RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLRP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000091592

Ensembl transcript IDs: ENST00000262467.10, ENST00000269280.8, ENST00000345221.7, ENST00000354411.7, ENST00000544378.6, ENST00000571307.1, ENST00000571451.6, ENST00000572143.1, ENST00000572272.6, ENST00000574406.1, ENST00000574512.1, ENST00000576905.5, ENST00000577119.5, ENST00000613500.4, ENST00000617618.4, ENST00000619223.4

Found 1321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTaGGTGCCGGCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGA +
Preference number: 1 (lower is better)
Translates to: RAPRVSSSGVRQLWA*VPAGSAATGPASPG
Trigger: TCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR CCA 90 bp CCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTaGGCCTGCGTGCCGGCGGGGTCTGCAGCCACAGGTCCCGCGAGT +
Preference number: 1 (lower is better)
Translates to: PARAPRVSSSGVRQL*ACVPAGSAATGPAS
Trigger: ACTCGCGGGACCTGTGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR GCA 90 bp CCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTaGCGGCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACT +
Preference number: 1 (lower is better)
Translates to: PPESHPQECASSGPA*RRGLQPQVPRVPDT
Trigger: AGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR TCA 90 bp ACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTaGGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCG +
Preference number: 1 (lower is better)
Translates to: TGPASPGHFQDVVSW*DSSSGYQSRLLRAA
Trigger: CGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR CCA 90 bp GGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTaGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCC +
Preference number: 1 (lower is better)
Translates to: GLQPQVPRVPDTSRT*SPGETAPPGTSLDS
Trigger: GGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR CCA 90 bp AGCTCCAGATGGACATTCCCTGAGATGCTGTTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGC +
Preference number: 1 (lower is better)
Translates to: SSRWTFPEMLLGHLD*GPLWHPWHGHIMPS
Trigger: GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGGGAATGTCCATCTGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CCA 90 bp CAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATaGACATTCCCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCC +
Preference number: 1 (lower is better)
Translates to: QMRLYEVCRGLASSR*TFPEMLLGHLDWGP
Trigger: GGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGGGAATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR GCA 90 bp TCTAGGCTTGGCTGCTGTGGCCACCAGATGAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCCAGATGGACATTCCCTGAGATGCTG +
Preference number: 1 (lower is better)
Translates to: SRLGCCGHQMRLYEV*RGLASSRWTFPEML
Trigger: CAGCATCTCAGGGAATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCCACAGCAGCCAAGCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CCA 90 bp ACATTCCCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATC +
Preference number: 1 (lower is better)
Translates to: TFPEMLLGHLDWGPL*HPWHGHIMPSKGII
Trigger: GATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGGGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR GCA 90 bp TCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTaGGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: SFKDLPHLSPFLRPT*GLLRPPCHPPSPLW
Trigger: CCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR CCA 90 bp GAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTaGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCA +
Preference number: 1 (lower is better)
Translates to: EMLLGHLDWGPLWHP*HGHIMPSKGIIKVP
Trigger: TGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CCA 90 bp GCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATaGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACT +
Preference number: 1 (lower is better)
Translates to: AVRPPGLGPPVASLA*THNAQQRHHQSSIT
Trigger: AGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR GCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCAGCTCTGGGCCTGCGTaGCGGCGGGGTCTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PGQNEAILESPRTALPWTSSGPA*RRGLQP
Trigger: TGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCT...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR GCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCTCTCATCCTCAGGAGTaGGCCAGCTCTGGGCCTGCG +
Preference number: 2 (lower is better)
Translates to: PGQNEAILESPRTALPWTSHPQE*ASSGPA
Trigger: CGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGA...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACAC +
Preference number: 2 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCDWGPL*HPWHGH
Trigger: GTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGCCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGC +
Preference number: 2 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRPPSPL*LHWYCR
Trigger: GCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGG...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCC +
Preference number: 2 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGLGHLD*GPLWHP
Trigger: GGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTCTCTGGCTTCATTaGTACTGCCGCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPPLWLH*YCRRLL
Trigger: CAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGG...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACAC +
Preference number: 2 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLDWGPL*HPWHGH
Trigger: GTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCC +
Preference number: 2 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPLGHLD*GPLWHP
Trigger: GGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR GCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGGTCTGCAGGGGTCTTaGCAGCTCCAGATGGACATT +
Preference number: 2 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGGLQGS*QLQMDI
Trigger: AATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCCTCTCTGGCTTCATTaGTACTGCCGCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ASPKPISQTHLRSTQASLPLWLH*YCRRLL
Trigger: CAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR CAA 90 bp CCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTaGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAG +
Preference number: 2 (lower is better)
Translates to: PKPISQTHLRSTQAS*SSTKPSLASLVLPQ
Trigger: CTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGTGGCATCCCTGGCATaGACACATAATGCCCAGCAA +
Preference number: 2 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWVASLA*THNAQQ
Trigger: TTGCTGGGCATTATGTGTCCATGCCAGGGATGCCAC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCCCCTGTGGCATCCCTaGCATGGACACATAATGCCC +
Preference number: 2 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGPLWHP*HGHIMP
Trigger: GGGCATTATGTGTCCATGCCAGGGATGCCACAGGGG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACAC +
Preference number: 2 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLDWGPL*HPWHGH
Trigger: GTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCCCTGTGGCATCCCTaGCATGGACACATAATGCCC +
Preference number: 2 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPLWHP*HGHIMP
Trigger: GGGCATTATGTGTCCATGCCAGGGATGCCACAGGGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CAA 90 bp CCGCACGAACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTaGGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCA +
Preference number: 2 (lower is better)
Translates to: PHELLSMRNPSAPFV*GLTAPEVSRARTKP
Trigger: TGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGTTCGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR TCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCCAGATGAGGCTCTATaGGGTCTGCAGGGGTCTTGC +
Preference number: 2 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSPDEAL*GLQGSC
Trigger: GCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR TCA 90 bp TCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTGGACGTGGTCTCCTGGTaGGACAGCTCCTCCGGGTAC +
Preference number: 2 (lower is better)
Translates to: SMRNPSAPFVLGLTAPEVDVVSW*DSSSGY
Trigger: GTACCCGGAGGAGCTGTCTCACCAGGAGACCACGTC...CACTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSRLYEV*RGLASS
Trigger: GGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCT...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCAGATGGACATTCCCTaGGATGCTGTTAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPQMDIP*DAVRPP
Trigger: AGGTGGCCTAACAGCATCTCAGGGAATGTCCATCTG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFRLYEV*RGLASS
Trigger: GGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGGAAGGCAAACCAGATaGCAACTTGTTTGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWGRQTR*QLVCRE
Trigger: TTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCCCCTGTGGCATCCCTaGCATGGACACATAATGCCC +
Preference number: 2 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLPLWHP*HGHIMP
Trigger: GGGCATTATGTGTCCATGCCAGGGATGCCACAGGGG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCTTGCCAGCTCCAGATaGACATTCCCTGAGATGCTG +
Preference number: 2 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPLASSR*TFPEML
Trigger: CAGCATCTCAGGGAATGTCCATCTGGAGCTGGCAAG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTATTCCTCTTTGCGCCTaGATGGGATCCGGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFIPLCA*MGSGGL
Trigger: GAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAAT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGTGGCATCCCTGGCATaGACACATAATGCCCAGCAA +
Preference number: 2 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPVASLA*THNAQQ
Trigger: TTGCTGGGCATTATGTGTCCATGCCAGGGATGCCAC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATCCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGC +
Preference number: 2 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYPPSPL*LHWYCR
Trigger: GCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGG...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTACAGCCAGAGGCAAATaGTTCCATGTCCCTCCTATT +
Preference number: 2 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFTARGK*FHVPPI
Trigger: AATAGGAGGGACATGGAACCATTTGCCTCTGGCTGT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR GCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATTTTCTCAGACCCACCTaGGGTCTACTCAGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNFLRPT*GLLRPP
Trigger: AGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAA...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR GCA 72 bp TCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTaGCGGCGGGGTCTGCAGCCACAGGTCCCGCGAGTC +
Preference number: 3 (lower is better)
Translates to: SHPQECASSGPA*RRGLQPQVPRV
Trigger: GACTCGCGGGACCTGTGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR GCA 72 bp AGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTaGGTGCCGGCGGGGTCTGCAGCCACAGGTCCCGCG +
Preference number: 3 (lower is better)
Translates to: RVSSSGVRQLWA*VPAGSAATGPA
Trigger: CGCGGGACCTGTGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR CAA 90 bp ACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCCCCTCTCTGGCTTCATaGGTACTGCCGCAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: TPARAPRVSSSGVRQLWAPSLAS*VLPQAA
Trigger: AGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGG...GGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR CCA 72 bp CCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTaGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGT +
Preference number: 3 (lower is better)
Translates to: PQVPRVPDTSRT*SPGETAPPGTS
Trigger: ACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR TCA 72 bp GCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTaGGACAGCTCCTCCGGGTACCAGTCTCGACTCCTC +
Preference number: 3 (lower is better)
Translates to: ASPGHFQDVVSW*DSSSGYQSRLL
Trigger: GAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR CCA 72 bp GGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATaGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: GSMSLLFLFAPG*DPEGSRLGCCG
Trigger: GCCACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR TCA 72 bp CAGCCCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTaGGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCC +
Preference number: 3 (lower is better)
Translates to: QPLLSWVSQLQK*AGPERSHPRVP
Trigger: GGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR GCA 72 bp GGCTGCTGTGGCCACCAGATGAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCCAGATGGACATTCCCT +
Preference number: 3 (lower is better)
Translates to: GCCGHQMRLYEV*RGLASSRWTFP
Trigger: AGGGAATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCCACAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CCA 72 bp TTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTaGCATGGACACATAATGCCCAGCAAAGGCATCATC +
Preference number: 3 (lower is better)
Translates to: LGHLDWGPLWHP*HGHIMPSKGII
Trigger: GATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CCA 72 bp TGGACATTCCCTGAGATGCTGTTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCCTGGCATGGACACATA +
Preference number: 3 (lower is better)
Translates to: WTFPEMLLGHLD*GPLWHPWHGHI
Trigger: TATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGGGAATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCGGAGGGCTCTAGGCTaGGCTGCTGTGGCCACCAGA +
Preference number: 3 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFRRALG*AAVATR
Trigger: TCTGGTGGCCACAGCAGCCAAGCCTAGAGCCCTCCG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CAA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCCTCCTATTCCTCTTaGCGCCTGGATGGGATCCGG +
Preference number: 3 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPSYSS*RLDGIR
Trigger: CCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR GCA 72 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTaGGGTCTACTCAGGCCTCCTTGTCATCCACCAAGC +
Preference number: 3 (lower is better)
Translates to: DLPHLSPFLRPT*GLLRPPCHPPS
Trigger: GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR CCA 72 bp CCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATaGACACATAATGCCCAGCAAAGGCATCATCAAAGT +
Preference number: 3 (lower is better)
Translates to: PPGLGPPVASLA*THNAQQRHHQS
Trigger: ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CCA 72 bp CTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATaGACATTCCCTGAGATGCTGTTAGGCCACCTGGAC +
Preference number: 3 (lower is better)
Translates to: LYEVCRGLASSR*TFPEMLLGHLD
Trigger: GTCCAGGTGGCCTAACAGCATCTCAGGGAATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CAA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCAGGTCTGCAGGGGTCTaGCCAGCTCCAGATGGACAT +
Preference number: 3 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSRSAGV*PAPDGH
Trigger: ATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCT...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CAA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAACCAGATGGCAACTaGTTTGCAGAGAAAGAAACT +
Preference number: 3 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSKPDGN*FAEKET
Trigger: AGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTT...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR-3UTR CAA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAACCCTCTCTGGCTTCATaGGTACTGCCGCAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: PQKQASSLLSISHMIKNKPSLAS*VLPQAA
Trigger: AGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGG...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR-3UTR CAA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTTCTACTCAGGCCTCCTaGTCATCCACCAAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTASTQAS*SSTKPS
Trigger: AGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGA...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR CCA 72 bp AACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTaGTTCCTGGTATTAAGCCTTTTGAGTCTTAAGATG +
Preference number: 3 (lower is better)
Translates to: NRDGRWVNILPR*FLVLSLLSLKM
Trigger: CATCTTAAGACTCAAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCAGATGGCAACTTGTTaGCAGAGAAAGAAACTGAGA +
Preference number: 3 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVQMATC*QRKKLR
Trigger: TCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGCGCCAGCTCTGGGCCTaGGTGCCGGCGGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGRQLWA*VPAGSA
Trigger: TGCAGACCCCGCCGGCACGCAGGCCCAGAGCTGGCG...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGGGCTGTAGGCTGGTGTaGGCCTGTGGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRGCRLV*ACGGVP
Trigger: AGGAACGCCCCCACAGGCGCACACCAGCCTACAGCC...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGCCAGCCCCAGGCGTATaGGTTTGCAGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: APRVSSSGVRQLWACVPAPAPGV*VCRQDA
Trigger: GGCATCCTGCCTGCAAACTCATACGCCTGGGGCTGG...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGGTCCCAGGAGCCTCCTaGTCTCTGGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRVPGAS*SLGARL
Trigger: CAGCCTAGCACCCAGAGAGCAGGAGGCTCCTGGGAC...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGGGGAATGAGGGAGAGTaGCCTGCCCCTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGGNEGE*PAPSWA
Trigger: AGCCCAGGAAGGGGCAGGCCACTCTCCCTCATTCCC...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGTCCCATGGGTGGTGGTaGGGCTGTAGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGSHGWW*GCRLVC
Trigger: GCACACCAGCCTACAGCCCCACCACCACCCATGGGA...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTGCAGTCCTCAGCTGTaGGGCCACAGCCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: AGSAATGPASPGHFQDVVCSPQL*GHSQPT
Trigger: GGTTGGCTGGCTGTGGCCTCACAGCTGAGGACTGCA...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGAGCTCTGGGCCTGCGTaGCGGCGGGGTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRSSGPA*RRGLQP
Trigger: TGGCTGCAGACCCCGCCGGCACGCAGGCCCAGAGCT...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGGGTGGGGCTGTAGGCTaGTGTGCGCCTGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRGGAVG*CAPVGA
Trigger: CGCCCCCACAGGCGCACACCAGCCTACAGCCCCACC...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGCGCTGCTCCCCATACTaGGCCACCAGGTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVRCSPY*ATRYEA
Trigger: GGCCTCGTACCTGGTGGCTCAGTATGGGGAGCAGCG...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGTGCTAGGCTGGGCTaGGGTGGGGATCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHGARLG*GGDPQL
Trigger: GAGCTGGGGATCCCCACCTCAGCCCAGCCTAGCACC...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGGGTAGAGGTGGAAGGTaGCTTCCTCAGGATGGACGC +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRGRGGR*LPQDGR
Trigger: GCGTCCATCCTGAGGAAGTCACCTTCCACCTCTACC...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCGTGCCGGCGGGGTCTaGAGCCACAGGTCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGRAGGV*SHRSRE
Trigger: CTCGCGGGACCTGTGGCTGCAGACCCCGCCGGCACG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGGCCCCTTCCTGGGCTTaGGCGCACAGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEAPSWA*AHSDLS
Trigger: GCTGAGGTCACTGTGCGCCCAAGCCCAGGAAGGGGC...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGGCGGTGGAGGTGGGTTaGCTGGGAGACCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRAVEVG*LGDPRW
Trigger: CCACCTGGGGTCTCCCAGCCAACCCACCTCCACCGC...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCGCATTAGCACTGCGGTaGAGGTGGGTTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AGSAATGPASPGHFQDVVALALR*RWVGWE
Trigger: CTCCCAGCCAACCCACCTCCACCGCAGTGCTAATGC...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGCGGTCCCCATACAGCTaGCCTCTCCCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGERSPYS*PLPQAS
Trigger: GGAAGCCTGGGGGAGAGGCCAGCTGTATGGGGACCG...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGAGCTCGGTCAGGGTCTaGTTGGCTCTCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: APRVSSSGVRQLWACVPASSVRV*LALSPK
Trigger: CTTTGGGCTGAGAGCCAACCAGACCCTGACCGAGCT...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCACAGAGGCCAGGTCCTaGCAGCAGTCAGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGSAATGPASPGHFQDVVTEARS*QQSDVR
Trigger: CCTCACGTCTGACTGCTGCCAGGACCTGGCCTCTGT...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp ACAGCCCTCCCGTGGACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGAGCAGAGACCCGTGTTaGGCCAGCGGTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TALPWTPARAPRVSSSGVSRDPC*ASGRSQ
Trigger: CTGGCTCCTACCGCTGGCCCAACACGGGTCTCTGCT...CACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGTCCACGGGAGGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCAAAACCCTTCTCTCTaGGCCCTGGGTGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTQNPSL*ALGAPR
Trigger: GCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTG...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGCTGTGGTCCGAGCCGTaGTCAGGAAGGATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVLWSEP*SGRMPR
Trigger: CCGAGGCATCCTTCCTGATCACGGCTCGGACCACAG...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp ACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCCTGCCCTCAATCAGCTaGAGCTTCTTCACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TPARAPRVSSSGVRQLWALPSIS*SFFTWR
Trigger: CCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAG...GGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGCTGTAGGCTGGTGTaGGCCTGTGGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHGCRLV*ACGGVP
Trigger: AGGAACGCCCCCACAGGCGCACACCAGCCTACAGCC...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGTTCCGCTTCATCTGCTaGATCAGGCAAGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGFRFIC*IRQVQA
Trigger: GGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAA...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCGGTACTGCCGCAGGCTaGTGGGCACTAGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSAATGPASPGHFQDVVGTAAG*WALVSP
Trigger: AGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACC...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCTCTCATCCTCAGGAGTaGGCCAGCTCTGGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGSHPQE*ASSGPA
Trigger: CGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGA...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGGGAGCCCCGGGCTGCTaGCTCCCAGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEGAPGC*LPGFFR
Trigger: TCTGAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCC...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGTTGGCGAGCAGAAGCTaGAACTCCTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRLASRS*NSFSSS
Trigger: GGAGGAGCTGAAGGAGTTCCAGCTTCTGCTCGCCAA...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGGTGGGGCTGTAGGCTaGTGTGCGCCTGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHGGAVG*CAPVGA
Trigger: CGCCCCCACAGGCGCACACCAGCCTACAGCCCCACC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCCGGTCCCCATACAGCTaGCCTCTCCCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSRSPYS*PLPQAS
Trigger: GGAAGCCTGGGGGAGAGGCCAGCTGTATGGGGACCG...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCGGTCCCCATACAGCTaGCCTCTCCCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHRSPYS*PLPQAS
Trigger: GGAAGCCTGGGGGAGAGGCCAGCTGTATGGGGACCG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGTGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGECIRRL*LAPVQT
Trigger: TGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCA...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGGGTTCCACGGCTGGCTaGTGTTCCTTCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRGSTAG*CSFLVS
Trigger: TGAAACCAGGAAGGAACACCAGCCAGCCGTGGAACC...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGCCTGAGATCAACCCTTaGGCTGCAAGGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGPEINP*AARLRR
Trigger: TCTTCTCAGCCTTGCAGCTCAAGGGTTGATCTCAGG...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCAAAACCCTTCTCTCTaGGCCCTGGGTGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHQNPSL*ALGAPR
Trigger: GCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTGCAGGCAGGATGCCTaGGCCCCTCACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSCRQDA*APHRAV
Trigger: GACTGCTCTGTGAGGGGCTCAGGCATCCTGCCTGCA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCTCACAGCTCCAGAAGTaGGCCGGGCCAGAACGAAGC +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGSQLQK*AGPERS
Trigger: GCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGA...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGCCAGCTCCCCAGCACTaGTGTGGATGTGGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRPAPQH*CGCGGV
Trigger: AACGCCCCCACATCCACAGCAGTGCTGGGGAGCTGG...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCGTTCCTACCACCGCTaGCCATGGGGGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHRSYHR*PWGPAF
Trigger: AAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGAACG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGTCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: APRVSSSGVRQLWACVPASRLFC*RSSSFR
Trigger: CCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGA...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGAGGGCCCTCAGTTCCTaGCTCATCTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: APRVSSSGVRQLWACVPARALSS*LISSLR
Trigger: TCTGAGTGATGAGATGAGGCAGGAACTGAGGGCCCT...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHVQQRP*HHPAVL
Trigger: CAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGAC...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGGGGCCTGCAAGACACTaGAAGAAGTCAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGGPARH*KKSADR
Trigger: CCTATCAGCTGACTTCTTCCAGTGTCTTGCAGGCCC...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGGCCACTCGTCTTCTCTaGCTGAGCGGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEATRLL*LSGCLT
Trigger: GGTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGC...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCGCGGTGGAGGTGGGTTaGCTGGGAGACCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLAVEVG*LGDPRW
Trigger: CCACCTGGGGTCTCCCAGCCAACCCACCTCCACCGC...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTCCCCAGCACTGCTGTaGATGTGGGGGCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSSPALL*MWGRWV
Trigger: CACCCAACGCCCCCACATCCACAGCAGTGCTGGGGA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGGAGCTGGGGTCCCAATaGCTGAGCTTGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEELGSQ*LSLESL
Trigger: CAGGCTCTCCAAGCTCAGCCATTGGGACCCCAGCTC...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGGGACTCCAGAGAGTGTaGCTGCAGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVGLQRV*LQQQLQ
Trigger: CTGCAGCTGCTGCTGCAGCCACACTCTCTGGAGTCC...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGGGCTGTCTCAGTCTCTaGCAAAGGTGTTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRGCLSL*QRCLAP
Trigger: TGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCC...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGACTGCCGCAGGCTGCTaGGCACTAGTATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVTAAGC*ALVSPG
Trigger: GCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGT...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGTGGGTCCTGGACTCCTaGGATCAACCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEWVLDS*DQPLSC
Trigger: GCAGCTCAAGGGTTGATCTCAGGAGTCCAGGACCCA...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGCTCGTCTTCTCTGGCTaGGCGGGTGTCTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: NEAILESPRTALPWTPARLVFSG*AGVSPE
Trigger: TTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAG...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTTGGGCTGTAGGGGAATaGGGGAGAGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPWAVGE*GRVACP
Trigger: GGGGCAGGCCACTCTCCCTCATTCCCCTACAGCCCA...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGCGGGGCATCCAGAGGTaGAGGTACGGCTATGCGGGC +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWRGIQR*RYGYAG
Trigger: GCCCGCATAGCCGTACCTTCACCTCTGGATGCCCCG...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGAACAGTGCTGTCCTTTaGCTTGGCTCTTACCGTCTC +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGNSAVL*LGSYRL
Trigger: GAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTT...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAACAAACTGCCCAGCAGTaGATCCGCCGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQQTAQQ*IRRLWL
Trigger: CAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTG...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGTTTTCCCCAGCAAACTaGCCAGCAGTGCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEFSPAN*PAVHPP
Trigger: CGGCGGATGCACTGCTGGGCAGTTTGCTGGGGAAAA...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGGCAGTCGCTGTAGCTTaGAGCTCGGCTGTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEAVAVA*SSAVSV
Trigger: GACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGC...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGTCATCCAGGTTGTTCTaGTGCAGGTCTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRSSRLF*CRSSSF
Trigger: GAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGA...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGTGGAGTGCGCTTTATTaGCGAGCAGAAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRWSALY*RAEAGT
Trigger: AGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCA...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGCCCCTTCCTGGGCTTaGGCGCACAGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHAPSWA*AHSDLS
Trigger: GCTGAGGTCACTGTGCGCCCAAGCCCAGGAAGGGGC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCGGTGGAGGTGGGTTaGCTGGGAGACCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCAVEVG*LGDPRW
Trigger: CCACCTGGGGTCTCCCAGCCAACCCACCTCCACCGC...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ACAGCCCTCCCGTGGACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACT +
Preference number: 4 (lower is better)
Translates to: TALPWTPARAPRVSSSGVPAGNS*IQGIST
Trigger: AGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGG...CACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGTCCACGGGAGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCGCTGGTGTGCGCCTGTaGGGGCGTTCCTACCACCGC +
Preference number: 4 (lower is better)
Translates to: PFCLGSHSSRSEPGQNEAAGVRL*GRSYHR
Trigger: GCGGTGGTAGGAACGCCCCCACAGGCGCACACCAGC...GGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCCAAGACAAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCGAGACTCACCACCTTaGACTGGGCCAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHRDSPP*TGPALC
Trigger: GCAGAGAGCTGGCCCAGTCCAAGGTGGTGAGTCTCG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCCTGAGGTTCCACGGCTaGCTGGTGTTCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGLRFHG*LVFLPG
Trigger: ACCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAG...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGCCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEPPSPL*LHWYCR
Trigger: GCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGG...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATTGGGTCCTGGACTCCTaGGATCAACCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHWVLDS*DQPLSC
Trigger: GCAGCTCAAGGGTTGATCTCAGGAGTCCAGGACCCA...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTGGGCTGTAGGGGAATaGGGGAGAGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCWAVGE*GRVACP
Trigger: GGGGCAGGCCACTCTCCCTCATTCCCCTACAGCCCA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTGTGGGGGCGTTGGGTaGCTCCTGGCTTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLCGGVG*LLAWRL
Trigger: GAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGTGGGGGCGTTGGGTaGCTCCTGGCTTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGCGGVG*LLAWRL
Trigger: GAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGGGGCGTTGGGTaGCTCCTGGCTTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCCGGVG*LLAWRL
Trigger: GAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACA...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGCAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRQPPAV*LCEVLG
Trigger: CCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTG...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp ACAGCCCTCCCGTGGACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGTCCCATCTTTTCCGATaGGCTCAGCGAGACTCACCA +
Preference number: 4 (lower is better)
Translates to: TALPWTPARAPRVSSSGVSHLFR*AQRDSP
Trigger: TGGTGAGTCTCGCTGAGCTCATCGGAAAAGATGGGA...CACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGTCCACGGGAGGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGCTGTGGTCCGAGCCGTaGTCAGGAAGGATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWLWSEP*SGRMPR
Trigger: CCGAGGCATCCTTCCTGATCACGGCTCGGACCACAG...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCCTGCCCTCAATCAGCTaGAGCTTCTTCACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSLPSIS*SFFTWR
Trigger: CCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAG...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTGCAGTCCTCAGCTGTaGGGCCACAGCCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLCSPQL*GHSQPT
Trigger: GGTTGGCTGGCTGTGGCCTCACAGCTGAGGACTGCA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGCAGGCAGGATGCCTaGGCCCCTCACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCCRQDA*APHRAV
Trigger: GACTGCTCTGTGAGGGGCTCAGGCATCCTGCCTGCA...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCAGGCAGGATGCCTaGGCCCCTCACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGCRQDA*APHRAV
Trigger: GACTGCTCTGTGAGGGGCTCAGGCATCCTGCCTGCA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCCAGCCCCAGGCGTATaGGTTTGCAGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGPAPGV*VCRQDA
Trigger: GGCATCCTGCCTGCAAACTCATACGCCTGGGGCTGG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGCCAGCTCCCCAGCACTaGTGTGGATGTGGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWPAPQH*CGCGGV
Trigger: AACGCCCCCACATCCACAGCAGTGCTGGGGAGCTGG...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGTCCCAGGAGCCTCCTaGTCTCTGGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHVPGAS*SLGARL
Trigger: CAGCCTAGCACCCAGAGAGCAGGAGGCTCCTGGGAC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGTCCCAGGAGCCTCCTaGTCTCTGGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGVPGAS*SLGARL
Trigger: CAGCCTAGCACCCAGAGAGCAGGAGGCTCCTGGGAC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCGTTCCTACCACCGCTaGCCATGGGGGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCRSYHR*PWGPAF
Trigger: AAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGAACG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCCAGGCTTCCTTCACCTaGCTGGCCAGTGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGQASFT*LASVDF
Trigger: GAAGTCAACACTGGCCAGGCAGGTGAAGGAAGCCTG...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCTCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTSELGS*KTHPGS
Trigger: TGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGA...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGGCCACCATCCAGCTGTaGTGTGGGTTGATCTCACCC +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRATIQL*CGLISP
Trigger: GGGTGAGATCAACCCACAGCACAGCTGGATGGTGGC...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCVQQRP*HHPAVL
Trigger: CAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGAC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCGTGAAGGTACGGCTATaGGGGCTGGAGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSVKVRL*GLEGSE
Trigger: CTCTGATCCCTCCAGCCCGCATAGCCGTACCTTCAC...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCTGATAGGGAGGTCCTaGGATGGGGTCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSHSSRSEPGQNEAILESLIGRS*DGVQGQ
Trigger: CTGGCCCTGGACCCCATCCCAGGACCTCCCTATCAG...GGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGGGAATGAGGGAGAGTaGCCTGCCCCTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWGNEGE*PAPSWA
Trigger: AGCCCAGGAAGGGGCAGGCCACTCTCCCTCATTCCC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWLLSEP*VHPAGN
Trigger: ATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAG...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: GSHSSRSEPGQNEAILESLLSEP*VHPAGN
Trigger: ATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAG...GGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATTCCCCAGCACTGCTGTaGATGTGGGGGCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSPALL*MWGRWV
Trigger: CACCCAACGCCCCCACATCCACAGCAGTGCTGGGGA...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGGTGGGGCTGTAGGCTaGTGTGCGCCTGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPGGAVG*CAPVGA
Trigger: CGCCCCCACAGGCGCACACCAGCCTACAGCCCCACC...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCGGGGATCTTGGCTTCTaGGGTGAGGTCTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: AGSAATGPASPGHFQDVVGDLGF*GEVFVE
Trigger: TTCTACAAAGACCTCACCCCAGAAGCCAAGATCCCC...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCGAAGAGCAGCCGCTCTaGCCTAGACAGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTEEQPL*PRQDLS
Trigger: AGACAGATCCTGTCTAGGCCAGAGCGGCTGCTCTTC...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGCIRRL*LAPVQT
Trigger: TGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGAGGGGTCATCACACTTaGTTTCCGTCTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGRGHHT*FPSAED
