RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLRC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000167984

Ensembl transcript IDs: ENST00000324659.12, ENST00000359128.10, ENST00000603055.1, ENST00000615877.4, ENST00000618137.1

Found 798 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTGCCATAACAGAGTACCCGTCACCCCCTGCCTGGACCACTCCTaGAGCAGAAGAGGAGCTCACGACCTCCTCCGGCAGCACCTCTCC +
Preference number: 1 (lower is better)
Translates to: LCHNRVPVTPCLDHS*SRRGAHDLLRQHLS
Trigger: GGAGAGGTGCTGCCGGAGGAGGTCGTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTACTCTGTTATGGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 90 bp GAGGGTCTGGTTGGTGCAGAGGGCCCCCATCAGTGCTGCCACTCCTaGGTCACTGATGGAATTGCTCTGCAGGTCCAGGCTCTCCAGGCC +
Preference number: 1 (lower is better)
Translates to: EGLVGAEGPHQCCHS*VTDGIALQVQALQA
Trigger: GGCCTGGAGAGCCTGGACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTCTGCACCAACCAGACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 90 bp GGCCACCTGGAGATAGAGAGCAGTGAGGGCTGTGTTGACCTTCAGTaGACGGGCCACCGCACACGCTCCGTCATCCCCGATGGCGTTCTC +
Preference number: 1 (lower is better)
Translates to: GHLEIESSEGCVDLQ*TGHRTRSVIPDGVL
Trigger: GAGAACGCCATCGGGGATGACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCTCTCTATCTCCAGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 90 bp CCCTCCCTTCTCTGTGCCATAACAGAGTACCCGTCACCCCCTGCCTaGACCACTCCTGCAGCAGAAGAGGAGCTCACGACCTCCTCCGGC +
Preference number: 1 (lower is better)
Translates to: PSLLCAITEYPSPPA*TTPAAEEELTTSSG
Trigger: GCCGGAGGAGGTCGTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTACTCTGTTATGGCACAGAGAAGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 90 bp AGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTaGTCGTGGAGGAGGTTGGCTGTCAGGTCCAGGTTCTTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: RVRFSLTATAMARAP*SWRRLAVRSRFFRV
Trigger: CACCCTGAAGAACCTGGACCTGACAGCCAACCTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 90 bp GAGGCTGAGGAGGGTCTGGTTGGTGCAGAGGGCCCCCATCAGTGCTaGCACTCCTGCGTCACTGATGGAATTGCTCTGCAGGTCCAGGCT +
Preference number: 1 (lower is better)
Translates to: EAEEGLVGAEGPHQC*HSCVTDGIALQVQA
Trigger: AGCCTGGACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTCTGCACCAACCAGACCCTCCTCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 90 bp CACATGAAGTCCTCAGGGTGTAAAGCTGGAACCAGCCTCCTGTACTaGTCAGCTTTCAGGCCTTTGGCCCCTAGTCCCTTGGGGGTGGCC +
Preference number: 1 (lower is better)
Translates to: HMKSSGCKAGTSLLY*SAFRPLAPSPLGVA
Trigger: GGCCACCCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGTTCCAGCTTTACACCCTGAGGACTTCATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 90 bp GGAGAACATGAGCTCTTTCAGACTCCTGTTCTGCTTCAAGGCATCTaGCATCCGCTGGGCTCCCATGGGCCCGATGCTGTTCTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: GEHELFQTPVLLQGI*HPLGSHGPDAVLLQ
Trigger: CTGCAGAAGAACAGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGGAGTCTGAAAGAGCTCATGTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR TCA 90 bp TCACATTTCAACAGTGCACGTGGGAGCATTTGTCTTGATGGCCTCTaGGATCATCCTGGCCCCGGAGTCCCCAATGTGGTTTCCCTGGAG +
Preference number: 1 (lower is better)
Translates to: SHFNSARGSICLDGL*DHPGPGVPNVVSLE
Trigger: CTCCAGGGAAACCACATTGGGGACTCCGGGGCCAGGATGATCTCAGAGGCCATCAAGACAAATGCTCCCACGTGCACTGTTGAAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR TCA 90 bp TCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCATTTGTCTTaGTGGCCTCTGAGATCATCCTGGCCCCGGAGTCCCCAATGTGGT +
Preference number: 1 (lower is better)
Translates to: STRITFQQCTWEHLS*WPLRSSWPRSPQCG
Trigger: ACCACATTGGGGACTCCGGGGCCAGGATGATCTCAGAGGCCATCAAGACAAATGCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 90 bp CTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATaGAAGCTGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAA +
Preference number: 1 (lower is better)
Translates to: LQELVPHRGSACLSP*KLWPQQWLWKPSKE
Trigger: TTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 90 bp GTTTCCCTGGAGATTGATATGCTGGAGCCTGTGGTTTCCAGACAGTaGTGTGGCAATGCATATCGCCCCGTCCATCCCCAGAGAATTCTC +
Preference number: 1 (lower is better)
Translates to: VSLEIDMLEPVVSRQ*CGNAYRPVHPQRIL
Trigger: GAGAATTCTCTGGGGATGGACGGGGCGATATGCATTGCCACAGCACTGTCTGGAAACCACAGGCTCCAGCATATCAATCTCCAGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 90 bp CCCTCTGTTACCCCTACCAAACGGATGCTCCTCACGGGCTTGAGGTaGCAGCTCATCTCAGAGCATGGGATGATTTTTAACCAGGTGAGT +
Preference number: 1 (lower is better)
Translates to: PSVTPTKRMLLTGLR*QLISEHGMIFNQVS
Trigger: ACTCACCTGGTTAAAAATCATCCCATGCTCTGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCATCCGTTTGGTAGGGGTAACAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR TCA 90 bp GCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCTCCTaGTCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCA +
Preference number: 1 (lower is better)
Translates to: AFLFKSFQLSICPFS*SVHQDHISTVHVGA
Trigger: TGCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 90 bp CTTGTCTGTTTTGCTCTGATGGGGTCTGTGTGGGCTAGCTGGCTCTaGTGTGTGCCTGACGACAGACTGAACTCCTTAACCATTTCAGAC +
Preference number: 1 (lower is better)
Translates to: LVCFALMGSVWASWL*CVPDDRLNSLTISD
Trigger: GTCTGAAATGGTTAAGGAGTTCAGTCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCACACAGACCCCATCAGAGCAAAACAGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 90 bp AGACCCAGGGGACTCTCAGGTGCCAGAATTGGGGACTCCTTTAATTaGAAGGGAGCTAAAGGGTCTACCTCCTACCTAGAAGTCCTTTCT +
Preference number: 1 (lower is better)
Translates to: RPRGLSGARIGDSFN*KGAKGSTSYLEVLS
Trigger: AGAAAGGACTTCTAGGTAGGAGGTAGACCCTTTAGCTCCCTTCCAATTAAAGGAGTCCCCAATTCTGGCACCTGAGAGTCCCCTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 90 bp GTCTCCGGAGACTTGAGTTTACCTTCAGAGCATTTGCCAGGGCTTTaGCTCCAGCCACCCCAATGGCATTTCCTCTTAAGTCGAGAATCT +
Preference number: 1 (lower is better)
Translates to: VSGDLSLPSEHLPGL*LQPPQWHFLLSRES
Trigger: AGATTCTCGACTTAAGAGGAAATGCCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAAACTCAAGTCTCCGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 90 bp AATTCTCTTGTCTGTTTTGCTCTGATGGGGTCTGTGTGGGCTAGCTaGCTCTGGTGTGTGCCTGACGACAGACTGAACTCCTTAACCATT +
Preference number: 1 (lower is better)
Translates to: NSLVCFALMGSVWAS*LWCVPDDRLNSLTI
Trigger: AATGGTTAAGGAGTTCAGTCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCACACAGACCCCATCAGAGCAAAACAGACAAGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 90 bp TATGAATTAAATTCTCTTGTCTGTTTTGCTCTGATGGGGTCTGTGTaGGCTAGCTGGCTCTGGTGTGTGCCTGACGACAGACTGAACTCC +
Preference number: 1 (lower is better)
Translates to: YELNSLVCFALMGSV*ASWLWCVPDDRLNS
Trigger: GGAGTTCAGTCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCACACAGACCCCATCAGAGCAAAACAGACAAGAGAATTTAATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR TCA 90 bp ATATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATaGTGGTTCCTGTCCGGATGCTCACTTTTGAAGAAACATTTCAAA +
Preference number: 1 (lower is better)
Translates to: ISSSRVGLHPWPQHP*WFLSGCSLLKKHFK
Trigger: TTTGAAATGTTTCTTCAAAAGTGAGCATCCGGACAGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 90 bp GTTATCAAGAACAAAGTCCTCGGACTTCTGATGGGAAATCTGAACTaGTGTTTCTCTTTTAGCGTACAAGAAGAAATAGATCCCTCTCAT +
Preference number: 1 (lower is better)
Translates to: VIKNKVLGLLMGNLN*CFSFSVQEEIDPSH
