGGAGCTGGACTTGAGTTTCAACGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
CDS CCA 72 bp CCAAATAACCAGAGGACTCGGAGTTTGCAGCCAGGATaGCTCAGCCGCTTGCAAAGCAGTCGGACACCTGTG +
Preference number: 6 (lower is better)
Translates to: PNNQRTRSLQPG*LSRLQSSRTPV
Trigger: CACAGGTGTCCGACTGCTTTGCAAGCGGCTGAGCCATCCTGGCTGCAAACTCCGAGTCCTCTGGTTATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324134.11
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS TCA 72 bp GTAGGCGTCCAGCAGAACGGTCCTCTCTGGTCTGCTTaGAGGAAAGACAGGCCACTCTCTGGTGTTACTGGT +
Preference number: 6 (lower is better)
Translates to: VGVQQNGPLWSA*RKDRPLSGVTG
Trigger: ACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGAGGACCGTTCTGCTGGACGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS GCA 72 bp TTGAGGAAGGCAGAGACGTCTTCCCCGTCTAGGCCGTaGTTCCGGAGGTCCTGCTCCTCAAATAGGATTTTC +
Preference number: 6 (lower is better)
Translates to: LRKAETSSPSRP*FRRSCSSNRIF
Trigger: GAAAATCCTATTTGAGGAGCAGGACCTCCGGAAGCACGGCCTAGACGGGGAAGACGTCTCTGCCTTCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp CACTGTAGGCGTCCAGCAGAACGGTCCTCTCTGGTCTaGTTGAAGGAAAGACAGGCCACTCTCTGGTGTTAC +
Preference number: 6 (lower is better)
Translates to: HCRRPAERSSLV*LKERQATLWCY
Trigger: GTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGAGGACCGTTCTGCTGGACGCCTACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 72 bp TCCATCTTGGAGGCAATGTTGCTGACCACGATCACCTaGAAGTGGCTCAGGGCCTGCTGGATAAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SILEAMLLTTIT*KWLRACWINSS
Trigger: GGAGGAGTTTATCCAGCAGGCCCTGAGCCACTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CCA 72 bp CATTTCCTGTCAGGTCCAACTCAACCAGATGTGGGTTaGTGCCGAGCACAGAAGCCATCTCCTGACAAGCCC +
Preference number: 6 (lower is better)
Translates to: HFLSGPTQPDVG*CRAQKPSPDKP
Trigger: GGGCTTGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp AAAGTCCGTAGTCTGCAGACTGGGTGCCTCAGTCCCTaGCATAGTAACCTCAGGCCCAAATCCTCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: KVRSLQTGCLSP*HSNLRPKSSSA
Trigger: TGCACTGGAGGATTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 72 bp TGTAGGCGTCCAGCAGAACGGTCCTCTCTGGTCTGCTaGAAGGAAAGACAGGCCACTCTCTGGTGTTACTGG +
Preference number: 6 (lower is better)
Translates to: CRRPAERSSLVC*KERQATLWCYW
Trigger: CCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGAGGACCGTTCTGCTGGACGCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS TCA 72 bp TGCTTCCGGAGGTCCTGCTCCTCAAATAGGATTTTCTaGTTCCAGAGCCCATCTGCCGCCAAGGAGCACAAC +
Preference number: 6 (lower is better)
Translates to: CFRRSCSSNRIF*FQSPSAAKEHN
Trigger: GTTGTGCTCCTTGGCGGCAGATGGGCTCTGGAATCAGAAAATCCTATTTGAGGAGCAGGACCTCCGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp TTGCTTTGGATCCACTGCAACAGGTCCATCTTGATGTaGGGCGAGACCTTCCAGCAGAGACTCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LLWIHCNRSILM*GETFQQRLFSR
Trigger: CCTGGAGAAGAGTCTCTGCTGGAAGGTCTCGCCGCACATCAAGATGGACCTGTTGCAGTGGATCCAAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp TTCGGTACAGAGACAGCTCTATCAGGTTTGGATTGGTaGACAGGGCCGCTGCCAGATGTTCACTGTAGGCGT +
Preference number: 6 (lower is better)
Translates to: FGTETALSGLDW*TGPLPDVHCRR
Trigger: ACGCCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 72 bp ATCTTCAGCCACAAAGTCCGTAGTCTGCAGACTGGGTaGCTCAGTCCCTGGCATAGTAACCTCAGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: IFSHKVRSLQTG*LSPWHSNLRPK
Trigger: TTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGCTGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS GCA 72 bp GGTCCATCCCAAATAACCACCACAAAGTCCGTAGTCTaGAGACTGGGTGCCTCAGTCCCTGGCATAGTAACC +
Preference number: 6 (lower is better)