Trigger: ATCTTCAGCAGACGGAAACCAAGTGTGATGACCCCT...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATAGCAGAGACCCGTGTTaGGCCAGCGGTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSRDPC*ASGRSQ
Trigger: CTGGCTCCTACCGCTGGCCCAACACGGGTCTCTGCT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGTGGGGTCAGCGGGGGTaGCTTGTGGATTCGCACAAA +
Preference number: 4 (lower is better)
Translates to: NEAILESPRTALPWTPARWGQRG*LVDSHK
Trigger: TTTGTGCGAATCCACAAGCCACCCCCGCTGACCCCA...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGACAGCCCATATAAAGTaGGGTCAGCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGETAHIK*GQRGWL
Trigger: AAGCCACCCCCGCTGACCCCACTTTATATGGGCTGT...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVLGHLD*GPLWHP
Trigger: GGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGTGTGGGGGCGTTGGGTaGCTCCTGGCTTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQCGGVG*LLAWRL
Trigger: GAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACA...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCTACACCATCGAGGATaGAGAGCAGCCGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGLHHRG*RAAALA
Trigger: GGCCAGAGCGGCTGCTCTTCATCCTCGATGGTGTAG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR TCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCTACACCATCGAGGATaGAGAGCAGCCGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHLHHRG*RAAALA
Trigger: GGCCAGAGCGGCTGCTCTTCATCCTCGATGGTGTAG...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGCCAGAGCTCTTTGTTTaGTTTGACCAACCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: APRVSSSGVRQLWACVPAPELFV*FDQPKG
Trigger: GCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGG...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGAGAGCAGAGGTCTCTaGGCTGGGGTCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGESRGL*AGVPMA
Trigger: AGCCATTGGGACCCCAGCTCAGAGACCTCTGCTCTC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTGCAGTCCTCAGCTGTaGGGCCACAGCCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCCSPQL*GHSQPT
Trigger: GGTTGGCTGGCTGTGGCCTCACAGCTGAGGACTGCA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCCAGCCCCAGGCGTATaGGTTTGCAGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLPAPGV*VCRQDA
Trigger: GGCATCCTGCCTGCAAACTCATACGCCTGGGGCTGG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTRVSAA*VRMCYY
Trigger: GTAATAGCACATCCTCACTCAAGCGGCAGAGACTCG...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATTTGCAGCCTGATCCCTaGTCCCAAGTGGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHLQPDP*SQVANV
Trigger: TACGTTGGCCACTTGGGATCAGGGATCAGGCTGCAA...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCGTCTCTGTTGCACCTaGGGTTCCACGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLRLCCT*GSTAGW
Trigger: CCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTAGTGGAGCCCCGGGCTaGTGGCTCCCAGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCSGAPG*WLPGFF
Trigger: GAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCCACT...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGACCTCAGCCCCATCTaGTCCCAGGTATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCDLSPI*SQVWRA
Trigger: AGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGACCTCAGCCCCATCTaGTCCCAGGTATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWDLSPI*SQVWRA
Trigger: AGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLSLSPG*TPPAIH
Trigger: ATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCCAGCTCCCCAGCACTaGTGTGGATGTGGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCPAPQH*CGCGGV
Trigger: AACGCCCCCACATCCACAGCAGTGCTGGGGAGCTGG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCCAGCTCCCCAGCACTaGTGTGGATGTGGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVPAPQH*CGCGGV
Trigger: AACGCCCCCACATCCACAGCAGTGCTGGGGAGCTGG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTGGCTGTAGGCTGGTGTaGGCCTGTGGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCGCRLV*ACGGVP
Trigger: AGGAACGCCCCCACAGGCGCACACCAGCCTACAGCC...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSSELGS*KTHPGS
Trigger: TGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCAAACTGCCCAGCAGTaGATCCGCCGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLQTAQQ*IRRLWL
Trigger: CAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGCGTGATCAGGAAGGATaGCTCGGGAAGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: PQSLILRSAPALGLRAGGRDQEG*LGKYSF
Trigger: AAAACTATACTTCCCGAGGCATCCTTCCTGATCACG...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGGAAGGAATGAGGTTCTaGAGAGCTGTGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: NEAILESPRTALPWTPAREGMRF*RAVVRA
Trigger: GGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTC...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATTTCCGCTTCATCTGCTaGATCAGGCAAGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHFRFIC*IRQVQA
Trigger: GGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAA...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGTCTGATCCGAGTCTCTaGCGCTTGAGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGESDPSL*RLSEDV
Trigger: CACATCCTCACTCAAGCGGCAGAGACTCGGATCAGA...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHSSRSEPGQNEAILESPVQQRP*HHPAVL
Trigger: CAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGAC...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTTTCAGAACCCAGAGTaGAGCCCCGGGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLFQNPE*SPGLLA
Trigger: AGCCAGCAGCCCGGGGCTCCACTCTGGGTTCTGAAA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAACCCTCTCCTGGGTCCTaGACTCCTGAGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQPSPGS*TPEINP
Trigger: AGGGTTGATCTCAGGAGTCCAGGACCCAGGAGAGGG...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGTGGTGACGGGAGATaGGGTGTGGGCAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGCGDGR*GVGNAH
Trigger: GTGAGCGTTGCCCACACCCCATCTCCCGTCACCACA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCTGATAGGGAGGTCCTaGGATGGGGTCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPLIGRS*DGVQGQ
Trigger: CTGGCCCTGGACCCCATCCCAGGACCTCCCTATCAG...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCTGATAGGGAGGTCCTaGGATGGGGTCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVLIGRS*DGVQGQ
Trigger: CTGGCCCTGGACCCCATCCCAGGACCTCCCTATCAG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGCACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: NEAILESPRTALPWTPARHPKSS*SALYWR
Trigger: TCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTG...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGCCACTCGTCTTCTCTaGCTGAGCGGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWATRLL*LSGCLT
Trigger: GGTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCATCTGCTCCCAGGTATaGAGGGCTAGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCICSQV*RARSQA
Trigger: GGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGAT...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTGGATGTGGGGGCGTTaGGTGACTCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWWMWGR*VTPGLE
Trigger: CTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGGATGTGGGGGCGTTaGGTGACTCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGWMWGR*VTPGLE
Trigger: CTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTGCACTGCTGTGGATGTaGGGGCGTTGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPALLWM*GRWVTP
Trigger: AGGAGTCACCCAACGCCCCCACATCCACAGCAGTGC...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATGCTGGTGTGCGCCTGTaGGGGCGTTCCTACCACCGC +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHAGVRL*GRSYHR
Trigger: GCGGTGGTAGGAACGCCCCCACAGGCGCACACCAGC...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGCTGGTGTGCGCCTGTaGGGGCGTTCCTACCACCGC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPAGVRL*GRSYHR
Trigger: GCGGTGGTAGGAACGCCCCCACAGGCGCACACCAGC...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGCTGGTGTGCGCCTGTaGGGGCGTTCCTACCACCGC +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLAGVRL*GRSYHR
Trigger: GCGGTGGTAGGAACGCCCCCACAGGCGCACACCAGC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGTGGGGCTGTAGGCTaGTGTGCGCCTGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSGGAVG*CAPVGA
Trigger: CGCCCCCACAGGCGCACACCAGCCTACAGCCCCACC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTTCCCATGGGTGGTGGTaGGGCTGTAGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPSHGWW*GCRLVC
Trigger: GCACACCAGCCTACAGCCCCACCACCACCCATGGGA...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCTTCCTTCACCTGCCTaGCCAGTGTTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTLPSPA*PVLTSQ
Trigger: TTGGGAAGTCAACACTGGCCAGGCAGGTGAAGGAAG...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCGGTCCCCATACAGCTaGCCTCTCCCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGRSPYS*PLPQAS
Trigger: GGAAGCCTGGGGGAGAGGCCAGCTGTATGGGGACCG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCGAGACTCACCACCTTaGACTGGGCCAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSHSSRSEPGQNEAILESRDSPP*TGPALC
Trigger: GCAGAGAGCTGGCCCAGTCCAAGGTGGTGAGTCTCG...GGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCGAGACTCACCACCTTaGACTGGGCCAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGRDSPP*TGPALC
Trigger: GCAGAGAGCTGGCCCAGTCCAAGGTGGTGAGTCTCG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGAGCTGGGGTCCCAATaGCTGAGCTTGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHELGSQ*LSLESL
Trigger: CAGGCTCTCCAAGCTCAGCCATTGGGACCCCAGCTC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGGACTCCAGAGAGTGTaGCTGCAGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGGLQRV*LQQQLQ
Trigger: CTGCAGCTGCTGCTGCAGCCACACTCTCTGGAGTCC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGATAGGCATCTGTGACTaGGACCCACCTGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEIGICD*DPPEQD
Trigger: GTCCTGTTCAGGTGGGTCCCAGTCACAGATGCCTAT...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCACAGAGGCCAGGTCCTaGCAGCAGTCAGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGTEARS*QQSDVR
Trigger: CCTCACGTCTGACTGCTGCCAGGACCTGGCCTCTGT...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCACAGAGGCCAGGTCCTaGCAGCAGTCAGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGTEARS*QQSDVR
Trigger: CCTCACGTCTGACTGCTGCCAGGACCTGGCCTCTGT...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAACACCGGTACTACCTCTaGGGAGCTTTCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQHRYYL*GAFLVA
Trigger: AGCCACGAGGAAAGCTCCCCAGAGGTAGTACCGGTG...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGTTAAAGTGGGCCATTTaGAACAGGGATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRLKWAI*NRDVST
Trigger: TGTGGACACATCCCTGTTCCAAATGGCCCACTTTAA...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAACCTCTCTGGCTTCATTaGTACTGCCGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQPLWLH*YCRRLL
Trigger: CAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGG...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGCTTCCGCATCTGGCTaGGCCTCGTGTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCASASG*ASCSQP
Trigger: TGGCTGAGAACACGAGGCCCAGCCAGATGCGGAAGC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCTCTTTGCGCCTGGATaGGATCCGGAGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCLFAPG*DPEGSR
Trigger: CCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGCAGCCCCTTTTGTCTTaGGTCTCACAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVQPLLS*VSQLQK
Trigger: CTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTG...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCTCGTCTTCTCTGGCTaGGCGGGTGTCTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVLVFSG*AGVSPE
Trigger: TTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTGGGCTGTAGGGGAATaGGGGAGAGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPWAVGE*GRVACP
Trigger: GGGGCAGGCCACTCTCCCTCATTCCCCTACAGCCCA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCQPPAV*LCEVLG
Trigger: CCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATTCCCATCTTTTCCGATaGGCTCAGCGAGACTCACCA +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHSHLFR*AQRDSP
Trigger: TGGTGAGTCTCGCTGAGCTCATCGGAAAAGATGGGA...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGCTACACCATCGAGGATaGAGAGCAGCCGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQLHHRG*RAAALA
Trigger: GGCCAGAGCGGCTGCTCTTCATCCTCGATGGTGTAG...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGGGGATGGGGTGCTCTTaGAGAATACCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGEGMGCS*RIPIFK
Trigger: CTTGAAGATGGGTATTCTTCAAGAGCACCCCATCCC...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGGTAGAGGTGGAAGGTaGCTTCCTCAGGATGGACGC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGGRGGR*LPQDGR
Trigger: GCGTCCATCCTGAGGAAGTCACCTTCCACCTCTACC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCACGAGGCCACCTCCATaGCACTCGTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGTRPPP*HSSSLA
Trigger: AGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGT...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCSLSPG*TPPAIH
Trigger: ATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTTTTCCCCAGCAAACTaGCCAGCAGTGCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWFSPAN*PAVHPP
Trigger: CGGCGGATGCACTGCTGGGCAGTTTGCTGGGGAAAA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGCTGCAGCAGCAGCTaGAGGGACGGGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSGCSSS*RDGTHC
Trigger: GCAGTGGGTCCCGTCCCTGCAGCTGCTGCTGCAGCC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCTGTTTCTACACACATaGCCATTTCTTCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: GPPESHPQECASSGPACRLFLHT*PFLRNG
Trigger: CCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAG...CCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGCAGTCGCTGTAGCTTaGAGCTCGGCTGTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCAVAVA*SSAVSV
Trigger: GACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCGCAGGAGTCCCTTTTTaGTGCCCTTCTCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSAGVPF*CPSPRV
Trigger: AACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGC...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGRLYEV*RGLASS
Trigger: GGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCT...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTGGAGCCCCGGGCTGCTaGCTCCCAGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCGAPGC*LPGFFR
Trigger: TCTGAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCC...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCCCTCTCCTGGGTCCTaGACTCCTGAGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCPSPGS*TPEINP
Trigger: AGGGTTGATCTCAGGAGTCCAGGACCCAGGAGAGGG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAATCTGCTCCCAGGTATaGAGGGCTAGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHSSRSEPGQNEAILESPICSQV*RARSQA
Trigger: GGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGAT...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGTGGAGACTCATGGTCTaGGGAGCTTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NEAILESPRTALPWTPARWRLMV*GAWKSL
Trigger: CAAGCTCTTCCAAGCTCCCCAGACCATGAGTCTCCA...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATTGGCTTGGAGACTCATaGTCTGGGGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHWLGDS*SGELGR
Trigger: TCTTCCAAGCTCCCCAGACCATGAGTCTCCAAGCCA...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTGGCTTGGAGACTCATaGTCTGGGGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSWLGDS*SGELGR
Trigger: TCTTCCAAGCTCCCCAGACCATGAGTCTCCAAGCCA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTGGATGTGGGGGCGTTaGGTGACTCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLWMWGR*VTPGLE
Trigger: CTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCA...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCATCCCCAGCACTGCTGTaGATGTGGGGGCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPSPALL*MWGRWV
Trigger: CACCCAACGCCCCCACATCCACAGCAGTGCTGGGGA...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGTTTTCCAGGGCCATGTaGAACAGAGGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVFSRAM*NRGSLS
Trigger: TGAGAGAGAGCCTCTGTTCCACATGGCCCTGGAAAA...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCGAGACTCACCACCTTaGACTGGGCCAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVRDSPP*TGPALC
Trigger: GCAGAGAGCTGGCCCAGTCCAAGGTGGTGAGTCTCG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCTGCAAGACCCATCCTaGCTCATCTACACCATCGAG +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHLQDPS*LIYTIE
Trigger: CTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCACAGGACTACCATGGTaGGGCTCCATGTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGTGLPW*GSMLIC
Trigger: ACAGATCAACATGGAGCCCCACCATGGTAGTCCTGT...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATATAGGCATCTGTGACTaGGACCCACCTGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHIGICD*DPPEQD
Trigger: GTCCTGTTCAGGTGGGTCCCAGTCACAGATGCCTAT...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGCGGTCAGGGTCTGGTTaGCTCTCAGCCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWRSGSG*LSAQRQ
Trigger: TTGCCTTTGGGCTGAGAGCCAACCAGACCCTGACCG...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGCTATGGCCTTCCGAATaGAGCAGTCACTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: QPQVPRVPDTSRTWSPGELWPSE*SSHLGS
Trigger: TGATCCCAAGTGACTGCTCCATTCGGAAGGCCATAG...CTCACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAGCGGGGGTGGCTTGTaGATTCGCACAAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSSGGGL*IRTNWN
Trigger: ATTCCAGTTTGTGCGAATCCACAAGCCACCCCCGCT...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGAACTCCGAGAACAGCTaGTCTTCTCCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRNSENS*SSPGLR
Trigger: TCGAAGCCCTGGAGAAGACCAGCTGTTCTCGGAGTT...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCACCGGTACTACCTCTaGGGAGCTTTCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHHRYYL*GAFLCN
Trigger: ATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCCACCGGTACTACCTCTaGGGAGCTTTCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSHRYYL*GAFLCN
Trigger: ATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTG...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCTTCCGCATCTGGCTaGGCCTCGTGTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCASASG*ASCSQP
Trigger: TGGCTGAGAACACGAGGCCCAGCCAGATGCGGAAGC...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCAGGACAGCCCTCCCGTaGACCCCGGCTAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSRTALP*TPARAP
Trigger: GGGGGCCCTAGCCGGGGTCCACGGGAGGGCTGTCCT...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCTCGTCTTCTCTGGCTaGGCGGGTGTCTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCLVFSG*AGVSPE
Trigger: TTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAG...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGCTGCTCCCCATACTaGGCCACCAGGTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPRCSPY*ATRYEA
Trigger: GGCCTCGTACCTGGTGGCTCAGTATGGGGAGCAGCG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCAAAACCCTTCTCTCTaGGCCCTGGGTGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHQNPSL*ALGAPR
Trigger: GCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTG...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTGTGGGGGCGTTGGGTaGCTCCTGGCTTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPCGGVG*LLAWRL
Trigger: GAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCAGGCCAGCTTCTCTTaGCCAGGGGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCQASFS*PGDLGF
Trigger: GAAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGCTGCCTGGCCAGTGTTaGCTTCCCAATTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQLPGQC*LPNSSS
Trigger: GCTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAG...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCTGCCTGGCCAGTGTTaGCTTCCCAATTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCLPGQC*LPNSSS
Trigger: GCTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTCAAGAAGGTGGAGATaGTGGCCCCATCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSSRRWR*WPHLTH
Trigger: ATGGGTTAGATGGGGCCATCATCTCCACCTTCTTGA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCTGCCCTCAATCAGCTaGAGCTTCTTCACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVLPSIS*SFFTWR
Trigger: CCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTGCAGTCCTCAGCTGTaGGGCCACAGCCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLCSPQL*GHSQPT
Trigger: GGTTGGCTGGCTGTGGCCTCACAGCTGAGGACTGCA...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCTCTCTGCCGCTTGAGTaGGGATGTGCTATTACTCAT +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTSLPLE*GCAITH
Trigger: ATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGA...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTTGGAGAGCCACAAAGTaGGGGAGGTGCACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPWRATK*GRCTAS
Trigger: GGAAGCTGTGCACCTCCCTCACTTTGTGGCTCTCCA...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCATGGAGAGCCACAAAGTaGGGGAGGTGCACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SHSSRSEPGQNEAILESPWRATK*GRCTAS
Trigger: GGAAGCTGTGCACCTCCCTCACTTTGTGGCTCTCCA...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTTTGCAGCCTGATCCCTaGTCCCAAGTGGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPLQPDP*SQVANV
Trigger: TACGTTGGCCACTTGGGATCAGGGATCAGGCTGCAA...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCCGTCTCTGTTGCACCTaGGGTTCCACGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLRLCCT*GSTAGW
Trigger: CCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACG...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGGGGCATCCAGAGGTaGAGGTACGGCTATGCGGGC +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPRGIQR*RYGYAG
Trigger: GCCCGCATAGCCGTACCTTCACCTCTGGATGCCCCG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGACGAGGCCACCTCCATaGCACTCGTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVTRPPP*HSSSLA
Trigger: AGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSSLSPG*TPPAIH
Trigger: ATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGA...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGGCTGTAGGCTGGTGTaGGCCTGTGGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPGCRLV*ACGGVP
Trigger: AGGAACGCCCCCACAGGCGCACACCAGCCTACAGCC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCAGGCTTCCTTCACCTaGCTGGCCAGTGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGQASFT*LASVDF
Trigger: GAAGTCAACACTGGCCAGGCAGGTGAAGGAAGCCTG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR GCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCAGGCTTCCTTCACCTaGCTGGCCAGTGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGQASFT*LASVDF
Trigger: GAAGTCAACACTGGCCAGGCAGGTGAAGGAAGCCTG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCTCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGSELGS*KTHPGS
Trigger: TGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGA...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATTGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHCGWLQ*RQSSEL
Trigger: GAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACA...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCAAACTGCCCAGCAGTaGATCCGCCGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLQTAQQ*IRRLWL
Trigger: CAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGAAGGAATGAGGTTCTaGAGAGCTGTGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCEGMRF*RAVVRA
Trigger: GGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGAAGGAATGAGGTTCTaGAGAGCTGTGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGEGMRF*RAVVRA
Trigger: GGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: NEAILESPRTALPWTPARSTQRA*SKEGMR
Trigger: CCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGA...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHSTQRA*SKEGMR
Trigger: CCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGA...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAATCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQSFRFI*CIRQVQ
Trigger: CTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGA...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGCAAGACATAGGACATTaGTGCAAAGAACTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: APRVSSSGVRQLWACVPAQDIGH*CKELLE
Trigger: TTCCAAGAGTTCTTTGCAGCAATGTCCTATGTCTTG...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGCAGTCGCTGTAGCTTaGAGCTCGGCTGTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVAVAVA*SSAVSV
Trigger: GACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGC...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCACAGCTGACCAGCTaGAGTCGCTGTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPPQLTS*SRCSLQ
Trigger: CTGCAAGCTACAGCGACTGCAGCTGGTCAGCTGTGG...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCACCACAGCTGACCAGCTaGAGTCGCTGTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHSSRSEPGQNEAILESPPQLTS*SRCSLQ
Trigger: CTGCAAGCTACAGCGACTGCAGCTGGTCAGCTGTGG...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCCACAGCTGACCAGCTaGAGTCGCTGTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVPQLTS*SRCSLQ
Trigger: CTGCAAGCTACAGCGACTGCAGCTGGTCAGCTGTGG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCTTTCCTCGTGGCTCTTaGCTGCAATCTCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGFPRGS*LQSQQL
Trigger: CAATTGCTGAGATTGCAGGCAAGAGCCACGAGGAAA...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGGGTACTGCCGCAGGCTaGTGGGCACTAGTATCTCCT +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLGTAAG*WALVSP
Trigger: AGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACC...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTTGGCTTCATTGGTACTaGCGCAGGCTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPWLHWY*RRLLGT
Trigger: AGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCA...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTACTGGTCCACAAAGTaGAGCAACTGCGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWYWSTK*SNCGAS
Trigger: GGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPLLSEP*VHPAGN
Trigger: ATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAATGGCTTGGAGACTCATaGTCTGGGGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQWLGDS*SGELGR
Trigger: TCTTCCAAGCTCCCCAGACCATGAGTCTCCAAGCCA...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCGCGTTGGGTGACTCCTaGCTTGGAGACTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: RVPVSTPPGSDNKVCGLLALGDS*LGDSWS
Trigger: AGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGC...GAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGCGTTGGGTGACTCCTaGCTTGGAGACTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCALGDS*LGDSWS
Trigger: AGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTGGATGTGGGGGCGTTaGGTGACTCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGWMWGR*VTPGLE
Trigger: CTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTCCCCAGCACTGCTGTaGATGTGGGGGCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLSPALL*MWGRWV
Trigger: CACCCAACGCCCCCACATCCACAGCAGTGCTGGGGA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTCCCCAGCACTGCTGTaGATGTGGGGGCGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPSPALL*MWGRWV
Trigger: CACCCAACGCCCCCACATCCACAGCAGTGCTGGGGA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGCTGGTGTGCGCCTGTaGGGGCGTTCCTACCACCGC +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFAGVRL*GRSYHR
Trigger: GCGGTGGTAGGAACGCCCCCACAGGCGCACACCAGC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGTMRGS*VSRPGP
Trigger: TGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGT...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWTMRGS*VSRPGP
Trigger: TGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGT...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCTMRGS*VSRPGP
Trigger: TGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGT...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTAGCTCGGTCAGGGTCTaGTTGGCTCTCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPSSVRV*LALSPK
Trigger: CTTTGGGCTGAGAGCCAACCAGACCCTGACCGAGCT...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGAGGGATGTGTCCACATaGCCCCCTTGGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVRDVST*PPWRAT
Trigger: TGTGGCTCTCCAAGGGGGCCATGTGGACACATCCCT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATAGAGCTCCAGTTCCTTaGGGAGTATTTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHRAPVP*GVFPAS
Trigger: GGATGCTGGAAATACTCCCCAAGGAACTGGAGCTCT...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTGCTGGTGTTCCTTCCTaGTTTCACCAAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPAGVPS*FHQGLP
Trigger: TGGGAGGCCTTGGTGAAACCAGGAAGGAACACCAGC...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAGCTGCTCTCGATACTaGTCCACAAAGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSSCSRY*STKCSN
Trigger: GTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCT...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATACTTCAGCTGCTGAGTaGCAGGAGTCCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHTSAAE*QESLFA
Trigger: AGCAAAAAGGGACTCCTGCCACTCAGCAGCTGAAGT...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPDWGPL*HPWHGH
Trigger: GTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGATTCCTCTTTGCGCCTaGATGGGATCCGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVIPLCA*MGSGGL
Trigger: GAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAAT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAAAACCCTTCTCTCTaGGCCCTGGGTGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPQNPSL*ALGAPR
Trigger: GCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCCAGCTCTCTGCAGCTaGAGTAGAAGACATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHPALCS*SRRHAG
Trigger: TCCAGCATGTCTTCTACTTCAGCTGCAGAGAGCTGG...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGCCAGCTCTCTGCAGCTaGAGTAGAAGACATGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSSRSEPGQNEAILESPRPALCS*SRRHAG
Trigger: TCCAGCATGTCTTCTACTTCAGCTGCAGAGAGCTGG...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCTGCCCTCAATCAGCTaGAGCTTCTTCACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGLPSIS*SFFTWR
Trigger: CCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTCTCTGCCGCTTGAGTaGGGATGTGCTATTACTCAT +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSSLPLE*GCAITH
Trigger: ATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWRVSAA*VRMCYY
Trigger: GTAATAGCACATCCTCACTCAAGCGGCAGAGACTCG...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGRVSAA*VRMCYY
Trigger: GTAATAGCACATCCTCACTCAAGCGGCAGAGACTCG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: HSSRSEPGQNEAILESPRSLRLA*ATWEAA
Trigger: GGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACT...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGSLRLA*ATWEAA
Trigger: GGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACT...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGCTGTGCTGTGGGTTaGTCTCACCCAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SHSSRSEPGQNEAILESPSCAVG*SHPGTG
Trigger: ACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCT...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCAGGACTGGCTCAAGCTaGACAGCTTCCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGRTGSS*TASASG
Trigger: GCCAGATGCGGAAGCTGTTCAGCTTGAGCCAGTCCT...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCGCTGTGGCCACCAGATaGGGCTCTATGAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGAVATR*GSMRSA
Trigger: TGCAGACCTCATAGAGCCTCATCTGGTGGCCACAGC...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGAAGAGCTCCTGGAGTaGGCTTTATTGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWEELLE*ALLASR
Trigger: TCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGTCCCAGGAGCCTCCTaGTCTCTGGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPVPGAS*SLGARL
Trigger: CAGCCTAGCACCCAGAGAGCAGGAGGCTCCTGGGAC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RVPVSTPPGSDNKVCGLLIPAAP*SMTMRG
Trigger: ACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAAT...GAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCCGWLQ*RQSSEL
Trigger: GAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGTGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQCGWLQ*RQSSEL
Trigger: GAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACA...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVCGWLQ*RQSSEL
Trigger: GAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGAAATATTCCTTCCTaGTGGACTCAGAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGRNIPS*WTQRTP
Trigger: TGGGGTTCTCTGAGTCCAGCAGGAAGGAATATTTCT...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTTCCGCTTCATCTGCTaGATCAGGCAAGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVFRFIC*IRQVQA
Trigger: GGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGCCCCATCTAACCCATaGTTCCTGAGGTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWAPSNP*FLRSSG
Trigger: TCCAGATGACCTCAGGAAGCATGGGTTAGATGGGGC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTGGGCTGCAGCAGCAGCTaGAGGGACGGGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: SMRNPSAPFVLGLTAPEVGCSSS*RDGTHC
Trigger: GCAGTGGGTCCCGTCCCTGCAGCTGCTGCTGCAGCC...CACTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCCTCCATGTTGATCTGTaGTGCCTGCCCTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: RVPVSTPPGSDNKVCGLLLHVDL*CLPSIS
Trigger: GCTGATTGAGGGCAGGCAGCACAGATCAACATGGAG...GAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCSRLFC*RSSSFR
Trigger: CCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGA...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATTCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSRLFC*RSSSFR
Trigger: CCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGA...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGAGGGCCCTCAGTTCCTaGCTCATCTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWRALSS*LISSLR
Trigger: TCTGAGTGATGAGATGAGGCAGGAACTGAGGGCCCT...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCTCTGATCCGAGTCTCTaGCGCTTGAGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGSDPSL*RLSEDV
Trigger: CACATCCTCACTCAAGCGGCAGAGACTCGGATCAGA...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR GCA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCTGGCTTCATTGGTACTaGCGCAGGCTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSWLHWY*RRLLGT
Trigger: AGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCA...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTACTGGTCCACAAAGTaGAGCAACTGCGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCYWSTK*SNCGAS
Trigger: GGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGACTCGGGCTATCAGCTaGTCTCGATACTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWTRAIS*SRYWST
Trigger: TGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGT...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGGTAGAGTCCATCTTTaGACTTCCGGTCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHGRVHL*TSGPRT
Trigger: AGTCCTGGGACCGGAAGTGCAAAGATGGACTCTACC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGGAGTCCCTTTTTGCTaGCCTTCTCCCAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWGVPFC*PSPRVP
Trigger: TGGAACTCTGGGAGAAGGGCAGCAAAAAGGGACTCC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGCAGGAGTCCCTTTTTaGTGCCCTTCTCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHAGVPF*CPSPRV
Trigger: AACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCACCCTCTCCTGGGTCCTaGACTCCTGAGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPPSPGS*TPEINP
Trigger: AGGGTTGATCTCAGGAGTCCAGGACCCAGGAGAGGG...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTGTGGTGACGGGAGATaGGGTGTGGGCAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLCGDGR*GVGNAH
Trigger: GTGAGCGTTGCCCACACCCCATCTCCCGTCACCACA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTTGGCGAGCAGAAGCTaGAACTCCTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCLASRS*NSFSSS
Trigger: GGAGGAGCTGAAGGAGTTCCAGCTTCTGCTCGCCAA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTTGGCGAGCAGAAGCTaGAACTCCTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVLASRS*NSFSSS
Trigger: GGAGGAGCTGAAGGAGTTCCAGCTTCTGCTCGCCAA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATATCTGCTCCCAGGTATaGAGGGCTAGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHICSQV*RARSQA
Trigger: GGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGAT...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGCATTAGCACTGCGGTaGAGGTGGGTTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLALALR*RWVGWE
Trigger: CTCCCAGCCAACCCACCTCCACCGCAGTGCTAATGC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGCATTAGCACTGCGGTaGAGGTGGGTTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPALALR*RWVGWE
Trigger: CTCCCAGCCAACCCACCTCCACCGCAGTGCTAATGC...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACT +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVPAGNS*IQGIST
Trigger: AGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSLLSEP*VHPAGN
Trigger: ATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCTGGAGACTCATGGTCTaGGGAGCTTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGWRLMV*GAWKSL