Trigger: ATGAGAGGGATCTATTTCTTCTTGTACGCTAAAAGAGAAACAGCAGTTCAGATTTCCCATCAGAAGTCCGAGGACTTTGTTCTTGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCCCGGCTCTCGTGCTaGGCAAGCAGCGTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPARLSC*ASSVPS
Trigger: GCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCACCGGGAGGCGGAGGTTaGAGGGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPPGGGG*RELRSC
Trigger: GCACGATCTCAGCTCCCTGCAACCTCCGCCTCCCGG...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGGCATCTGCCATCCGCTaGGCTCCCATGGGCCCGATG +
Preference number: 2 (lower is better)
Translates to: VRVRFSLTATAMARAPWSASAIR*APMGPM
Trigger: CATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGC...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCTTCTCTCACTGCCACTaGGATGGCCCGGGCACCCTG +
Preference number: 2 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVFSHCH*DGPGTL
Trigger: CAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAA...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGCTCCCATGGGCCCGATaGTGTTCTTCTGCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEELPWAR*CSSAGA
Trigger: TGCACCTGCAGAAGAACAGCATCGGGCCCATGGGAG...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGGCTTGTCCCAGGGCCTaGGCAGCGCCGGCCTGGATG +
Preference number: 2 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLACPRA*AAPAWM
Trigger: CATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAGC...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGCTCACGGGCTTGAGGTaGCAGCTCATCTCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEELTGLR*QLISEH
Trigger: ATGCTCTGAGATGAGCTGCCACCTCAAGCCCGTGAG...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGCCCGGCTCTCGTGCTaGGCAAGCAGCGTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: CGHSSGFGSLVRNDITARARLSC*ASSVPS
Trigger: GCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAAATCACTGGAACCCATaGGGTAGAGCCTACAGTGAG +
Preference number: 2 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPNHWNP*GRAYSE
Trigger: CTCACTGTAGGCTCTACCTCATGGGTTCCAGTGATT...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGTACCCGTCACCCCCTaGCTGGACCACTCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPVPVTP*LDHSCS
Trigger: GCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTAC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACCGGGAGGCGGAGGTTaGAGGGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPPGGGG*RELRSC
Trigger: GCACGATCTCAGCTCCCTGCAACCTCCGCCTCCCGG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGTACCCGTCACCCCCTaGCTGGACCACTCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: CGHSSGFGSLVRNDITARVPVTP*LDHSCS
Trigger: GCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTAC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGGAGGGTCTGGTTGGTaGAGAGGGCCCCCATCAGTG +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPGGSGW*RGPPSV
Trigger: CACTGATGGGGGCCCTCTGCACCAACCAGACCCTCC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCACCAATGTGGTTTCCCTaGAGATTGATATGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPPMWFP*RLICWS
Trigger: GCTCCAGCATATCAATCTCCAGGGAAACCACATTGG...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGAGGTTGCAGGGAGCTaGGATCGTGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: GHSSGFGSLVRNDITARCEVAGS*DRATAL
Trigger: GAGTGCAGTGGCACGATCTCAGCTCCCTGCAACCTC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACAGCGCCGGCCTGGATaGAGTTCCACTGCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPQRRPG*SSTAGE
Trigger: TTCACCTGCAGTGGAACTTCATCCAGGCCGGCGCTG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGCTGCTTCAAGGCATCTaGCATCCGCTGGGCTCCCAT +
Preference number: 2 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLLLQGI*HPLGSH
Trigger: ATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAG...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGCCAGGTTCTTCAGGGTaGTGTTGGCGCAGAGGGCAT +
Preference number: 2 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLPGSSG*CWRRGH
Trigger: ATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGG...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCATGTGTTGACCTTCAGTaGACGGGCCACCGCACACGC +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPCVDLQ*TGHRTR
Trigger: GCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACA...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACCAAGGCCTCAGCCATaGACCTGGCACCATCATCCC +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPPRPQP*TWHHHP
Trigger: GGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTGG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTCACTGCCACTGCGATaGCCCGGGCACCCTGGTCGT +
Preference number: 2 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACSLPLR*PGHPGR
Trigger: ACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCGAGGTTGCAGGGAGCTaGGATCGTGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: SLQHKQLQELVPHRGSACEVAGS*DRATAL
Trigger: GAGTGCAGTGGCACGATCTCAGCTCCCTGCAACCTC...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCGGGCTCCCTCGGGACTaGTGGAGTTTTCTCGAAGGC +
Preference number: 2 (lower is better)
Translates to: SLQHKQLQELVPHRGSACGLPRD*WSFLEG
Trigger: GCCTTCGAGAAAACTCCATCAGTCCCGAGGGAGCCC...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTGAGGGCCCCCATCAGTaGTGCCACTCCTGCGTCACT +
Preference number: 2 (lower is better)
Translates to: IIFPSRPSSMASASMMVPEGPHQ*CHSCVT
Trigger: AGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTC...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGCCCTGGAGGCATGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: CGHSSGFGSLVRNDITARALEAC*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAACATGCCTCCAGGGC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTGGAGAGGGTCCGGTTaGAGGCCAAGGCCTCAGCCA +
Preference number: 2 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACWRGSG*RPRPQP
Trigger: TGGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGGTCGTGGAGGAGGTTaGCTGTCAGGTCCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPGRGGG*LSGPGS
Trigger: AGAACCTGGACCTGACAGCCAACCTCCTCCACGACC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACATTTGCCAGGGCTTTaGCTCCAGCCACCCCAATGG +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPHLPGL*LQPPQW
Trigger: CCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CAA 90 bp GTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCATTTGTCTaGATGGCCTCTGAGATCATCCTGGCCCCGGAGTCCCCAATGTGG +
Preference number: 2 (lower is better)
Translates to: VHQDHISTVHVGAFV*MASEIILAPESPMW
Trigger: CCACATTGGGGACTCCGGGGCCAGGATGATCTCAGAGGCCATCAAGACAAATGCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGGCAGGAGAATCACATaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACGRRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCATGTGATTCTCCTGCC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTGCCTGGACCACTCCTaGAGCAGAAGAGGAGCTCAC +
Preference number: 2 (lower is better)
Translates to: IIFPSRPSSMASASMMVPCLDHS*SRRGAH
Trigger: GTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTGCCTGGACCACTCCTaGAGCAGAAGAGGAGCTCAC +
Preference number: 2 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACCLDHS*SRRGAH
Trigger: GTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCACCAGCCTCCTGTACTaGTCAGCTTTCAGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GHSSGFGSLVRNDITARCTSLLY*SAFRPL