Translates to: GPSQITTTKSVV*RLGASVPGIVT
Trigger: GGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGTGGTTATTTGGGATGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391772.1
CDS CCA 72 bp CAGGGCATTTCGGTACAGAGACAGCTCTATCAGGTTTaGATTGGTGCACAGGGCCGCTGCCAGATGTTCACT +
Preference number: 6 (lower is better)
Translates to: QGISVQRQLYQV*IGAQGRCQMFT
Trigger: AGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAAATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp CAGTGCATTTCCTGTCAGGTCCAACTCAACCAGATGTaGGTTGGTGCCGAGCACAGAAGCCATCTCCTGACA +
Preference number: 6 (lower is better)
Translates to: QCISCQVQLNQM*VGAEHRSHLLT
Trigger: TGTCAGGAGATGGCTTCTGTGCTCGGCACCAACCCACATCTGGTTGAGTTGGACCTGACAGGAAATGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 72 bp CCTTCTCCCAGCTCTGTCGCGGTCCCCAGGTATAACTaGAACTTCTTCAGTTCCACAGCCTCGAGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PSPSSVAVPRYN*NFFSSTASSSS
Trigger: GGAAGAACTCGAGGCTGTGGAACTGAAGAAGTTCAAGTTATACCTGGGGACCGCGACAGAGCTGGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 72 bp CGCTTCAGACAGAACGAGGAGACCATGTGCTCCATCTaGGAGGCAATGTTGCTGACCACGATCACCTGGAAG +
Preference number: 6 (lower is better)
Translates to: RFRQNEETMCSI*EAMLLTTITWK
Trigger: CTTCCAGGTGATCGTGGTCAGCAACATTGCCTCCAAGATGGAGCACATGGTCTCCTCGTTCTGTCTGAAGCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 90 bp GATGTTCACTGTAGGCGTCCAGCAGAACGGTCCTCTCTGGTCTGCTaGAAGGAAAGACAGGCCACTCTCTGGTGTTACTGGTGCTTGACA +
Preference number: 6 (lower is better)
Translates to: DVHCRRPAERSSLVC*KERQATLWCYWCLT
Trigger: TGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGAGGACCGTTCTGCTGGACGCCTACAGTGAACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS TCA 72 bp GAGCTTTGCTTTGGATCCACTGCAACAGGTCCATCTTaGTGTGCGGCGAGACCTTCCAGCAGAGACTCTTCT +
Preference number: 6 (lower is better)
Translates to: ELCFGSTATGPS*CAARPSSRDSS
Trigger: AGAAGAGTCTCTGCTGGAAGGTCTCGCCGCACATCAAGATGGACCTGTTGCAGTGGATCCAAAGCAAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp AATAACCACCACAAAGTCCGTAGTCTGCAGACTGGGTaGCTCAGTCCCTGGCATAGTAACCTCAGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: NNHHKVRSLQTG*LSPWHSNLRPK
Trigger: TTTGGGCCTGAGGTTACTATGCCAGGGACTGAGGCACCCAGTCTGCAGACTACGGACTTTGTGGTGGTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391772.1
CDS GCA 72 bp TTTTTAGAGGGCCTTGCCCTGTTGTCTAGGCTGGAGTaGATGGTGAGATCATGGCTCACTGTAGGCTTGACC +
Preference number: 6 (lower is better)
Translates to: FLEGLALLSRLE*MVRSWLTVGLT
Trigger: GGTCAAGCCTACAGTGAGCCATGATCTCACCATGCACTCCAGCCTAGACAACAGGGCAAGGCCCTCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 72 bp CATTTCGGTACAGAGACAGCTCTATCAGGTTTGGATTaGTGCACAGGGCCGCTGCCAGATGTTCACTGTAGG +
Preference number: 6 (lower is better)
Translates to: HFGTETALSGLD*CTGPLPDVHCR
Trigger: CCTACAGTGAACATCTGGCAGCGGCCCTGTGCACCAATCCAAACCTGATAGAGCTGTCTCTGTACCGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 90 bp AATCCAACGCCGTTGCCACTGAGATCCATCCTTGTCAAATTCTTATaGGCTATGAGAGCTGCAGAGAGGTCCTCGCAGGCTGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: NPTPLPLRSILVKFL*AMRAAERSSQAELE
Trigger: CTCCAGCTCAGCCTGCGAGGACCTCTCTGCAGCTCTCATAGCCAATAAGAATTTGACAAGGATGGATCTCAGTGGCAACGGCGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp TCTCTGGTCTGCTTGAAGGAAAGACAGGCCACTCTCTaGTGTTACTGGTGCTTGACAACTATGGCCTTTGCA +
Preference number: 6 (lower is better)
Translates to: SLVCLKERQATL*CYWCLTTMAFA
Trigger: TGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGACCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CAA 72 bp GAAGAGAGGCTCGTTGTCCCTCACGTAATTGAAGACTaGGCCCGCCTGCTCTGCATTGTGGAAATACTTGTA +