Trigger: CAAGCTCTTCCAAGCTCCCCAGACCATGAGTCTCCA...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGGAGACTCATGGTCTaGGGAGCTTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGWRLMV*GAWKSL
Trigger: CAAGCTCTTCCAAGCTCCCCAGACCATGAGTCTCCA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGCGTTGGGTGACTCCTaGCTTGGAGACTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVALGDS*LGDSWS
Trigger: AGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGC...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGGTGGGGCTGTAGGCTaGTGTGCGCCTGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYGGAVG*CAPVGA
Trigger: CGCCCCCACAGGCGCACACCAGCCTACAGCCCCACC...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCTCCCATGGGTGGTGGTaGGGCTGTAGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPSHGWW*GCRLVC
Trigger: GCACACCAGCCTACAGCCCCACCACCACCCATGGGA...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTGTAGCTCAGAGGGATaGGGTGCTCTTGAAGAATAC +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSCSSEG*GALEEY
Trigger: GTATTCTTCAAGAGCACCCCATCCCTCTGAGCTACA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCGTCTCGTACAAGCAGTaGAGGGACTCCAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGVSYKQ*RDSREC
Trigger: ACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGAC...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGTCTCGTACAAGCAGTaGAGGGACTCCAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGVSYKQ*RDSREC
Trigger: ACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGAC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCACAGAGGCCAGGTCCTaGCAGCAGTCAGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPTEARS*QQSDVR
Trigger: CCTCACGTCTGACTGCTGCCAGGACCTGGCCTCTGT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCTCACTCAGAGTTGTCTaGTCCAGCCCCAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: PFCLGSHSSRSEPGQNEASLRVV*SSPRRM
Trigger: CATACGCCTGGGGCTGGACCAGACAACTCTGAGTGA...GGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCCAAGACAAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCTGCAATCTCAGCAATTaGGAAGATCTTGCTCACGTC +
Preference number: 4 (lower is better)
Translates to: PGQNEAILESPRTALPWTCNLSN*EDLAHV
Trigger: GACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCA...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAGGGGAGCTTTCCTCGTaGCTCTTGCCTGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: SHSSRSEPGQNEAILESPGELSS*LLPAIS
Trigger: TGAGATTGCAGGCAAGAGCCACGAGGAAAGCTCCCC...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSHSSRSEPGQNEAILESHPAVL*VDLTQE
Trigger: TTCCTGGGTGAGATCAACCCACAGCACAGCTGGATG...GGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTAGGGATGTGTCCACATaGCCCCCTTGGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCRDVST*PPWRAT
Trigger: TGTGGCTCTCCAAGGGGGCCATGTGGACACATCCCT...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAAGCGCAGGGCATTATaGATCATTTTCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGKRRAL*IIFRRT
Trigger: AGTCCTCCTGAAAATGATCCATAATGCCCTGCGCTT...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGAACTCCGAGAACAGCTaGTCTTCTCCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWNSENS*SSPGLR
Trigger: TCGAAGCCCTGGAGAAGACCAGCTGTTCTCGGAGTT...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGCTTCCGCATCTGGCTaGGCCTCGTGTTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLASASG*ASCSQP
Trigger: TGGCTGAGAACACGAGGCCCAGCCAGATGCGGAAGC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGTGGCATCCCTGGCATaGACACATAATGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHVASLA*THNAQQ
Trigger: TTGCTGGGCATTATGTGTCCATGCCAGGGATGCCAC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCTCTTTGCGCCTGGATaGGATCCGGAGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLLFAPG*DPEGSR
Trigger: CCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTTCCCTAGGGATCAGGTaGTTTTCCCGCACGAACTCT +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPSLGIR*FSRTNS
Trigger: AGAGTTCGTGCGGGAAAACCACCTGATCCCTAGGGA...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGAACAGAGATGGCCGGTaGGTAAATATCTTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRNRDGR*VNILPR
Trigger: CCTTGGCAAGATATTTACCCACCGGCCATCTCTGTT...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCAAAACCCTTCTCTCTaGGCCCTGGGTGCACCCCGC +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFQNPSL*ALGAPR
Trigger: GCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTAGCTTGGTAGAGGAGTaGGGCAGAGATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPSLVEE*GRDFSP
Trigger: TGGAGAGAAATCTCTGCCTCACTCCTCTACCAAGCT...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATAGCTTGGTAGAGGAGTaGGGCAGAGATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSLVEE*GRDFSP
Trigger: TGGAGAGAAATCTCTGCCTCACTCCTCTACCAAGCT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCCAGCTCTCTGCAGCTaGAGTAGAAGACATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCPALCS*SRRHAG
Trigger: TCCAGCATGTCTTCTACTTCAGCTGCAGAGAGCTGG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTCCCATCTTTTCCGATaGGCTCAGCGAGACTCACCA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCSHLFR*AQRDSP
Trigger: TGGTGAGTCTCGCTGAGCTCATCGGAAAAGATGGGA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCTGTGGTCCGAGCCGTaGTCAGGAAGGATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFLWSEP*SGRMPR
Trigger: CCGAGGCATCCTTCCTGATCACGGCTCGGACCACAG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGGAGAGCAGAGGTCTCTaGGCTGGGGTCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRESRGL*AGVPMA
Trigger: AGCCATTGGGACCCCAGCTCAGAGACCTCTGCTCTC...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGTCAAGAAGGTGGAGATaGTGGCCCCATCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: HSSRSEPGQNEAILESPRSRRWR*WPHLTH
Trigger: ATGGGTTAGATGGGGCCATCATCTCCACCTTCTTGA...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTCAAGAAGGTGGAGATaGTGGCCCCATCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWSRRWR*WPHLTH
Trigger: ATGGGTTAGATGGGGCCATCATCTCCACCTTCTTGA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGGGATGGGGTGCTCTTaGAGAATACCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWGMGCS*RIPIFK
Trigger: CTTGAAGATGGGTATTCTTCAAGAGCACCCCATCCC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVSLRLA*ATWEAA
Trigger: GGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAGGACTGGCTCAAGCTaGACAGCTTCCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPRTGSS*TASASG
Trigger: GCCAGATGCGGAAGCTGTTCAGCTTGAGCCAGTCCT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCAGTTCCATAATGAGGTaGGGATGGGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCSSIMR*GWVSFR
Trigger: CCTGAAGGAGACCCATCCTCACCTCATTATGGAACT...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCAGATGAGGCTCTATaGGGTCTGCAGGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPDEAL*GLQGSC
Trigger: GCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTAGTGGAGCCCCGGGCTaGTGGCTCCCAGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFSGAPG*WLPGFF
Trigger: GAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCCACT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATAACAGTGCTGTCCTTTaGCTTGGCTCTTACCGTCTC +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHNSAVL*LGSYRL
Trigger: GAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGATCAGGTGGTTTTCCCGCACGAACTCTTGTCAATGAGAAATCCCTCAGCCCCGACCTCAGCCCCATCTaGTCCCAGGTATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSGGFPARTLVNEKSLSPDLSPI*SQVWRA
Trigger: AGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTC...GGGGCTGAGGGATTTCTCATTGACAAGAGTTCGTGCGGGAAAACCACCTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCAAACTGCCCAGCAGTaGATCCGCCGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSQTAQQ*IRRLWL
Trigger: CAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSTQRA*SKEGMR
Trigger: CCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGA...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAGAAATATTCCTTCCTaGTGGACTCAGAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSRNIPS*WTQRTP
Trigger: TGGGGTTCTCTGAGTCCAGCAGGAAGGAATATTTCT...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATAGAAATATTCCTTCCTaGTGGACTCAGAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHRNIPS*WTQRTP
Trigger: TGGGGTTCTCTGAGTCCAGCAGGAAGGAATATTTCT...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTGCCCCATCTAACCCATaGTTCCTGAGGTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPAPSNP*FLRSSG
Trigger: TCCAGATGACCTCAGGAAGCATGGGTTAGATGGGGC...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTTGATCTGTGCTGCCTaGCCTCAATCAGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLLICAA*PQSAEA
Trigger: AGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCTCCATGTTGATCTGTaGTGCCTGCCCTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCLHVDL*CLPSIS
Trigger: GCTGATTGAGGGCAGGCAGCACAGATCAACATGGAG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAACAAAGACTCTTCACTaGAGAGTGGCTCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQTKTLH*RVAQRV
Trigger: AACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGT...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCCACAGCTGACCAGCTaGAGTCGCTGTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLPQLTS*SRCSLQ
Trigger: CTGCAAGCTACAGCGACTGCAGCTGGTCAGCTGTGG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGAGGGCCCTCAGTTCCTaGCTCATCTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVRALSS*LISSLR
Trigger: TCTGAGTGATGAGATGAGGCAGGAACTGAGGGCCCT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTACTCGGGCTATCAGCTaGTCTCGATACTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCTRAIS*SRYWST
Trigger: TGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGT...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCTCAGCACCTGTCCATaGAGTTTGTCCAAGACAACC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCLSTCP*SLSKTT
Trigger: GGTTGTCTTGGACAAACTGCATGGACAGGTGCTGAG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp ACAGCCCTCCCGTGGACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGGCAGGGTTAGAGCGCTaGGTTTTAACATTTAACATT +
Preference number: 4 (lower is better)
Translates to: TALPWTPARAPRVSSSGVAGLER*VLTFNI
Trigger: AATGTTAAATGTTAAAACGCAGCGCTCTAACCCTGC...CACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGTCCACGGGAGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTTTGGCGAGCAGAAGCTaGAACTCCTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCLASRS*NSFSSS
Trigger: GGAGGAGCTGAAGGAGTTCCAGCTTCTGCTCGCCAA...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGHPKSS*SALYWR
Trigger: TCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTTGGCTTGGAGACTCATaGTCTGGGGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPWLGDS*SGELGR
Trigger: TCTTCCAAGCTCCCCAGACCATGAGTCTCCAAGCCA...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTCCCATGGGTGGTGGTaGGGCTGTAGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLSHGWW*GCRLVC
Trigger: GCACACCAGCCTACAGCCCCACCACCACCCATGGGA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCCATGGGTGGTGGTaGGGCTGTAGGCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSSHGWW*GCRLVC
Trigger: GCACACCAGCCTACAGCCCCACCACCACCCATGGGA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCGGGGATCTTGGCTTCTaGGGTGAGGTCTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGGDLGF*GEVFVE
Trigger: TTCTACAAAGACCTCACCCCAGAAGCCAAGATCCCC...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCTTCCTTCACCTGCCTaGCCAGTGTTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLLPSPA*PVLTSQ
Trigger: TTGGGAAGTCAACACTGGCCAGGCAGGTGAAGGAAG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAGAAGAGCAGCCGCTCTaGCCTAGACAGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPEEQPL*PRQDLS
Trigger: AGACAGATCCTGTCTAGGCCAGAGCGGCTGCTCTTC...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCGAAGAGCAGCCGCTCTaGCCTAGACAGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGEEQPL*PRQDLS
Trigger: AGACAGATCCTGTCTAGGCCAGAGCGGCTGCTCTTC...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGAGCTGGGGTCCCAATaGCTGAGCTTGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSELGSQ*LSLESL
Trigger: CAGGCTCTCCAAGCTCAGCCATTGGGACCCCAGCTC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGPIGNV*LMPQTG
Trigger: GCCTGTTTGGGGCATCAACCACACGTTTCCTATTGG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CCA 90 bp GGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: GSHSSRSEPGQNEAILESPIGNV*LMPQTG
Trigger: GCCTGTTTGGGGCATCAACCACACGTTTCCTATTGG...GGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTATAGGCATCTGTGACTaGGACCCACCTGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCIGICD*DPPEQD
Trigger: GTCCTGTTCAGGTGGGTCCCAGTCACAGATGCCTAT...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGATAGGCATCTGTGACTaGGACCCACCTGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVIGICD*DPPEQD
Trigger: GTCCTGTTCAGGTGGGTCCCAGTCACAGATGCCTAT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCLFTAE*LSEFPL
Trigger: AAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCGGTCAGGGTCTGGTTaGCTCTCAGCCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLRSGSG*LSAQRQ
Trigger: TTGCCTTTGGGCTGAGAGCCAACCAGACCCTGACCG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGCTGTCTCAGTCTCTaGCAAAGGTGTTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCGCLSL*QRCLAP
Trigger: TGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCC...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTAGCAGAGACCCGTGTTaGGCCAGCGGTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLSRDPC*ASGRSQ
Trigger: CTGGCTCCTACCGCTGGCCCAACACGGGTCTCTGCT...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTAGCAGAGACCCGTGTTaGGCCAGCGGTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSSRDPC*ASGRSQ
Trigger: CTGGCTCCTACCGCTGGCCCAACACGGGTCTCTGCT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCHPAVL*VDLTQE
Trigger: TTCCTGGGTGAGATCAACCCACAGCACAGCTGGATG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCTATGGCCTTCCGAATaGAGCAGTCACTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGLWPSE*SSHLGS
Trigger: TGATCCCAAGTGACTGCTCCATTCGGAAGGCCATAG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTAACTCCGAGAACAGCTaGTCTTCTCCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCNSENS*SSPGLR
Trigger: TCGAAGCCCTGGAGAAGACCAGCTGTTCTCGGAGTT...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGAACTCCGAGAACAGCTaGTCTTCTCCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVNSENS*SSPGLR
Trigger: TCGAAGCCCTGGAGAAGACCAGCTGTTCTCGGAGTT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGACTGCCGCAGGCTGCTaGGCACTAGTATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRTAAGC*ALVSPG
Trigger: GCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGT...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCCAGTTCCTTCCGAATaGAGCAGTCACTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGPVPSE*SSHLGS
Trigger: TGATCCCAAGTGACTGCTCCATTCGGAAGGAACTGG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269280.8
ENST00000571451.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGAGGCATGAGATCTCCTaGTTTCACCAAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVRHEIS*FHQGLP
Trigger: TGGGAGGCCTTGGTGAAACCAGGAGATCTCATGCCT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCAACAGCTTCCGCATCTaGCTGGGCCTCGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGNSFRI*LGLVFS
Trigger: TGAGAACACGAGGCCCAGCCAGATGCGGAAGCTGTT...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGACTTCAGCTGCTGAGTaGCAGGAGTCCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWTSAAE*QESLFA
Trigger: AGCAAAAAGGGACTCCTGCCACTCAGCAGCTGAAGT...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCTTGCCAGCTCCAGATaGACATTCCCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCLASSR*TFPEML
Trigger: CAGCATCTCAGGGAATGTCCATCTGGAGCTGGCAAG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCATTCCTCTTTGCGCCTaGATGGGATCCGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLIPLCA*MGSGGL
Trigger: GAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAAT...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCCTGAGATCAACCCTTaGGCTGCAAGGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCPEINP*AARLRR
Trigger: TCTTCTCAGCCTTGCAGCTCAAGGGTTGATCTCAGG...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCCTGAGATCAACCCTTaGGCTGCAAGGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGPEINP*AARLRR
Trigger: TCTTCTCAGCCTTGCAGCTCAAGGGTTGATCTCAGG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCTGGGTCCTGGACTCCTaGGATCAACCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSWVLDS*DQPLSC
Trigger: GCAGCTCAAGGGTTGATCTCAGGAGTCCAGGACCCA...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTGGTGCTAGGCTGGGCTaGGGTGGGGATCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIGARLG*GGDPQL
Trigger: GAGCTGGGGATCCCCACCTCAGCCCAGCCTAGCACC...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGTGCTAGGCTGGGCTaGGGTGGGGATCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGARLG*GGDPQL
Trigger: GAGCTGGGGATCCCCACCTCAGCCCAGCCTAGCACC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTGGTGCTAGGCTGGGCTaGGGTGGGGATCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFGARLG*GGDPQL
Trigger: GAGCTGGGGATCCCCACCTCAGCCCAGCCTAGCACC...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAATGTGTAGTAAATTCCTaGCGTTTCATCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQCVVNS*RFIQRP
Trigger: TGGCCTCTGGATGAAACGTCAGGAATTTACTACACA...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCTGCCTGGCCAGTGTTaGCTTCCCAATTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSLPGQC*LPNSSS
Trigger: GCTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCATCCCATCTTTTCCGATaGGCTCAGCGAGACTCACCA +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPSHLFR*AQRDSP
Trigger: TGGTGAGTCTCGCTGAGCTCATCGGAAAAGATGGGA...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGAGAGCAGAGGTCTCTaGGCTGGGGTCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLESRGL*AGVPMA
Trigger: AGCCATTGGGACCCCAGCTCAGAGACCTCTGCTCTC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGAGAGCAGAGGTCTCTaGGCTGGGGTCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFESRGL*AGVPMA
Trigger: AGCCATTGGGACCCCAGCTCAGAGACCTCTGCTCTC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGGATGGGGTGCTCTTaGAGAATACCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCGMGCS*RIPIFK
Trigger: CTTGAAGATGGGTATTCTTCAAGAGCACCCCATCCC...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCTGCAGGCAGGATGCCTaGGCCCCTCACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSCRQDA*APHRAV
Trigger: GACTGCTCTGTGAGGGGCTCAGGCATCCTGCCTGCA...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTCTCTGCCGCTTGAGTaGGGATGTGCTATTACTCAT +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGSLPLE*GCAITH
Trigger: ATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAGCTGTGCTGTGGGTTaGTCTCACCCAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPSCAVG*SHPGTG
Trigger: ACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCTGGAGAGCCACAAAGTaGGGGAGGTGCACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPWRATK*GRCTAS
Trigger: GGAAGCTGTGCACCTCCCTCACTTTGTGGCTCTCCA...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATTGCAGCCTGATCCCTaGTCCCAAGTGGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSLQPDP*SQVANV
Trigger: TACGTTGGCCACTTGGGATCAGGGATCAGGCTGCAA...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCAGATGGACATTCCCTaGGATGCTGTTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGQMDIP*DAVRPP
Trigger: AGGTGGCCTAACAGCATCTCAGGGAATGTCCATCTG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCTTGGGGCTCACCCTGTaGCACAGCCAGAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSLGLTL*HSQRQM
Trigger: CATTTGCCTCTGGCTGTGTCACAGGGTGAGCCCCAA...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTGAAGAGCTCCTGGAGTaGGCTTTATTGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCEELLE*ALLASR
Trigger: TCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTC...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPSELGS*KTHPGS
Trigger: TGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSCGWLQ*RQSSEL
Trigger: GAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACA...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCTTTTCCCCAGCAAACTaGCCAGCAGTGCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSFSPAN*PAVHPP
Trigger: CGGCGGATGCACTGCTGGGCAGTTTGCTGGGGAAAA...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCATCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPSFRFI*CIRQVQ
Trigger: CTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGA...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGSFRFI*CIRQVQ
Trigger: CTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTGGCTGCAGCAGCAGCTaGAGGGACGGGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIGCSSS*RDGTHC
Trigger: GCAGTGGGTCCCGTCCCTGCAGCTGCTGCTGCAGCC...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGTTGATCTGTGCTGCCTaGCCTCAATCAGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQLICAA*PQSAEA
Trigger: AGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAA...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGCAGTCGCTGTAGCTTaGAGCTCGGCTGTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSAVAVA*SSAVSV
Trigger: GACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCCACAGCTGACCAGCTaGAGTCGCTGTAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSPQLTS*SRCSLQ
Trigger: CTGCAAGCTACAGCGACTGCAGCTGGTCAGCTGTGG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCTTTCCTCGTGGCTCTTaGCTGCAATCTCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGFPRGS*LQSQQL
Trigger: CAATTGCTGAGATTGCAGGCAAGAGCCACGAGGAAA...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTGGAGTGCGCTTTATTaGCGAGCAGAAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCWSALY*RAEAGT
Trigger: AGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCACACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSHPKSS*SALYWR
Trigger: TCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTG...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPHPKSS*SALYWR
Trigger: TCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGCCACTCGTCTTCTCTaGCTGAGCGGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLATRLL*LSGCLT
Trigger: GGTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTATCTGCTCCCAGGTATaGAGGGCTAGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLICSQV*RARSQA
Trigger: GGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGAT...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGCGGTGGAGGTGGGTTaGCTGGGAGACCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPAVEVG*LGDPRW
Trigger: CCACCTGGGGTCTCCCAGCCAACCCACCTCCACCGC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACT +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPAGNS*IQGIST
Trigger: AGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGCACTGCTGTGGATGTaGGGGCGTTGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLALLWM*GRWVTP
Trigger: AGGAGTCACCCAACGCCCCCACATCCACAGCAGTGC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTTTTCCAGGGCCATGTaGAACAGAGGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVFSRAM*NRGSLS
Trigger: TGAGAGAGAGCCTCTGTTCCACATGGCCCTGGAAAA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGGGGATCTTGGCTTCTaGGGTGAGGTCTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVGDLGF*GEVFVE
Trigger: TTCTACAAAGACCTCACCCCAGAAGCCAAGATCCCC...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLTMRGS*VSRPGP
Trigger: TGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGT...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCTTCCTGAGGTCATCTaGACTGAAAAGGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHLPEVI*TEKGLF
Trigger: AAAAAGACCCTTTTCAGTCCAGATGACCTCAGGAAG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGCTTCCTGAGGTCATCTaGACTGAAAAGGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: APPGTSLDSSGQRQQSLRLPEVI*TEKGLF
Trigger: AAAAAGACCCTTTTCAGTCCAGATGACCTCAGGAAG...CCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGTGTAGCTCAGAGGGATaGGGTGCTCTTGAAGAATAC +
Preference number: 4 (lower is better)
Translates to: HSSRSEPGQNEAILESPRCSSEG*GALEEY
Trigger: GTATTCTTCAAGAGCACCCCATCCCTCTGAGCTACA...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCPIGNV*LMPQTG
Trigger: GCCTGTTTGGGGCATCAACCACACGTTTCCTATTGG...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGGACTCCAGAGAGTGTaGCTGCAGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLGLQRV*LQQQLQ
Trigger: CTGCAGCTGCTGCTGCAGCCACACTCTCTGGAGTCC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCCCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLPISSK*AITCVR
Trigger: CCTGACACAAGTGATGGCCCATTTCGAAGAAATGGG...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTACAGGACTACCATGGTaGGGCTCCATGTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPTGLPW*GSMLIC
Trigger: ACAGATCAACATGGAGCCCCACCATGGTAGTCCTGT...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCAGCTCGGTCAGGGTCTaGTTGGCTCTCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSSSVRV*LALSPK
Trigger: CTTTGGGCTGAGAGCCAACCAGACCCTGACCGAGCT...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCACTCAGAGTTGTCTaGTCCAGCCCCAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSSLRVV*SSPRRM
Trigger: CATACGCCTGGGGCTGGACCAGACAACTCTGAGTGA...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATAGGGGTCATCACACTTaGTTTCCGTCTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHRGHHT*FPSAED
Trigger: ATCTTCAGCAGACGGAAACCAAGTGTGATGACCCCT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTATCTCACCCAGGAACTaGTCCCACACACAGAATTCA +
Preference number: 4 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPISPRN*SHTQNS
Trigger: TGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGAT...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCATCTCACCCAGGAACTaGTCCCACACACAGAATTCA +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGISPRN*SHTQNS
Trigger: TGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGAT...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCHPAVL*VDLTQE
Trigger: TTCCTGGGTGAGATCAACCCACAGCACAGCTGGATG...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGAATGGAGCAGTCACTTaGGATCAGGTAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWNGAVT*DQVEVE
Trigger: TTCCACCTCTACCTGATCCCAAGTGACTGCTCCATT...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTGGGGTCAGCGGGGGTaGCTTGTGGATTCGCACAAA +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRWGQRG*LVDSHK
Trigger: TTTGTGCGAATCCACAAGCCACCCCCGCTGACCCCA...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCTGGGGTCAGCGGGGGTaGCTTGTGGATTCGCACAAA +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPWGQRG*LVDSHK
Trigger: TTTGTGCGAATCCACAAGCCACCCCCGCTGACCCCA...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATGGTTCCACGGCTGGCTaGTGTTCCTTCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHGSTAG*CSFLVS
Trigger: TGAAACCAGGAAGGAACACCAGCCAGCCGTGGAACC...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTTCCGGTCCCAGGACTaGCTCAAGCTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPFRSQD*LKLNSF
Trigger: GAAGCTGTTCAGCTTGAGCCAGTCCTGGGACCGGAA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCCCCTGTGGCATCCCTaGCATGGACACATAATGCCC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSPLWHP*HGHIMP
Trigger: GGGCATTATGTGTCCATGCCAGGGATGCCACAGGGG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCACAGCCAGAGGCAAATaGTTCCATGTCCCTCCTATT +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCTARGK*FHVPPI
Trigger: AATAGGAGGGACATGGAACCATTTGCCTCTGGCTGT...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAATATCTTGCCAAGGTaGTTCCTGGTATTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGNILPR*FLVLSL
Trigger: AAGGCTTAATACCAGGAACCACCTTGGCAAGATATT...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGATGAGTAAACAGAGATaGCCGGTGGGTAAATATCTT +
Preference number: 4 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVMSKQR*PVGKYL
Trigger: AAGATATTTACCCACCGGCCATCTCTGTTTACTCAT...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCTGAGATCAACCCTTaGGCTGCAAGGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPEINP*AARLRR
Trigger: TCTTCTCAGCCTTGCAGCTCAAGGGTTGATCTCAGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTGGGTCCTGGACTCCTaGGATCAACCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSWVLDS*DQPLSC
Trigger: GCAGCTCAAGGGTTGATCTCAGGAGTCCAGGACCCA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACGCTGCTCCCCATACTaGGCCACCAGGTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPRCSPY*ATRYEA
Trigger: GGCCTCGTACCTGGTGGCTCAGTATGGGGAGCAGCG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCAGGCCAGCTTCTCTTaGCCAGGGGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFQASFS*PGDLGF
Trigger: GAAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCCAGCTCTCTGCAGCTaGAGTAGAAGACATGCTGGA +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLPALCS*SRRHAG
Trigger: TCCAGCATGTCTTCTACTTCAGCTGCAGAGAGCTGG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTCCCATCTTTTCCGATaGGCTCAGCGAGACTCACCA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPSHLFR*AQRDSP
Trigger: TGGTGAGTCTCGCTGAGCTCATCGGAAAAGATGGGA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCCAGAGCTCTTTGTTTaGTTTGACCAACCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCPELFV*FDQPKG
Trigger: GCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCCAGAGCTCTTTGTTTaGTTTGACCAACCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGPELFV*FDQPKG
Trigger: GCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATTCTTGGAAGTCAGTGTaGGTTTTTCCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSWKSV*VFPSAS
Trigger: TGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGA...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTTGCAGGCAGGATGCCTaGGCCCCTCACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMICRQDA*APHRAV
Trigger: GACTGCTCTGTGAGGGGCTCAGGCATCCTGCCTGCA...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTGGTAGAGGTGGAAGGTaGCTTCCTCAGGATGGACGC +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSGRGGR*LPQDGR
Trigger: GCGTCCATCCTGAGGAAGTCACCTTCCACCTCTACC...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTAGGACTGGCTCAAGCTaGACAGCTTCCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLRTGSS*TASASG
Trigger: GCCAGATGCGGAAGCTGTTCAGCTTGAGCCAGTCCT...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTTGGGGCTCACCCTGTaGCACAGCCAGAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFLGLTL*HSQRQM
Trigger: CATTTGCCTCTGGCTGTGTCACAGGGTGAGCCCCAA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTACGAGGCCACCTCCATaGCACTCGTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSTRPPP*HSSSLA
Trigger: AGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTCGTTCCTACCACCGCTaGCCATGGGGGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIRSYHR*PWGPAF
Trigger: AAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGAACG...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCGTGATCAGGAAGGATaGCTCGGGAAGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHRDQEG*LGKYSF
Trigger: AAAACTATACTTCCCGAGGCATCCTTCCTGATCACG...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCGTGATCAGGAAGGATaGCTCGGGAAGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGRDQEG*LGKYSF
Trigger: AAAACTATACTTCCCGAGGCATCCTTCCTGATCACG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGGAAGGAATGAGGTTCTaGAGAGCTGTGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLREGMRF*RAVVRA
Trigger: GGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTC...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCTCCATGTTGATCTGTaGTGCCTGCCCTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPLHVDL*CLPSIS
Trigger: GCTGATTGAGGGCAGGCAGCACAGATCAACATGGAG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTACAAAGACTCTTCACTaGAGAGTGGCTCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCTKTLH*RVAQRV
Trigger: AACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGT...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCATCCAGGTTGTTCTaGTGCAGGTCTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGSSRLF*CRSSSF
Trigger: GAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATAGGGCCCTCAGTTCCTaGCTCATCTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHRALSS*LISSLR
Trigger: TCTGAGTGATGAGATGAGGCAGGAACTGAGGGCCCT...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGCCACCATCCAGCTGTaGTGTGGGTTGATCTCACCC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLATIQL*CGLISP
Trigger: GGGTGAGATCAACCCACAGCACAGCTGGATGGTGGC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTTCTTGTCTTTCACTTaGAGCCTGATCCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLFLSFT*SLIPDP
Trigger: GGGATCAGGGATCAGGCTGCAAGTGAAAGACAAGAA...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTTTCTCAGACCCACCTaGGGTCTACTCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRFLRPT*GLLRPP
Trigger: AGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAA...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGTGAAGGTACGGCTATaGGGGCTGGAGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFVKVRL*GLEGSE
Trigger: CTCTGATCCCTCCAGCCCGCATAGCCGTACCTTCAC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGGAGTCCCTTTTTGCTaGCCTTCTCCCAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLGVPFC*PSPRVP
Trigger: TGGAACTCTGGGAGAAGGGCAGCAAAAAGGGACTCC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGGTCTGCAGGGGTCTTaGCAGCTCCAGATGGACATT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPGLQGS*QLQMDI
Trigger: AATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTGCTGTCCTTTGCCTTaGCTCTTACCGTCTCTTATT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWCCPLP*LLPSLI
Trigger: AATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCTTGGCGAGCAGAAGCTaGAACTCCTTCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSLASRS*NSFSSS
Trigger: GGAGGAGCTGAAGGAGTTCCAGCTTCTGCTCGCCAA...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGGGAATGAGGGAGAGTaGCCTGCCCCTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYGNEGE*PAPSWA
Trigger: AGCCCAGGAAGGGGCAGGCCACTCTCCCTCATTCCC...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGCGTTGGGTGACTCCTaGCTTGGAGACTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSALGDS*LGDSWS
Trigger: AGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAGGGGATCTTGGCTTCTaGGGTGAGGTCTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPGDLGF*GEVFVE
Trigger: TTCTACAAAGACCTCACCCCAGAAGCCAAGATCCCC...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTCGGTCCCCATACAGCTaGCCTCTCCCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIRSPYS*PLPQAS
Trigger: GGAAGCCTGGGGGAGAGGCCAGCTGTATGGGGACCG...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTGTAGCTCAGAGGGATaGGGTGCTCTTGAAGAATAC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVCSSEG*GALEEY
Trigger: GTATTCTTCAAGAGCACCCCATCCCTCTGAGCTACA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGTCTCGTACAAGCAGTaGAGGGACTCCAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPVSYKQ*RDSREC
Trigger: ACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGAC...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSLFTAE*LSEFPL
Trigger: AAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAG...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTAGCTCGGTCAGGGTCTaGTTGGCTCTCAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLSSVRV*LALSPK
Trigger: CTTTGGGCTGAGAGCCAACCAGACCCTGACCGAGCT...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCTCACTCAGAGTTGTCTaGTCCAGCCCCAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSSLRVV*SSPRRM
Trigger: CATACGCCTGGGGCTGGACCAGACAACTCTGAGTGA...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLHPAVL*VDLTQE
Trigger: TTCCTGGGTGAGATCAACCCACAGCACAGCTGGATG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCAGAGCTCCAGTTCCTTaGGGAGTATTTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSRAPVP*GVFPAS
Trigger: GGATGCTGGAAATACTCCCCAAGGAACTGGAGCTCT...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCACTTCAGCTGCTGAGTaGCAGGAGTCCCTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGTSAAE*QESLFA
Trigger: AGCAAAAAGGGACTCCTGCCACTCAGCAGCTGAAGT...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCGGAAGGCAAACCAGATaGCAACTTGTTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCGRQTR*QLVCRE
Trigger: TTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCC...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGTGGCATCCCTGGCATaGACACATAATGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPVASLA*THNAQQ
Trigger: TTGCTGGGCATTATGTGTCCATGCCAGGGATGCCAC...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPDWGPL*HPWHGH
Trigger: GTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAATTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQLGHLD*GPLWHP
Trigger: GGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAA...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATTAGGCCACCTGGACTaGGGCCCCCTGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLGHLD*GPLWHP
Trigger: GGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CAA 72 bp ATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTaGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: ISQTHLRSTQAS*SSTKPSLASLV