Trigger: CAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAGGCTGAGGAGGGTCTaGTTGGTGCAGAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARRLRRV*LVQRAP
Trigger: GGGGGCCCTCTGCACCAACCAGACCCTCCTCAGCCT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTCAAAAGCTTCCAGCTaGGCATCTGCCCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: GHSSGFGSLVRNDITARCSKASS*ASAHSP
Trigger: AGGAGAATGGGCAGATGCTCAGCTGGAAGCTTTTGA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTGAGCCTACAGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: IIFPSRPSSMASASMMVPEPTVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGTAGGCTC...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACAAGTTCCACTGCAGGTaGAGGGAGGTGAGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDKFHCR*REVRVR
Trigger: CCGCACCCTCACCTCCCTTCACCTGCAGTGGAACTT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACCAGTGTTTGGCTACTaGAACTCTGTGTTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPPVFGY*NSVFCQ
Trigger: CTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCTACCTTCAGAGCATTTaGCAGGGCTTTGGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLQHKQLQELVPHRGSACYLQSI*QGFGSS
Trigger: GCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTA...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCTAGTCCCTTGGGGGTaGCCCCTCCCTTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSILVPWG*PLPSLC
Trigger: GCACAGAGAAGGGAGGGGCCACCCCCAAGGGACTAG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCTTCCAGACAGTGCTGTaGCAATGCATATCGCCCCGT +
Preference number: 2 (lower is better)
Translates to: SLQHKQLQELVPHRGSACFQTVL*QCISPR
Trigger: ACGGGGCGATATGCATTGCCACAGCACTGTCTGGAA...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTCAAAAGCTTCCAGCTaGGCATCTGCCCATTCTCCT +
Preference number: 2 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSKASS*ASAHSP
Trigger: AGGAGAATGGGCAGATGCTCAGCTGGAAGCTTTTGA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTGGCCTCAGCATCCATaGTGGTTCCTGTCCGGATGC +
Preference number: 2 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDWPQHP*WFLSGC
Trigger: GCATCCGGACAGGAACCATCATGGATGCTGAGGCCA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCAGCTTTCAGGCCTTTaGCCCCTAGTCCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIQLSGL*PLVPWG
Trigger: CCCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAGAGGGCATGAGCGATaGCCTGGGCTCCCTCGGGAC +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTRGHER*PGLPRD
Trigger: GTCCCGAGGGAGCCCAGGCCATCGCTCATGCCCTCT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCTCCAGCCACCCCAATaGCATTTCCTCTTAAGTCGA +
Preference number: 2 (lower is better)
Translates to: CGHSSGFGSLVRNDITARLQPPQ*HFLLSR
Trigger: TCGACTTAAGAGGAAATGCCATTGGGGTGGCTGGAG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CAA 90 bp AGTCTCCGGAGACTTGAGTTTACCTTCAGAGCATTTGCCAGGGCTTaGGCTCCAGCCACCCCAATGGCATTTCCTCTTAAGTCGAGAATC +
Preference number: 2 (lower is better)
Translates to: SLRRLEFTFRAFARA*APATPMAFPLKSRI
Trigger: GATTCTCGACTTAAGAGGAAATGCCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAAACTCAAGTCTCCGGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGCACTCCAGCCTGGGTaGCAGATTCTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACALQPG*QILSQK
Trigger: TTTTTGAGACAGAATCTGTCACCCAGGCTGGAGTGC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTGCACTCCAGCCTGGGTaGCAGATTCTGTCTCAAAAA +
Preference number: 2 (lower is better)
Translates to: IIFPSRPSSMASASMMVPALQPG*QILSQK
Trigger: TTTTTGAGACAGAATCTGTCACCCAGGCTGGAGTGC...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGAGCCTACAGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDEPTVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGTAGGCTC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTATCACCTTTGTGGGGTaGCGTTTTGAGACTGCAAGG +
Preference number: 2 (lower is better)
Translates to: IIFPSRPSSMASASMMVPITFVG*RFETAR
Trigger: CCTTGCAGTCTCAAAACGGCACCCCACAAAGGTGAT...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCTAGTCCCTTGGGGGTaGCCCCTCCCTTCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTLVPWG*PLPSLC
Trigger: GCACAGAGAAGGGAGGGGCCACCCCCAAGGGACTAG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCATTTTCTCCACCAGTTTaGCTCCTGAGGTTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPFSPPV*LLRFLQ
Trigger: CTGAAGAAACCTCAGGAGCCAAACTGGTGGAGAAAA...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGGCAGGAGAATCACATaGACCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QSRNLCPAKTVINTARPMGRRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCATGTGATTCTCCTGCC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGCTCTGGTGTGTGCCTaGCGACAGACTGAACTCCTT +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIALVCA*RQTELL
Trigger: AAGGAGTTCAGTCTGTCGTCAGGCACACACCAGAGC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCATAGAGGCTCAGCTTaGCTGTCTCCATGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDHRGSA*LSPWKL
Trigger: CAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCATCACATTTCAACAGTaGACGTGGGAGCATTTGTCT +
Preference number: 2 (lower is better)
Translates to: GHSSGFGSLVRNDITARCITFQQ*TWEHLS
Trigger: AGACAAATGCTCCCACGTGCACTGTTGAAATGTGAT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGTAAGGATGATACCCTaGAATCTTCTTCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: GHSSGFGSLVRNDITARCVRMIP*NLLLEK
Trigger: CTTCTCAAGAAGAAGATTTCAGGGTATCATCCTTAC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCAGGTGAAGGGAGGTaGGGGTGCGGTTTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: QSRNLCPAKTVINTARPMAGEGR*GCGFLS
Trigger: TGAGAGAAAACCGCACCCTCACCTCCCTTCACCTGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCTCAGACAGAAACAATaGAAACCAGCAGACAGAGCA +
Preference number: 2 (lower is better)
Translates to: IIFPSRPSSMASASMMVPLRQKQ*KPADRA
Trigger: TGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCAGCTTTCAGGCCTTTaGCCCCTAGTCCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNQLSGL*PLVPWG
Trigger: CCCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAGTAATCCCAGTACTTTaGGAGGCCCAGGCTGATGGA +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARVIPVL*EAQADG
Trigger: TCCATCAGCCTGGGCCTCCCAAAGTACTGGGATTAC...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACTGTGGCCACAGCAGTaGCTTTGGAAGCCTAGTAAG +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARLWPQQ*LWKPSK
Trigger: CTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACAG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCTCAGCCAGGGCCTTaGCACCTCCATCACCAATAC +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPQPGP*HLHHQY
Trigger: GTATTGGTGATGGAGGTGCCAAGGCCCTGGCTGAGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCTCCGTCATCCCCGATaGCGTTCTCCTGTAAATCTA +
Preference number: 2 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDLRHPR*RSPVNL
Trigger: TAGATTTACAGGAGAACGCCATCGGGGATGACGGAG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAAGCCTAGTAAGGAATaGCATCACTGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARKPSKE*HHCQVQ
Trigger: CTGCACCTGGCAGTGATGTCATTCCTTACTAGGCTT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCCCTCCCTTCTCTGTaGCATAACAGAGTACCCGTC +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPLPSL*HNRVPV
Trigger: GACGGGTACTCTGTTATGGCACAGAGAAGGGAGGGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATCACCTTTGTGGGGTaGCGTTTTGAGACTGCAAGG +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIITFVG*RFETAR