Preference number: 6 (lower is better)
Translates to: EERLVVPHVIED*ARLLCIVEILV
Trigger: TACAAGTATTTCCACAATGCAGAGCAGGCGGGCCAAGTCTTCAATTACGTGAGGGACAACGAGCCTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 90 bp GCACATGGTGAAGAGAGGCTCGTTGTCCCTCACGTAATTGAAGACTaGGCCCGCCTGCTCTGCATTGTGGAAATACTTGTAGAAGTATTC +
Preference number: 6 (lower is better)
Translates to: AHGEERLVVPHVIED*ARLLCIVEILVEVF
Trigger: GAATACTTCTACAAGTATTTCCACAATGCAGAGCAGGCGGGCCAAGTCTTCAATTACGTGAGGGACAACGAGCCTCTCTTCACCATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS CAA 90 bp GTCTGCTTGAAGGAAAGACAGGCCACTCTCTGGTGTTACTGGTGCTaGACAACTATGGCCTTTGCATGTCATTTCACCGTTTATGAAGCA +
Preference number: 6 (lower is better)
Translates to: VCLKERQATLWCYWC*TTMAFACHFTVYEA
Trigger: TGCTTCATAAACGGTGAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS GCA 72 bp GTCCCTCACGTAATTGAAGACTTGGCCCGCCTGCTCTaGATTGTGGAAATACTTGTAGAAGTATTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: VPHVIEDLARLL*IVEILVEVFLP
Trigger: AGGAAGGAATACTTCTACAAGTATTTCCACAATGCAGAGCAGGCGGGCCAAGTCTTCAATTACGTGAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
CDS GCA 72 bp TTGAAGGAAAGACAGGCCACTCTCTGGTGTTACTGGTaGTTGACAACTATGGCCTTTGCATGTCATTTCACC +
Preference number: 6 (lower is better)
Translates to: LKERQATLWCYW*LTTMAFACHFT
Trigger: GGTGAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CCA 72 bp TGCTTGAAGGAAAGACAGGCCACTCTCTGGTGTTACTaGTGCTTGACAACTATGGCCTTTGCATGTCATTTC +
Preference number: 6 (lower is better)
Translates to: CLKERQATLWCY*CLTTMAFACHF
Trigger: GAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTTCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CAA 72 bp ATAGGACCATTCAGCAGCCAATGTCCAAATAAGGTTTaGTTACTCGAAGCGCTGCCAACCTACTGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: IGPFSSQCPNKV*LLEALPTYCGS
Trigger: TGACCCACAGTAGGTTGGCAGCGCTTCGAGTAACAAAACCTTATTTGGACATTGGCTGCTGAATGGTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CAA 72 bp AAGGAAAGACAGGCCACTCTCTGGTGTTACTGGTGCTaGACAACTATGGCCTTTGCATGTCATTTCACCGTT +
Preference number: 6 (lower is better)
Translates to: KERQATLWCYWC*TTMAFACHFTV
Trigger: AACGGTGAAATGACATGCAAAGGCCATAGTTGTCAAGCACCAGTAACACCAGAGAGTGGCCTGTCTTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CAA 90 bp AGCCAGCAGATAGGACCATTCAGCAGCCAATGTCCAAATAAGGTTTaGTTACTCGAAGCGCTGCCAACCTACTGTGGGTCATTTTATTCA +
Preference number: 6 (lower is better)
Translates to: SQQIGPFSSQCPNKV*LLEALPTYCGSFYS
Trigger: TGAATAAAATGACCCACAGTAGGTTGGCAGCGCTTCGAGTAACAAAACCTTATTTGGACATTGGCTGCTGAATGGTCCTATCTGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1
CDS CCA 72 bp CCGTTCTCATTAGGATGCGTGCTCTCTTGGGACCATTaGCTTATTCACACAGTCTTCTGTCTACAGAAGATT +
Preference number: 6 (lower is better)
Translates to: PFSLGCVLSWDH*LIHTVFCLQKI
Trigger: AATCTTCTGTAGACAGAAGACTGTGTGAATAAGCCAATGGTCCCAAGAGAGCACGCATCCTAATGAGAACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS CAA 72 bp TCCGTTCTCATTAGGATGCGTGCTCTCTTGGGACCATaGGCTTATTCACACAGTCTTCTGTCTACAGAAGAT +
Preference number: 6 (lower is better)
Translates to: SVLIRMRALLGP*AYSHSLLSTED
Trigger: ATCTTCTGTAGACAGAAGACTGTGTGAATAAGCCAATGGTCCCAAGAGAGCACGCATCCTAATGAGAACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492915.1
CDS GCA 72 bp GCCAATGTCCAAATAAGGTTTTGTTACTCGAAGCGCTaGCAACCTACTGTGGGTCATTTTATTCAGGTCCAT +
Preference number: 6 (lower is better)
Translates to: ANVQIRFCYSKR*QPTVGHFIQVH
Trigger: ATGGACCTGAATAAAATGACCCACAGTAGGTTGGCAGCGCTTCGAGTAACAAAACCTTATTTGGACATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324134.11
ENST00000345770.9
ENST00000391772.1
ENST00000391773.6
ENST00000391775.7
ENST00000492915.1