Trigger: TACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
3UTR CAA 72 bp CAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTaGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: QRQQSLRSTQAS*SSTKPSLASLV
Trigger: TACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
3UTR CAA 72 bp CTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTaGGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLSMRNPSAPFV*GLTAPEVSRAR
Trigger: TCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCTGGGCTGTAGGGGAATaGGGGAGAGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFWAVGE*GRVACP
Trigger: GGGGCAGGCCACTCTCCCTCATTCCCCTACAGCCCA...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAGCTTGGTAGAGGAGTaGGGCAGAGATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPSLVEE*GRDFSP
Trigger: TGGAGAGAAATCTCTGCCTCACTCCTCTACCAAGCT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGGTGCTAGGCTGGGCTaGGGTGGGGATCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRGARLG*GGDPQL
Trigger: GAGCTGGGGATCCCCACCTCAGCCCAGCCTAGCACC...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCCAGGCCAGCTTCTCTTaGCCAGGGGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSQASFS*PGDLGF
Trigger: GAAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTG...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCAGGGATGGGGTGCTCTTaGAGAATACCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSGMGCS*RIPIFK
Trigger: CTTGAAGATGGGTATTCTTCAAGAGCACCCCATCCC...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGGGATGGGGTGCTCTTaGAGAATACCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLGMGCS*RIPIFK
Trigger: CTTGAAGATGGGTATTCTTCAAGAGCACCCCATCCC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCAGTTCCATAATGAGGTaGGGATGGGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLSSIMR*GWVSFR
Trigger: CCTGAAGGAGACCCATCCTCACCTCATTATGGAACT...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTAGTGGAGCCCCGGGCTaGTGGCTCCCAGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCISGAPG*WLPGFF
Trigger: GAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCCACT...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTAGTGGAGCCCCGGGCTaGTGGCTCCCAGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFSGAPG*WLPGFF
Trigger: GAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCCACT...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCAACAGTGCTGTCCTTTaGCTTGGCTCTTACCGTCTC +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLNSAVL*LGSYRL
Trigger: GAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTT...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTGACCTCAGCCCCATCTaGTCCCAGGTATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIDLSPI*SQVWRA
Trigger: AGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTC...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTCGTTCCTACCACCGCTaGCCATGGGGGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFRSYHR*PWGPAF
Trigger: AAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGAACG...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCGTGATCAGGAAGGATaGCTCGGGAAGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLRDQEG*LGKYSF
Trigger: AAAACTATACTTCCCGAGGCATCCTTCCTGATCACG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGCTCCATGTTGATCTGTaGTGCCTGCCCTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRLHVDL*CLPSIS
Trigger: GCTGATTGAGGGCAGGCAGCACAGATCAACATGGAG...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCTCTGATCCGAGTCTCTaGCGCTTGAGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSSDPSL*RLSEDV
Trigger: CACATCCTCACTCAAGCGGCAGAGACTCGGATCAGA...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPVQQRP*HHPAVL
Trigger: CAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGAC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGGTAGAGTCCATCTTTaGACTTCCGGTCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPGRVHL*TSGPRT
Trigger: AGTCCTGGGACCGGAAGTGCAAAGATGGACTCTACC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGGTCTGCAGGGGTCTTaGCAGCTCCAGATGGACATT +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLGLQGS*QLQMDI
Trigger: AATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGAGCCCCGGGCTGCTaGCTCCCAGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGAPGC*LPGFFR
Trigger: TCTGAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTTGTGGTGACGGGAGATaGGGTGTGGGCAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMICGDGR*GVGNAH
Trigger: GTGAGCGTTGCCCACACCCCATCTCCCGTCACCACA...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGGCCCCTTCCTGGGCTTaGGCGCACAGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEAPSWA*AHSDLS
Trigger: GCTGAGGTCACTGTGCGCCCAAGCCCAGGAAGGGGC...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGCGGTGGAGGTGGGTTaGCTGGGAGACCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRAVEVG*LGDPRW
Trigger: CCACCTGGGGTCTCCCAGCCAACCCACCTCCACCGC...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACT +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSPAGNS*IQGIST
Trigger: AGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAAT +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCILLSEP*VHPAGN
Trigger: ATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAG...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATTTTTCCAGGGCCATGTaGAACAGAGGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHFSRAM*NRGSLS
Trigger: TGAGAGAGAGCCTCTGTTCCACATGGCCCTGGAAAA...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSTMRGS*VSRPGP
Trigger: TGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTGAGCTGGGGTCCCAATaGCTGAGCTTGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIELGSQ*LSLESL
Trigger: CAGGCTCTCCAAGCTCAGCCATTGGGACCCCAGCTC...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPIGNV*LMPQTG
Trigger: GCCTGTTTGGGGCATCAACCACACGTTTCCTATTGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLLFTAE*LSEFPL
Trigger: AAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCCGGTCAGGGTCTGGTTaGCTCTCAGCCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSRSGSG*LSAQRQ
Trigger: TTGCCTTTGGGCTGAGAGCCAACCAGACCCTGACCG...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGGGCTGTCTCAGTCTCTaGCAAAGGTGTTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRGCLSL*QRCLAP
Trigger: TGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCC...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTCACTCAGAGTTGTCTaGTCCAGCCCCAGGCGTATG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLSLRVV*SSPRRM
Trigger: CATACGCCTGGGGCTGGACCAGACAACTCTGAGTGA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTGCAATCTCAGCAATTaGGAAGATCTTGCTCACGTC +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVCNLSN*EDLAHV
Trigger: GACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPHPAVL*VDLTQE
Trigger: TTCCTGGGTGAGATCAACCCACAGCACAGCTGGATG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTTAAAGTGGGCCATTTaGAACAGGGATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVLKWAI*NRDVST
Trigger: TGTGGACACATCCCTGTTCCAAATGGCCCACTTTAA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCAATGGAGCAGTCACTTaGGATCAGGTAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSNGAVT*DQVEVE
Trigger: TTCCACCTCTACCTGATCCCAAGTGACTGCTCCATT...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCACTATGGCCTTCCGAATaGAGCAGTCACTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSLWPSE*SSHLGS
Trigger: TGATCCCAAGTGACTGCTCCATTCGGAAGGCCATAG...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTTTCTAGATCATCTATaGCCTTCCGAATGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWFLDHL*PSEWSS
Trigger: ACTGCTCCATTCGGAAGGCCATAGATGATCTAGAAA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCAAGAGCTCCAGTTCCTTaGGGAGTATTTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSRAPVP*GVFPAS
Trigger: GGATGCTGGAAATACTCCCCAAGGAACTGGAGCTCT...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCAGGCATGAGATCTCCTaGTTTCACCAAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPRHEIS*FHQGLP
Trigger: TGGGAGGCCTTGGTGAAACCAGGAGATCTCATGCCT...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTACGGCTATGCGGGCTaGAGGGATCAGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLYGYAG*RDQSSC
Trigger: GCAACTACTCTGATCCCTCCAGCCCGCATAGCCGTA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTACGGCTATGCGGGCTaGAGGGATCAGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFYGYAG*RDQSSC
Trigger: GCAACTACTCTGATCCCTCCAGCCCGCATAGCCGTA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTACGGCTATGCGGGCTaGAGGGATCAGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSYGYAG*RDQSSC
Trigger: GCAACTACTCTGATCCCTCCAGCCCGCATAGCCGTA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAGCTGCTCTCGATACTaGTCCACAAAGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPSCSRY*STKCSN
Trigger: GTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTAACAGCTTCCGCATCTaGCTGGGCCTCGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFNSFRI*LGLVFS
Trigger: TGAGAACACGAGGCCCAGCCAGATGCGGAAGCTGTT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTTCCGGTCCCAGGACTaGCTCAAGCTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFFRSQD*LKLNSF
Trigger: GAAGCTGTTCAGCTTGAGCCAGTCCTGGGACCGGAA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTTCCGGTCCCAGGACTaGCTCAAGCTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSFRSQD*LKLNSF
Trigger: GAAGCTGTTCAGCTTGAGCCAGTCCTGGGACCGGAA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGAAGGCAAACCAGATaGCAACTTGTTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCGRQTR*QLVCRE
Trigger: TTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCC...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCCTGAGATCAACCCTTaGGCTGCAAGGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSPEINP*AARLRR
Trigger: TCTTCTCAGCCTTGCAGCTCAAGGGTTGATCTCAGG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAACTCGTCTTCTCTGGCTaGGCGGGTGTCTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQLVFSG*AGVSPE
Trigger: TTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAG...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACTACACCATCGAGGATaGAGAGCAGCCGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLHHRG*RAAALA
Trigger: GGCCAGAGCGGCTGCTCTTCATCCTCGATGGTGTAG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTTGGAAGTCAGTGTaGGTTTTTCCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGSWKSV*VFPSAS
Trigger: TGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTGAGAGCAGAGGTCTCTaGGCTGGGGTCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFESRGL*AGVPMA
Trigger: AGCCATTGGGACCCCAGCTCAGAGACCTCTGCTCTC...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCAAGAAGGTGGAGATaGTGGCCCCATCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRSRRWR*WPHLTH
Trigger: ATGGGTTAGATGGGGCCATCATCTCCACCTTCTTGA...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCTCAAGAAGGTGGAGATaGTGGCCCCATCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPSRRWR*WPHLTH
Trigger: ATGGGTTAGATGGGGCCATCATCTCCACCTTCTTGA...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSSLRLA*ATWEAA
Trigger: GGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCGGGGCATCCAGAGGTaGAGGTACGGCTATGCGGGC +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVRGIQR*RYGYAG
Trigger: GCCCGCATAGCCGTACCTTCACCTCTGGATGCCCCG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGAAGAGCTCCTGGAGTaGGCTTTATTGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFEELLE*ALLASR
Trigger: TCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATACGAGGCCACCTCCATaGCACTCGTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYTRPPP*HSSSLA
Trigger: AGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGT...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGACCTCAGCCCCATCTaGTCCCAGGTATGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPDLSPI*SQVWRA
Trigger: AGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTCCAGCTCCCCAGCACTaGTGTGGATGTGGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSPAPQH*CGCGGV
Trigger: AACGCCCCCACATCCACAGCAGTGCTGGGGAGCTGG...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGCGTTCCTACCACCGCTaGCCATGGGGGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETERSYHR*PWGPAF
Trigger: AAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGAACG...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGT +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLIPAAP*SMTMRG
Trigger: ACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAAT...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFIPAAP*SMTMRG
Trigger: ACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAAT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPSTQRA*SKEGMR
Trigger: CCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGA...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGCCTAAAGGCTCTAATTaGTTGCCTTTCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: HSSRSEPGQNEAILESPRPKGSN*LPFICE
Trigger: TTCACAGATGAAAGGCAAGCAATTAGAGCCTTTAGG...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFSFRFI*CIRQVQ
Trigger: CTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGGCTGCAGCAGCAGCTaGAGGGACGGGACCCACTGC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEGCSSS*RDGTHC
Trigger: GCAGTGGGTCCCGTCCCTGCAGCTGCTGCTGCAGCC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCTGATCCGAGTCTCTaGCGCTTGAGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSSDPSL*RLSEDV
Trigger: CACATCCTCACTCAAGCGGCAGAGACTCGGATCAGA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTCTGATCCGAGTCTCTaGCGCTTGAGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLSDPSL*RLSEDV
Trigger: CACATCCTCACTCAAGCGGCAGAGACTCGGATCAGA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTTCTTGTCTTTCACTTaGAGCCTGATCCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLFLSFT*SLIPDP
Trigger: GGGATCAGGGATCAGGCTGCAAGTGAAAGACAAGAA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCTTGTCTTTCACTTaGAGCCTGATCCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLFLSFT*SLIPDP
Trigger: GGGATCAGGGATCAGGCTGCAAGTGAAAGACAAGAA...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCTCAGCACCTGTCCATaGAGTTTGTCCAAGACAACC +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSLSTCP*SLSKTT
Trigger: GGTTGTCTTGGACAAACTGCATGGACAGGTGCTGAG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATGTGGTGACGGGAGATaGGGTGTGGGCAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPCGDGR*GVGNAH
Trigger: GTGAGCGTTGCCCACACCCCATCTCCCGTCACCACA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCATGCTGTCCTTTGCCTTaGCTCTTACCGTCTCTTATT +
Preference number: 4 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPCCPLP*LLPSLI
Trigger: AATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCA...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGGCCCCTTCCTGGGCTTaGGCGCACAGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVAPSWA*AHSDLS
Trigger: GCTGAGGTCACTGTGCGCCCAAGCCCAGGAAGGGGC...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTGGCTTGGAGACTCATaGTCTGGGGAGCTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFWLGDS*SGELGR
Trigger: TCTTCCAAGCTCCCCAGACCATGAGTCTCCAAGCCA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTTGGATGTGGGGGCGTTaGGTGACTCCTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGIWMWGR*VTPGLE
Trigger: CTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCA...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCTTCCTTCACCTGCCTaGCCAGTGTTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLLPSPA*PVLTSQ
Trigger: TTGGGAAGTCAACACTGGCCAGGCAGGTGAAGGAAG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCTGCAAGACCCATCCTaGCTCATCTACACCATCGAG +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSLQDPS*LIYTIE
Trigger: CTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCTGCAAGACCCATCCTaGCTCATCTACACCATCGAG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLLQDPS*LIYTIE
Trigger: CTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCTGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFCIRRL*LAPVQT
Trigger: TGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCA...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATGTAGCTCAGAGGGATaGGGTGCTCTTGAAGAATAC +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSCSSEG*GALEEY
Trigger: GTATTCTTCAAGAGCACCCCATCCCTCTGAGCTACA...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGGACTCCAGAGAGTGTaGCTGCAGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPGLQRV*LQQQLQ
Trigger: CTGCAGCTGCTGCTGCAGCCACACTCTCTGGAGTCC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGGCTGTCTCAGTCTCTaGCAAAGGTGTTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFGCLSL*QRCLAP
Trigger: TGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTCACCGGTACTACCTCTaGGGAGCTTTCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIHRYYL*GAFLVA
Trigger: AGCCACGAGGAAAGCTCCCCAGAGGTAGTACCGGTG...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCATCTCACCCAGGAACTaGTCCCACACACAGAATTCA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPISPRN*SHTQNS
Trigger: TGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGAT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATGGAGCAGTCACTTaGGATCAGGTAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPNGAVT*DQVEVE
Trigger: TTCCACCTCTACCTGATCCCAAGTGACTGCTCCATT...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCACCGGTACTACCTCTaGGGAGCTTTCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSHRYYL*GAFLCN
Trigger: ATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTAGGCATGAGATCTCCTaGTTTCACCAAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFRHEIS*FHQGLP
Trigger: TGGGAGGCCTTGGTGAAACCAGGAGATCTCATGCCT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGACTGGGGCCCCCTGTaGCATCCCTGGCATGGACAC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLDWGPL*HPWHGH
Trigger: GTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCTTGCCAGCTCCAGATaGACATTCCCTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFLASSR*TFPEML
Trigger: CAGCATCTCAGGGAATGTCCATCTGGAGCTGGCAAG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAACGCTGCTCCCCATACTaGGCCACCAGGTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQRCSPY*ATRYEA
Trigger: GGCCTCGTACCTGGTGGCTCAGTATGGGGAGCAGCG...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACGCTGCTCCCCATACTaGGCCACCAGGTACGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKERCSPY*ATRYEA
Trigger: GGCCTCGTACCTGGTGGCTCAGTATGGGGAGCAGCG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAATGGGCTGTAGGGGAATaGGGGAGAGTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEWAVGE*GRVACP
Trigger: GGGGCAGGCCACTCTCCCTCATTCCCCTACAGCCCA...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPQPPAV*LCEVLG
Trigger: CCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAACAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQQPPAV*LCEVLG
Trigger: CCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTG...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAACTGTGGTCCGAGCCGTaGTCAGGAAGGATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PQKQASSLLSISHMIKNKLWSEP*SGRMPR
Trigger: CCGAGGCATCCTTCCTGATCACGGCTCGGACCACAG...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTCTGCCCTCAATCAGCTaGAGCTTCTTCACGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCILPSIS*SFFTWR
Trigger: CCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAG...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTGCAGTCCTCAGCTGTaGGGCCACAGCCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLCSPQL*GHSQPT
Trigger: GGTTGGCTGGCTGTGGCCTCACAGCTGAGGACTGCA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACCAGCCCCAGGCGTATaGGTTTGCAGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRPAPGV*VCRQDA
Trigger: GGCATCCTGCCTGCAAACTCATACGCCTGGGGCTGG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCCAGCCCCAGGCGTATaGGTTTGCAGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVPAPGV*VCRQDA
Trigger: GGCATCCTGCCTGCAAACTCATACGCCTGGGGCTGG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTTTTCCAGAACTATGTaGTGCAGCTCCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSFSRTM*CSSTLA
Trigger: AGCCAGGGTGGAGCTGCATCACATAGTTCTGGAAAA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTAGTTCCATAATGAGGTaGGGATGGGTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLSSIMR*GWVSFR
Trigger: CCTGAAGGAGACCCATCCTCACCTCATTATGGAACT...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGCTGTGGCCACCAGATaGGGCTCTATGAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPAVATR*GSMRSA
Trigger: TGCAGACCTCATAGAGCCTCATCTGGTGGCCACAGC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATTGGGGCTCACCCTGTaGCACAGCCAGAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLGLTL*HSQRQM
Trigger: CATTTGCCTCTGGCTGTGTCACAGGGTGAGCCCCAA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAAGTCCCAGGAGCCTCCTaGTCTCTGGGTGCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PQKQASSLLSISHMIKNKVPGAS*SLGARL
Trigger: CAGCCTAGCACCCAGAGAGCAGGAGGCTCCTGGGAC...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGGCTGTAGGCTGGTGTaGGCCTGTGGGGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEGCRLV*ACGGVP
Trigger: AGGAACGCCCCCACAGGCGCACACCAGCCTACAGCC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACAAACTGCCCAGCAGTaGATCCGCCGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRQTAQQ*IRRLWL
Trigger: CAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGCAAGACATAGGACATTaGTGCAAAGAACTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ASPKPISQTHLRSTQASLQDIGH*CKELLE
Trigger: TTCCAAGAGTTCTTTGCAGCAATGTCCTATGTCTTG...CAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTTGATCTGTGCTGCCTaGCCTCAATCAGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSLICAA*PQSAEA
Trigger: AGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTGCCACCATCCAGCTGTaGTGTGGGTTGATCTCACCC +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIATIQL*CGLISP
Trigger: GGGTGAGATCAACCCACAGCACAGCTGGATGGTGGC...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCTCTGTCTCTCCATCTaGATCTGTATGTGTACAACC +
Preference number: 4 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHLCLSI*ICMCTT
Trigger: GGTTGTACACATACAGATGCAGATGGAGAGACAGAG...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGGAGCCCCGGGCTGCTaGCTCCCAGGTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRGAPGC*LPGFFR
Trigger: TCTGAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCC...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACCCTCTCCTGGGTCCTaGACTCCTGAGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPPSPGS*TPEINP
Trigger: AGGGTTGATCTCAGGAGTCCAGGACCCAGGAGAGGG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACTGATAGGGAGGTCCTaGGATGGGGTCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRLIGRS*DGVQGQ
Trigger: CTGGCCCTGGACCCCATCCCAGGACCTCCCTATCAG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTGCTGTCCTTTGCCTTaGCTCTTACCGTCTCTTATT +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPCCPLP*LLPSLI
Trigger: AATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTGGAGTGCGCTTTATTaGCGAGCAGAAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFWSALY*RAEAGT
Trigger: AGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTGCCCCTTCCTGGGCTTaGGCGCACAGTGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTAAPSWA*AHSDLS
Trigger: GCTGAGGTCACTGTGCGCCCAAGCCCAGGAAGGGGC...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGGGGAATGAGGGAGAGTaGCCTGCCCCTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVGNEGE*PAPSWA
Trigger: AGCCCAGGAAGGGGCAGGCCACTCTCCCTCATTCCC...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGCGTTGGGTGACTCCTaGCTTGGAGACTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYALGDS*LGDSWS
Trigger: AGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGC...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGGCACTGCTGTGGATGTaGGGGCGTTGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEALLWM*GRWVTP
Trigger: AGGAGTCACCCAACGCCCCCACATCCACAGCAGTGC...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTTTTCCAGGGCCATGTaGAACAGAGGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLFSRAM*NRGSLS
Trigger: TGAGAGAGAGCCTCTGTTCCACATGGCCCTGGAAAA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTCGAGACTCACCACCTTaGACTGGGCCAGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSRDSPP*TGPALC
Trigger: GCAGAGAGCTGGCCCAGTCCAAGGTGGTGAGTCTCG...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLCIRRL*LAPVQT
Trigger: TGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGGAGCTGGGGTCCCAATaGCTGAGCTTGGAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEELGSQ*LSLESL
Trigger: CAGGCTCTCCAAGCTCAGCCATTGGGACCCCAGCTC...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCGGACTCCAGAGAGTGTaGCTGCAGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFGLQRV*LQQQLQ
Trigger: CTGCAGCTGCTGCTGCAGCCACACTCTCTGGAGTCC...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTACAGGACTACCATGGTaGGGCTCCATGTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSTGLPW*GSMLIC
Trigger: ACAGATCAACATGGAGCCCCACCATGGTAGTCCTGT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCAGGGGTCATCACACTTaGTTTCCGTCTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPRGHHT*FPSAED
Trigger: ATCTTCAGCAGACGGAAACCAAGTGTGATGACCCCT...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTGCAATCTCAGCAATTaGGAAGATCTTGCTCACGTC +
Preference number: 4 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPCNLSN*EDLAHV
Trigger: GACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCA...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGGGGAGCTTTCCTCGTaGCTCTTGCCTGCAATCTCA +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYGELSS*LLPAIS
Trigger: TGAGATTGCAGGCAAGAGCCACGAGGAAAGCTCCCC...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAAAGCAGAGACCCGTGTTaGGCCAGCGGTAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQKQASSLLSISHMIKNKSRDPC*ASGRSQ
Trigger: CTGGCTCCTACCGCTGGCCCAACACGGGTCTCTGCT...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTAGGGATGTGTCCACATaGCCCCCTTGGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFRDVST*PPWRAT
Trigger: TGTGGCTCTCCAAGGGGGCCATGTGGACACATCCCT...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCAATGGAGCAGTCACTTaGGATCAGGTAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSNGAVT*DQVEVE
Trigger: TTCCACCTCTACCTGATCCCAAGTGACTGCTCCATT...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCTTTCTAGATCATCTATaGCCTTCCGAATGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSFLDHL*PSEWSS
Trigger: ACTGCTCCATTCGGAAGGCCATAGATGATCTAGAAA...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAATGGATTCGCACAAACTaGAATTTCATTTCTAGATCA +
Preference number: 4 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQWIRTN*NFISRS
Trigger: TGATCTAGAAATGAAATTCCAGTTTGTGCGAATCCA...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCACAGCCAGAGGCAAATaGTTCCATGTCCCTCCTATT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPTARGK*FHVPPI
Trigger: AATAGGAGGGACATGGAACCATTTGCCTCTGGCTGT...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTCGTCTTCTCTGGCTaGGCGGGTGTCTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVLVFSG*AGVSPE
Trigger: TTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGCTGCCTGGCCAGTGTTaGCTTCCCAATTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETELPGQC*LPNSSS
Trigger: GCTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAG...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACTACACCATCGAGGATaGAGAGCAGCCGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRLHHRG*RAAALA
Trigger: GGCCAGAGCGGCTGCTCTTCATCCTCGATGGTGTAG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIRVSAA*VRMCYY
Trigger: GTAATAGCACATCCTCACTCAAGCGGCAGAGACTCG...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAAGCTGTGCTGTGGGTTaGTCTCACCCAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPSCAVG*SHPGTG
Trigger: ACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCT...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCTTTTCCAGAACTATGTaGTGCAGCTCCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSFSRTM*CSSTLA
Trigger: AGCCAGGGTGGAGCTGCATCACATAGTTCTGGAAAA...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATTGCAGCCTGATCCCTaGTCCCAAGTGGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLQPDP*SQVANV
Trigger: TACGTTGGCCACTTGGGATCAGGGATCAGGCTGCAA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLSLSPG*TPPAIH
Trigger: ATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCAT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNSLSPG*TPPAIH
Trigger: ATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGA...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPSELGS*KTHPGS
Trigger: TGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGTTTTCCCCAGCAAACTaGCCAGCAGTGCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEFSPAN*PAVHPP
Trigger: CGGCGGATGCACTGCTGGGCAGTTTGCTGGGGAAAA...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCCTAAAGGCTCTAATTaGTTGCCTTTCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGPKGSN*LPFICE
Trigger: TTCACAGATGAAAGGCAAGCAATTAGAGCCTTTAGG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCTGTTTCTACACACATaGCCATTTCTTCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLLFLHT*PFLRNG
Trigger: CCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATTCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYSRLFC*RSSSFR
Trigger: CCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGA...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELVQQRP*HHPAVL
Trigger: CAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGAC...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTTCTTGTCTTTCACTTaGAGCCTGATCCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLFLSFT*SLIPDP
Trigger: GGGATCAGGGATCAGGCTGCAAGTGAAAGACAAGAA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGCAGCTCAAGAATTGGTaGATTTCTCTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QILQRPASPKPISQTHLRQLKNW*ISLPSS
Trigger: GGAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTG...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTGGGGAGCTTTCCTCTaGAATCTCAGCAATTGGGAA +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSWGAFL*NLSNWE
Trigger: TTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGTCTGCAGGGGTCTTaGCAGCTCCAGATGGACATT +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGLQGS*QLQMDI
Trigger: AATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETERLYEV*RGLASS
Trigger: GGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACCTCCTATTCCTCTTTaGGCCTGGATGGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPPPIPL*AWMGSG
Trigger: TCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGCCACTCGTCTTCTCTaGCTGAGCGGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLATRLL*LSGCLT
Trigger: GGTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGATCTGCTCCCAGGTATaGAGGGCTAGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVICSQV*RARSQA
Trigger: GGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGAT...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGCACTGCTGTGGATGTaGGGGCGTTGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLALLWM*GRWVTP
Trigger: AGGAGTCACCCAACGCCCCCACATCCACAGCAGTGC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGAAGAGCAGCCGCTCTaGCCTAGACAGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPEEQPL*PRQDLS
Trigger: AGACAGATCCTGTCTAGGCCAGAGCGGCTGCTCTTC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAATGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKECIRRL*LAPVQT
Trigger: TGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCA...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCACTTCCTGAGGTCATCTaGACTGAAAAGGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSLPEVI*TEKGLF
Trigger: AAAAAGACCCTTTTCAGTCCAGATGACCTCAGGAAG...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTCGGTCAGGGTCTGGTTaGCTCTCAGCCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSRSGSG*LSAQRQ
Trigger: TTGCCTTTGGGCTGAGAGCCAACCAGACCCTGACCG...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAACAGAGGCCAGGTCCTaGCAGCAGTCAGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRTEARS*QQSDVR
Trigger: CCTCACGTCTGACTGCTGCCAGGACCTGGCCTCTGT...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAGGGATGTGTCCACATaGCCCCCTTGGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETERDVST*PPWRAT
Trigger: TGTGGCTCTCCAAGGGGGCCATGTGGACACATCCCT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCAAGCGCAGGGCATTATaGATCATTTTCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSKRRAL*IIFRRT
Trigger: AGTCCTCCTGAAAATGATCCATAATGCCCTGCGCTT...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATTTCTAGATCATCTATaGCCTTCCGAATGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SPKPISQTHLRSTQASLSFLDHL*PSEWSS
Trigger: ACTGCTCCATTCGGAAGGCCATAGATGATCTAGAAA...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAACAGCCCATATAAAGTaGGGTCAGCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPTAHIK*GQRGWL
Trigger: AAGCCACCCCCGCTGACCCCACTTTATATGGGCTGT...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR TCA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATGGGTCCTGGACTCCTaGGATCAACCCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PQKQASSLLSISHMIKNKWVLDS*DQPLSC
Trigger: GCAGCTCAAGGGTTGATCTCAGGAGTCCAGGACCCA...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACAGGCCAGCTTCTCTTaGCCAGGGGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRQASFS*PGDLGF
Trigger: GAAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCAGCTGTGCTGTGGGTTaGTCTCACCCAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFSCAVG*SHPGTG
Trigger: ACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCT...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGATGGAGAGCCACAAAGTaGGGGAGGTGCACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRWRATK*GRCTAS
Trigger: GGAAGCTGTGCACCTCCCTCACTTTGTGGCTCTCCA...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAACAGATGGACATTCCCTaGGATGCTGTTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQQMDIP*DAVRPP
Trigger: AGGTGGCCTAACAGCATCTCAGGGAATGTCCATCTG...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACCAGATGAGGCTCTATaGGGTCTGCAGGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRPDEAL*GLQGSC
Trigger: GCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTGAAGAGCTCCTGGAGTaGGCTTTATTGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGIEELLE*ALLASR
Trigger: TCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTC...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAACGAGGCCACCTCCATaGCACTCGTCTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRTRPPP*HSSSLA
Trigger: AGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGT...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPSFRFI*CIRQVQ
Trigger: CTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTGCCCCATCTAACCCATaGTTCCTGAGGTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFAPSNP*FLRSSG
Trigger: TCCAGATGACCTCAGGAAGCATGGGTTAGATGGGGC...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGCCCCATCTAACCCATaGTTCCTGAGGTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPAPSNP*FLRSSG
Trigger: TCCAGATGACCTCAGGAAGCATGGGTTAGATGGGGC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGCCACCATCCAGCTGTaGTGTGGGTTGATCTCACCC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLATIQL*CGLISP
Trigger: GGGTGAGATCAACCCACAGCACAGCTGGATGGTGGC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTGAAGGTACGGCTATaGGGGCTGGAGGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLVKVRL*GLEGSE
Trigger: CTCTGATCCCTCCAGCCCGCATAGCCGTACCTTCAC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAACTCGGGCTATCAGCTaGTCTCGATACTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPTRAIS*SRYWST
Trigger: TGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGT...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGAGTCCCTTTTTGCTaGCCTTCTCCCAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGVPFC*PSPRVP
Trigger: TGGAACTCTGGGAGAAGGGCAGCAAAAAGGGACTCC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGCAGGAGTCCCTTTTTaGTGCCCTTCTCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPAGVPF*CPSPRV
Trigger: AACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACAGGCTCTATGAGGTCTaGAGGGGTCTTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNRLYEV*RGLASS
Trigger: GGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACCCCTCTCCTGGGTCCTaGACTCCTGAGATCAACCCT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNPSPGS*TPEINP
Trigger: AGGGTTGATCTCAGGAGTCCAGGACCCAGGAGAGGG...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGGCCTGCAAGACACTaGAAGAAGTCAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGPARH*KKSADR
Trigger: CCTATCAGCTGACTTCTTCCAGTGTCTTGCAGGCCC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATGCCACTCGTCTTCTCTaGCTGAGCGGGTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNATRLL*LSGCLT
Trigger: GGTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGC...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGCATTAGCACTGCGGTaGAGGTGGGTTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEALALR*RWVGWE