Trigger: CCTTGCAGTCTCAAAACGGCACCCCACAAAGGTGAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCAGGGGACTCTCAGGTaGCAGAATTGGGGACTCCTT +
Preference number: 2 (lower is better)
Translates to: QSRNLCPAKTVINTARPMQGTLR*QNWGLL
Trigger: AAGGAGTCCCCAATTCTGGCACCTGAGAGTCCCCTG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCGATGCTGTTCTTCTaGAGGTGCAGCATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPMLFF*RCSMER
Trigger: CCTCTCCATGCTGCACCTGCAGAAGAACAGCATCGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCTCACGGGCTTGAGGTaGCAGCTCATCTCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTLTGLR*QLISEH
Trigger: ATGCTCTGAGATGAGCTGCCACCTCAAGCCCGTGAG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAAAAAGGCAAAATCCTTaGAGAACTCTTACTGTCTCT +
Preference number: 2 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPKRQNP*RTLTVS
Trigger: AGAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCTGATGGGGTCTGTGTaGGCTAGCTGGCTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNLMGSV*ASWLWC
Trigger: ACACCAGAGCCAGCTAGCCCACACAGACCCCATCAG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATATGCTGGAGCCTGTaGTTTCCAGACAGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIICWSL*FPDSAV
Trigger: CACAGCACTGTCTGGAAACCACAGGCTCCAGCATAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCCACTCCTGCGTCACTaGTGGAATTGCTCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNPLLRH*WNCSAG
Trigger: ACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTACCAGCCTCCTGTACTaGTCAGCTTTCAGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTTSLLY*SAFRPL
Trigger: CAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGAAGGTTGGGGACACATaGAGTCCTCAGGGTGTAAAG +
Preference number: 2 (lower is better)
Translates to: QSRNLCPAKTVINTARPMKVGDT*SPQGVK
Trigger: CTTTACACCCTGAGGACTTCATGTGTCCCCAACCTT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGATCCAACACAAACAGCTaGAGGAATTGGTGCCACATA +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARSNTNS*RNWCHI
Trigger: TATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAGCTTTCTCCAGTGTTTaGCTACTGCAACTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARAFSSV*LLQLCV
Trigger: AACACAGAGTTGCAGTAGCCAAACACTGGAGAAAGC...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCGGAGTCCCCAATGTaGTTTCCCTGGAGATTGATA +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPESPM*FPWRLI
Trigger: TATCAATCTCCAGGGAAACCACATTGGGGACTCCGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAATCACTGGAACCCATaGGGTAGAGCCTACAGTGAG +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNNHWNP*GRAYSE
Trigger: CTCACTGTAGGCTCTACCTCATGGGTTCCAGTGATT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAAGCCTAGTAAGGAATaGCATCACTGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNKPSKE*HHCQVQ
Trigger: CTGCACCTGGCAGTGATGTCATTCCTTACTAGGCTT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATACTCCAGACAACATGTaGCAGGCATCACCCATGTCT +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNTPDNM*QASPMS
Trigger: AGACATGGGTGATGCCTGGCACATGTTGTCTGGAGT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGTGGTTTCCAGACAGTaGTGTGGCAATGCATATCGC +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNVVSRQ*CGNAYR
Trigger: GCGATATGCATTGCCACAGCACTGTCTGGAAACCAC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR TCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGATGTATGATCATTATTTaGAAAGGGAGAGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARCMIII*KGREGG
Trigger: TCCTCCCTCTCTCCCTTTTCAAATAATGATCATACA...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTGTATGATCATTATTTaGAAAGGGAGAGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSICMIII*KGREGG
Trigger: TCCTCCCTCTCTCCCTTTTCAAATAATGATCATACA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGTTCTCTTGTCTGTTTTaGTCTGATGGGGTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: QSRNLCPAKTVINTARPMFSCLF*SDGVCV
Trigger: CACACAGACCCCATCAGAGCAAAACAGACAAGAGAA...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACAAAAGGCAAAATCCTTaGAGAACTCTTACTGTCTCT +
Preference number: 2 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDKRQNP*RTLTVS
Trigger: AGAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTGTGTGTCCCATTATTaGCGATGTTCAATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSICVSHY*RCSILS
Trigger: TGACAGAATTGAACATCGCCAATAATGGGACACACA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATTCCAACACAAACAGCTaGAGGAATTGGTGCCACATA +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNSNTNS*RNWCHI
Trigger: TATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAACATTTTTAAAGGTTaGGGACACATGAAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: THYINIIAVRPRGLSGARNIFKG*GHMKSS
Trigger: TGAGGACTTCATGTGTCCCCAACCTTTAAAAATGTT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTCAGTGTCACGTGTCTaGAAGGAAATTGTATTCATT +
Preference number: 2 (lower is better)
Translates to: IRLGACDVCVSHYWRCSISVSRV*KEIVFI
Trigger: AATGAATACAATTTCCTTCCAGACACGTGACACTGA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGTAAGGATGATACCCTaGAATCTTCTTCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: NSDRNNANQQTEHHLESTVRMIP*NLLLEK
Trigger: CTTCTCAAGAAGAAGATTTCAGGGTATCATCCTTAC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGAACTGTCATAAATACTaGAAGACCCATGTTCAGATT +
Preference number: 2 (lower is better)
Translates to: QSRNLCPAKTVINTARPMNCHKY*KTHVQI
Trigger: AATCTGAACATGGGTCTTGCAGTATTTATGACAGTT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATTCAGGCCATTTATTCTaGAGAATATCTGTCAATTTG +
Preference number: 2 (lower is better)
Translates to: NANQQTEHHLESTKTAVNSGHLF*RISVNL
Trigger: CAAATTGACAGATATTCTGCAGAATAAATGGCCTGA...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR TCA 72 bp CCTCTCCTTCCTCCCTGCAGAGCCCGGCTCTCGTGCTaGGCAAGCAGCGTTCCCAGCTCCCAGACAGGCCCC +
Preference number: 3 (lower is better)
Translates to: PLLPPCRARLSC*ASSVPSSQTGP
Trigger: GGGGCCTGTCTGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGAAGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 72 bp CAGGTGAAGGGAGGTGAGGGTGCGGTTTTCTCTCACTaGCACTGCGATGGCCCGGGCACCCTGGTCGTGGAG +
Preference number: 3 (lower is better)
Translates to: QVKGGEGAVFSH*HCDGPGTLVVE
Trigger: CTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCACCTCCCTTCACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCATTTGCCAGGGCTTaGGCTCCAGCCACCCCAATG +
Preference number: 3 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPAFARA*APATPM
Trigger: CATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp AACAGAGTACCCGTCACCCCCTGCCTGGACCACTCCTaGAGCAGAAGAGGAGCTCACGACCTCCTCCGGCAG +
Preference number: 3 (lower is better)
Translates to: NRVPVTPCLDHS*SRRGAHDLLRQ
Trigger: CTGCCGGAGGAGGTCGTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTACTCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 72 bp AGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATaGTGTTCTTCTGCAGGTGCAGCATGGAGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: RHLPSAGLPWAR*CSSAGAAWRGS
Trigger: GGACCCTCTCCATGCTGCACCTGCAGAAGAACAGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GGAGGAGGTTGGCTGTCAGGTCCAGGTTCTTCAGGGTaGTGTTGGCGCAGAGGGCATGAGCGATGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GGGWLSGPGSSG*CWRRGHERWPG
Trigger: CCCAGGCCATCGCTCATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGGACCTGACAGCCAACCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp AAGGGAGGTGAGGGTGCGGTTTTCTCTCACTGCCACTaGGATGGCCCGGGCACCCTGGTCGTGGAGGAGGTT +
Preference number: 3 (lower is better)
Translates to: KGGEGAVFSHCH*DGPGTLVVEEV
Trigger: AACCTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCACCTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp GGTTGGCTGTCAGGTCCAGGTTCTTCAGGGTGCTGTTaGCGCAGAGGGCATGAGCGATGGCCTGGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: GWLSGPGSSGCC*RRGHERWPGLP
Trigger: AGGGAGCCCAGGCCATCGCTCATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGGACCTGACAGCCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp AGGCTCCTGTTGAGCTGTAGTGCTTGTCCCAGGGCCTaGGCAGCGCCGGCCTGGATGAAGTTCCACTGCAGG +
Preference number: 3 (lower is better)
Translates to: RLLLSCSACPRA*AAPAWMKFHCR
Trigger: CCTGCAGTGGAACTTCATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAGCACTACAGCTCAACAGGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR TCA 72 bp AGAGGGCCCCCATCAGTGCTGCCACTCCTGCGTCACTaGTGGAATTGCTCTGCAGGTCCAGGCTCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: RGPPSVLPLLRH*WNCSAGPGSPG
Trigger: GCCTGGAGAGCCTGGACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp ATGGAATTGCTCTGCAGGTCCAGGCTCTCCAGGCCCTaGTTCACCTTCAGGGCCTCAGCCAGGGCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: MELLCRSRLSRP*FTFRASARALA
Trigger: TGCCAAGGCCCTGGCTGAGGCCCTGAAGGTGAACCAGGGCCTGGAGAGCCTGGACCTGCAGAGCAATTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp TTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTaGTCGTGGAGGAGGTTGGCTGTCAGGTCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: FSLTATAMARAP*SWRRLAVRSRF
Trigger: GAACCTGGACCTGACAGCCAACCTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GAGGGTCTGGTTGGTGCAGAGGGCCCCCATCAGTGCTaGCACTCCTGCGTCACTGATGGAATTGCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: EGLVGAEGPHQC*HSCVTDGIALQ
Trigger: CTGCAGAGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTCTGCACCAACCAGACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GAGGAGGGTCTGGTTGGTGCAGAGGGCCCCCATCAGTaGTGCCACTCCTGCGTCACTGATGGAATTGCTCTG +
Preference number: 3 (lower is better)
Translates to: EEGLVGAEGPHQ*CHSCVTDGIAL
Trigger: CAGAGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTCTGCACCAACCAGACCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GAGATAGAGAGCAGTGAGGGCTGTGTTGACCTTCAGTaGACGGGCCACCGCACACGCTCCGTCATCCCCGAT +
Preference number: 3 (lower is better)
Translates to: EIESSEGCVDLQ*TGHRTRSVIPD
Trigger: ATCGGGGATGACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCTCTCTATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp TGTTCTTCTGCAGGTGCAGCATGGAGAGGGTCCGGTTaGAGGCCAAGGCCTCAGCCATGGACCTGGCACCAT +
Preference number: 3 (lower is better)
Translates to: CSSAGAAWRGSG*RPRPQPWTWHH
Trigger: ATGGTGCCAGGTCCATGGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCATGCTGCACCTGCAGAAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp ATGGAGTTTTCTCGAAGGCTGAGGCTGAGGAGGGTCTaGTTGGTGCAGAGGGCCCCCATCAGTGCTGCCACT +
Preference number: 3 (lower is better)
Translates to: MEFSRRLRLRRV*LVQRAPISAAT
Trigger: AGTGGCAGCACTGATGGGGGCCCTCTGCACCAACCAGACCCTCCTCAGCCTCAGCCTTCGAGAAAACTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGATGCTCCTCACGGGCTaGAGGTGGCAGCTCATCTCA +
Preference number: 3 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLMLLTG*RWQLIS
Trigger: TGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCAT...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GAGCTCTTTCAGACTCCTGTTCTGCTTCAAGGCATCTaGCATCCGCTGGGCTCCCATGGGCCCGATGCTGTT +
Preference number: 3 (lower is better)
Translates to: ELFQTPVLLQGI*HPLGSHGPDAV
Trigger: AACAGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGGAGTCTGAAAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp AAGGTTCTGTTCACAGCCAAGGCTTCCCCTAGCACCTaGGCGCCTGAAGCACCAATTGAGGCCACCTGGAGA +
Preference number: 3 (lower is better)
Translates to: KVLFTAKASPST*APEAPIEATWR
Trigger: TCTCCAGGTGGCCTCAATTGGTGCTTCAGGCGCCCAGGTGCTAGGGGAAGCCTTGGCTGTGAACAGAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTGCCCTGGAGGCATGTaGGCCAGGCTGGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACCPGGM*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAACATGCCTCCAGGGCA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp TCCTCAGGGTGTAAAGCTGGAACCAGCCTCCTGTACTaGTCAGCTTTCAGGCCTTTGGCCCCTAGTCCCTTG +
Preference number: 3 (lower is better)
Translates to: SSGCKAGTSLLY*SAFRPLAPSPL
Trigger: CAAGGGACTAGGGGCCAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGTTCCAGCTTTACACCCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 72 bp TTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATaGAAGCTGTGGCCACAGCAGTGGCTTTGGAAGCCT +
Preference number: 3 (lower is better)
Translates to: LVPHRGSACLSP*KLWPQQWLWKP
Trigger: AGGCTTCCAAAGCCACTGCTGTGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 72 bp GTCTGTTTTGCTCTGATGGGGTCTGTGTGGGCTAGCTaGCTCTGGTGTGTGCCTGACGACAGACTGAACTCC +
Preference number: 3 (lower is better)
Translates to: VCFALMGSVWAS*LWCVPDDRLNS
Trigger: GGAGTTCAGTCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCACACAGACCCCATCAGAGCAAAACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTCAGCTTTCAGGCCTTaGGCCCCTAGTCCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACSAFRP*APSPLG
Trigger: CCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTGA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR TCA 72 bp AACAGTGCACGTGGGAGCATTTGTCTTGATGGCCTCTaGGATCATCCTGGCCCCGGAGTCCCCAATGTGGTT +
Preference number: 3 (lower is better)
Translates to: NSARGSICLDGL*DHPGPGVPNVV
Trigger: AACCACATTGGGGACTCCGGGGCCAGGATGATCTCAGAGGCCATCAAGACAAATGCTCCCACGTGCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GCTGGAGCCTGTGGTTTCCAGACAGTGCTGTGGCAATaGATATCGCCCCGTCCATCCCCAGAGAATTCTCTT +
Preference number: 3 (lower is better)
Translates to: AGACGFQTVLWQ*ISPRPSPENSL
Trigger: AAGAGAATTCTCTGGGGATGGACGGGGCGATATGCATTGCCACAGCACTGTCTGGAAACCACAGGCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR GCA 72 bp GAGATTGATATGCTGGAGCCTGTGGTTTCCAGACAGTaGTGTGGCAATGCATATCGCCCCGTCCATCCCCAG +
Preference number: 3 (lower is better)
Translates to: EIDMLEPVVSRQ*CGNAYRPVHPQ
Trigger: CTGGGGATGGACGGGGCGATATGCATTGCCACAGCACTGTCTGGAAACCACAGGCTCCAGCATATCAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAATGGAGAGGGTCCGGTaGGAGGCCAAGGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: THYINIIAVRPRGLSGARMERVR*EAKASA
Trigger: GGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCAT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCTGGTTTCCCTGGAGATaGATATGCTGGAGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: PILLIRPPGSHFNSARGSWFPWR*ICWSLW
Trigger: CCACAGGCTCCAGCATATCAATCTCCAGGGAAACCA...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACATGCTCCTCACGGGCTaGAGGTGGCAGCTCATCTCA +
Preference number: 3 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDMLLTG*RWQLIS
Trigger: TGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCAT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAGCGTCACTGATGGAATaGCTCTGCAGGTCCAGGCTC +
Preference number: 3 (lower is better)
Translates to: THYINIIAVRPRGLSGARASLME*LCRSRL