Trigger: CTCCCAGCCAACCCACCTCCACCGCAGTGCTAATGC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTGCACTGCTGTGGATGTaGGGGCGTTGGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTAALLWM*GRWVTP
Trigger: AGGAGTCACCCAACGCCCCCACATCCACAGCAGTGC...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTCTGCAAGACCCATCCTaGCTCATCTACACCATCGAG +
Preference number: 4 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGILQDPS*LIYTIE
Trigger: CTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAG...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTTCCTGAGGTCATCTaGACTGAAAAGGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPLPEVI*TEKGLF
Trigger: AAAAAGACCCTTTTCAGTCCAGATGACCTCAGGAAG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATCTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYLFTAE*LSEFPL
Trigger: AAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAG...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCGGTCAGGGTCTGGTTaGCTCTCAGCCCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVRSGSG*LSAQRQ
Trigger: TTGCCTTTGGGCTGAGAGCCAACCAGACCCTGACCG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAAGGGATGTGTCCACATaGCCCCCTTGGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRRDVST*PPWRAT
Trigger: TGTGGCTCTCCAAGGGGGCCATGTGGACACATCCCT...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTTAAAGTGGGCCATTTaGAACAGGGATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFLKWAI*NRDVST
Trigger: TGTGGACACATCCCTGTTCCAAATGGCCCACTTTAA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTGGATTCGCACAAACTaGAATTTCATTTCTAGATCA +
Preference number: 4 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVWIRTN*NFISRS
Trigger: TGATCTAGAAATGAAATTCCAGTTTGTGCGAATCCA...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTAGCGGGGGTGGCTTGTaGATTCGCACAAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFSGGGL*IRTNWN
Trigger: ATTCCAGTTTGTGCGAATCCACAAGCCACCCCCGCT...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCACAGCCCATATAAAGTaGGGTCAGCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFTAHIK*GQRGWL
Trigger: AAGCCACCCCCGCTGACCCCACTTTATATGGGCTGT...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAACAGCTTCCGCATCTaGCTGGGCCTCGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETENSFRI*LGLVFS
Trigger: TGAGAACACGAGGCCCAGCCAGATGCGGAAGCTGTT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCCCCTGTGGCATCCCTaGCATGGACACATAATGCCC +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVPLWHP*HGHIMP
Trigger: GGGCATTATGTGTCCATGCCAGGGATGCCACAGGGG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGATTCCTCTTTGCGCCTaGATGGGATCCGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVIPLCA*MGSGGL
Trigger: GAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAAT...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAAGCTTGGTAGAGGAGTaGGGCAGAGATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQSLVEE*GRDFSP
Trigger: TGGAGAGAAATCTCTGCCTCACTCCTCTACCAAGCT...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGCAGGCCAGCTTCTCTTaGCCAGGGGATCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELQASFS*PGDLGF
Trigger: GAAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTG...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGCAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELQPPAV*LCEVLG
Trigger: CCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTG...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCTGCCTGGCCAGTGTTaGCTTCCCAATTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTALPGQC*LPNSSS
Trigger: GCTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAG...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTAGCTGTGCTGTGGGTTaGTCTCACCCAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLSCAVG*SHPGTG
Trigger: ACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCT...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATTTTCCAGAACTATGTaGTGCAGCTCCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPFSRTM*CSSTLA
Trigger: AGCCAGGGTGGAGCTGCATCACATAGTTCTGGAAAA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGGGTAGAGGTGGAAGGTaGCTTCCTCAGGATGGACGC +
Preference number: 4 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLGRGGR*LPQDGR
Trigger: GCGTCCATCCTGAGGAAGTCACCTTCCACCTCTACC...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGATTGCAGCCTGATCCCTaGTCCCAAGTGGCCAACGTA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRLQPDP*SQVANV
Trigger: TACGTTGGCCACTTGGGATCAGGGATCAGGCTGCAA...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACCAGGCTTCCTTCACCTaGCTGGCCAGTGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNQASFT*LASVDF
Trigger: GAAGTCAACACTGGCCAGGCAGGTGAAGGAAGCCTG...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAATTTTCCCCAGCAAACTaGCCAGCAGTGCATCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQFSPAN*PAVHPP
Trigger: CGGCGGATGCACTGCTGGGCAGTTTGCTGGGGAAAA...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGAAGGAATGAGGTTCTaGAGAGCTGTGGTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLEGMRF*RAVVRA
Trigger: GGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTTCCGCTTCATCTGCTaGATCAGGCAAGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLFRFIC*IRQVQA
Trigger: GGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGATCAGGTGGTTTTCCCGCACGAACTCTTGTCAATGAGAAATCCCTCAGCCCCGACATAGGACATTGCTaGAAAGAACTCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: GSGGFPARTLVNEKSLSPDIGHC*KELLET
Trigger: TGTTTCCAAGAGTTCTTTGCAGCAATGTCCTATGTC...GGGGCTGAGGGATTTCTCATTGACAAGAGTTCGTGCGGGAAAACCACCTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATTGATCTGTGCTGCCTaGCCTCAATCAGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLICAA*PQSAEA
Trigger: AGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGGCAGTCGCTGTAGCTTaGAGCTCGGCTGTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLAVAVA*SSAVSV
Trigger: GACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGC...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAGGGCCCTCAGTTCCTaGCTCATCTCATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETERALSS*LISSLR
Trigger: TCTGAGTGATGAGATGAGGCAGGAACTGAGGGCCCT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGCCACCATCCAGCTGTaGTGTGGGTTGATCTCACCC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEATIQL*CGLISP
Trigger: GGGTGAGATCAACCCACAGCACAGCTGGATGGTGGC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTACTGGTCCACAAAGTaGAGCAACTGCGGGGCATCC +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNYWSTK*SNCGAS
Trigger: GGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTA...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCCTCCTATTCCTCTTTaGGCCTGGATGGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVPPIPL*AWMGSG
Trigger: TCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTGTGCTGTCCTTTGCCTTaGCTCTTACCGTCTCTTATT +
Preference number: 4 (lower is better)
Translates to: SMRNPSAPFVLGLTAPEVCCPLP*LLPSLI
Trigger: AATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCA...CACTTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGGGATCTTGGCTTCTaGGGTGAGGTCTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGDLGF*GEVFVE
Trigger: TTCTACAAAGACCTCACCCCAGAAGCCAAGATCCCC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCTTCCTGAGGTCATCTaGACTGAAAAGGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLLPEVI*TEKGLF
Trigger: AAAAAGACCCTTTTCAGTCCAGATGACCTCAGGAAG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLFTAE*LSEFPL
Trigger: AAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAGGGGTCATCACACTTaGTTTCCGTCTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIRGHHT*FPSAED
Trigger: ATCTTCAGCAGACGGAAACCAAGTGTGATGACCCCT...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAACTGAGGTTCCACGGCTaGCTGGTGTTCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQLRFHG*LVFLPG
Trigger: ACCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAG...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCAGCTTGGTAGAGGAGTaGGGCAGAGATTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFSLVEE*GRDFSP
Trigger: TGGAGAGAAATCTCTGCCTCACTCCTCTACCAAGCT...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTCCAGAGCTCTTTGTTTaGTTTGACCAACCTAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALHPQKQASSLLSISHMIPELFV*FDQPKG
Trigger: GCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGG...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLRVSAA*VRMCYY
Trigger: GTAATAGCACATCCTCACTCAAGCGGCAGAGACTCG...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAGAGCTCCTGGAGTaGGCTTTATTGGCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCREELLE*ALLASR
Trigger: TCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTC...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGT +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVIPAAP*SMTMRG
Trigger: ACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAAT...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACAGGCTTCCTTCACCTaGCTGGCCAGTGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEQASFT*LASVDF
Trigger: GAAGTCAACACTGGCCAGGCAGGTGAAGGAAGCCTG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTGCCTTCTTCTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGG +
Preference number: 4 (lower is better)
Translates to: PRSRDNTAQELVHFSAFFSTQRA*SKEGMR
Trigger: CCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGA...GAAGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCCTAAAGGCTCTAATTaGTTGCCTTTCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFPKGSN*LPFICE
Trigger: TTCACAGATGAAAGGCAAGCAATTAGAGCCTTTAGG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGGCCCCATCTAACCCATaGTTCCTGAGGTCATCTGGA +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVAPSNP*FLRSSG
Trigger: TCCAGATGACCTCAGGAAGCATGGGTTAGATGGGGC...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTGACATAGGACATTGCTaGAAAGAACTCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSDIGHC*KELLET
Trigger: TGTTTCCAAGAGTTCTTTGCAGCAATGTCCTATGTC...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAACAAAGACTCTTCACTaGAGAGTGGCTCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPTKTLH*RVAQRV
Trigger: AACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGT...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLSRLFC*RSSSFR
Trigger: CCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATGGGGAGCTTTCCTCTaGAATCTCAGCAATTGGGAA +
Preference number: 4 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPWGAFL*NLSNWE
Trigger: TTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACGGTAGAGTCCATCTTTaGACTTCCGGTCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNGRVHL*TSGPRT
Trigger: AGTCCTGGGACCGGAAGTGCAAAGATGGACTCTACC...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEHPKSS*SALYWR
Trigger: TCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCATTAGCACTGCGGTaGAGGTGGGTTGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTALALR*RWVGWE
Trigger: CTCCCAGCCAACCCACCTCCACCGCAGTGCTAATGC...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACT +
Preference number: 4 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTAPAGNS*IQGIST
Trigger: AGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGG...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTGGAGACTCATGGTCTaGGGAGCTTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLWRLMV*GAWKSL
Trigger: CAAGCTCTTCCAAGCTCCCCAGACCATGAGTCTCCA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGTGGAGACTCATGGTCTaGGGAGCTTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVWRLMV*GAWKSL
Trigger: CAAGCTCTTCCAAGCTCCCCAGACCATGAGTCTCCA...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACTTCCTTCACCTGCCTaGCCAGTGTTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRLPSPA*PVLTSQ
Trigger: TTGGGAAGTCAACACTGGCCAGGCAGGTGAAGGAAG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGAAGAGCAGCCGCTCTaGCCTAGACAGGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEEEQPL*PRQDLS
Trigger: AGACAGATCCTGTCTAGGCCAGAGCGGCTGCTCTTC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAATGTAGCTCAGAGGGATaGGGTGCTCTTGAAGAATAC +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQCSSEG*GALEEY
Trigger: GTATTCTTCAAGAGCACCCCATCCCTCTGAGCTACA...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACGTCTCGTACAAGCAGTaGAGGGACTCCAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNVSYKQ*RDSREC
Trigger: ACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGAC...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAGCCTTTTCCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RWPVGKYLAKVVPGIKPFPISSK*AITCVR
Trigger: CCTGACACAAGTGATGGCCCATTTCGAAGAAATGGG...AAAAGGCTTAATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACAGGACTACCATGGTaGGGCTCCATGTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETETGLPW*GSMLIC
Trigger: ACAGATCAACATGGAGCCCCACCATGGTAGTCCTGT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGGCTGTCTCAGTCTCTaGCAAAGGTGTTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLGCLSL*QRCLAP
Trigger: TGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAAGGGGTCATCACACTTaGTTTCCGTCTGCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQRGHHT*FPSAED
Trigger: ATCTTCAGCAGACGGAAACCAAGTGTGATGACCCCT...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATTTAAAGTGGGCCATTTaGAACAGGGATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYLKWAI*NRDVST
Trigger: TGTGGACACATCCCTGTTCCAAATGGCCCACTTTAA...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATGCTGGTGTTCCTTCCTaGTTTCACCAAGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNAGVPS*FHQGLP
Trigger: TGGGAGGCCTTGGTGAAACCAGGAAGGAACACCAGC...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAGCTGCTCTCGATACTaGTCCACAAAGTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETESCSRY*STKCSN
Trigger: GTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATCCAGCTCTCTGCAGCTaGAGTAGAAGACATGCTGGA +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNPALCS*SRRHAG
Trigger: TCCAGCATGTCTTCTACTTCAGCTGCAGAGAGCTGG...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTTCTTGGAAGTCAGTGTaGGTTTTTCCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGISWKSV*VFPSAS
Trigger: TGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGA...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR TCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQSLRLA*ATWEAA
Trigger: GGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACT...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGGATCAACCCTTGAGCTaGAAGGCTGAGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLDQPLS*KAEKRW
Trigger: CCACCTCTTCTCAGCCTTGCAGCTCAAGGGTTGATC...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGT +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELIPAAP*SMTMRG
Trigger: ACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAAT...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTTGATCTGTGCTGCCTaGCCTCAATCAGCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNLICAA*PQSAEA
Trigger: AGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAA...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACTCCATGTTGATCTGTaGTGCCTGCCCTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKELHVDL*CLPSIS
Trigger: GCTGATTGAGGGCAGGCAGCACAGATCAACATGGAG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACAAAGACTCTTCACTaGAGAGTGGCTCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETETKTLH*RVAQRV
Trigger: AACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTCTCAGCACCTGTCCATaGAGTTTGTCCAAGACAACC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLLSTCP*SLSKTT
Trigger: GGTTGTCTTGGACAAACTGCATGGACAGGTGCTGAG...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTGGGCCTGCAAGACACTaGAAGAAGTCAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTAGPARH*KKSADR
Trigger: CCTATCAGCTGACTTCTTCCAGTGTCTTGCAGGCCC...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGGGCCTGCAAGACACTaGAAGAAGTCAGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEGPARH*KKSADR
Trigger: CCTATCAGCTGACTTCTTCCAGTGTCTTGCAGGCCC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGATTTTCCAGGGCCATGTaGAACAGAGGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRFSRAM*NRGSLS
Trigger: TGAGAGAGAGCCTCTGTTCCACATGGCCCTGGAAAA...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACTTCCTTCACCTGCCTaGCCAGTGTTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKELPSPA*PVLTSQ
Trigger: TTGGGAAGTCAACACTGGCCAGGCAGGTGAAGGAAG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLPIGNV*LMPQTG
Trigger: GCCTGTTTGGGGCATCAACCACACGTTTCCTATTGG...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACACAGGACTACCATGGTaGGGCTCCATGTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNTGLPW*GSMLIC
Trigger: ACAGATCAACATGGAGCCCCACCATGGTAGTCCTGT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTAATGGAGCAGTCACTTaGGATCAGGTAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSNGAVT*DQVEVE
Trigger: TTCCACCTCTACCTGATCCCAAGTGACTGCTCCATT...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGAGCGGGGGTGGCTTGTaGATTCGCACAAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELSGGGL*IRTNWN
Trigger: ATTCCAGTTTGTGCGAATCCACAAGCCACCCCCGCT...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGAACTCCGAGAACAGCTaGTCTTCTCCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELNSENS*SSPGLR
Trigger: TCGAAGCCCTGGAGAAGACCAGCTGTTCTCGGAGTT...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACACCTCTCTGGCTTCATTaGTACTGCCGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTPLWLH*YCRRLL
Trigger: CAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGG...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACACCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGC +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTPPSPL*LHWYCR
Trigger: GCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGG...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACCAGTTCCTTCCGAATaGAGCAGTCACTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRPVPSE*SSHLGS
Trigger: TGATCCCAAGTGACTGCTCCATTCGGAAGGAACTGG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269280.8
ENST00000571451.6
CDS-3UTR CCA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAGGAAGGCAAACCAGATaGCAACTTGTTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LEGKPDGNLFAEKETETQGRQTR*QLVCRE
Trigger: TTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCC...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGTGGCATCCCTGGCATaGACACATAATGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEVASLA*THNAQQ
Trigger: TTGCTGGGCATTATGTGTCCATGCCAGGGATGCCAC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGATCTCTGCCGCTTGAGTaGGGATGTGCTATTACTCAT +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRSLPLE*GCAITH
Trigger: ATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGA...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTTTTTCCAGAACTATGTaGTGCAGCTCCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTAFSRTM*CSSTLA
Trigger: AGCCAGGGTGGAGCTGCATCACATAGTTCTGGAAAA...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGAACAGTGCTGTCCTTTaGCTTGGCTCTTACCGTCTC +
Preference number: 4 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLNSAVL*LGSYRL
Trigger: GAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTT...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACATTCCGCTTCATCTGCTaGATCAGGCAAGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTFRFIC*IRQVQA
Trigger: GGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAA...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAATCATCCAGGTTGTTCTaGTGCAGGTCTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQSSRLF*CRSSSF
Trigger: GAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGA...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAATCATCCAGGTTGTTCTaGTGCAGGTCTAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKESSRLF*CRSSSF
Trigger: GAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGA...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTTCTTGTCTTTCACTTaGAGCCTGATCCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNFLSFT*SLIPDP
Trigger: GGGATCAGGGATCAGGCTGCAAGTGAAAGACAAGAA...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGTGGGGAGCTTTCCTCTaGAATCTCAGCAATTGGGAA +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVWGAFL*NLSNWE
Trigger: TTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCA...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAATGGAGTGCGCTTTATTaGCGAGCAGAAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEWSALY*RAEAGT
Trigger: AGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCA...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTCCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLPISSK*AITCVR
Trigger: CCTGACACAAGTGATGGCCCATTTCGAAGAAATGGG...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACCCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNPISSK*AITCVR
Trigger: CCTGACACAAGTGATGGCCCATTTCGAAGAAATGGG...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGTGCAATCTCAGCAATTaGGAAGATCTTGCTCACGTC +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETECNLSN*EDLAHV
Trigger: GACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCA...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAATCTCACCCAGGAACTaGTCCCACACACAGAATTCA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRISPRN*SHTQNS
Trigger: TGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGAT...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAAGCGCAGGGCATTATaGATCATTTTCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEKRRAL*IIFRRT
Trigger: AGTCCTCCTGAAAATGATCCATAATGCCCTGCGCTT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACACAGCCAGAGGCAAATaGTTCCATGTCCCTCCTATT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNTARGK*FHVPPI
Trigger: AATAGGAGGGACATGGAACCATTTGCCTCTGGCTGT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
3UTR CAA 72 bp CTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTaGAGCATCTCGCATATGATTAAGAACAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: LALHPQKQASSL*SISHMIKNKSF
Trigger: GAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGTGTAGTAAATTCCTaGCGTTTCATCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNCVVNS*RFIQRP
Trigger: TGGCCTCTGGATGAAACGTCAGGAATTTACTACACA...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTTGTGTAGTAAATTCCTaGCGTTTCATCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLCVVNS*RFIQRP
Trigger: TGGCCTCTGGATGAAACGTCAGGAATTTACTACACA...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGTCTTGGAAGTCAGTGTaGGTTTTTCCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVSWKSV*VFPSAS
Trigger: TGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGA...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR TCA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGTCTCTGCCGCTTGAGTaGGGATGTGCTATTACTCAT +
Preference number: 4 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLSLPLE*GCAITH
Trigger: ATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGA...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGCTGTTTCTACACACATaGCCATTTCTTCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETELFLHT*PFLRNG
Trigger: CCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAG...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACACTGCAAGACCCATCCTaGCTCATCTACACCATCGAG +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTLQDPS*LIYTIE
Trigger: CTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAG...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEPISSK*AITCVR
Trigger: CCTGACACAAGTGATGGCCCATTTCGAAGAAATGGG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAATAGGCATCTGTGACTaGGACCCACCTGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTIGICD*DPPEQD
Trigger: GTCCTGTTCAGGTGGGTCCCAGTCACAGATGCCTAT...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATATCTCACCCAGGAACTaGTCCCACACACAGAATTCA +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNISPRN*SHTQNS
Trigger: TGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGAT...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGATTAAAGTGGGCCATTTaGAACAGGGATGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRLKWAI*NRDVST
Trigger: TGTGGACACATCCCTGTTCCAAATGGCCCACTTTAA...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACAAGCGCAGGGCATTATaGATCATTTTCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNKRRAL*IIFRRT
Trigger: AGTCCTCCTGAAAATGATCCATAATGCCCTGCGCTT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTATACAGCTCAAGAATTaGTGCATTTCTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIIQLKN*CISLPS
Trigger: AGAAGGCAGAGAAATGCACCAATTCTTGAGCTGTAT...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATTGTGTAGTAAATTCCTaGCGTTTCATCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNCVVNS*RFIQRP
Trigger: TGGCCTCTGGATGAAACGTCAGGAATTTACTACACA...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR TCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAATCTTGGAAGTCAGTGTaGGTTTTTCCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQSWKSV*VFPSAS
Trigger: TGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGA...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACGTGATCAGGAAGGATaGCTCGGGAAGTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKERDQEG*LGKYSF
Trigger: AAAACTATACTTCCCGAGGCATCCTTCCTGATCACG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATAGAAATATTCCTTCCTaGTGGACTCAGAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNRNIPS*WTQRTP
Trigger: TGGGGTTCTCTGAGTCCAGCAGGAAGGAATATTTCT...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAAGAAATATTCCTTCCTaGTGGACTCAGAGAACCCCA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKERNIPS*WTQRTP
Trigger: TGGGGTTCTCTGAGTCCAGCAGGAAGGAATATTTCT...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGGACATAGGACATTGCTaGAAAGAACTCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEDIGHC*KELLET
Trigger: TGTTTCCAAGAGTTCTTTGCAGCAATGTCCTATGTC...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGTTTCTACACACATaGCCATTTCTTCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVLFLHT*PFLRNG
Trigger: CCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACATGGAGTGCGCTTTATTaGCGAGCAGAAGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTWSALY*RAEAGT
Trigger: AGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCA...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGTGCAATCTCAGCAATTaGGAAGATCTTGCTCACGTC +
Preference number: 4 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELCNLSN*EDLAHV
Trigger: GACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCA...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CCA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGAAGCGCAGGGCATTATaGATCATTTTCAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLKRRAL*IIFRRT
Trigger: AGTCCTCCTGAAAATGATCCATAATGCCCTGCGCTT...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACCCTAAAGGCTCTAATTaGTTGCCTTTCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNPKGSN*LPFICE
Trigger: TTCACAGATGAAAGGCAAGCAATTAGAGCCTTTAGG...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAAGACATAGGACATTGCTaGAAAGAACTCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: PQKQASSLLSISHMIKNKDIGHC*KELLET
Trigger: TGTTTCCAAGAGTTCTTTGCAGCAATGTCCTATGTC...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACAAGACATAGGACATTaGTGCAAAGAACTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRQDIGH*CKELLE
Trigger: TTCCAAGAGTTCTTTGCAGCAATGTCCTATGTCTTG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATCTGTTTCTACACACATaGCCATTTCTTCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNLFLHT*PFLRNG
Trigger: CCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAG...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp AAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAACAAAGACTCTTCACTaGAGAGTGGCTCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: KISSKIKPPTIPRSRDNTTKTLH*RVAQRV
Trigger: AACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGT...TGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATCCTAAAGGCTCTAATTaGTTGCCTTTCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNPKGSN*LPFICE
Trigger: TTCACAGATGAAAGGCAAGCAATTAGAGCCTTTAGG...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAGACATAGGACATTGCTaGAAAGAACTCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEDIGHC*KELLET
Trigger: TGTTTCCAAGAGTTCTTTGCAGCAATGTCCTATGTC...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR GCA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACAAGACATAGGACATTaGTGCAAAGAACTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEQDIGH*CKELLE
Trigger: TTCCAAGAGTTCTTTGCAGCAATGTCCTATGTCTTG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CCA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAATGGATTCGCACAAACTaGAATTTCATTTCTAGATCA +
Preference number: 4 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQWIRTN*NFISRS
Trigger: TGATCTAGAAATGAAATTCCAGTTTGTGCGAATCCA...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGCCAGGTGGGGTTCACTaGGGCTGTAGGGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: APRVSSSGVRQLWACVPAPGGVH*GCRGMR
Trigger: CCTCATTCCCCTACAGCCCAAGTGAACCCCACCTGG...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGGACTATGCGAGGTTCTaGGGTATCCAGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PQSLILRSAPALGLRAGGDYARF*GIQAWA
Trigger: GGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTC...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PQSLILRSAPALGLRAGGRMQVP*RGRRRH
Trigger: GTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACG...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGTCAGCGGGGGTGGCTaGTGGATTCGCACAAACTGG +
Preference number: 5 (lower is better)
Translates to: APRVSSSGVRQLWACVPAVSGGG*WIRTNW
Trigger: CCAGTTTGTGCGAATCCACAAGCCACCCCCGCTGAC...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGCATCCGTGAGCACATaGAAGCTCAGGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: APRVSSSGVRQLWACVPAASVST*KLRSSS
Trigger: CGAGCTGGACCTGAGCTTCAATGTGCTCACGGATGC...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGTGCAGTCGCTGTAGCTaGCAGCTCGGCTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: APRVSSSGVRQLWACVPACSRCS*QLGCLS
Trigger: ACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGCA...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCGGAGGGCTCTAGGCTaGGCTGCTGTGGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHRRALG*AAVATR
Trigger: TCTGGTGGCCACAGCAGCCAAGCCTAGAGCCCTCCG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS CCA 90 bp AGCAGGGAATGGGCTTTCAGAACCCAGAGTGGAGCCCCGGGCTGCTaGCTCCCAGGTTTCTTCAGACCTCTCCAGGCCCTGGGGCACCAG +
Preference number: 5 (lower is better)
Translates to: SREWAFRTQSGAPGC*LPGFFRPLQALGHQ
Trigger: CTGGTGCCCCAGGGCCTGGAGAGGTCTGAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCCACTCTGGGTTCTGAAAGCCCATTCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000572143.1
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp GGCCATGTGGAACAGAGGCTCTCTCTCACAGAAGGCTCCCATGGGTaGTGGTGGGGCTGTAGGCTGGTGTGCGCCTGTGGGGGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: GHVEQRLSLTEGSHG*WWGCRLVCACGGVP
Trigger: AGGAACGCCCCCACAGGCGCACACCAGCCTACAGCCCCACCACCACCCATGGGAGCCTTCTGTGAGAGAGAGCCTCTGTTCCACATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp ACAGCCCTCCCGTGGACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGCCTGCCTGGCCAGTGTaGACTTCCCAATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: TALPWTPARAPRVSSSGVPAWPV*TSQFQQ
Trigger: CTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAGG...CACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGTCCACGGGAGGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCTGGTGGGGCTCCATGTaGATCTGTGCTGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: PGQNEAILESPRTALPWTWWGSM*ICAACP
Trigger: AGGGCAGGCAGCACAGATCAACATGGAGCCCCACCA...GGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: AGSAATGPASPGHFQDVVPTSSR*FCCRSS
Trigger: GCTAGACCTGCAGCAGAACAACCTGGATGACGTTGG...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGCTCCAGGCTCAGCCTaGATGTCCAGCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHAPGSA*MSSRGP
Trigger: AGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGC...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCGCTCCAGGCTCAGCCTaGATGTCCAGCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSAPGSA*MSSRGP
Trigger: AGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGC...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp TCCCAGGTATGGAGGGCTAGGTCCCAGGCCCGCTGCTCCCCATACTaGGCCACCAGGTACGAGGCCACCTCCATGCCACTCGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQVWRARSQARCSPY*ATRYEATSMPLVFS
Trigger: AGAGAAGACGAGTGGCATGGAGGTGGCCTCGTACCTGGTGGCTCAGTATGGGGAGCAGCGGGCCTGGGACCTAGCCCTCCATACCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp AGCAAACTGCCCAGCAGTGCATCCGCCGGCTGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTCGGCTCCTGCAAGACCCATCCTGGC +
Preference number: 5 (lower is better)
Translates to: SKLPSSASAGCGWLQ*RQSSELGSCKTHPG
Trigger: GCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CCGCCGGCAATTCATGGATCCAGGGCATTAGCACTGCGGTGGAGGTaGGTTGGCTGGGAGACCCCAGGTGGGGTTCACTTGGGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: PPAIHGSRALALRWR*VGWETPGGVHLGCR
Trigger: CCTACAGCCCAAGTGAACCCCACCTGGGGTCTCCCAGCCAACCCACCTCCACCGCAGTGCTAATGCCCTGGATCCATGAATTGCCGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CATGTGGAACAGAGGCTCTCTCTCACAGAAGGCTCCCATGGGTGGTaGTGGGGCTGTAGGCTGGTGTGCGCCTGTGGGGGCGTTCCTACC +
Preference number: 5 (lower is better)
Translates to: HVEQRLSLTEGSHGW*WGCRLVCACGGVPT
Trigger: GGTAGGAACGCCCCCACAGGCGCACACCAGCCTACAGCCCCACCACCACCCATGGGAGCCTTCTGTGAGAGAGAGCCTCTGTTCCACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp GCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGAGGTTTCTGGTGACCTaGAGGACGGAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: APRVSSSGVRQLWACVPARFLVT*RTEKRI
Trigger: GATTCTCTTCTCCGTCCTCAAGGTCACCAGAAACCT...CGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCGTCAGCGGGGGTGGCTaGTGGATTCGCACAAACTGG +
Preference number: 5 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSVSGGG*WIRTNW
Trigger: CCAGTTTGTGCGAATCCACAAGCCACCCCCGCTGAC...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATCCCTCCTATTCCTCTTaGCGCCTGGATGGGATCCGG +
Preference number: 5 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHPSYSS*RLDGIR
Trigger: CCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGG...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCGGGGTCTGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCAGCCCCTTTTGTCTaGGGTCTCACAGCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: AGSAATGPASPGHFQDVVSAPFV*GLTAPE
Trigger: TTCTGGAGCTGTGAGACCCAAGACAAAAGGGGCTGA...GACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCAGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGCATGGTCTGGGGAGCTaGGAAGAGCTTGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVHGLGS*EELGRG
Trigger: TCCTCTACCAAGCTCTTCCAAGCTCCCCAGACCATG...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCGTGGATGTGGGGGCGTaGGGTGACTCCTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLVDVGA*GDSWLG
Trigger: TCCAAGCCAGGAGTCACCCAACGCCCCCACATCCAC...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCTGCGTGCCGGCGGGAGGGATGGGGTGCTCTaGAAGAATACCCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: PQSLILRSAPALGLRAGGRDGVL*KNTHLQ
Trigger: TTGAAGATGGGTATTCTTCAAGAGCACCCCATCCCT...CCCGCCGGCACGCAGGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGCAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: NEAILESPRTALPWTPARQLCCG*ISPRNW
Trigger: CCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTG...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCTCCTGGCGTCTCTGTaGCACCTGAGGTTCCACGGC +
Preference number: 5 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGLLASL*HLRFHG
Trigger: GCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CAA 90 bp CCTGAGATGCTGTTAGGCCACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGCAGGAGTCCCTTTTaGCTGCCCTTCTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PEMLLGHLDWGPLWHPWHGRSPF*LPFSQS
Trigger: ACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGCC...ATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTGGCCTAACAGCATCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp CGCAGGCTGCTGGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCTaGGGTTCCACGGCTGGCTGGTGTTCCTTCCTGGAATGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: RRLLGTSISWRLCCT*GSTAGWCSFLEWRE
Trigger: CTCCCTCCATTCCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 90 bp CGGGCTATCAGCTGCTCTCGATACTGGTCCACAAAGTGCAGCAACTaGGGGGCATCCAGAGGTGAAGGTACGGCTATGCGGGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RAISCSRYWSTKCSN*GASRGEGTAMRAGG
Trigger: CCCTCCAGCCCGCATAGCCGTACCTTCACCTCTGGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp CCTGCTGAAGGTGCTGTGGCACTTCTAGCCCAATGCAGGGTCAGCTaGCTGCCCCACCCTGAGAGGCTTCTGGGAGCTCACATCCAATGC +
Preference number: 5 (lower is better)
Translates to: PAEGAVALLAQCRVS*LPHPERLLGAHIQC
Trigger: GCATTGGATGTGAGCTCCCAGAAGCCTCTCAGGGTGGGGCAGGCAGCTGACCCTGCATTGGGCTAGAAGTGCCACAGCACCTTCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 90 bp ATCCCCTCAGCTACCCACCCCAGGCTTGCTCACCATCAAAGACTGTaGCCTGTTAGCCTTTCCCAGGCCGCATTCTGGGCCTCACCCTGC +
Preference number: 5 (lower is better)
Translates to: IPSATHPRLAHHQRL*PVSLSQAAFWASPC
Trigger: GCAGGGTGAGGCCCAGAATGCGGCCTGGGAAAGGCTAACAGGGCACAGTCTTTGATGGTGAGCAAGCCTGGGGTGGGTAGCTGAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 90 bp AAAACCCTTCTCTCTGAGCCCTGGGTGCACCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACTGCGGTGGAGGTGGGTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KTLLSEPWVHPAGNS*IQGISTAVEVGWLG
Trigger: TCCCAGCCAACCCACCTCCACCGCAGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCCTGGAGTGCGCTTTATaGGCGAGCAGAAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSLECAL*ASRSWN
Trigger: GTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAG...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCCAGGTGGGGTTCACTaGGGCTGTAGGGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHPGGVH*GCRGMR
Trigger: CCTCATTCCCCTACAGCCCAAGTGAACCCCACCTGG...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCTGGGTGACTCCTGGCTaGGAGACTCATGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGWVTPG*ETHGLG
Trigger: CCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCA...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CAA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGGGTGACTCCTGGCTaGGAGACTCATGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGWVTPG*ETHGLG
Trigger: CCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCA...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCCAGGCGTATGAGTTaGCAGGCAGGATGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: GSHSSRSEPGQNEAILESPRRMS*QAGCLS
Trigger: GCTCAGGCATCCTGCCTGCAAACTCATACGCCTGGG...GGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGCCGAGTCTCTGCCGCTaGAGTGAGGATGTGCTATTA +
Preference number: 5 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVPSLCR*SEDVLL
Trigger: TAATAGCACATCCTCACTCAAGCGGCAGAGACTCGG...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAGCTCCAGGCTCAGCCTaGATGTCCAGCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SHSSRSEPGQNEAILESPAPGSA*MSSRGP
Trigger: AGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGC...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATGTCCACATGGCCCCCTaGGAGAGCCACAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHVHMAP*ESHKVR
Trigger: CCTCACTTTGTGGCTCTCCAAGGGGGCCATGTGGAC...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp CGCAGGCTGCTGGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCTaGGGTTCCACGGCTGGCTGGTGTTCCTTCCTGGTTTCACCAAGG +
Preference number: 5 (lower is better)
Translates to: RRLLGTSISWRLCCT*GSTAGWCSFLVSPR
Trigger: CCTTGGTGAAACCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS TCA 90 bp TGTGGCACTTCTAGCCCAATGCAGGGTCAGCTGCCTGCCCCACCCTaGGAGGCTTCTGGGAGCTCACATCCAATGCTGATCATCCCCGTG +
Preference number: 5 (lower is better)
Translates to: CGTSSPMQGQLPAPP*EASGSSHPMLIIPV
Trigger: CACGGGGATGATCAGCATTGGATGTGAGCTCCCAGAAGCCTCTCAGGGTGGGGCAGGCAGCTGACCCTGCATTGGGCTAGAAGTGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 90 bp CCCTCACAGAGCAGTCGCACGCCAACGTCATCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGGCTGGGGCTGGCACTAAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: PSQSSRTPTSSRLFC*RSSSFRLGLALSTE
Trigger: CTCTGTGCTTAGTGCCAGCCCCAGCCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGACGTTGGCGTGCGACTGCTCTGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp AGCCCCTCACAGAGCAGTCGCACGCCAACGTCATCCAGGTTGTTCTaGTGCAGGTCTAGCTCCTTCAGGCTGGGGCTGGCACTAAGCACA +
Preference number: 5 (lower is better)
Translates to: SPSQSSRTPTSSRLF*CRSSSFRLGLALST
Trigger: TGTGCTTAGTGCCAGCCCCAGCCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGACGTTGGCGTGCGACTGCTCTGTGAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp AGCTTCCACAGCTCCAGGCTCAGCCTTGATGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTGTGGGTTGATCTCACCCAGGAACTG +
Preference number: 5 (lower is better)
Translates to: SFHSSRLSLDVQQRP*HHPAVLWVDLTQEL
Trigger: CAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGCTGTGGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp TGGCTGGGCCTCGTGTTCTCAGCCAGCACCCTCTCGTACTGCTCCTaGCTCAGCACCTGTCCATGCAGTTTGTCCAAGACAACCTCCACC +
Preference number: 5 (lower is better)
Translates to: WLGLVFSASTLSYCS*LSTCPCSLSKTTST
Trigger: GGTGGAGGTTGTCTTGGACAAACTGCATGGACAGGTGCTGAGCCAGGAGCAGTACGAGAGGGTGCTGGCTGAGAACACGAGGCCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCGTGGATGTGGGGGCGTaGGGTGACTCCTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGVDVGA*GDSWLG
Trigger: TCCAAGCCAGGAGTCACCCAACGCCCCCACATCCAC...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCCCTGCCTGGCCAGTGTaGACTTCCCAATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGPAWPV*TSQFQQ
Trigger: CTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAGG...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCATAGGAAACGTGTGGTaGATGCCCCAAACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGIGNVW*MPQTGH
Trigger: ATGGCCTGTTTGGGGCATCAACCACACGTTTCCTAT...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp ACCCCGGCTAGGGCCCCCAGAGTCTCATCCTCAGGAGTGCGCCAGCTCTGGGCCGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: TPARAPRVSSSGVRQLWAEMGHH*CQERFV
Trigger: AACAAAACGTTCCTGACACAAGTGATGGCCCATTTC...GGCCCAGAGCTGGCGCACTCCTGAGGATGAGACTCTGGGGGCCCTAGCCGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTGGTGGGGCTCCATGTaGATCTGTGCTGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCWWGSM*ICAACP
Trigger: AGGGCAGGCAGCACAGATCAACATGGAGCCCCACCA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGCATCCGTGAGCACATaGAAGCTCAGGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWASVST*KLRSSS
Trigger: CGAGCTGGACCTGAGCTTCAATGTGCTCACGGATGC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATTGCAGTCGCTGTAGCTaGCAGCTCGGCTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHCSRCS*QLGCLS
Trigger: ACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGCA...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGTCTCATCACTCAGAGTaGTCTGGTCCAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: HSSRSEPGQNEAILESPRSHHSE*SGPAPG
Trigger: GCCTGGGGCTGGACCAGACAACTCTGAGTGATGAGA...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGTCCACATGGCCCCCTaGGAGAGCCACAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVVHMAP*ESHKVR
Trigger: CCTCACTTTGTGGCTCTCCAAGGGGGCCATGTGGAC...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGCCCTCTCTGGCTTCATaGGTACTGCCGCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQPSLAS*VLPQAA
Trigger: AGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGG...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGGCAGGAGTCCCTTTTaGCTGCCCTTCTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWGRSPF*LPFSQS
Trigger: ACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGCC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATAGGTCTGCAGGGGTCTaGCCAGCTCCAGATGGACAT +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHRSAGV*PAPDGH
Trigger: ATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCCCTCCTATTCCTCTTaGCGCCTGGATGGGATCCGG +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVPSYSS*RLDGIR
Trigger: CCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS GCA 90 bp ATGTGTCAGGCAGCTGTCTCAAAACCCTTCTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCATGGATCCAGGGCATTAGCACTGCGG +
Preference number: 5 (lower is better)
Translates to: MCQAAVSKPFSLSPG*TPPAIHGSRALALR
Trigger: CCGCAGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTGAGACAGCTGCCTGACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp GGCTGTGGCTGGCTCCAGTGCAGACAGAGCTCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCATCTACACCATCGAGGATGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GCGWLQCRQSSELGS*KTHPGSSTPSRMKS
Trigger: GCTCTTCATCCTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp GGCTCAGCCTTGATGTCCAGCAGAGGCCCTGCCACCATCCAGCTGTaGTGTGGGTTGATCTCACCCAGGAACTGGTCCCACACACAGAAT +
Preference number: 5 (lower is better)
Translates to: GSALMSSRGPATIQL*CGLISPRNWSHTQN
Trigger: ATTCTGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGACATCAAGGCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp AGGCCTCCTTGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTaGCGCAGGCTGCTGGGCACTAGTATCTCCTGGCGTCTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: RPPCHPPSPLWLHWY*RRLLGTSISWRLCC
Trigger: GCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS CCA 90 bp TATAGTTTTCCCCAGCAAACTGCCCAGCAGTGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACAGAGCTCAGAACTCGGCTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: YSFPQQTAQQCIRRL*LAPVQTELRTRLLQ
Trigger: TTGCAGGAGCCGAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTGCTGGGGAAAACTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp TTTGTTCCGAGTCTCGTACAAGCAGTGGAGGGACTCCAGAGAGTGTaGCTGCAGCAGCAGCTGCAGGGACGGGACCCACTGCATCAGGTT +
Preference number: 5 (lower is better)
Translates to: FVPSLVQAVEGLQRV*LQQQLQGRDPLHQV
Trigger: AACCTGATGCAGTGGGTCCCGTCCCTGCAGCTGCTGCTGCAGCCACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGACTCGGAACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTGGCTTCATTaGTACTGCCGCAGGCTGCTGGGCACTAGTATCTCCTGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: LLRPPCHPPSPLWLH*YCRRLLGTSISWRL
Trigger: GAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS CCA 90 bp ACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGCAGGCTGCTGGGCACTAGTATCTCC +
Preference number: 5 (lower is better)
Translates to: TCGLLRPPCHPPSPL*LHWYCRRLLGTSIS
Trigger: GGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS CCA 90 bp GTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGCAGGCTGCTGGGCACTAGTATCTCC +
Preference number: 5 (lower is better)
Translates to: VCGLLRPPCHPPSPL*LHWYCRRLLGTSIS
Trigger: GGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544378.6
ENST00000574406.1
CDS CCA 90 bp CCAGGTGACCCCTGGGGGCTCTGTCTGTCAGGAATTGAGAGAGCTTaGCTGACTCCATGGCCTCATCCTGGTGCAAGCTATGCCTATGCC +
Preference number: 5 (lower is better)
Translates to: PGDPWGLCLSGIERA*LTPWPHPGASYAYA
Trigger: GGCATAGGCATAGCTTGCACCAGGATGAGGCCATGGAGTCAGCCAAGCTCTCTCAATTCCTGACAGACAGAGCCCCCAGGGGTCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCTGGAGTGCGCTTTATaGGCGAGCAGAAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPLECAL*ASRSWN
Trigger: GTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAG...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCATGGTCTGGGGAGCTaGGAAGAGCTTGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCHGLGS*EELGRG
Trigger: TCCTCTACCAAGCTCTTCCAAGCTCCCCAGACCATG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAGACTATGCGAGGTTCTaGGGTATCCAGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPDYARF*GIQAWA
Trigger: GGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTC...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CGTGGTCTCCTGGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAG +
Preference number: 5 (lower is better)
Translates to: RGLLVRQLLRVPVSTPPGCVRNV*FRVSYK
Trigger: CTTGTACGAGACTCGGAACAAAACGTTCCTGACACA...GCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACCAGGAGACCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCAAAGGCAAGGTCCTaGCAGTCCTCAGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPPKARS*QSSAVR
Trigger: CCTCACAGCTGAGGACTGCAAGGACCTTGCCTTTGG...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGCCAAAGGCAAGGTCCTaGCAGTCCTCAGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQPKARS*QSSAVR
Trigger: CCTCACAGCTGAGGACTGCAAGGACCTTGCCTTTGG...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCCAAAGGCAAGGTCCTaGCAGTCCTCAGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVPKARS*QSSAVR
Trigger: CCTCACAGCTGAGGACTGCAAGGACCTTGCCTTTGG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGGCATCCGTGAGCACATaGAAGCTCAGGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVASVST*KLRSSS
Trigger: CGAGCTGGACCTGAGCTTCAATGTGCTCACGGATGC...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGPTSSR*FCCRSS
Trigger: GCTAGACCTGCAGCAGAACAACCTGGATGACGTTGG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCCCAGGCGTATGAGTTaGCAGGCAGGATGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGPRRMS*QAGCLS
Trigger: GCTCAGGCATCCTGCCTGCAAACTCATACGCCTGGG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTTCTCATCACTCAGAGTaGTCTGGTCCAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCSHHSE*SGPAPG
Trigger: GCCTGGGGCTGGACCAGACAACTCTGAGTGATGAGA...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCRMQVP*RGRRRH
Trigger: GTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACG...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGRMQVP*RGRRRH
Trigger: GTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPQLCCG*ISPRNW
Trigger: CCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTG...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTGTCCACATGGCCCCCTaGGAGAGCCACAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCVHMAP*ESHKVR
Trigger: CCTCACTTTGTGGCTCTCCAAGGGGGCCATGTGGAC...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCGTCCACATGGCCCCCTaGGAGAGCCACAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GSDNKVCGLLRPPCHPPSVHMAP*ESHKVR
Trigger: CCTCACTTTGTGGCTCTCCAAGGGGGCCATGTGGAC...GCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTCTACTCAGGCCTCCTaGTCATCCACCAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LRPTCGLLRPPCHPPSPLSTQAS*SSTKPS
Trigger: AGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGTCTACTCAGGCCTCCTaGTCATCCACCAAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HSSRSEPGQNEAILESPRSTQAS*SSTKPS
Trigger: AGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGA...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTAGGTCTGCAGGGGTCTaGCCAGCTCCAGATGGACAT +
Preference number: 5 (lower is better)
Translates to: LFLFAPGWDPEGSRLGCCRSAGV*PAPDGH
Trigger: ATGTCCATCTGGAGCTGGCAAGACCCCTGCAGACCT...ACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCCCTCCTATTCCTCTTaGCGCCTGGATGGGATCCGG +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGPSYSS*RLDGIR
Trigger: CCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp CCTCCTGCAAGTGAAAGGCCCCGGGGTGAACCAAGGCCAGGATGCTaGAACGCTGTAACCAGGGTGCTGTTCCTCTCTATCCTACAGCGT +
Preference number: 5 (lower is better)
Translates to: PPASERPRGEPRPGC*NAVTRVLFLSILQR
Trigger: ACGCTGTAGGATAGAGAGGAACAGCACCCTGGTTACAGCGTTTCAGCATCCTGGCCTTGGTTCACCCCGGGGCCTTTCACTTGCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 90 bp TTCACCTGCCTGGCCAGTGTTGACTTCCCAATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGTTCTTGGGTATCCAGGCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: FTCLASVDFPIPAAP*SMTMRGSWVSRPGP
Trigger: TGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp AGGACCTCTACCCAACGTGCCTGCTCCAAAGAAGGAATGAGGTTCTaGAGAGCTGTGGTCCGAGCCGTGATCAGGAAGGATGCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: RTSTQRACSKEGMRF*RAVVRAVIRKDASG
Trigger: TCCCGAGGCATCCTTCCTGATCACGGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGAGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp TTCCTGCTGGACTCAGAGAACCCCAGGACCTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGGTTCTGCAGAGCTGTGGTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: FLLDSENPRTSTQRA*SKEGMRFCRAVVRA
Trigger: GGCTCGGACCACAGCTCTGCAGAACCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGAGGTCCTGGGGTTCTCTGAGTCCAGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp GTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTaGTGGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: VIHQALSGFIGTAAG*WALVSPGVSVAPEV
Trigger: AACCTCAGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS GCA 90 bp GATGTCACTCGGGCTATCAGCTGCTCTCGATACTGGTCCACAAAGTaGAGCAACTGCGGGGCATCCAGAGGTGAAGGTACGGCTATGCGG +
Preference number: 5 (lower is better)
Translates to: DVTRAISCSRYWSTK*SNCGASRGEGTAMR
Trigger: CCGCATAGCCGTACCTTCACCTCTGGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGTGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp TCAGCCAGCACCCTCTCGTACTGCTCCTGGCTCAGCACCTGTCCATaGAGTTTGTCCAAGACAACCTCCACCGATGTCACTCGGGCTATC +
Preference number: 5 (lower is better)
Translates to: SASTLSYCSWLSTCP*SLSKTTSTDVTRAI
Trigger: GATAGCCCGAGTGACATCGGTGGAGGTTGTCTTGGACAAACTGCATGGACAGGTGCTGAGCCAGGAGCAGTACGAGAGGGTGCTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CACTCGTCTTCTCTGGCTGAGCGGGTGTCTCACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGAGCAGAAGCTGGAACTCCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: HSSSLAERVSHPKSS*SALYWRAEAGTPSA
Trigger: AGCTGAAGGAGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CCAGATGTGTCAGGCAGCTGTCTCAAAACCCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAATTCATGGATCCAGGGCATTAGCACT +
Preference number: 5 (lower is better)
Translates to: PDVSGSCLKTLLSEP*VHPAGNSWIQGIST
Trigger: AGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTGAGACAGCTGCCTGACACATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp ATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTaGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCTGAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: IHQALSGFIGTAAGC*ALVSPGVSVAPEVP
Trigger: TGGAACCTCAGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS-3UTR CAA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCACCAGGTGGGGTTCACTaGGGCTGTAGGGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: SPKPISQTHLRSTQASLSPGGVH*GCRGMR
Trigger: CCTCATTCCCCTACAGCCCAAGTGAACCCCACCTGG...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGTGGATGTGGGGGCGTaGGGTGACTCCTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSVDVGA*GDSWLG
Trigger: TCCAAGCCAGGAGTCACCCAACGCCCCCACATCCAC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCTTGACCAGGGGATCTaGGCTTCTGGGGTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCLDQGI*ASGVRS
Trigger: AGACCTCACCCCAGAAGCCAAGATCCCCTGGTCAAG...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCLWQRC*APASVS
Trigger: GCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAG...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTTGCAGTCGCTGTAGCTaGCAGCTCGGCTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCCSRCS*QLGCLS
Trigger: ACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGCA...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTCATCACTCAGAGTaGTCTGGTCCAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGSHHSE*SGPAPG
Trigger: GCCTGGGGCTGGACCAGACAACTCTGAGTGATGAGA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCCGAGTCTCTGCCGCTaGAGTGAGGATGTGCTATTA +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHPSLCR*SEDVLL
Trigger: TAATAGCACATCCTCACTCAAGCGGCAGAGACTCGG...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AACGAAGCCATCCTAGAGTCCCCAAGGACAGCCCTCCCGTGGACCCCGGCTAGGCTGCAATCTCAGCAATaGGGAAGATCTTGCTCACGT +
Preference number: 5 (lower is better)
Translates to: NEAILESPRTALPWTPARLQSQQ*GRSCSR
Trigger: ACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAG...CCTAGCCGGGGTCCACGGGAGGGCTGTCCTTGGGGACTCTAGGATGGCTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGGAATGGAGCAGTCACTaGGGATCAGGTAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWEWSSH*GSGRGG
Trigger: TCCACCTCTACCTGATCCCAAGTGACTGCTCCATTC...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGGCCTCAGAGCTCCAGTTCCTaGGGGAGTATTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: PVSTPPGSDNKVCGLLRPQSSSS*GSISSI
Trigger: GATGCTGGAAATACTCCCCAAGGAACTGGAGCTCTG...AGGCCTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATACCTGTCCATGCAGTTaGTCCAAGACAACCTCCACC +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHTCPCS*SKTTST
Trigger: GGTGGAGGTTGTCTTGGACAAACTGCATGGACAGGT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCGGAGGGCTCTAGGCTaGGCTGCTGTGGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSRRALG*AAVATR
Trigger: TCTGGTGGCCACAGCAGCCAAGCCTAGAGCCCTCCG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAAAGTCTGCGGTCTACTCAGATCCCTCAGCCCCTTTaGTCTTGGGTCTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: GTSLDSSGQRQQSLRSTQIPQPL*SWVSQL
Trigger: GAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGAT...CTGAGTAGACCGCAGACTTTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS TCA 90 bp GAGCAACATGGGAAGCCGCCCTCTCTGATCCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTACTCATCTCTCCCGTATCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: EQHGKPPSLIRVSAA*VRMCYYSSLPYPGP
Trigger: AGGGCCTGGATACGGGAGAGATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGACTCGGATCAGAGAGGGCGGCTTCCCATGTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 90 bp CAGAAGTCATCGTCAGTCCCCAAAGGCTTCGTATGCAGGTCCCCTTaGGAGGCAGGAGAAGGCACGCACAAGAGTTCCACCGGTACTACC +
Preference number: 5 (lower is better)
Translates to: QKSSSVPKGFVCRSP*EAGEGTHKSSTGTT
Trigger: GGTAGTACCGGTGGAACTCTTGTGCGTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACGAAGCCTTTGGGGACTGACGATGACTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp TTCCTTCCTGCTGGACTCAGAGAACCCCAGGACCTCTACCCAACGTaGCTGCTCCAAAGAAGGAATGAGGTTCTGCAGAGCTGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: FLPAGLREPQDLYPT*LLQRRNEVLQSCGP
Trigger: CGGACCACAGCTCTGCAGAACCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGAGGTCCTGGGGTTCTCTGAGTCCAGCAGGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp GTGGTGGTCTTGGAAGTCAGTGTGAGTTTTTCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAGGCCAGCCAGGACACCCAGGGCACA +
Preference number: 5 (lower is better)
Translates to: VVVLEVSVSFSFRFI*CIRQVQASQDTQGT
Trigger: TGTGCCCTGGGTGTCCTGGCTGGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGACCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp GGTCCACTGGCCGGCTTTGTTAGTTGCAGCAAATCCAACTCAAACTaGCATCAGAGAACTCCCTGCCTCCTGCAAGTGAAAGGCCCCGGG +
Preference number: 5 (lower is better)
Translates to: GPLAGFVSCSKSNSN*HQRTPCLLQVKGPG
Trigger: CCCGGGGCCTTTCACTTGCAGGAGGCAGGGAGTTCTCTGATGGCAGTTTGAGTTGGATTTGCTGCAACTAACAAAGCCGGCCAGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 90 bp AGCTTGGCTGACTCCATGGCCTCATCCTGGTGCAAGCTATGCCTATaGCCAGCAACAAGAGCTAACTTCGTCCCAGCCCAGGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: SLADSMASSWCKLCL*PATRANFVPAQGLQ
Trigger: CTGAAGTCCCTGGGCTGGGACGAAGTTAGCTCTTGTTGCTGGGCATAGGCATAGCTTGCACCAGGATGAGGCCATGGAGTCAGCCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 90 bp ACCAGCTGCAGTCGCTGTAGCTTGCAGCTCGGCTGTCTCAGTCTCTaGCAAAGGTGTTTGGCTCCAGCATCCGTGAGCACATTGAAGCTC +
Preference number: 5 (lower is better)
Translates to: TSCSRCSLQLGCLSL*QRCLAPASVSTLKL
Trigger: GAGCTTCAATGTGCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGCAGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp ACAACCTCCACCGATGTCACTCGGGCTATCAGCTGCTCTCGATACTaGTCCACAAAGTGCAGCAACTGCGGGGCATCCAGAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: TTSTDVTRAISCSRY*STKCSNCGASRGEG
Trigger: ACCTTCACCTCTGGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGTGACATCGGTGGAGGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCTGGGTGACTCCTGGCTaGGAGACTCATGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPWVTPG*ETHGLG
Trigger: CCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCA...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCTTGACCAGGGGATCTaGGCTTCTGGGGTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPLDQGI*ASGVRS
Trigger: AGACCTCACCCCAGAAGCCAAGATCCCCTGGTCAAG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCAGGCCAGCTTCTCTaGACCAGGGGATCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGSGQLL*TRGSWL
Trigger: AAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTGA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGACTATGCGAGGTTCTaGGGTATCCAGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSDYARF*GIQAWA
Trigger: GGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCCAAAGGCAAGGTCCTaGCAGTCCTCAGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPPKARS*QSSAVR
Trigger: CCTCACAGCTGAGGACTGCAAGGACCTTGCCTTTGG...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CAAATCCTTCAAAGACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGCCCAGGCGTATGAGTTaGCAGGCAGGATGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: QILQRPASPKPISQTHLRPRRMS*QAGCLS
Trigger: GCTCAGGCATCCTGCCTGCAAACTCATACGCCTGGG...CCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTCTTTGAAGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGCTTTCCTCGTGGCTCTaGCCTGCAATCTCAGCAATT +
Preference number: 5 (lower is better)
Translates to: HSSRSEPGQNEAILESPRLSSWL*PAISAI
Trigger: AATTGCTGAGATTGCAGGCAAGAGCCACGAGGAAAG...CCTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPRMQVP*RGRRRH
Trigger: GTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTGGGCCGGTGGGTAAATATCTaGCCAAGGTGGTTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: CHPPSPLWLHWYCRRLLGRWVNI*PRWFLV
Trigger: TACCAGGAACCACCTTGGCAAGATATTTACCCACCG...GCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS TCA 90 bp GCCTGGCCAGTGTTGACTTCCCAATTCCAGCAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGGTATCCAGGCCTGGGCCAAATAAGT +
Preference number: 5 (lower is better)
Translates to: AWPVLTSQFQQPPAV*LCEVLGYPGLGQIS
Trigger: ACTTATTTGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAATTGGGAAGTCAACACTGGCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 90 bp GCAATTGGGAAGATCTTGCTCACGTCCAGGAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCCCTCTCTGATCCGAGTCTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: AIGKILLTSRSLRLA*ATWEAALSDPSLCR
Trigger: GCGGCAGAGACTCGGATCAGAGAGGGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACTCCTGGACGTGAGCAAGATCTTCCCAATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp GTGGTCTTGGAAGTCAGTGTGAGTTTTTCCTTCCGCTTCATCTGCTaGATCAGGCAAGTGCAGGCCAGCCAGGACACCCAGGGCACAAGA +
Preference number: 5 (lower is better)
Translates to: VVLEVSVSFSFRFIC*IRQVQASQDTQGTR
Trigger: TCTTGTGCCCTGGGTGTCCTGGCTGGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGAAAAACTCACACTGACTTCCAAGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp AGTTTGTCCAAGACAACCTCCACCGATGTCACTCGGGCTATCAGCTaGTCTCGATACTGGTCCACAAAGTGCAGCAACTGCGGGGCATCC +
Preference number: 5 (lower is better)
Translates to: SLSKTTSTDVTRAIS*SRYWSTKCSNCGAS
Trigger: GGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGTGACATCGGTGGAGGTTGTCTTGGACAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CCTGCCACCATCCAGCTGTGCTGTGGGTTGATCTCACCCAGGAACTaGTCCCACACACAGAATTCAATCTCAACGGTCACCGCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: PATIQLCCGLISPRN*SHTQNSISTVTASL
Trigger: GAGAGAAGCGGTGACCGTTGAGATTGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp AGCCTTGATGTCCAGCAGAGGCCCTGCCACCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAACTGGTCCCACACACAGAATTCAAT +
Preference number: 5 (lower is better)
Translates to: SLDVQQRPCHHPAVL*VDLTQELVPHTEFN
Trigger: ATTGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGACATCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCACTGGAGTGCGCTTTATaGGCGAGCAGAAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SPKPISQTHLRSTQASLSLECAL*ASRSWN
Trigger: GTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAG...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCCAGGTGGGGTTCACTaGGGCTGTAGGGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLPGGVH*GCRGMR
Trigger: CCTCATTCCCCTACAGCCCAAGTGAACCCCACCTGG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCATGGTCTGGGGAGCTaGGAAGAGCTTGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHHGLGS*EELGRG
Trigger: TCCTCTACCAAGCTCTTCCAAGCTCCCCAGACCATG...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCCATGGTCTGGGGAGCTaGGAAGAGCTTGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLHGLGS*EELGRG
Trigger: TCCTCTACCAAGCTCTTCCAAGCTCCCCAGACCATG...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTGGGTGACTCCTGGCTaGGAGACTCATGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSWVTPG*ETHGLG
Trigger: CCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCA...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCGTGGATGTGGGGGCGTaGGGTGACTCCTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSVDVGA*GDSWLG
Trigger: TCCAAGCCAGGAGTCACCCAACGCCCCCACATCCAC...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTCAGGCCAGCTTCTCTaGACCAGGGGATCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLSGQLL*TRGSWL
Trigger: AAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTGA...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGACTATGCGAGGTTCTaGGGTATCCAGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFDYARF*GIQAWA
Trigger: GGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGACTATGCGAGGTTCTaGGGTATCCAGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLDYARF*GIQAWA
Trigger: GGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGCAGCCACAGGTCCCGCGAGTCCCGGACACTTCCAGGACGTGGTCTCCTGGTGAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: CSHRSRESRTLPGRGLLVSSLFD*TNLKAL
Trigger: TAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCT...CACCAGGAGACCACGTCCTGGAAGTGTCCGGGACTCGCGGGACCTGTGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTA +
Preference number: 5 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCRAQSS*FDLTNL
Trigger: TAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCT...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGATAGGAAACGTGTGGTaGATGCCCCAAACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVIGNVW*MPQTGH
Trigger: ATGGCCTGTTTGGGGCATCAACCACACGTTTCCTAT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAG +
Preference number: 5 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCCVRNV*FRVSYK
Trigger: CTTGTACGAGACTCGGAACAAAACGTTCCTGACACA...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAG +
Preference number: 5 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWCVRNV*FRVSYK
Trigger: CTTGTACGAGACTCGGAACAAAACGTTCCTGACACA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGGTGGGGCTCCATGTaGATCTGTGCTGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLWWGSM*ICAACP
Trigger: AGGGCAGGCAGCACAGATCAACATGGAGCCCCACCA...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTTGGTGGGGCTCCATGTaGATCTGTGCTGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFWWGSM*ICAACP
Trigger: AGGGCAGGCAGCACAGATCAACATGGAGCCCCACCA...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTAGGTTTCTGGTGACCTaGAGGACGGAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPRFLVT*RTEKRI
Trigger: GATTCTCTTCTCCGTCCTCAAGGTCACCAGAAACCT...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCCAAAGGCAAGGTCCTaGCAGTCCTCAGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSPKARS*QSSAVR
Trigger: CCTCACAGCTGAGGACTGCAAGGACCTTGCCTTTGG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPLWQRC*APASVS
Trigger: GCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCCCAGGCGTATGAGTTaGCAGGCAGGATGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLPRRMS*QAGCLS
Trigger: GCTCAGGCATCCTGCCTGCAAACTCATACGCCTGGG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCTGCAATCTCAGCAATaGGGAAGATCTTGCTCACGT +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHLQSQQ*GRSCSR
Trigger: ACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAG...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCTTTCCTCGTGGCTCTaGCCTGCAATCTCAGCAATT +
Preference number: 5 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPLSSWL*PAISAI
Trigger: AATTGCTGAGATTGCAGGCAAGAGCCACGAGGAAAG...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLRMQVP*RGRRRH
Trigger: GTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACG...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCACAGAGCTCCAGTTCCTaGGGGAGTATTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SPFLRPTCGLLRPPCHPPQSSSS*GSISSI
Trigger: GATGCTGGAAATACTCCCCAAGGAACTGGAGCTCTG...TGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCCAGAGCTCCAGTTCCTaGGGGAGTATTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGQSSSS*GSISSI
Trigger: GATGCTGGAAATACTCCCCAAGGAACTGGAGCTCTG...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572272.6
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCGGTCTCCTTCAGGGCTaGGTAGAGTCCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGGLLQG*VESIFA
Trigger: TGCAAAGATGGACTCTACCAAGCCCTGAAGGAGACC...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS GCA 90 bp AGAGTTCCACCGGTACTACCTCTGGGGAGCTTTCCTCGTGGCTCTTaGCTGCAATCTCAGCAATTGGGAAGATCTTGCTCACGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RVPPVLPLGSFPRGS*LQSQQLGRSCSRPG
Trigger: TCCTGGACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAGGCAAGAGCCACGAGGAAAGCTCCCCAGAGGTAGTACCGGTGGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000613500.4
CDS GCA 90 bp GTTAGTTGCAGCAAATCCAACTCAAACTGCCATCAGAGAACTCCCTaGCTCCTGCAAGTGAAAGGCCCCGGGGTGAACCAAGGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: VSCSKSNSNCHQRTP*LLQVKGPGVNQGQD
Trigger: ATCCTGGCCTTGGTTCACCCCGGGGCCTTTCACTTGCAGGAGGCAGGGAGTTCTCTGATGGCAGTTTGAGTTGGATTTGCTGCAACTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 90 bp ACCCTGAATGGACAAAGGCTACCTTTAGCTCCTGCTTCTGGGACCTaGCCAGAGTACATACCCCTCTCAGAGGTGAGAGAGGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLNGQRLPLAPASGT*PEYIPLSEVREASS
Trigger: AGAAGAGGCCTCTCTCACCTCTGAGAGGGGTATGTACTCTGGGCAGGTCCCAGAAGCAGGAGCTAAAGGTAGCCTTTGTCCATTCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 90 bp CAGCGAGGGCGTCTCAGGGTCTTACAAAGACTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTTAGGTCCAGCTCCTTCAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QRGRLRVLQRLFTAE*LSEFPLRSSSFRFL
Trigger: CAGAAACCTGAAGGAGCTGGACCTAAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGTAAGACCCTGAGACGCCCTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCGTGCTGTCCTTTGCCTaGGCTCTTACCGTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGVLSFA*ALTVSY
Trigger: ATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCAC...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATGAACAGTGCTGTCCTTaGCCTTGGCTCTTACCGTCT +
Preference number: 5 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHEQCCP*PWLLPS
Trigger: AGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTTC...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCATCCTAGAGTCCCCAAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTA +
Preference number: 5 (lower is better)
Translates to: SHSSRSEPGQNEAILESPRAQSS*FDLTNL
Trigger: TAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCT...TGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTAGGGATGGGGTGCTCTaGAAGAATACCCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPRDGVL*KNTHLQ
Trigger: TTGAAGATGGGTATTCTTCAAGAGCACCCCATCCCT...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTGCATCCGTGAGCACATaGAAGCTCAGGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SPCDTARGKWFHVPPIPLASVST*KLRSSS
Trigger: CGAGCTGGACCTGAGCTTCAATGTGCTCACGGATGC...AAGAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPPTSSR*FCCRSS
Trigger: GCTAGACCTGCAGCAGAACAACCTGGATGACGTTGG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GACCTGCCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCTGCAATCTCAGCAATaGGGAAGATCTTGCTCACGT +
Preference number: 5 (lower is better)
Translates to: DLPHLSPFLRPTCGLLRPLQSQQ*GRSCSR
Trigger: ACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAG...AGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGGCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CACCTGGACTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCTACAAGTTCTTTTCTTaGTCAACTACCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: HLDWGPLWHPWHGHIMPSYKFFS*STTSVA
Trigger: GGCTACTGAGGTAGTTGACAAAGAAAAGAACTTGTA...GCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAGTCCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFQLCCG*ISPRNW
Trigger: CCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTCAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSQLCCG*ISPRNW
Trigger: CCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTG...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCAGAGTCTCATCTTTCTaGTCTTTCACTTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCRVSSF*SFTCSL
Trigger: CAGGCTGCAAGTGAAAGACAAGAAAGATGAGACTCT...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCGGTCTCCTTCAGGGCTaGGTAGAGTCCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: VDLPVQSQESTWPPTLNPGLLQG*VESIFA
Trigger: TGCAAAGATGGACTCTACCAAGCCCTGAAGGAGACC...GGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCGGTCTCCTTCAGGGCTaGGTAGAGTCCATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLGLLQG*VESIFA
Trigger: TGCAAAGATGGACTCTACCAAGCCCTGAAGGAGACC...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAACGGAGGGCTCTAGGCTaGGCTGCTGTGGCCACCAGA +
Preference number: 5 (lower is better)
Translates to: LEGKPDGNLFAEKETETQRRALG*AAVATR
Trigger: TCTGGTGGCCACAGCAGCCAAGCCTAGAGCCCTCCG...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS GCA 90 bp CCAGGTGGTGAGGGTATCAGGCAGGCAGAGAACAGTGCTGTCCTTTaGCTTGGCTCTTACCGTCTCTTATTCAGCATTCGGAACCCAGTT +
Preference number: 5 (lower is better)
Translates to: PGGEGIRQAENSAVL*LGSYRLLFSIRNPV
Trigger: AACTGGGTTCCGAATGCTGAATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTTCTCTGCCTGCCTGATACCCTCACCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp AGAGGCAGGAGAAGGCACGCACAAGAGTTCCACCGGTACTACCTCTaGGGAGCTTTCCTCTGCAATCTCAGCAATTGGGAAGATCTTGCT +