Trigger: GAGCCTGGACCTGCAGAGCAATTCCATCAGTGACGC...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACTGGTGAGGCTCCTGTaGAGCTGTAGTGCTTGTCCC +
Preference number: 3 (lower is better)
Translates to: THYINIIAVRPRGLSGARLVRLL*SCSACP
Trigger: GGGACAAGCACTACAGCTCAACAGGAGCCTCACCAG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCGCCTGAAGCACCAATaGAGGCCACCTGGAGATAGA +
Preference number: 3 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDRLKHQ*RPPGDR
Trigger: TCTATCTCCAGGTGGCCTCAATTGGTGCTTCAGGCG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR TCA 72 bp TCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATaGTGGTTCCTGTCCGGATGCTCACTTTTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: SRVGLHPWPQHP*WFLSGCSLLKK
Trigger: TTTCTTCAAAAGTGAGCATCCGGACAGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 72 bp AGAATACATCAGAGACGACTCCGTGGTGCATCAGACTaGGGGCATGTGATGTCTGTGTGTCCCATTATTGGC +
Preference number: 3 (lower is better)
Translates to: RIHQRRLRGASD*GHVMSVCPIIG
Trigger: GCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGATGCACCACGGAGTCGTCTCTGATGTATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR TCA 72 bp TTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCTCCTaGTCCGTCCACCAGGATCACATTTCAACAGTGCAC +
Preference number: 3 (lower is better)
Translates to: FKSFQLSICPFS*SVHQDHISTVH
Trigger: GTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGGCAGATGCTCAGCTGGAAGCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp GGACTCTCAGGTGCCAGAATTGGGGACTCCTTTAATTaGAAGGGAGCTAAAGGGTCTACCTCCTACCTAGAA +
Preference number: 3 (lower is better)
Translates to: GLSGARIGDSFN*KGAKGSTSYLE
Trigger: TTCTAGGTAGGAGGTAGACCCTTTAGCTCCCTTCCAATTAAAGGAGTCCCCAATTCTGGCACCTGAGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CCA 72 bp GACTTGAGTTTACCTTCAGAGCATTTGCCAGGGCTTTaGCTCCAGCCACCCCAATGGCATTTCCTCTTAAGT +
Preference number: 3 (lower is better)
Translates to: DLSLPSEHLPGL*LQPPQWHFLLS
Trigger: ACTTAAGAGGAAATGCCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAAACTCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGTCATCCCTAACGGTGTaGCCCTGGAGGCATGTTGGC +
Preference number: 3 (lower is better)
Translates to: QSRNLCPAKTVINTARPMSSLTV*PWRHVG
Trigger: GCCAACATGCCTCCAGGGCAACACCGTTAGGGATGA...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp AGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTaGCGATGTTCAATTCTGTCACTTCTGTTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: RLGACDVCVSHY*RCSILSLLLRL
Trigger: CAGCCTCAACAGAAGTGACAGAATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTAAACAGCTGCAGGAATaGGTGCCACATAGAGGCTCA +
Preference number: 3 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIKQLQE*VPHRGS
Trigger: TGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGAGAGGGAGGACTCTTaGTTTTCTCCACCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIEREDS*FSPPVW
Trigger: CCAAACTGGTGGAGAAAACAAAGAGTCCTCCCTCTC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAGCTTTCTCCAGTGTTaGGCTACTGCAACTCTGTGT +
Preference number: 3 (lower is better)
Translates to: THYINIIAVRPRGLSGARSFLQC*ATATLC
Trigger: ACACAGAGTTGCAGTAGCCAAACACTGGAGAAAGCT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGTTACCTTCAGAGCATTaGCCAGGGCTTTGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: QSRNLCPAKTVINTARPMLPSEH*PGLWLQ
Trigger: CTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAA...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTACACTGAATGTGCTATaGATAACCAGTGTGCCAGAC +
Preference number: 3 (lower is better)
Translates to: IRLGACDVCVSHYWRCSITLNVL*ITSVPD
Trigger: GTCTGGCACACTGGTTATCAATAGCACATTCAGTGT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGAGAGGGAGGACTCTTaGTTTTCTCCACCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: NANQQTEHHLESTKTAVNEREDS*FSPPVW
Trigger: CCAAACTGGTGGAGAAAACAAAGAGTCCTCCCTCTC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCCCCAGAGAATTCTCTaGAAGATTGAGTCTCCGGAG +
Preference number: 3 (lower is better)
Translates to: NANQQTEHHLESTKTAVNPQRIL*KIESPE
Trigger: CTCCGGAGACTCAATCTTCAAGAGAATTCTCTGGGG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CCA 72 bp GAGTGGAAAGGGGCAGTAATAAACATTTTTAAAGGTTaGGGACACATGAAGTCCTCAGGGTGTAAAGCTGGA +
Preference number: 3 (lower is better)
Translates to: EWKGAVINIFKG*GHMKSSGCKAG
Trigger: TCCAGCTTTACACCCTGAGGACTTCATGTGTCCCCAACCTTTAAAAATGTTTATTACTGCCCCTTTCCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTATTCTGTCACTTCTGTaGAGGCTGCATTTGCCAGAT +
Preference number: 3 (lower is better)
Translates to: NSDRNNANQQTEHHLESTILSLL*RLHLPD
Trigger: ATCTGGCAAATGCAGCCTCAACAGAAGTGACAGAAT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATGACATTGATGTTTTaGATGAGGTCAGGCCATTTA +
Preference number: 3 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIMTLMF*MRSGHL
Trigger: TAAATGGCCTGACCTCATCAAAAACATCAATGTCAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR-3UTR CAA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAAAGGCAAAATCCTaGGAGAACTCTTACTGTCTC +
Preference number: 3 (lower is better)
Translates to: NSDRNNANQQTEHHLESTKKAKS*ENSYCL
Trigger: GAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTTT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR GCA 72 bp AACAAAGTCCTCGGACTTCTGATGGGAAATCTGAACTaGTGTTTCTCTTTTAGCGTACAAGAAGAAATAGAT +
Preference number: 3 (lower is better)
Translates to: NKVLGLLMGNLN*CFSFSVQEEID
Trigger: ATCTATTTCTTCTTGTACGCTAAAAGAGAAACAGCAGTTCAGATTTCCCATCAGAAGTCCGAGGACTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAAGGGAGGCCAGCCTGTaGCAGGGTCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPREASL*QGPPSS
Trigger: GGAGCTGGGCGGACCCTGGCACAGGCTGGCCTCCCT...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCCTTGCCCTTCTCCTaGCCCTCCCCGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPALPFS*PSPLRA
Trigger: GGCCCTCAGCGGGGAGGGGCAGGAGAAGGGCAAGGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCCCTGGGGCCCCGTCCTaGTGCGCCACAGGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVPGAPS*CATGGL
Trigger: TAGGCCACCTGTGGCGCAGCAGGACGGGGCCCCAGG...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGGGGGGCCGAGAGCAGTaGAGCCCCGACCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEGGREQ*SPDLLQ
Trigger: CTGCAGAAGGTCGGGGCTGCACTGCTCTCGGCCCCC...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGCTGCTGCGCCACAGGTaGCCTAGCGCCATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSLLRHR*PSAIPV
Trigger: CACGGGGATGGCGCTAGGCCACCTGTGGCGCAGCAG...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTGGGCCCCGCTCTCCATaGCCTCCTCCACGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAGPRSP*PPPRCG
Trigger: CCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGCCC...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGCTAGCGCCATCCCCGTaGGCCTGCAGAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSLAPSP*ACRRLG
Trigger: TCCCAGCCTTCTGCAGGCTCACGGGGATGGCGCTAG...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGAAGGACGCCCTGGCTaGGGCTCAGGGACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPEGRPG*GSGTGW
Trigger: CCAACCTGTCCCTGAGCCTCAGCCAGGGCGTCCTTC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGCCTCCCGGGCCTCGATaGTGCTCCAGGGACAGCAAG +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEPPGPR*CSRDSK
Trigger: CTTGCTGTCCCTGGAGCAGCATCGAGGCCCGGGAGG...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGGCCACCTCCCACCTTaGTCAGCAGGGCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPGHLPP*SAGPCG