Preference number: 5 (lower is better)
Translates to: RGRRRHAQEFHRYYL*GAFLCNLSNWEDLA
Trigger: AGCAAGATCTTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTGGAACTCTTGTGCGTGCCTTCTCCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp CTATCTTCTATGGGAAGCCCCTGTTTCATGGCTCCAGCTCTCAGATaGCGTCTGATGACACTGTTTCTTCTCCCTGCCTTGGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LSSMGSPCFMAPALR*RLMTLFLLPALESH
Trigger: GTGGCTCTCCAAGGCAGGGAGAAGAAACAGTGTCATCAGACGCCATCTGAGAGCTGGAGCCATGAAACAGGGGCTTCCCATAGAAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571307.1
CDS CCA 90 bp GCAGCAGCAGCAGCAGCAGCCAATCACTGGCCACCGACTGTGTGCTaGGAACTGTGCTCAACATTTCTGCAGAGATGGTCTCACTTAATT +
Preference number: 5 (lower is better)
Translates to: AAAAAAANHWPPTVC*ELCSTFLQRWSHLI
Trigger: AATTAAGTGAGACCATCTCTGCAGAAATGTTGAGCACAGTTCCCAGCACACAGTCGGTGGCCAGTGATTGGCTGCTGCTGCTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp CACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCATGTGCTGTCCTTTGCCTaGGCTCTTACCGTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: HLSPFLRPTCGLLRPPCHVLSFA*ALTVSY
Trigger: ATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCAC...ATGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCGTGCTGTCCTTTGCCTaGGCTCTTACCGTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLVLSFA*ALTVSY
Trigger: ATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCAC...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGTGGATGTGGGGGCGTaGGGTGACTCCTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPVDVGA*GDSWLG
Trigger: TCCAAGCCAGGAGTCACCCAACGCCCCCACATCCAC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCCTTGACCAGGGGATCTaGGCTTCTGGGGTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSLDQGI*ASGVRS
Trigger: AGACCTCACCCCAGAAGCCAAGATCCCCTGGTCAAG...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAG +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGCVRNV*FRVSYK
Trigger: CTTGTACGAGACTCGGAACAAAACGTTCCTGACACA...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATTGGTGGGGCTCCATGTaGATCTGTGCTGCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYWWGSM*ICAACP
Trigger: AGGGCAGGCAGCACAGATCAACATGGAGCCCCACCA...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp ACTCTTGTCAATGAGAAATCCCTCAGCCCCTTTTGTCTTGGGTCTCACAGCTCCCTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: TLVNEKSLSPFCLGSHSSLWQRC*APASVS
Trigger: GCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAG...GGAGCTGTGAGACCCAAGACAAAAGGGGCTGAGGGATTTCTCATTGACAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFPTSSR*FCCRSS
Trigger: GCTAGACCTGCAGCAGAACAACCTGGATGACGTTGG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCCGAGTCTCTGCCGCTaGAGTGAGGATGTGCTATTA +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPPSLCR*SEDVLL
Trigger: TAATAGCACATCCTCACTCAAGCGGCAGAGACTCGG...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGTGAGACAGCTCCTCCGGGTACCAGTCTCGACTCCTCCGGGCAGCGACAACAATACAAGTTCTTTTCTTaGTCAACTACCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GETAPPGTSLDSSGQRQQYKFFS*STTSVA
Trigger: GGCTACTGAGGTAGTTGACAAAGAAAAGAACTTGTA...TTGTTGTCGCTGCCCGGAGGAGTCGAGACTGGTACCCGGAGGAGCTGTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTGCTCCAGGCTCAGCCTaGATGTCCAGCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIAPGSA*MSSRGP
Trigger: AGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGC...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGAATGGAGCAGTCACTaGGGATCAGGTAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPEWSSH*GSGRGG
Trigger: TCCACCTCTACCTGATCCCAAGTGACTGCTCCATTC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGTCAGCGGGGGTGGCTaGTGGATTCGCACAAACTGG +
Preference number: 5 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYVSGGG*WIRTNW
Trigger: CCAGTTTGTGCGAATCCACAAGCCACCCCCGCTGAC...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCCTTTTGTCTTGGGTCTCACAGCTCCAGAAGTGAGCCGGGCCAGAACGAAGCCAGAGTCTCATCTTTCTaGTCTTTCACTTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PFCLGSHSSRSEPGQNEARVSSF*SFTCSL
Trigger: CAGGCTGCAAGTGAAAGACAAGAAAGATGAGACTCT...GGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCTGTGAGACCCAAGACAAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGAGAGTCTCATCTTTCTaGTCTTTCACTTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVRVSSF*SFTCSL
Trigger: CAGGCTGCAAGTGAAAGACAAGAAAGATGAGACTCT...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCACCTGTCCATGCAGTTaGTCCAAGACAACCTCCACC +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPTCPCS*SKTTST
Trigger: GGTGGAGGTTGTCTTGGACAAACTGCATGGACAGGT...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCCAGATGGCAACTTGTTaGCAGAGAAAGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: LLFLFAPGWDPEGSRLGCQMATC*QRKKLR
Trigger: TCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTG...GCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp TGGGGGCGTTCCTACCACCGCTGCCCATGGGGGCCTGCCTTTCTCTaGTTTCTCTCTCTCTCTTTCTCTGATTTCTGTGTAGTAAATTCC +
Preference number: 5 (lower is better)
Translates to: WGRSYHRCPWGPAFL*FLSLSFSDFCVVNS
Trigger: GGAATTTACTACACAGAAATCAGAGAAAGAGAGAGAGAGAAATCAGAGAAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGAACGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 90 bp ATGGTGGGGCTCCATGTTGATCTGTGCTGCCTGCCCTCAATCAGCTaGAGCTTCTTCACGTGGCGGCTGAATTTAATGCAGAAAGTGCAC +
Preference number: 5 (lower is better)
Translates to: MVGLHVDLCCLPSIS*SFFTWRLNLMQKVH
Trigger: GTGCACTTTCTGCATTAAATTCAGCCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAACATGGAGCCCCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 90 bp CTAACTTCGTCCCAGCCCAGGGACTTCAGGACCACTAGACATCCCTaGCAGGACAGATACTGGAAGATCCCAAGCTACAACTTCACACTC +
Preference number: 5 (lower is better)
Translates to: LTSSQPRDFRTTRHP*QDRYWKIPSYNFTL
Trigger: GAGTGTGAAGTTGTAGCTTGGGATCTTCCAGTATCTGTCCTGTCAGGGATGTCTAGTGGTCCTGAAGTCCCTGGGCTGGGACGAAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 90 bp CACGCACAAGAGTTCCACCGGTACTACCTCTGGGGAGCTTTCCTCTaGAATCTCAGCAATTGGGAAGATCTTGCTCACGTCCAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: HAQEFHRYYLWGAFL*NLSNWEDLAHVQEF
Trigger: AAACTCCTGGACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTGGAACTCTTGTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS GCA 90 bp CAGTTCCTGAAGAGGCAAAGAGTTGAGTTGCCACCCTGTTCATCTTaGATGGAAGGTCTTTCCCCACCTGACACCTTCTTGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QFLKRQRVELPPCSS*MEGLSPPDTFLALL
Trigger: AAGCAGGGCCAAGAAGGTGTCAGGTGGGGAAAGACCTTCCATGCAAGATGAACAGGGTGGCAACTCAACTCTTTGCCTCTTCAGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 90 bp CATGGCTGCCGAATTCCTCTCCTGCCAACTTCTAATTTATATGCGTaGCCTGGCTGGGAGAAGGGAAGTCAAGCCAGGAATCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: HGCRIPLLPTSNLYA*PGWEKGSQARNLPF
Trigger: AAAGGGGAGATTCCTGGCTTGACTTCCCTTCTCCCAGCCAGGGCACGCATATAAATTAGAAGTTGGCAGGAGAGGAATTCGGCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 90 bp AGGACTCAAGGGTCAAGGGCTGGTGTTGATACTTCAGCTGCTGAGTaGCAGGAGTCCCTTTTTGCTGCCCTTCTCCCAGAGTTCCATAAT +
Preference number: 5 (lower is better)
Translates to: RTQGSRAGVDTSAAE*QESLFAALLPEFHN
Trigger: ATTATGGAACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGCCACTCAGCAGCTGAAGTATCAACACCAGCCCTTGACCCTTGAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS CCA 90 bp CACCATCAAAGACTGTGCCCTGTTAGCCTTTCCCAGGCCGCATTCTaGGCCTCACCCTGCAGCAAAACAGACTTGTTCCCTTTAGAATGT +
Preference number: 5 (lower is better)
Translates to: HHQRLCPVSLSQAAF*ASPCSKTDLFPLEC
Trigger: ACATTCTAAAGGGAACAAGTCTGTTTTGCTGCAGGGTGAGGCCCAGAATGCGGCCTGGGAAAGGCTAACAGGGCACAGTCTTTGATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGTGCTGTCCTTTGCCTaGGCTCTTACCGTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSVLSFA*ALTVSY
Trigger: ATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCAC...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTGGGTGACTCCTGGCTaGGAGACTCATGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLPQSQGPEIIQLKNWCIWVTPG*ETHGLG
Trigger: CCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCA...AATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CTGGGGCCCCCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: LGPPVASLAWTHNAQQRHSSLFD*TNLKAL
Trigger: TAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCT...ATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGGGGGCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGCCACCAGATGAGGCTCTATGAGGTCTGCAGGGGTCTTGCCAGCTCCAGATGGTACAAGTTCTTTTCTTaGTCAACTACCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GHQMRLYEVCRGLASSRWYKFFS*STTSVA
Trigger: GGCTACTGAGGTAGTTGACAAAGAAAAGAACTTGTA...CCATCTGGAGCTGGCAAGACCCCTGCAGACCTCATAGAGCCTCATCTGGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTGGTCAAGGGCTGGTGTaGATACTTCAGCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSGQGLV*ILQLLS
Trigger: ACTCAGCAGCTGAAGTATCAACACCAGCCCTTGACC...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCTGCTGTGCAGATGGCAACTTGTTaGCAGAGAAAGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: YSSLRLDGIRRALGLAAVQMATC*QRKKLR
Trigger: TCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTG...CACAGCAGCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GACAACAAAGTCTGCGGTCTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTTCCCGCACGAACTCTaGTCAATGAGAAATCCCTCA +
Preference number: 5 (lower is better)
Translates to: DNKVCGLLRPPCHPPSPLFPHEL*SMRNPS
Trigger: TGAGGGATTTCTCATTGACAAGAGTTCGTGCGGGAA...GAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAGACCGCAGACTTTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAACTTGACCAGGGGATCTaGGCTTCTGGGGTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LEGKPDGNLFAEKETETQLDQGI*ASGVRS
Trigger: AGACCTCACCCCAGAAGCCAAGATCCCCTGGTCAAG...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACCTGCCTGGCCAGTGTaGACTTCCCAATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPPAWPV*TSQFQQ
Trigger: CTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAGG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCTCTAGGCTTGGCAAAGGCTCTAATTGCTaGCCTTTCATCTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: SLLFLFAPGWDPEGSRLGKGSNC*PFICEI
Trigger: TATTTCACAGATGAAAGGCAAGCAATTAGAGCCTTT...GCCAAGCCTAGAGCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTA +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPRAQSS*FDLTNL
Trigger: TAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCT...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTCAGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: SPKPISQTHLRSTQASLSEMGHH*CQERFV
Trigger: AACAAAACGTTCCTGACACAAGTGATGGCCCATTTC...TGACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTAGGTTTCTGGTGACCTaGAGGACGGAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSRFLVT*RTEKRI
Trigger: GATTCTCTTCTCCGTCCTCAAGGTCACCAGAAACCT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLWQRC*APASVS
Trigger: GCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATGCAGTCGCTGTAGCTaGCAGCTCGGCTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPCSRCS*QLGCLS
Trigger: ACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGCA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCATCTCATCACTCAGAGTaGTCTGGTCCAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPSHHSE*SGPAPG
Trigger: GCCTGGGGCTGGACCAGACAACTCTGAGTGATGAGA...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCCTGCAATCTCAGCAATaGGGAAGATCTTGCTCACGT +
Preference number: 5 (lower is better)
Translates to: RGKWFHVPPIPLCAWMGSLQSQQ*GRSCSR
Trigger: ACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAG...GGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGCTCCAGGCTCAGCCTaGATGTCCAGCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLAPGSA*MSSRGP
Trigger: AGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCTCACCCTGTGACACAGCCAGAGGCAAATGGTTCCATGTCCCTCCTATTCCTCAGAGTCTCATCTTTCTaGTCTTTCACTTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: AHPVTQPEANGSMSLLFLRVSSF*SFTCSL
Trigger: CAGGCTGCAAGTGAAAGACAAGAAAGATGAGACTCT...GAGGAATAGGAGGGACATGGAACCATTTGCCTCTGGCTGTGTCACAGGGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS GCA 90 bp TTGATGGGAAACCTGCAAGTGTATTGCAACCTCTACACTAGGATGTaGCTGGATAAGCCTAGTCACCTGCTGAAGGTGCTGTGGCACTTC +
Preference number: 5 (lower is better)
Translates to: LMGNLQVYCNLYTRM*LDKPSHLLKVLWHF
Trigger: GAAGTGCCACAGCACCTTCAGCAGGTGACTAGGCTTATCCAGGCACATCCTAGTGTAGAGGTTGCAATACACTTGCAGGTTTCCCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 90 bp TCTCTCTCTCCCCCTCATCACTTAACAGGCCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGCCATGTATTCCATATGCTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: SLSPPHHLTGPIGNV*LMPQTGHVFHMLLA
Trigger: CGCTAGAAGCATATGGAATACATGGCCTGTTTGGGGCATCAACCACACGTTTCCTATTGGGCCTGTTAAGTGATGAGGGGGAGAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 90 bp TCTGGTTCTCACAGCTTAACCACCTCAGCTAAAAGGGCTTCCAGTTaGCTGGATGAGGAGAAGATGGAACCCTCATCCGTGATGTTGAGA +
Preference number: 5 (lower is better)
Translates to: SGSHSLTTSAKRASS*LDEEKMEPSSVMLR
Trigger: TCTCAACATCACGGATGAGGGTTCCATCTTCTCCTCATCCAGCCAACTGGAAGCCCTTTTAGCTGAGGTGGTTAAGCTGTGAGAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS CCA 90 bp AGAGGGTCTCGGGCAGAACCATGCAAAGGCTTATTGGGGAGGAGCTaGGTGTCAGTGAGGAGTGCAGGTGTTAAAAATGCTTTAGTAACT +
Preference number: 5 (lower is better)
Translates to: RGSRAEPCKGLLGRS*VSVRSAGVKNALVT
Trigger: AGTTACTAAAGCATTTTTAACACCTGCACTCCTCACTGACACCCAGCTCCTCCCCAATAAGCCTTTGCATGGTTCTGCCCGAGACCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACTGGAGTGCGCTTTATaGGCGAGCAGAAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLECAL*ASRSWN
Trigger: GTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACCCAGGTGGGGTTCACTaGGGCTGTAGGGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNPGGVH*GCRGMR
Trigger: CCTCATTCCCCTACAGCCCAAGTGAACCCCACCTGG...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTTCAGGCCAGCTTCTCTaGACCAGGGGATCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGISGQLL*TRGSWL
Trigger: AAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTGA...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTCCTGCCTGGCCAGTGTaGACTTCCCAATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSPAWPV*TSQFQQ
Trigger: CTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAGG...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTA +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFRAQSS*FDLTNL
Trigger: TAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTAGGGATGGGGTGCTCTaGAAGAATACCCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFRDGVL*KNTHLQ
Trigger: TTGAAGATGGGTATTCTTCAAGAGCACCCCATCCCT...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTAGGGATGGGGTGCTCTaGAAGAATACCCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSRDGVL*KNTHLQ
Trigger: TTGAAGATGGGTATTCTTCAAGAGCACCCCATCCCT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TGTAGATCTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: CRSSCTKPRIHVASHAEPEMGHH*CQERFV
Trigger: AACAAAACGTTCCTGACACAAGTGATGGCCCATTTC...GGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAGATCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCCCAGGCGTATGAGTTaGCAGGCAGGATGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVPRRMS*QAGCLS
Trigger: GCTCAGGCATCCTGCCTGCAAACTCATACGCCTGGG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTTCTCATCACTCAGAGTaGTCTGGTCCAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSSHHSE*SGPAPG
Trigger: GCCTGGGGCTGGACCAGACAACTCTGAGTGATGAGA...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACGTCCACATGGCCCCCTaGGAGAGCCACAAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNVHMAP*ESHKVR
Trigger: CCTCACTTTGTGGCTCTCCAAGGGGGCCATGTGGAC...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCTTGCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGAATGGAGCAGTCACTaGGGATCAGGTAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SCSSPTKAGIQPFEHLAYEWSSH*GSGRGG
Trigger: TCCACCTCTACCTGATCCCAAGTGACTGCTCCATTC...ATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAACTCCTGGCGTCTCTGTaGCACCTGAGGTTCCACGGC +
Preference number: 5 (lower is better)
Translates to: SSKIKPPTIPRSRDNTAQLLASL*HLRFHG
Trigger: GCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAG...TTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS CCA 90 bp TTCCCAATTCCAGCAGCCCCCTGCAGTATGACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCAAATAAGTCTCTGATCTCAATTAAA +
Preference number: 5 (lower is better)
Translates to: FPIPAAPCSMTMRGS*VSRPGPNKSLISIK
Trigger: TTTAATTGAGATCAGAGACTTATTTGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAATTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGCTGGAGTGCGCTTTATaGGCGAGCAGAAGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LVLEGKPDGNLFAEKETELECAL*ASRSWN
Trigger: GTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAG...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTCTTGACCAGGGGATCTaGGCTTCTGGGGTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLLDQGI*ASGVRS
Trigger: AGACCTCACCCCAGAAGCCAAGATCCCCTGGTCAAG...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACCTGCCTGGCCAGTGTaGACTTCCCAATTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRPAWPV*TSQFQQ
Trigger: CTGCTGGAATTGGGAAGTCAACACTGGCCAGGCAGG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCTCACCTAAGCCCATTTCTCAGACCCACCTGCGGTCTACTCAGGCCTCCTTGTAAAGGCTCTAATTGCTaGCCTTTCATCTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: PHLSPFLRPTCGLLRPPCKGSNC*PFICEI
Trigger: TATTTCACAGATGAAAGGCAAGCAATTAGAGCCTTT...ACAAGGAGGCCTGAGTAGACCGCAGGTGGGTCTGAGAAATGGGCTTAGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AATGGTTCCATGTCCCTCCTATTCCTCTTTGCGCCTGGATGGGATCCGGAGGGCAAAGGCTCTAATTGCTaGCCTTTCATCTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: NGSMSLLFLFAPGWDPEGKGSNC*PFICEI
Trigger: TATTTCACAGATGAAAGGCAAGCAATTAGAGCCTTT...GCCCTCCGGATCCCATCCAGGCGCAAAGAGGAATAGGAGGGACATGGAACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFEMGHH*CQERFV
Trigger: AACAAAACGTTCCTGACACAAGTGATGGCCCATTTC...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGACTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRLWQRC*APASVS
Trigger: GCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAG...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGTGCAGTCGCTGTAGCTaGCAGCTCGGCTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVCSRCS*QLGCLS
Trigger: ACTGAGACAGCCGAGCTGCAAGCTACAGCGACTGCA...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTGAATGGAGCAGTCACTaGGGATCAGGTAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGIEWSSH*GSGRGG
Trigger: TCCACCTCTACCTGATCCCAAGTGACTGCTCCATTC...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATCCCTCTCTGGCTTCATaGGTACTGCCGCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNPSLAS*VLPQAA
Trigger: AGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGG...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGCTCCGCCAGCCATCTaGTTCTGTGTTCCTCAGATT +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPAPPAI*FCVPQI
Trigger: AATCTGAGGAACACAGAACAAGATGGCTGGCGGAGC...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269280.8
CDS-3UTR CAA 90 bp CTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGACCCAAACCTGTCCATGCAGTTaGTCCAAGACAACCTCCACC +
Preference number: 5 (lower is better)
Translates to: LEGKPDGNLFAEKETETQTCPCS*SKTTST
Trigger: GGTGGAGGTTGTCTTGGACAAACTGCATGGACAGGT...TTGGGTCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGGCAGGAGTCCCTTTTaGCTGCCCTTCTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLGRSPF*LPFSQS
Trigger: ACTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGCC...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp CATGGCCAGAGCCTACTAGGTAGTGGTAGGTACTCAGGTTTTTGCTaGATGAATGATGCAGTGAATAACGGCAGCAGCAAACTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: HGQSLLGSGRYSGFC*MNDAVNNGSSKLWF
Trigger: GAACCAGAGTTTGCTGCTGCCGTTATTCACTGCATCATTCATTCAGCAAAAACCTGAGTACCTACCACTACCTAGTAGGCTCTGGCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS TCA 90 bp GCAGGTGTTAAAAATGCTTTAGTAACTGCAGGGTCCTTTGCATATTaGGAAGATGTGAGGCTAAATCCGGAGCTCAGACAGCAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: AGVKNALVTAGSFAY*EDVRLNPELRQQRP
Trigger: GGGCCTCTGCTGTCTGAGCTCCGGATTTAGCCTCACATCTTCTCAATATGCAAAGGACCCTGCAGTTACTAAAGCATTTTTAACACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACCATGGTCTGGGGAGCTaGGAAGAGCTTGGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNHGLGS*EELGRG
Trigger: TCCTCTACCAAGCTCTTCCAAGCTCCCCAGACCATG...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGTCAGGCCAGCTTCTCTaGACCAGGGGATCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVSGQLL*TRGSWL
Trigger: AAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTGA...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCTCTTCACCCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTA +
Preference number: 5 (lower is better)
Translates to: ALHPQKQASSLLSISHMIRAQSS*FDLTNL
Trigger: TAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCT...AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGGGTGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATGCATCCGTGAGCACATaGAAGCTCAGGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNASVST*KLRSSS
Trigger: CGAGCTGGACCTGAGCTTCAATGTGCTCACGGATGC...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVPTSSR*FCCRSS
Trigger: GCTAGACCTGCAGCAGAACAACCTGGATGACGTTGG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTCCGAGTCTCTGCCGCTaGAGTGAGGATGTGCTATTA +
Preference number: 5 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSPSLCR*SEDVLL
Trigger: TAATAGCACATCCTCACTCAAGCGGCAGAGACTCGG...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp ATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAACAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: ITLVLEGKPDGNLFAEKEQLCCG*ISPRNW
Trigger: CCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTG...TTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGGGTCAAGGGCTGGTGTaGATACTTCAGCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEGQGLV*ILQLLS
Trigger: ACTCAGCAGCTGAAGTATCAACACCAGCCCTTGACC...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CTTCCTGTACAAAGCCAAGAATCCACGTGGCCTCCCACGCTGAACCCCAATTTTCAGATGGCAACTTGTTaGCAGAGAAAGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: LPVQSQESTWPPTLNPNFQMATC*QRKKLR
Trigger: TCTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTG...AAAATTGGGGTTCAGCGTGGGAGGCCACGTGGATTCTTGGCTTTGTACAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS CCA 90 bp AAGAGCTCCATGTCTGTTTCTACACACATGCCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGGAACGTTTTGTTCCGAGTCTCGTAC +
Preference number: 5 (lower is better)
Translates to: KSSMSVSTHMPISSK*AITCVRNVLFRVSY
Trigger: GTACGAGACTCGGAACAAAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAGACATGGAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp AAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGTCAGGCCAGCTTCTCTaGACCAGGGGATCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: KIKPPTIPRSRDNTAQELSGQLL*TRGSWL
Trigger: AAGCCAAGATCCCCTGGTCAAGAGAAGCTGGCCTGA...CAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp CCTGTGGCATCCCTGGCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: PVASLAWTHNAQQRHHQSSSLFD*TNLKAL
Trigger: TAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCT...ACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGCCAGGGATGCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCCGAGTCTCTGCCGCTaGAGTGAGGATGTGCTATTA +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVPSLCR*SEDVLL
Trigger: TAATAGCACATCCTCACTCAAGCGGCAGAGACTCGG...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCACTGCAATCTCAGCAATaGGGAAGATCTTGCTCACGT +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPLQSQQ*GRSCSR
Trigger: ACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAG...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGGAATGGAGCAGTCACTaGGGATCAGGTAGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVEWSSH*GSGRGG
Trigger: TCCACCTCTACCTGATCCCAAGTGACTGCTCCATTC...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGGGTCAAGGGCTGGTGTaGATACTTCAGCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVGQGLV*ILQLLS
Trigger: ACTCAGCAGCTGAAGTATCAACACCAGCCCTTGACC...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS TCA 90 bp TTTATATCCATCCCCTTTCCTAAATCCCAGCTAAGACAGAACTCTTaGTTCCCCACTGTCTTCCAAACATGCTCCCTTTCCAGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: FISIPFPKSQLRQNS*FPTVFQTCSLSSFP
Trigger: GGGGAAACTGGAAAGGGAGCATGTTTGGAAGACAGTGGGGAATCAAGAGTTCTGTCTTAGCTGGGATTTAGGAAAGGGGATGGATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 90 bp TGCAGAAAGTGCACACTAAGAGCTCCATGTCTGTTTCTACACACATaGCCATTTCTTCGAAATGGGCCATCACTTGTGTCAGGAACGTTT +
Preference number: 5 (lower is better)
Translates to: CRKCTLRAPCLFLHT*PFLRNGPSLVSGTF
Trigger: AAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAGACATGGAGCTCTTAGTGTGCACTTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS-3UTR CAA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGAGGGATGGGGTGCTCTaGAAGAATACCCATCTTCAA +
Preference number: 5 (lower is better)
Translates to: LVLEGKPDGNLFAEKETERDGVL*KNTHLQ
Trigger: TTGAAGATGGGTATTCTTCAAGAGCACCCCATCCCT...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCACAAAAGCAGGCATCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAAATAGGAAACGTGTGGTaGATGCCCCAAACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: PQKQASSLLSISHMIKNKIGNVW*MPQTGH
Trigger: ATGGCCTGTTTGGGGCATCAACCACACGTTTCCTAT...TTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGATGCCTGCTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGATAGGAAACGTGTGGTaGATGCCCCAAACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVIGNVW*MPQTGH
Trigger: ATGGCCTGTTTGGGGCATCAACCACACGTTTCCTAT...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATGGACACATAATGCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGAGGTTTCTGGTGACCTaGAGGACGGAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: AWTHNAQQRHHQSSITLVRFLVT*RTEKRI
Trigger: GATTCTCTTCTCCGTCCTCAAGGTCACCAGAAACCT...CACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGCATTATGTGTCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACAGGTTTCTGGTGACCTaGAGGACGGAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNRFLVT*RTEKRI
Trigger: GATTCTCTTCTCCGTCCTCAAGGTCACCAGAAACCT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS GCA 90 bp ACTCTGATGATCCCTGTACTGAAATCAACCATCACCTTCAGACATTaGTCTTTTCCCAATTTTCCACAGAAGGATGAGGACACAACTGAG +
Preference number: 5 (lower is better)
Translates to: TLMIPVLKSTITFRH*SFPNFPQKDEDTTE
Trigger: CTCAGTTGTGTCCTCATCCTTCTGTGGAAAATTGGGAAAAGAGCAATGTCTGAAGGTGATGGTTGATTTCAGTACAGGGATCATCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAG +
Preference number: 5 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLCVRNV*FRVSYK
Trigger: CTTGTACGAGACTCGGAACAAAACGTTCCTGACACA...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCREMGHH*CQERFV
Trigger: AACAAAACGTTCCTGACACAAGTGATGGCCCATTTC...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTCAGGCATCCAGCCTTTaGAGCATCTCGCATATGATT +
Preference number: 5 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTAQASSL*SISHMI
Trigger: AATCATATGCGAGATGCTCAAAAGGCTGGATGCCTG...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AGTAAACAGAGATGGCCGGTGGGTAAATATCTTGCCAAGGTGGTTCCTGGTATTAAAGGCTCTAATTGCTaGCCTTTCATCTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: SKQRWPVGKYLAKVVPGIKGSNC*PFICEI
Trigger: TATTTCACAGATGAAAGGCAAGCAATTAGAGCCTTT...AATACCAGGAACCACCTTGGCAAGATATTTACCCACCGGCCATCTCTGTTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544378.6
CDS-3UTR CAA 90 bp GCCCAGCAAAGGCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAAAAGGCTCTAATTGCTaGCCTTTCATCTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: AQQRHHQSSITLVLEGKPKGSNC*PFICEI
Trigger: TATTTCACAGATGAAAGGCAAGCAATTAGAGCCTTT...TGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGCCTTTGCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp CCCACAATCCCAAGGTCCAGAGATAATACAGCTCAAGAATTGGTGCATTTCTCTAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: PTIPRSRDNTAQELVHFSSSLFD*TNLKAL
Trigger: TAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCT...AGAGAAATGCACCAATTCTTGAGCTGTATTATCTCTGGACCTTGGGATTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp TTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACTGAGTACAAGTTCTTTTCTTaGTCAACTACCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: LVLEGKPDGNLFAEKETEYKFFS*STTSVA
Trigger: GGCTACTGAGGTAGTTGACAAAGAAAAGAACTTGTA...CTCAGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TCCAGCCTTTTGAGCATCTCGCATATGATTAAGAACAAATCCTTCAAAGACCTGAGAGTCTCATCTTTCTaGTCTTTCACTTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSLLSISHMIKNKSFKDLRVSSF*SFTCSL
Trigger: CAGGCTGCAAGTGAAAGACAAGAAAGATGAGACTCT...CAGGTCTTTGAAGGATTTGTTCTTAATCATATGCGAGATGCTCAAAAGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS TCA 90 bp ATTCATATACTTTTCTCCATCTCCCTCGCTACCTTCCTAGTCAAGTaGCCTTCAACTGTAGCTTGCAGTATTGCAACAGCCTTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: IHILFSISLATFLVK*PSTVACSIATAFCF
Trigger: AAAACAAAAGGCTGTTGCAATACTGCAAGCTACAGTTGAAGGTCACTTGACTAGGAAGGTAGCGAGGGAGATGGAGAAAAGTATATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS-3UTR CAA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNSSLFD*TNLKAL
Trigger: TAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp ATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATACAGCTAATACAGCTCAAGAATaGGTGCATTTCTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: ISSKIKPPTIPRSRDNTANTAQE*VHFSAF
Trigger: GAAGGCAGAGAAATGCACCAATTCTTGAGCTGTATT...AGCTGTATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS-3UTR CAA 90 bp AAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAAAACCAGATGGCAACTaGTTTGCAGAGAAAGAAACT +
Preference number: 5 (lower is better)
Translates to: KFHYFSAGRQTRWQLVCRKPDGN*FAEKET
Trigger: AGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTT...TCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp TACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTGTTTGCAGAGAAAGAAACAAACCAGATGGCAACTaGTTTGCAGAGAAAGAAACT +
Preference number: 5 (lower is better)
Translates to: YFSAGRQTRWQLVCRERNKPDGN*FAEKET
Trigger: AGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTT...GTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GCATCATCAAAGTTCCATTACTTTAGTGCTGGAAGGCAAACCAGATGGCAACTTAAACCAGATGGCAACTaGTTTGCAGAGAAAGAAACT +
Preference number: 5 (lower is better)
Translates to: ASSKFHYFSAGRQTRWQLKPDGN*FAEKET
Trigger: AGTTTCTTTCTCTGCAAACAAGTTGCCATCTGGTTT...AAGTTGCCATCTGGTTTGCCTTCCAGCACTAAAGTAATGGAACTTTGATGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS-3UTR CAA 90 bp GGCAAAATCAGTAGTAAAATAAAGCCTCCCACAATCCCAAGGTCCAGAGATAATTACAAGTTCTTTTCTTaGTCAACTACCTCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: GKISSKIKPPTIPRSRDNYKFFS*STTSVA
Trigger: GGCTACTGAGGTAGTTGACAAAGAAAAGAACTTGTA...ATTATCTCTGGACCTTGGGATTGTGGGAGGCTTTATTTTACTACTGATTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262467.10
CDS TCA 90 bp CTGTTAGCTGATATTTCTTGGAACTCTGTGGGAAGTCTTTGGAGGTaGCATAAAATCATACTTTGTGATTACTATCTTCTATGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LLADISWNSVGSLWR*HKIILCDYYLLWEA
Trigger: GGCTTCCCATAGAAGATAGTAATCACAAAGTATGATTTTATGTCACCTCCAAAGACTTCCCACAGAGTTCCAAGAAATATCAGCTAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571307.1
CDS GCA 72 bp TCCTGGGCTTGGGCGCACAGTGACCTCAGCCCCATCTaGTCCCAGGTATGGAGGGCTAGGTCCCAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SWAWAHSDLSPI*SQVWRARSQAR
Trigger: GCGGGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTCACTGTGCGCCCAAGCCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GCGCACAGTGACCTCAGCCCCATCTGCTCCCAGGTATaGAGGGCTAGGTCCCAGGCCCGCTGCTCCCCATAC +
Preference number: 6 (lower is better)
Translates to: AHSDLSPICSQV*RARSQARCSPY
Trigger: GTATGGGGAGCAGCGGGCCTGGGACCTAGCCCTCCATACCTGGGAGCAGATGGGGCTGAGGTCACTGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CCCAGCAGTGCATCCGCCGGCTGTGGCTGGCTCCAGTaGAGACAGAGCTCAGAACTCGGCTCCTGCAAGACC +
Preference number: 6 (lower is better)
Translates to: PSSASAGCGWLQ*RQSSELGSCKT
Trigger: GGTCTTGCAGGAGCCGAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCACTGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CCCAGCTCCCCAGCACTGCTGTGGATGTGGGGGCGTTaGGTGACTCCTGGCTTGGAGACTCATGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: PSSPALLWMWGR*VTPGLETHGLG
Trigger: CCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCACAGCAGTGCTGGGGAGCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CCCCAGCAAACTGCCCAGCAGTGCATCCGCCGGCTGTaGCTGGCTCCAGTGCAGACAGAGCTCAGAACTCGG +
Preference number: 6 (lower is better)
Translates to: PQQTAQQCIRRL*LAPVQTELRTR
Trigger: CCGAGTTCTGAGCTCTGTCTGCACTGGAGCCAGCCACAGCCGGCGGATGCACTGCTGGGCAGTTTGCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp GGTGCTGTGGCACTTCTAGCCCAATGCAGGGTCAGCTaGCTGCCCCACCCTGAGAGGCTTCTGGGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: GAVALLAQCRVS*LPHPERLLGAH
Trigger: GTGAGCTCCCAGAAGCCTCTCAGGGTGGGGCAGGCAGCTGACCCTGCATTGGGCTAGAAGTGCCACAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp TGGGCTTTCAGAACCCAGAGTGGAGCCCCGGGCTGCTaGCTCCCAGGTTTCTTCAGACCTCTCCAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: WAFRTQSGAPGC*LPGFFRPLQAL
Trigger: CAGGGCCTGGAGAGGTCTGAAGAAACCTGGGAGCCAGCAGCCCGGGGCTCCACTCTGGGTTCTGAAAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572143.1
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CTCTCTGAGCCCTGGGTGCACCCCGCCGGCAATTCATaGATCCAGGGCATTAGCACTGCGGTGGAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: LSEPWVHPAGNS*IQGISTAVEVG
Trigger: ACCCACCTCCACCGCAGTGCTAATGCCCTGGATCCATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp TCAGCCCAAAGGCAAGGTCCTTGCAGTCCTCAGCTGTaGGGCCACAGCCAGCCAACCGCAGGGTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: SAQRQGPCSPQL*GHSQPTAGSPG
Trigger: TCCTGGAGACCCTGCGGTTGGCTGGCTGTGGCCTCACAGCTGAGGACTGCAAGGACCTTGCCTTTGGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CCCCATACTGAGCCACCAGGTACGAGGCCACCTCCATaGCACTCGTCTTCTCTGGCTGAGCGGGTGTCTCAC +
Preference number: 6 (lower is better)
Translates to: PHTEPPGTRPPP*HSSSLAERVSH
Trigger: GTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGTACCTGGTGGCTCAGTATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CAGGTACGAGGCCACCTCCATGCCACTCGTCTTCTCTaGCTGAGCGGGTGTCTCACCCGAAGAGCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: QVRGHLHATRLL*LSGCLTRRAPG
Trigger: TCCAGGAGCTCTTCGGGTGAGACACCCGCTCAGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GCAGGGTCAGCTGCCTGCCCCACCCTGAGAGGCTTCTaGGAGCTCACATCCAATGCTGATCATCCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: AGSAACPTLRGF*ELTSNADHPRA
Trigger: AGCACGGGGATGATCAGCATTGGATGTGAGCTCCCAGAAGCCTCTCAGGGTGGGGCAGGCAGCTGACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp TGCCTGAGCCCCTCACAGAGCAGTCGCACGCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGCTCCTTCAGGCTGGGGCTGGCACTA +
Preference number: 6 (lower is better)
Translates to: CLSPSQSSRTPTSSR*FCCRSSSFRLGLAL
Trigger: TAGTGCCAGCCCCAGCCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGACGTTGGCGTGCGACTGCTCTGTGAGGGGCTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CAGAGCAGTCGCACGCCAACGTCATCCAGGTTGTTCTaGTGCAGGTCTAGCTCCTTCAGGCTGGGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: QSSRTPTSSRLF*CRSSSFRLGLA
Trigger: TGCCAGCCCCAGCCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGACGTTGGCGTGCGACTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp AGCTCCAGGCTCAGCCTTGATGTCCAGCAGAGGCCCTaGCACCATCCAGCTGTGCTGTGGGTTGATCTCACC +
Preference number: 6 (lower is better)
Translates to: SSRLSLDVQQRP*HHPAVLWVDLT
Trigger: GGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGACATCAAGGCTGAGCCTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp TCACCTGCTGAAGGTGCTGTGGCACTTCTAGCCCAATaGAGGGTCAGCTGCCTGCCCCACCCTGAGAGGCTT +
Preference number: 6 (lower is better)
Translates to: SPAEGAVALLAQ*RVSCLPHPERL
Trigger: AAGCCTCTCAGGGTGGGGCAGGCAGCTGACCCTGCATTGGGCTAGAAGTGCCACAGCACCTTCAGCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp GCTACCCACCCCAGGCTTGCTCACCATCAAAGACTGTaGCCTGTTAGCCTTTCCCAGGCCGCATTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ATHPRLAHHQRL*PVSLSQAAFWA
Trigger: GGCCCAGAATGCGGCCTGGGAAAGGCTAACAGGGCACAGTCTTTGATGGTGAGCAAGCCTGGGGTGGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp TCAGGCAGCTGTCTCAAAACCCTTCTCTCTGAGCCCTaGGTGCACCCCGCCGGCAATTCATGGATCCAGGGC +
Preference number: 6 (lower is better)
Translates to: SGSCLKTLLSEP*VHPAGNSWIQG
Trigger: GCCCTGGATCCATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTGAGACAGCTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GTCCAGCAGAGGCCCTGCCACCATCCAGCTGTGCTGTaGGTTGATCTCACCCAGGAACTGGTCCCACACACA +
Preference number: 6 (lower is better)
Translates to: VQQRPCHHPAVL*VDLTQELVPHT
Trigger: TGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CTCCTGGCGTCTCTGTTGCACCTGAGGTTCCACGGCTaGCTGGTGTTCCTTCCTGGTTTCACCAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLASLLHLRFHG*LVFLPGFTKAS