Trigger: ACCGCAAGGCCCTGCTGAGCAAGGTGGGAGGTGGCC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATCACCAGGGTGGTCTTaGCCATGCCGGCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPSPGWS*PCRPPR
Trigger: TCGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATGCGAGGGCTTGCCTTaGCCTTCTCCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPCEGLP*PSPAPP
Trigger: GGGAGGGGCAGGAGAAGGGCAAGGCAAGCCCTCGCA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGCCGGGAGGCGGAGGTTaGAGGGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEPGGGG*RELRSC
Trigger: GCACGATCTCAGCTCCCTGCAACCTCCGCCTCCCGG...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATTTCACCTGCTCGGCTaGGGAGCCCGTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPFHLLG*GARTVA
Trigger: GGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCATCTGCCATCCGCTaGGCTCCCATGGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPASAIR*APMGPM
Trigger: CATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCAGGGACAGGTGGGTaGAGCAGTAGGCCACTGACG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPAGTGG*SSRPLT
Trigger: CGTCAGTGGCCTACTGCTTCACCCACCTGTCCCTGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCACCCGGGCCTCGATGCTaGTCCAGGGACAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPPGPRC*SRDSKT
Trigger: AGTCTTGCTGTCCCTGGAGCAGCATCGAGGCCCGGG...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGCATGGCCCGCTGGGCTaGGCTCCTGAAATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEHGPLG*APEMRE
Trigger: CTCACGCATTTCAGGAGCGCAGCCCAGCGGGCCATG...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATTCTCTCACTGCCACTaGGATGGCCCGGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPFSHCH*DGPGTL
Trigger: CAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCGGTTTTCTCTCACTaGCACTGCGATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPAVFSH*HCDGPG
Trigger: GCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGCTGCCACCGCCAGGCTaGGCTCCCCGACGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQLPPPG*APRRAG
Trigger: TCCCGCACGTCGGGGAGCCCAGCCTGGCGGTGGCAG...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGTGGGCAGCGCCGGCCTaGATGAAGTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEWAAPA*MKFHCR
Trigger: CCTGCAGTGGAACTTCATCCAGGCCGGCGCTGCCCA...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCTTGTCCCAGGGCCTaGGCAGCGCCGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEACPRA*AAPAWM
Trigger: CATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAGC...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGTGTGTTGACCTTCAGTaGACGGGCCACCGCACACGC +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEECVDLQ*TGHRTR
Trigger: GCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACA...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAACGGGGTCCTGGAACTaGTTGGTGTCCAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPTGSWN*LVSSLS
Trigger: GCTCAGGCTGGACACCAACCAGTTCCAGGACCCCGT...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGACGGGGTCCTGGAACTaGTTGGTGTCCAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEETGSWN*LVSSLS
Trigger: GCTCAGGCTGGACACCAACCAGTTCCAGGACCCCGT...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CAA 72 bp ACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGGTaGGCTGTCAGGTCCAGGTTCTTCAGGGTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TAMARAPWSWRR*AVRSRFFRVLL
Trigger: CAACAGCACCCTGAAGAACCTGGACCTGACAGCCAACCTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCACACTGGGACGGGAGGTaGTCCAGATGGAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPHWDGR*SRWKLP
Trigger: CGGAAGTTTCCATCTGGATCACCTCCCGTCCCAGTG...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGGAGCAGATAGGTGACTaGGGGCAGGCTGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEEQIGD*GQAESP
Trigger: AGGTGACTCAGCCTGCCCTCAGTCACCTATCTGCTC...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCCTGCGTGGTGGTAGATaGCCTGGGAATCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVLRGGR*PGNPCA
Trigger: GGCACAGGGATTCCCAGGGCATCTACCACCACGCAG...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGGGCGTCCATCTCCATaGTCCTGGGCTCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEGRPSP*SWAQPC
Trigger: GCAGGGCTGAGCCCAGGAGCATGGAGATGGACGCCC...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTCCCGGGCCTCGATGCTaGTCCAGGGACAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAPGPRC*SRDSKT
Trigger: AGTCTTGCTGTCCCTGGAGCAGCATCGAGGCCCGGG...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGCCACCATGGGCCACCTaGTCGATGCGAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEPPWAT*SMRGLA
Trigger: GGCAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGG...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGTCTGCAGGAAGCAGCTaGACGGGGCGCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALESAGSS*TGRPAA
Trigger: TGCTGCAGGGCGCCCCGTGCAGCTGCTTCCTGCAGA...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGTGGCCTCCTCCACGCTaGGGGCCAGCTCGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQWPPPR*GPARCA
Trigger: AGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCA...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGCCAGGTTCTTCAGGGTaGTGTTGGCGCAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSPGSSG*CWRRGH
Trigger: ATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGG...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTGCGGTTTTCTCTCACTaGCACTGCGATGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAAVFSH*HCDGPG
Trigger: GCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCCTGGTGCTCGCCTTaGGCCAGCAGGGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPAWCSP*ASREPA
Trigger: GGCCGGCTCCCTGCTGGCCCAAGGCGAGCACCAGGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCTCTGCAGGTGCAGCATaGAGAGGGTCCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVSAGAA*RGSGWR
Trigger: CCTCCAACCGGACCCTCTCCATGCTGCACCTGCAGA...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGGTCGTGGAGGAGGTTaGCTGTCAGGTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPGRGGG*LSGPGS
Trigger: AGAACCTGGACCTGACAGCCAACCTCCTCCACGACC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCGTGCCTCTGTATCCTTaGGTCATTGCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVVPLYP*VIAAGP
Trigger: GGGCCCTGCAGCAATGACTCAAGGATACAGAGGCAC...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCACCACTCCTGCGTCACTaGTGGAATTGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPPLLRH*WNCSAG
Trigger: ACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGG...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAATCTGCCCATTCTCCTaGTCCGTCCACCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPICPFS*SVHQDH
Trigger: GTGATCCTGGTGGACGGATCAGGAGAATGGGCAGAT...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCTGGCCTCAGCATCCATaGTGGTTCCTGTCCGGATGC +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVWPQHP*WFLSGC
Trigger: GCATCCGGACAGGAACCATCATGGATGCTGAGGCCA...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGCCGATGCTGTTCTTCTaGAGGTGCAGCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEPMLFF*RCSMER
Trigger: CCTCTCCATGCTGCACCTGCAGAAGAACAGCATCGG...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCGCAGCCCCGACCTTCTaGAGCCCCACCGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSAAPTF*SPTEPT