Trigger: GGAGGCCTTGGTGAAACCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000613500.4
CDS CAA 72 bp CCCTCACAGAGCAGTCGCACGCCAACGTCATCCAGGTaGTTCTGCTGCAGGTCTAGCTCCTTCAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: PSQSSRTPTSSR*FCCRSSSFRLG
Trigger: CCCCAGCCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGACGTTGGCGTGCGACTGCTCTGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp AGCAGTCGCACGCCAACGTCATCCAGGTTGTTCTGCTaGAGGTCTAGCTCCTTCAGGCTGGGGCTGGCACTA +
Preference number: 6 (lower is better)
Translates to: SSRTPTSSRLFC*RSSSFRLGLAL
Trigger: TAGTGCCAGCCCCAGCCTGAAGGAGCTAGACCTGCAGCAGAACAACCTGGATGACGTTGGCGTGCGACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTGCTaGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCT +
Preference number: 6 (lower is better)
Translates to: ALSGFIGTAAGC*ALVSPGVSVAP
Trigger: AGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS CCA 72 bp CTACTCAGGCCTCCTTGTCATCCACCAAGCCCTCTCTaGCTTCATTGGTACTGCCGCAGGCTGCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: LLRPPCHPPSPL*LHWYCRRLLGT
Trigger: AGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGGCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS CAA 72 bp CTGCTGTGGATGTGGGGGCGTTGGGTGACTCCTGGCTaGGAGACTCATGGTCTGGGGAGCTTGGAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LLWMWGRWVTPG*ETHGLGSLEEL
Trigger: AAGCTCTTCCAAGCTCCCCAGACCATGAGTCTCCAAGCCAGGAGTCACCCAACGCCCCCACATCCACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp CACGCATTAAACCCCAAGCATGGGGGCCTACTGCCATTGCACAGGTaGCACTTCCAGGAAGCTGGCCCTACTCACACCCTATCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: HALNPKHGGLLPLHR*HFQEAGPTHTLSQA
Trigger: GGCCTGCGATAGGGTGTGAGTAGGGCCAGCTTCCTGGAAGTGCAACCTGTGCAATGGCAGTAGGCCCCCATGCTTGGGGTTTAATGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp CGCTGTAGCTTGCAGCTCGGCTGTCTCAGTCTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGCACATTGAAGCTCAGGTCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: RCSLQLGCLSLWQRC*APASVSTLKLRSSS
Trigger: CGAGCTGGACCTGAGCTTCAATGTGCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCCGAGCTGCAAGCTACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp GGTAAGAGGTATACCTCCCAATCCCCTCAGCTACCCACCCCAGGCTaGCTCACCATCAAAGACTGTGCCCTGTTAGCCTTTCCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: GKRYTSQSPQLPTPG*LTIKDCALLAFPRP
Trigger: CGGCCTGGGAAAGGCTAACAGGGCACAGTCTTTGATGGTGAGCAAGCCTGGGGTGGGTAGCTGAGGGGATTGGGAGGTATACCTCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp TCGTCAGTCCCCAAAGGCTTCGTATGCAGGTCCCCTTaGGAGGCAGGAGAAGGCACGCACAAGAGTTCCACC +
Preference number: 6 (lower is better)
Translates to: SSVPKGFVCRSP*EAGEGTHKSST
Trigger: GGTGGAACTCTTGTGCGTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACGAAGCCTTTGGGGACTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp GCAGAGGCCCTGCCACCATCCAGCTGTGCTGTGGGTTaGTCTCACCCAGGAACTGGTCCCACACACAGAATT +
Preference number: 6 (lower is better)
Translates to: AEALPPSSCAVG*SHPGTGPTHRI
Trigger: AATTCTGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp CTGGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCTaGGGTTCCACGGCTGGCTGGTGTTCCTTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: LGTSISWRLCCT*GSTAGWCSFLV
Trigger: AACCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262467.10
ENST00000544378.6
CDS TCA 72 bp CATCTTTGCACTTCCGGTCCCAGGACTGGCTCAAGCTaGACAGCTTCCGCATCTGGCTGGGCCTCGTGTTCT +
Preference number: 6 (lower is better)
Translates to: HLCTSGPRTGSS*TASASGWASCS
Trigger: AGAACACGAGGCCCAGCCAGATGCGGAAGCTGTTCAGCTTGAGCCAGTCCTGGGACCGGAAGTGCAAAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp CTGGGCACTAGTATCTCCTGGCGTCTCTGTTGCACCTaGGGTTCCACGGCTGGCTGGTGTTCCTTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LGTSISWRLCCT*GSTAGWCSFLE
Trigger: TTCCAGGAAGGAACACCAGCCAGCCGTGGAACCTCAGGTGCAACAGAGACGCCAGGAGATACTAGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS TCA 72 bp GCACCAGCCAGCAAGAACAGCGCAGTTCAGCATGGCTaGGGAGACCTCAGGAAGCTGACAATCACGGCAGGA +
Preference number: 6 (lower is better)
Translates to: APASKNSAVQHG*GDLRKLTITAG
Trigger: TCCTGCCGTGATTGTCAGCTTCCTGAGGTCTCCTCAGCCATGCTGAACTGCGCTGTTCTTGCTGGCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572143.1
ENST00000576905.5
CDS GCA 72 bp GCAGCTGTCTCAAAACCCTTCTCTCTGAGCCCTGGGTaGACCCCGCCGGCAATTCATGGATCCAGGGCATTA +
Preference number: 6 (lower is better)
Translates to: AAVSKPFSLSPG*TPPAIHGSRAL
Trigger: TAATGCCCTGGATCCATGAATTGCCGGCGGGGTGCACCCAGGGCTCAGAGAGAAGGGTTTTGAGACAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp TGGCTCCAGTGCAGACAGAGCTCAGAACTCGGCTCCTaGAAGACCCATCCTGGCTCATCTACACCATCGAGG +
Preference number: 6 (lower is better)
Translates to: WLQCRQSSELGS*KTHPGSSTPSR
Trigger: CCTCGATGGTGTAGATGAGCCAGGATGGGTCTTGCAGGAGCCGAGTTCTGAGCTCTGTCTGCACTGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CTACCATGGTGGGGCTCCATGTTGATCTGTGCTGCCTaGCCTCAATCAGCTGAAGCTTCTTCACGTGGCGGC +
Preference number: 6 (lower is better)
Translates to: LPWWGSMLICAA*PQSAEASSRGG
Trigger: GCCGCCACGTGAAGAAGCTTCAGCTGATTGAGGGCAGGCAGCACAGATCAACATGGAGCCCCACCATGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CAAGCCCTCTCTGGCTTCATTGGTACTGCCGCAGGCTaGTGGGCACTAGTATCTCCTGGCGTCTCTGTTGCA +
Preference number: 6 (lower is better)
Translates to: QALSGFIGTAAG*WALVSPGVSVA
Trigger: TGCAACAGAGACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS GCA 72 bp TGTCATCCACCAAGCCCTCTCTGGCTTCATTGGTACTaGCGCAGGCTGCTGGGCACTAGTATCTCCTGGCGT +
Preference number: 6 (lower is better)
Translates to: CHPPSPLWLHWY*RRLLGTSISWR
Trigger: ACGCCAGGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS GCA 72 bp AGCTGCTCTCGATACTGGTCCACAAAGTGCAGCAACTaGGGGGCATCCAGAGGTGAAGGTACGGCTATGCGG +
Preference number: 6 (lower is better)
Translates to: SCSRYWSTKCSN*GASRGEGTAMR
Trigger: CCGCATAGCCGTACCTTCACCTCTGGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CGGGCTATCAGCTGCTCTCGATACTGGTCCACAAAGTaGAGCAACTGCGGGGCATCCAGAGGTGAAGGTACG +
Preference number: 6 (lower is better)
Translates to: RAISCSRYWSTK*SNCGASRGEGT
Trigger: CGTACCTTCACCTCTGGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp ACCCCAAGCATGGGGGCCTACTGCCATTGCACAGGTTaGACTTCCAGGAAGCTGGCCCTACTCACACCCTAT +
Preference number: 6 (lower is better)
Translates to: TPSMGAYCHCTG*TSRKLALLTPY
Trigger: ATAGGGTGTGAGTAGGGCCAGCTTCCTGGAAGTGCAACCTGTGCAATGGCAGTAGGCCCCCATGCTTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp TCTCTGGCTGAGCGGGTGTCTCACCCGAAGAGCTCCTaGAGTGCGCTTTATTGGCGAGCAGAAGCTGGAACT +
Preference number: 6 (lower is better)
Translates to: SLAERVSHPKSS*SALYWRAEAGT
Trigger: AGTTCCAGCTTCTGCTCGCCAATAAAGCGCACTCCAGGAGCTCTTCGGGTGAGACACCCGCTCAGCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CCTCCTTGTCATCCACCAAGCCCTCTCTGGCTTCATTaGTACTGCCGCAGGCTGCTGGGCACTAGTATCTCC +
Preference number: 6 (lower is better)
Translates to: PPCHPPSPLWLH*YCRRLLGTSIS
Trigger: GGAGATACTAGTGCCCAGCAGCCTGCGGCAGTACCAATGAAGCCAGAGAGGGCTTGGTGGATGACAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000574406.1
CDS CAA 72 bp AGCAGAGGCCCTGCCACCATCCAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGGTCCCACACACAGAAT +
Preference number: 6 (lower is better)
Translates to: SRGPATIQLCCG*ISPRNWSHTQN
Trigger: ATTCTGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp AACCCCAAGCATGGGGGCCTACTGCCATTGCACAGGTaGCACTTCCAGGAAGCTGGCCCTACTCACACCCTA +
Preference number: 6 (lower is better)
Translates to: NPKHGGLLPLHR*HFQEAGPTHTL
Trigger: TAGGGTGTGAGTAGGGCCAGCTTCCTGGAAGTGCAACCTGTGCAATGGCAGTAGGCCCCCATGCTTGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp CCAGAAGTCATCGTCAGTCCCCAAAGGCTTCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCACGCACAAGAGTTCCACCGGTACTAC +
Preference number: 6 (lower is better)
Translates to: PEVIVSPQRLRMQVP*RGRRRHAQEFHRYY
Trigger: GTAGTACCGGTGGAACTCTTGTGCGTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACGAAGCCTTTGGGGACTGACGATGACTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp CCAGCTCTCAGATGGCGTCTGATGACACTGTTTCTTCTCCCTGCCTaGGAGAGCCACAAAGTGAGGGAGGTGCACAGCTTCCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: PALRWRLMTLFLLPA*ESHKVREVHSFHSS
Trigger: GGAGCTGTGGAAGCTGTGCACCTCCCTCACTTTGTGGCTCTCCAAGGCAGGGAGAAGAAACAGTGTCATCAGACGCCATCTGAGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571307.1
CDS CAA 90 bp ACTGACTGCCACGCATTAAACCCCAAGCATGGGGGCCTACTGCCATaGCACAGGTTGCACTTCCAGGAAGCTGGCCCTACTCACACCCTA +
Preference number: 6 (lower is better)
Translates to: TDCHALNPKHGGLLP*HRLHFQEAGPTHTL
Trigger: TAGGGTGTGAGTAGGGCCAGCTTCCTGGAAGTGCAACCTGTGCAATGGCAGTAGGCCCCCATGCTTGGGGTTTAATGCGTGGCAGTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp GTGTTGACTTCCCAATTCCAGCAGCCCCCTGCAGTATaGCTATGCGAGGTTCTTGGGTATCCAGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: VLTSQFQQPPAV*LCEVLGYPGLG
Trigger: GCCCAGGCCTGGATACCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAATTGGGAAGTCAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp GCAGCAGCAGCAGCCAATCACTGGCCACCGACTGTGTaGTGGGAACTGTGCTCAACATTTCTGCAGAGATGG +
Preference number: 6 (lower is better)
Translates to: AAAAANHWPPTV*WELCSTFLQRW
Trigger: CCATCTCTGCAGAAATGTTGAGCACAGTTCCCAGCACACAGTCGGTGGCCAGTGATTGGCTGCTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp GACTCCATGGCCTCATCCTGGTGCAAGCTATGCCTATaGCCAGCAACAAGAGCTAACTTCGTCCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: DSMASSWCKLCL*PATRANFVPAQ
Trigger: CTGGGCTGGGACGAAGTTAGCTCTTGTTGCTGGGCATAGGCATAGCTTGCACCAGGATGAGGCCATGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp GTCAGGAACGTTTTGTTCCGAGTCTCGTACAAGCAGTaGAGGGACTCCAGAGAGTGTGGCTGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: VRNVLFRVSYKQ*RDSRECGCSSS
Trigger: GCTGCTGCTGCAGCCACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGACTCGGAACAAAACGTTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp AGAAGGCACGCACAAGAGTTCCACCGGTACTACCTCTaGGGAGCTTTCCTCGTGGCTCTTGCCTGCAATCTC +
Preference number: 6 (lower is better)
Translates to: RRHAQEFHRYYL*GAFLVALACNL
Trigger: GAGATTGCAGGCAAGAGCCACGAGGAAAGCTCCCCAGAGGTAGTACCGGTGGAACTCTTGTGCGTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262467.10
ENST00000544378.6
ENST00000613500.4
CDS CCA 72 bp ACCGATGTCACTCGGGCTATCAGCTGCTCTCGATACTaGTCCACAAAGTGCAGCAACTGCGGGGCATCCAGA +
Preference number: 6 (lower is better)
Translates to: TDVTRAISCSRY*STKCSNCGASR
Trigger: TCTGGATGCCCCGCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGTGACATCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GGGTCAAGGGCTGGTGTTGATACTTCAGCTGCTGAGTaGCAGGAGTCCCTTTTTGCTGCCCTTCTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: GSRAGVDTSAAE*QESLFAALLPE
Trigger: CTCTGGGAGAAGGGCAGCAAAAAGGGACTCCTGCCACTCAGCAGCTGAAGTATCAACACCAGCCCTTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269280.8
ENST00000571451.6
ENST00000572272.6
CDS CCA 72 bp AGACTGTGCCCTGTTAGCCTTTCCCAGGCCGCATTCTaGGCCTCACCCTGCAGCAAAACAGACTTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: RLCPVSLSQAAF*ASPCSKTDLFP
Trigger: AGGGAACAAGTCTGTTTTGCTGCAGGGTGAGGCCCAGAATGCGGCCTGGGAAAGGCTAACAGGGCACAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp TGGATGATAGCAGCAGCAGCAGCAGCAGCCAATCACTaGCCACCGACTGTGTGCTGGGAACTGTGCTCAACA +
Preference number: 6 (lower is better)
Translates to: WMIAAAAAAANH*PPTVCWELCST
Trigger: TGTTGAGCACAGTTCCCAGCACACAGTCGGTGGCCAGTGATTGGCTGCTGCTGCTGCTGCTGCTATCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp CCCTGGGGGCTCTGTCTGTCAGGAATTGAGAGAGCTTaGCTGACTCCATGGCCTCATCCTGGTGCAAGCTAT +
Preference number: 6 (lower is better)
Translates to: PWGLCLSGIERA*LTPWPHPGASY
Trigger: ATAGCTTGCACCAGGATGAGGCCATGGAGTCAGCCAAGCTCTCTCAATTCCTGACAGACAGAGCCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 72 bp ATCGTCAGTCCCCAAAGGCTTCGTATGCAGGTCCCCTaGAGAGGCAGGAGAAGGCACGCACAAGAGTTCCAC +
Preference number: 6 (lower is better)
Translates to: IVSPQRLRMQVP*RGRRRHAQEFH
Trigger: GTGGAACTCTTGTGCGTGCCTTCTCCTGCCTCTCAAGGGGACCTGCATACGAAGCCTTTGGGGACTGACGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp CACGCATTAAACCCCAAGCATGGGGGCCTACTGCCATaGCACAGGTTGCACTTCCAGGAAGCTGGCCCTACT +
Preference number: 6 (lower is better)
Translates to: HALNPKHGGLLP*HRLHFQEAGPT
Trigger: AGTAGGGCCAGCTTCCTGGAAGTGCAACCTGTGCAATGGCAGTAGGCCCCCATGCTTGGGGTTTAATGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp CCACTTTTAGCTCGAAGTGTTCATGCCCAGCTGAGGAAACAGGCTTaGGTGGTGGTGGTGGTGGTGGGGTGTATGTGTCAGTGGGTGGGT +
Preference number: 6 (lower is better)
Translates to: PLLARSVHAQLRKQA*VVVVVVGCMCQWVG
Trigger: ACCCACCCACTGACACATACACCCCACCACCACCACCACCACCAAAGCCTGTTTCCTCAGCTGGGCATGAACACTTCGAGCTAAAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp ATCACACTTGGTTTCCGTCTGCTGAAGATGAGCAGCTaGGGTTTCTCCTGCTCCAGGGCCCTCAGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: ITLGFRLLKMSS*GFSCSRALSSC
Trigger: GCAGGAACTGAGGGCCCTGGAGCAGGAGAAACCTCAGCTGCTCATCTTCAGCAGACGGAAACCAAGTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000613500.4
ENST00000617618.4
CDS TCA 72 bp GGGAAGCCGCCCTCTCTGATCCGAGTCTCTGCCGCTTaGGTGAGGATGTGCTATTACTCATCTCTCCCGTAT +
Preference number: 6 (lower is better)
Translates to: GKPPSLIRVSAA*VRMCYYSSLPY
Trigger: ATACGGGAGAGATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGACTCGGATCAGAGAGGGCGGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CTGGCCAGTGTTGACTTCCCAATTCCAGCAGCCCCCTaGAGTATGACTATGCGAGGTTCTTGGGTATCCAGG +
Preference number: 6 (lower is better)
Translates to: LASVDFPIPAAP*SMTMRGSWVSR
Trigger: CCTGGATACCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTGCTGGAATTGGGAAGTCAACACTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp GACTCAGAGAACCCCAGGACCTCTACCCAACGTGCCTaGTCCAAAGAAGGAATGAGGTTCTGCAGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: DSENPRTSTQRA*SKEGMRFCRAV
Trigger: CACAGCTCTGCAGAACCTCATTCCTTCTTTGGAGCAGGCACGTTGGGTAGAGGTCCTGGGGTTCTCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp ACCCTCTCGTACTGCTCCTGGCTCAGCACCTGTCCATaGAGTTTGTCCAAGACAACCTCCACCGATGTCACT +
Preference number: 6 (lower is better)
Translates to: TLSYCSWLSTCP*SLSKTTSTDVT
Trigger: AGTGACATCGGTGGAGGTTGTCTTGGACAAACTGCATGGACAGGTGCTGAGCCAGGAGCAGTACGAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CCAGCAGCCCCCTGCAGTATGACTATGCGAGGTTCTTaGGTATCCAGGCCTGGGCCAAATAAGTCTCTGATC +
Preference number: 6 (lower is better)
Translates to: PAAPCSMTMRGS*VSRPGPNKSLI
Trigger: GATCAGAGACTTATTTGGCCCAGGCCTGGATACCCAAGAACCTCGCATAGTCATACTGCAGGGGGCTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CTCATCTACACCATCGAGGATGAAGAGCAGCCGCTCTaGCCTAGACAGGATCTGTCTAATGGGAGCCGGAGT +
Preference number: 6 (lower is better)
Translates to: LIYTIEDEEQPL*PRQDLSNGSRS
Trigger: ACTCCGGCTCCCATTAGACAGATCCTGTCTAGGCCAGAGCGGCTGCTCTTCATCCTCGATGGTGTAGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp TTGCAGCTCGGCTGTCTCAGTCTCTGGCAAAGGTGTTaGGCTCCAGCATCCGTGAGCACATTGAAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LQLGCLSLWQRC*APASVSTLKLR
Trigger: CCTGAGCTTCAATGTGCTCACGGATGCTGGAGCCAAACACCTTTGCCAGAGACTGAGACAGCCGAGCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp TGGGAAGCCGCCCTCTCTGATCCGAGTCTCTGCCGCTaGAGTGAGGATGTGCTATTACTCATCTCTCCCGTA +
Preference number: 6 (lower is better)
Translates to: WEAALSDPSLCR*SEDVLLLISPV
Trigger: TACGGGAGAGATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGACTCGGATCAGAGAGGGCGGCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp TTGATGTCCAGCAGAGGCCCTGCCACCATCCAGCTGTGCTGTGGGTaGATCTCACCCAGGAACTGGTCCCACACACAGAATTCAATCTCA +
Preference number: 6 (lower is better)
Translates to: LMSSRGPATIQLCCG*ISPRNWSHTQNSIS
Trigger: TGAGATTGAATTCTGTGTGTGGGACCAGTTCCTGGGTGAGATCAACCCACAGCACAGCTGGATGGTGGCAGGGCCTCTGCTGGACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp CTCCCAGAGTTCCATAATGAGGTGAGGATGGGTCTCCTTCAGGGCTaGGTAGAGTCCATCTTTGCACTTCCGGTCCCAGGACTGGCTCAA +
Preference number: 6 (lower is better)
Translates to: LPEFHNEVRMGLLQG*VESIFALPVPGLAQ
Trigger: TTGAGCCAGTCCTGGGACCGGAAGTGCAAAGATGGACTCTACCAAGCCCTGAAGGAGACCCATCCTCACCTCATTATGGAACTCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp ACACTAGGATGTGCCTGGATAAGCCTAGTCACCTGCTaGAGGTGCTGTGGCACTTCTAGCCCAATGCAGGGT +
Preference number: 6 (lower is better)
Translates to: TLGCAWISLVTC*RCCGTSSPMQG
Trigger: ACCCTGCATTGGGCTAGAAGTGCCACAGCACCTTCAGCAGGTGACTAGGCTTATCCAGGCACATCCTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp TCCCAGCCCAGGGACTTCAGGACCACTAGACATCCCTaGCAGGACAGATACTGGAAGATCCCAAGCTACAAC +
Preference number: 6 (lower is better)
Translates to: SQPRDFRTTRHP*QDRYWKIPSYN
Trigger: GTTGTAGCTTGGGATCTTCCAGTATCTGTCCTGTCAGGGATGTCTAGTGGTCCTGAAGTCCCTGGGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp TTGGAAGTCAGTGTGAGTTTTTCCTTCCGCTTCATCTaGTGCATCAGGCAAGTGCAGGCCAGCCAGGACACC +
Preference number: 6 (lower is better)
Translates to: LEVSVSFSFRFI*CIRQVQASQDT
Trigger: GGTGTCCTGGCTGGCCTGCACTTGCCTGATGCAGCAGATGAAGCGGAAGGAAAAACTCACACTGACTTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp GCAACATGGGAAGCCGCCCTCTCTGATCCGAGTCTCTaGCGCTTGAGTGAGGATGTGCTATTACTCATCTCT +
Preference number: 6 (lower is better)
Translates to: ATWEAALSDPSL*RLSEDVLLLIS
Trigger: AGAGATGAGTAATAGCACATCCTCACTCAAGCGGCAGAGACTCGGATCAGAGAGGGCGGCTTCCCATGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp AAGACAACCTCCACCGATGTCACTCGGGCTATCAGCTaGTCTCGATACTGGTCCACAAAGTGCAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: KTTSTDVTRAIS*SRYWSTKCSNC
Trigger: GCAGTTGCTGCACTTTGTGGACCAGTATCGAGAGCAGCTGATAGCCCGAGTGACATCGGTGGAGGTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp ACCACAGAGGTGACGGGAATGAAGCGCAGGGCATTATaGATCATTTTCAGGAGGACTCCCAAGGGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: TTEVTGMKRRAL*IIFRRTPKGEK
Trigger: CTTCTCCCCCTTGGGAGTCCTCCTGAAAATGATCCATAATGCCCTGCGCTTCATTCCCGTCACCTCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp ATGGGAAGCCCCTGTTTCATGGCTCCAGCTCTCAGATaGCGTCTGATGACACTGTTTCTTCTCCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: MGSPCFMAPALR*RLMTLFLLPAL
Trigger: CAAGGCAGGGAGAAGAAACAGTGTCATCAGACGCCATCTGAGAGCTGGAGCCATGAAACAGGGGCTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571307.1
CDS CCA 72 bp CCTGAATGGACAAAGGCTACCTTTAGCTCCTGCTTCTaGGACCTGCCCAGAGTACATACCCCTCTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: PEWTKATFSSCF*DLPRVHTPLRG
Trigger: ACCTCTGAGAGGGGTATGTACTCTGGGCAGGTCCCAGAAGCAGGAGCTAAAGGTAGCCTTTGTCCATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp CCAGGGTGCTGTTCCTCTCTATCCTACAGCGTTGCCAGGGACTTCTaGCATGGCCAGAGCCTACTAGGTAGTGGTAGGTACTCAGGTTTT +
Preference number: 6 (lower is better)
Translates to: PGCCSSLSYSVARDF*HGQSLLGSGRYSGF
Trigger: AAAACCTGAGTACCTACCACTACCTAGTAGGCTCTGGCCATGCAAGAAGTCCCTGGCAACGCTGTAGGATAGAGAGGAACAGCACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS TCA 72 bp AAGATCTTGCTCACGTCCAGGAGTTTGAGATTAGCCTaGGCAACATGGGAAGCCGCCCTCTCTGATCCGAGT +
Preference number: 6 (lower is better)
Translates to: KILLTSRSLRLA*ATWEAALSDPS
Trigger: ACTCGGATCAGAGAGGGCGGCTTCCCATGTTGCTCAGGCTAATCTCAAACTCCTGGACGTGAGCAAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp GAGGGTATCAGGCAGGCAGAGAACAGTGCTGTCCTTTaGCTTGGCTCTTACCGTCTCTTATTCAGCATTCGG +
Preference number: 6 (lower is better)
Translates to: EGIRQAENSAVL*LGSYRLLFSIR
Trigger: CCGAATGCTGAATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTTCTCTGCCTGCCTGATACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp GAGTTCCACCGGTACTACCTCTGGGGAGCTTTCCTCTaGAATCTCAGCAATTGGGAAGATCTTGCTCACGTC +
Preference number: 6 (lower is better)
Translates to: EFHRYYLWGAFL*NLSNWEDLAHV
Trigger: GACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp CATCCACTGAGCATGCAGGCTCCAAACTCGGAATCATaGTTAAGTCCTTCCCTACACAGGCAATCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: HPLSMQAPNSES*LSPSLHRQSSR
Trigger: CCTGCTGGATTGCCTGTGTAGGGAAGGACTTAAGCATGATTCCGAGTTTGGAGCCTGCATGCTCAGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp CGTCTCAGGGTCTTACAAAGACTCTTCACTGCAGAGTaGCTCAGCGAGTTTCCACTTAGGTCCAGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RLRVLQRLFTAE*LSEFPLRSSSF
Trigger: GAAGGAGCTGGACCTAAGTGGAAACTCGCTGAGCCACTCTGCAGTGAAGAGTCTTTGTAAGACCCTGAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp AGAAGGCACGCACAAGAGTTCCACCGGTACTACCTCTaGGGAGCTTTCCTCTGCAATCTCAGCAATTGGGAA +
Preference number: 6 (lower is better)
Translates to: RRHAQEFHRYYL*GAFLCNLSNWE
Trigger: TTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCAGAGGTAGTACCGGTGGAACTCTTGTGCGTGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp CACAGCTTAACCACCTCAGCTAAAAGGGCTTCCAGTTaGCTGGATGAGGAGAAGATGGAACCCTCATCCGTG +
Preference number: 6 (lower is better)
Translates to: HSLTTSAKRASS*LDEEKMEPSSV
Trigger: CACGGATGAGGGTTCCATCTTCTCCTCATCCAGCCAACTGGAAGCCCTTTTAGCTGAGGTGGTTAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS CCA 72 bp CGGGCAGAACCATGCAAAGGCTTATTGGGGAGGAGCTaGGTGTCAGTGAGGAGTGCAGGTGTTAAAAATGCT +
Preference number: 6 (lower is better)
Translates to: RAEPCKGLLGRS*VSVRSAGVKNA
Trigger: AGCATTTTTAACACCTGCACTCCTCACTGACACCCAGCTCCTCCCCAATAAGCCTTTGCATGGTTCTGCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 72 bp TTCCATAATGAGGTGAGGATGGGTCTCCTTCAGGGCTaGGTAGAGTCCATCTTTGCACTTCCGGTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: FHNEVRMGLLQG*VESIFALPVPG
Trigger: TCCTGGGACCGGAAGTGCAAAGATGGACTCTACCAAGCCCTGAAGGAGACCCATCCTCACCTCATTATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp GCCGCATTCTGGGCCTCACCCTGCAGCAAAACAGACTaGTTCCCTTTAGAATGTGTACACAGAGCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: AAFWASPCSKTD*FPLECVHRARG
Trigger: GCCTCTTGCTCTGTGTACACATTCTAAAGGGAACAAGTCTGTTTTGCTGCAGGGTGAGGCCCAGAATGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp GCCAGCCAGGACACCCAGGGCACAAGACACAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTAAAGGCTCTAATTGCTTGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: ASQDTQGTRHRAQSS*FDLTNLKALIACLS
Trigger: TGAAAGGCAAGCAATTAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCTGTGTCTTGTGCCCTGGGTGTCCTGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp GCTTCGATAGCAGAGCTCCAGTTCCTGAAGAGGCAAAGAGTTGAGTaGCCACCCTGTTCATCTTGCATGGAAGGTCTTTCCCCACCTGAC +
Preference number: 6 (lower is better)
Translates to: ASIAELQFLKRQRVE*PPCSSCMEGLSPPD
Trigger: GTCAGGTGGGGAAAGACCTTCCATGCAAGATGAACAGGGTGGCAACTCAACTCTTTGCCTCTTCAGGAACTGGAGCTCTGCTATCGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp GCCAGGAATCTCCCCTTTCCACAGGTCCTCTACCCAAACCCACAGTaGATGGGAAACCTGCAAGTGTATTGCAACCTCTACACTAGGATG +
Preference number: 6 (lower is better)
Translates to: ARNLPFPQVLYPNPQ*MGNLQVYCNLYTRM
Trigger: CATCCTAGTGTAGAGGTTGCAATACACTTGCAGGTTTCCCATCAACTGTGGGTTTGGGTAGAGGACCTGTGGAAAGGGGAGATTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp AGAGAAGGACCTTCTGGGAATCTCTGCTGCCTGGGCTATAGCTATTaGTTATCCTGGAAACCATGGCTGCCGAATTCCTCTCCTGCCAAC +
Preference number: 6 (lower is better)
Translates to: REGPSGNLCCLGYSY*LSWKPWLPNSSPAN
Trigger: GTTGGCAGGAGAGGAATTCGGCAGCCATGGTTTCCAGGATAACAAATAGCTATAGCCCAGGCAGCAGAGATTCCCAGAAGGTCCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp TCCTACCACCGCTGCCCATGGGGGCCTGCCTTTCTCTaGTTTCTCTCTCTCTCTTTCTCTGATTTCTGTGTA +
Preference number: 6 (lower is better)
Translates to: SYHRCPWGPAFL*FLSLSFSDFCV
Trigger: TACACAGAAATCAGAGAAAGAGAGAGAGAGAAATCAGAGAAAGGCAGGCCCCCATGGGCAGCGGTGGTAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp CCTGGAATGGAGGGAGAACAATCACTTGGATTTATTTaGGTCCCAGTAGATTGGAGAGGTCCACTGGCCGGC +
Preference number: 6 (lower is better)
Translates to: PGMEGEQSLGFI*VPVDWRGPLAG
Trigger: GCCGGCCAGTGGACCTCTCCAATCTACTGGGACTCAAATAAATCCAAGTGATTGTTCTCCCTCCATTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 72 bp GTTATCCTGGAAACCATGGCTGCCGAATTCCTCTCCTaGCAACTTCTAATTTATATGCGTGCCCTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VILETMAAEFLS*QLLIYMRALAG
Trigger: CCCAGCCAGGGCACGCATATAAATTAGAAGTTGGCAGGAGAGGAATTCGGCAGCCATGGTTTCCAGGATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp TGGGTGGGTGGGAGAGAAGGACCTTCTGGGAATCTCTaGTGCCTGGGCTATAGCTATTTGTTATCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: WVGGREGPSGNL*CLGYSYLLSWK
Trigger: TTTCCAGGATAACAAATAGCTATAGCCCAGGCAGCAGAGATTCCCAGAAGGTCCTTCTCTCCCACCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp AAAAACCCTGAATGGACAAAGGCTACCTTTAGCTCCTaGTTCTGGGACCTGCCCAGAGTACATACCCCTCTC +
Preference number: 6 (lower is better)
Translates to: KNPEWTKATFSS*FWDLPRVHTPL
Trigger: GAGAGGGGTATGTACTCTGGGCAGGTCCCAGAAGCAGGAGCTAAAGGTAGCCTTTGTCCATTCAGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp TATCAGGCAGGCAGAGAACAGTGCTGTCCTTTGCCTTaGCTCTTACCGTCTCTTATTCAGCATTCGGAACCC +
Preference number: 6 (lower is better)
Translates to: YQAGREQCCPLP*LLPSLIQHSEP
Trigger: GGGTTCCGAATGCTGAATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTTCTCTGCCTGCCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GGGGTCAGCGGGGGTGGCTTGTGGATTCGCACAAACTaGAATTTCATTTCTAGATCATCTATGGCCTTCCGA +
Preference number: 6 (lower is better)
Translates to: GVSGGGLWIRTN*NFISRSSMAFR
Trigger: TCGGAAGGCCATAGATGATCTAGAAATGAAATTCCAGTTTGTGCGAATCCACAAGCCACCCCCGCTGACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262467.10
ENST00000354411.7
ENST00000544378.6
ENST00000572272.6
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GTGGGAGAGAAGGACCTTCTGGGAATCTCTGCTGCCTaGGCTATAGCTATTTGTTATCCTGGAAACCATGGC +
Preference number: 6 (lower is better)
Translates to: VGEKDLLGISAA*AIAICYPGNHG
Trigger: GCCATGGTTTCCAGGATAACAAATAGCTATAGCCCAGGCAGCAGAGATTCCCAGAAGGTCCTTCTCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 72 bp GTATCAGGCAGGCAGAGAACAGTGCTGTCCTTTGCCTaGGCTCTTACCGTCTCTTATTCAGCATTCGGAACC +
Preference number: 6 (lower is better)
Translates to: VSGRQRTVLSFA*ALTVSYSAFGT
Trigger: GGTTCCGAATGCTGAATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTTCTCTGCCTGCCTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp TCTTCGAAATGGGCCATCACTTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAGCAGTGGAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: SSKWAITCVRNV*FRVSYKQWRDS
Trigger: GGAGTCCCTCCACTGCTTGTACGAGACTCGGAACAAAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp GCAGAGCTCCAGTTCCTGAAGAGGCAAAGAGTTGAGTaGCCACCCTGTTCATCTTGCATGGAAGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: AELQFLKRQRVE*PPCSSCMEGLS
Trigger: GGAAAGACCTTCCATGCAAGATGAACAGGGTGGCAACTCAACTCTTTGCCTCTTCAGGAACTGGAGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp GTGGTGAGGGTATCAGGCAGGCAGAGAACAGTGCTGTCCTTTGCCTaGGCTCTTACCGTCTCTTATTCAGCATTCGGAACCCAGTTTTAT +
Preference number: 6 (lower is better)
Translates to: VVRVSGRQRTVLSFA*ALTVSYSAFGTQFY
Trigger: ATAAAACTGGGTTCCGAATGCTGAATAAGAGACGGTAAGAGCCAAGGCAAAGGACAGCACTGTTCTCTGCCTGCCTGATACCCTCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262467.10
ENST00000345221.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000576905.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp CTCTCTCCCCCTCATCACTTAACAGGCCCAATAGGAAACGTGTGGTaGATGCCCCAAACAGGCCATGTATTCCATATGCTTCTAGCGTCT +
Preference number: 6 (lower is better)
Translates to: LSPPHHLTGPIGNVW*MPQTGHVFHMLLAS
Trigger: AGACGCTAGAAGCATATGGAATACATGGCCTGTTTGGGGCATCAACCACACGTTTCCTATTGGGCCTGTTAAGTGATGAGGGGGAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp ATGCCCATTTCTTCGAAATGGGCCATCACTTGTGTCAGGAACGTTTaGTTCCGAGTCTCGTACAAGCAGTGGAGGGACTCCAGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: MPISSKWAITCVRNV*FRVSYKQWRDSREC
Trigger: ACACTCTCTGGAGTCCCTCCACTGCTTGTACGAGACTCGGAACAAAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGAAATGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp CTTTCCCAGGCCGCATTCTGGGCCTCACCCTGCAGCAAAACAGACTaGTTCCCTTTAGAATGTGTACACAGAGCAAGAGGCAAAATTCAC +
Preference number: 6 (lower is better)
Translates to: LSQAAFWASPCSKTD*FPLECVHRARGKIH
Trigger: GTGAATTTTGCCTCTTGCTCTGTGTACACATTCTAAAGGGAACAAGTCTGTTTTGCTGCAGGGTGAGGCCCAGAATGCGGCCTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp CCAGGGCACAAGACACAGGGCCCAGAGCTCTTTGTTTaGTTTGACCAACCTAAAGGCTCTAATTGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: PGHKTQGPELFV*FDQPKGSNCLP
Trigger: AGGCAAGCAATTAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCTGTGTCTTGTGCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp CTCATCTTTCTTGTCTTTCACTTGCAGCCTGATCCCTaGTCCCAAGTGGCCAACGTAGAACTCCGAGAACAG +
Preference number: 6 (lower is better)
Translates to: LIFLVFHLQPDP*SQVANVELREQ
Trigger: CTGTTCTCGGAGTTCTACGTTGGCCACTTGGGATCAGGGATCAGGCTGCAAGTGAAAGACAAGAAAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571451.6
ENST00000572272.6
ENST00000574512.1
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp TCCCCTTTCCACAGGTCCTCTACCCAAACCCACAGTTaGTGGGAAACCTGCAAGTGTATTGCAACCTCTACA +
Preference number: 6 (lower is better)
Translates to: SPFHRSSTQTHS*WETCKCIATST
Trigger: TGTAGAGGTTGCAATACACTTGCAGGTTTCCCATCAACTGTGGGTTTGGGTAGAGGACCTGTGGAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp GCCGGCTTTGTTAGTTGCAGCAAATCCAACTCAAACTaGCATCAGAGAACTCCCTGCCTCCTGCAAGTGAAA +
Preference number: 6 (lower is better)
Translates to: AGFVSCSKSNSN*HQRTPCLLQVK
Trigger: TTTCACTTGCAGGAGGCAGGGAGTTCTCTGATGGCAGTTTGAGTTGGATTTGCTGCAACTAACAAAGCCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 72 bp AACCTGCAAGTGTATTGCAACCTCTACACTAGGATGTaGCTGGATAAGCCTAGTCACCTGCTGAAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: NLQVYCNLYTRM*LDKPSHLLKVL
Trigger: CAGCACCTTCAGCAGGTGACTAGGCTTATCCAGGCACATCCTAGTGTAGAGGTTGCAATACACTTGCAGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS GCA 72 bp CGAATTCCTCTCCTGCCAACTTCTAATTTATATGCGTaGCCTGGCTGGGAGAAGGGAAGTCAAGCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: RIPLLPTSNLYA*PGWEKGSQARN
Trigger: ATTCCTGGCTTGACTTCCCTTCTCCCAGCCAGGGCACGCATATAAATTAGAAGTTGGCAGGAGAGGAATTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp CCCCCTCATCACTTAACAGGCCCAATAGGAAACGTGTaGTTGATGCCCCAAACAGGCCATGTATTCCATATG +
Preference number: 6 (lower is better)
Translates to: PPHHLTGPIGNV*LMPQTGHVFHM
Trigger: CATATGGAATACATGGCCTGTTTGGGGCATCAACCACACGTTTCCTATTGGGCCTGTTAAGTGATGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GTAACGACAGCCCATATAAAGTGGGGTCAGCGGGGGTaGCTTGTGGATTCGCACAAACTGGAATTTCATTTC +
Preference number: 6 (lower is better)
Translates to: VTTAHIKWGQRG*LVDSHKLEFHF
Trigger: GAAATGAAATTCCAGTTTGTGCGAATCCACAAGCCACCCCCGCTGACCCCACTTTATATGGGCTGTCGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262467.10
ENST00000354411.7
ENST00000544378.6
ENST00000572272.6
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp ACCCTCATTTCTCCAGCCCAAAGCCTGTCTTCCCAATaGACCCTAAACTCCACCCACTGTCGATTGACAAAA +
Preference number: 6 (lower is better)
Translates to: TLISPAQSLSSQ*TLNSTHCRLTK
Trigger: TTTTGTCAATCGACAGTGGGTGGAGTTTAGGGTCCATTGGGAAGACAGGCTTTGGGCTGGAGAAATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp AATCTCTGCTGCCTGGGCTATAGCTATTTGTTATCCTaGAAACCATGGCTGCCGAATTCCTCTCCTGCCAAC +
Preference number: 6 (lower is better)
Translates to: NLCCLGYSYLLS*KPWLPNSSPAN
Trigger: GTTGGCAGGAGAGGAATTCGGCAGCCATGGTTTCCAGGATAACAAATAGCTATAGCCCAGGCAGCAGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 72 bp GACACCCAGGGCACAAGACACAGGGCCCAGAGCTCTTaGTTTGATTTGACCAACCTAAAGGCTCTAATTGCT +
Preference number: 6 (lower is better)
Translates to: DTQGTRHRAQSS*FDLTNLKALIA
Trigger: AGCAATTAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCTGTGTCTTGTGCCCTGGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp TCCTGGAATGGAGGGAGAACAATCACTTGGATTTATTaGAGTCCCAGTAGATTGGAGAGGTCCACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SWNGGRTITWIY*SPSRLERSTGR
Trigger: CCGGCCAGTGGACCTCTCCAATCTACTGGGACTCAAATAAATCCAAGTGATTGTTCTCCCTCCATTCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS CAA 72 bp CCTTCTGGGAATCTCTGCTGCCTGGGCTATAGCTATTaGTTATCCTGGAAACCATGGCTGCCGAATTCCTCT +
Preference number: 6 (lower is better)
Translates to: PSGNLCCLGYSY*LSWKPWLPNSS
Trigger: AGAGGAATTCGGCAGCCATGGTTTCCAGGATAACAAATAGCTATAGCCCAGGCAGCAGAGATTCCCAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp CAGCTTCTCTTGACCAGGGGATCTTGGCTTCTGGGGTaGGGTCTTTGTAGAAGTAGCAGCTGTGTGAATTTT +
Preference number: 6 (lower is better)
Translates to: QLLLTRGSWLLG*GLCRSSSCVNF
Trigger: AAAATTCACACAGCTGCTACTTCTACAAAGACCTCACCCCAGAAGCCAAGATCCCCTGGTCAAGAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp TTCAAGAAGGTGGAGATGATGGCCCCATCTAACCCATaGTTCCTGAGGTCATCTGGACTGAAAAGGGTCTTT +
Preference number: 6 (lower is better)
Translates to: FKKVEMMAPSNP*FLRSSGLKRVF
Trigger: AAAGACCCTTTTCAGTCCAGATGACCTCAGGAAGCATGGGTTAGATGGGGCCATCATCTCCACCTTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp AGATACTGGAAGATCCCAAGCTACAACTTCACACTCTaGTCGACACCAGAGCGTTCCAGGAAAAACCTCATG +
Preference number: 6 (lower is better)
Translates to: RYWKIPSYNFTL*STPERSRKNLM
Trigger: CATGAGGTTTTTCCTGGAACGCTCTGGTGTCGAGCAGAGTGTGAAGTTGTAGCTTGGGATCTTCCAGTATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp TACCTCTGGGGAGCTTTCCTCTGCAATCTCAGCAATTaGGAAGATCTTGCTCACGTCCAGGAGTTTGAGATT +
Preference number: 6 (lower is better)
Translates to: YLWGAFLCNLSN*EDLAHVQEFEI
Trigger: AATCTCAAACTCCTGGACGTGAGCAAGATCTTCCCAATTGCTGAGATTGCAGAGGAAAGCTCCCCAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp AGGACACAACTGAGTACCTCACGGGTAAGTCAGGGCTaGTCCTTAAACGTAGTGCTCATAATCCTAAGCCAG +
Preference number: 6 (lower is better)
Translates to: RTQLSTSRVSQG*SLNVVLIILSQ
Trigger: CTGGCTTAGGATTATGAGCACTACGTTTAAGGACAAGCCCTGACTTACCCGTGAGGTACTCAGTTGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 90 bp GACACCCAGGGCACAAGACACAGGGCCCAGAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTAATTGCTTGCCTTTCATCTGTGAAA +
Preference number: 6 (lower is better)
Translates to: DTQGTRHRAQSSLFD*TNLKALIACLSSVK
Trigger: TTTCACAGATGAAAGGCAAGCAATTAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCTGTGTCTTGTGCCCTGGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp GTCTGTTTCTACACACATGCCCATTTCTTCGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTTCCGAGTCTCGTACAAGCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: VCFYTHAHFFEMGHH*CQERFVPSLVQAVE
Trigger: CTCCACTGCTTGTACGAGACTCGGAACAAAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 90 bp AGAAGGATGAGGACACAACTGAGTACCTCACGGGTAAGTCAGGGCTaGTCCTTAAACGTAGTGCTCATAATCCTAAGCCAGATCCTTCTT +
Preference number: 6 (lower is better)
Translates to: RRMRTQLSTSRVSQG*SLNVVLIILSQILL
Trigger: AAGAAGGATCTGGCTTAGGATTATGAGCACTACGTTTAAGGACAAGCCCTGACTTACCCGTGAGGTACTCAGTTGTGTCCTCATCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp ATCCCCTTTCCTAAATCCCAGCTAAGACAGAACTCTTaGTTCCCCACTGTCTTCCAAACATGCTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: IPFPKSQLRQNS*FPTVFQTCSLS
Trigger: GGAAAGGGAGCATGTTTGGAAGACAGTGGGGAATCAAGAGTTCTGTCTTAGCTGGGATTTAGGAAAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CAA 72 bp GGCACAAGACACAGGGCCCAGAGCTCTTTGTTTGATTaGACCAACCTAAAGGCTCTAATTGCTTGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: GTRHRAQSSLFD*TNLKALIACLS
Trigger: TGAAAGGCAAGCAATTAGAGCCTTTAGGTTGGTCAAATCAAACAAAGAGCTCTGGGCCCTGTGTCTTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS GCA 72 bp TGCACACTAAGAGCTCCATGTCTGTTTCTACACACATaGCCATTTCTTCGAAATGGGCCATCACTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: CTLRAPCLFLHT*PFLRNGPSLVS
Trigger: TGACACAAGTGATGGCCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAGACATGGAGCTCTTAGTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CAA 72 bp TACACACATGCCCATTTCTTCGAAATGGGCCATCACTaGTGTCAGGAACGTTTTGTTCCGAGTCTCGTACAA +
Preference number: 6 (lower is better)
Translates to: YTHAHFFEMGHH*CQERFVPSLVQ
Trigger: TTGTACGAGACTCGGAACAAAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGAAATGGGCATGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS TCA 72 bp AGCCTACTAGGTAGTGGTAGGTACTCAGGTTTTTGCTaGATGAATGATGCAGTGAATAACGGCAGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: SLLGSGRYSGFC*MNDAVNNGSSK
Trigger: TTTGCTGCTGCCGTTATTCACTGCATCATTCATTCAGCAAAAACCTGAGTACCTACCACTACCTAGTAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574406.1
CDS GCA 72 bp TCCTCTTCCCCGTTTTCTTTCACACACACAGACCTCTaGTCTCTACATATGATCTTCCTCAGAGAGAATAGA +
Preference number: 6 (lower is better)
Translates to: SSSPFSFTHTDL*SLHMIFLRENR
Trigger: TCTATTCTCTCTGAGGAAGATCATATGTAGAGAGCAGAGGTCTGTGTGTGTGAAAGAAAACGGGGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS CCA 72 bp ATGTCTGTTTCTACACACATGCCCATTTCTTCGAAATaGGCCATCACTTGTGTCAGGAACGTTTTGTTCCGA +
Preference number: 6 (lower is better)
Translates to: MSVSTHMPISSK*AITCVRNVLFR
Trigger: TCGGAACAAAACGTTCCTGACACAAGTGATGGCCCATTTCGAAGAAATGGGCATGTGTGTAGAAACAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000262467.10
ENST00000269280.8
ENST00000345221.7
ENST00000354411.7
ENST00000544378.6
ENST00000571307.1
ENST00000571451.6
ENST00000572272.6
ENST00000577119.5
ENST00000613500.4
ENST00000617618.4
ENST00000619223.4
CDS CCA 72 bp GTGTCAAGGGTGGAATATAAGGTGTGTAAGGTGGAGTaGAAGAATATGAAGGTTGTAATGGAATGGCGTGAA +
Preference number: 6 (lower is better)
Translates to: VSRVEYKVCKVE*KNMKVVMEWRE
Trigger: TTCACGCCATTCCATTACAACCTTCATATTCTTCCACTCCACCTTACACACCTTATATTCCACCCTTGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574512.1
CDS TCA 72 bp GATATTTCTTGGAACTCTGTGGGAAGTCTTTGGAGGTaGCATAAAATCATACTTTGTGATTACTATCTTCTA +
Preference number: 6 (lower is better)
Translates to: DISWNSVGSLWR*HKIILCDYYLL
Trigger: TAGAAGATAGTAATCACAAAGTATGATTTTATGTCACCTCCAAAGACTTCCCACAGAGTTCCAAGAAATATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571307.1