Trigger: GGTGGGCTCGGTGGGGCTGCAGAAGGTCGGGGCTGC...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCTGCCACCGCCAGGCTaGGCTCCCCGACGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPILPPPG*APRRAG
Trigger: TCCCGCACGTCGGGGAGCCCAGCCTGGCGGTGGCAG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCAGGAGGGCCCTGGCTaGGACTGCCACCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCQEGPG*DCHRQA
Trigger: AGCCTGGCGGTGGCAGTCCCAGCCAGGGCCCTCCTG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACAGGAGGGCCCTGGCTaGGACTGCCACCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPQEGPG*DCHRQA
Trigger: AGCCTGGCGGTGGCAGTCCCAGCCAGGGCCCTCCTG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGAGGCCCCCTGGGATCTaGCCAGATGCACTGGGACGG +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQRPPGI*PDALGR
Trigger: CCGTCCCAGTGCATCTGGCCAGATCCCAGGGGGCCT...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCGGGACCAGTCAGCCTaGCCAGGGCCCCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCRDQSA*PGPRSP
Trigger: TGGAGAGCGGGGCCCTGGCCAGGCTGACTGGTCCCG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGTGGAGAGGGTCCGGTTaGAGGCCAAGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEWRGSG*RPRPQP
Trigger: TGGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCA...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTCAGCTTTCAGGCCTTTaGCCCCTAGTCCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAQLSGL*PLVPWG
Trigger: CCCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTG...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCACTCACGGGCTTGAGGTaGCAGCTCATCTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPLTGLR*QLISEH
Trigger: ATGCTCTGAGATGAGCTGCCACCTCAAGCCCGTGAG...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGGAAGACCGAGCAGATaGGTCGGTCGGCACACAGCT +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEGRPSR*VGRHTA
Trigger: AGCTGTGTGCCGACCGACTCATCTGCTCGGTCTTCC...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCCCGGCTCTCGTGCTaGGCAAGCAGCGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPARLSC*ASSVPS
Trigger: GCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGGCAGGAGAATCACATaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEGRRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCATGTGATTCTCCTGCC...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAATGGCTCACTGCTGCTaGTGGCAGCCCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPMAHCC*WQPSRA
Trigger: GGCCCGGGAGGGCTGCCATCAGCAGCAGTGAGCCAT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTTGTGGCCAGCAGAGGTaGTGGCTCACTGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDACGQQR*WLTAAD
Trigger: ATCAGCAGCAGTGAGCCATCACCTCTGCTGGCCACA...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGCAGCCCTGCTCCAGCTaGGTGGTGGTAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQQPCSS*VVVDAL
Trigger: CAGGGCATCTACCACCACGCAGCTGGAGCAGGGCTG...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCAGGGAGGCCAGCCTGTaGCAGGGTCCGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACREASL*QGPPSS
Trigger: GGAGCTGGGCGGACCCTGGCACAGGCTGGCCTCCCT...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTAGTCCAGAGGCGTCCTaGACTCATCCAAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDASPEAS*THPSRP
Trigger: TGGACGGCTTGGATGAGTGCAGGACGCCTCTGGACT...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTCCCGTCCTCTGCCTaGATGGCCCGCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACLPSSA*MARWAA
Trigger: CGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCAGCCTCCCGTCCTCTaGCTGCATGGCCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIQPPVL*LHGPLG
Trigger: GCCCAGCGGGCCATGCAGGCAGAGGACGGGAGGCTG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGGCCCGTGCACAGACTaGGGCATCGGGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARGPCTD*GIGAQA
Trigger: TGCCTGCGCCCCGATGCCGCAGTCTGTGCACGGGCC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGCCAGGGCAGCGCGGTaGGCGGGACCAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACARAAR*AGPVSL
Trigger: CAGGCTGACTGGTCCCGCGCACCGCGCTGCCCTGGC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCACAGCTCTGCATCCTaGGGCCCCGTCCTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCHSSAS*GPVLLR
Trigger: GCGCAGCAGGACGGGGCCCCAGGATGCAGAGCTGTG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGCCAAGGCCTCAGCCATaGACCTGGCACCATCATCCC +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEPRPQP*TWHHHP
Trigger: GGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTGG...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGAGGCTGAGGAGGGTCTaGTTGGTGCAGAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLRLRRV*LVQRAP
Trigger: GGGGGCCCTCTGCACCAACCAGACCCTCCTCAGCCT...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCCTCACGGGCTTGAGGTaGCAGCTCATCTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVLTGLR*QLISEH
Trigger: ATGCTCTGAGATGAGCTGCCACCTCAAGCCCGTGAG...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGCCCGGCTCTCGTGCTaGGCAAGCAGCGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIARLSC*ASSVPS
Trigger: GCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGGCCACCTCCCACCTTaGTCAGCAGGGCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCGHLPP*SAGPCG
Trigger: ACCGCAAGGCCCTGCTGAGCAAGGTGGGAGGTGGCC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGTCGTGTTCCCTCAGCTaGAGGTCCGTCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLSCSLS*RSVRPS
Trigger: GGAGGGCCTGACGGACCTGCAGCTGAGGGAACACGA...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAAAGTCCTTGCCGACCTaGCCATGGGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPKSLPT*PWAQRR
Trigger: CCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCCTGGGCTCCCCGACGTaGGGGAAGACCGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSLGSPT*GKTEQM
Trigger: CATCTGCTCGGTCTTCCCGCACGTCGGGGAGCCCAG...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGTGGGATCTGGCCAGATaGACTGGGACGGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEWDLAR*TGTGGD
Trigger: ATCACCTCCCGTCCCAGTGCATCTGGCCAGATCCCA...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCCTGGGGCCCCGTCCTaGTGCGCCACAGGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPPGAPS*CATGGL
Trigger: TAGGCCACCTGTGGCGCAGCAGGACGGGGCCCCAGG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTGCCTTGCCCTTCTCCTaGCCCTCCCCGCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPALPFS*PSPLRA
Trigger: GGCCCTCAGCGGGGAGGGGCAGGAGAAGGGCAAGGC...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCGGGCCACCTGCTCGATaGGAGGGCTTGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSGPPAR*EGLPCP
Trigger: AGGGCAAGGCAAGCCCTCGCATCGAGCAGGTGGCCC...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGATAGTAATACGCGGCTaGCACAAACTCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSIVIRG*HKLLQG
Trigger: TCCCTGCAGGAGTTTGTGGCAGCCGCGTATTACTAT...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGGCTGCGCTCCTGAAATaGGTGAGGAAGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQAALLK*VRKPSL
Trigger: CAGGCTGGGCTTCCTCACGCATTTCAGGAGCGCAGC...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCCGTCCTCTGCCTaGATGGCCCGCTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACLPSSA*MARWAA
Trigger: CGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGGCCCGTGCACAGACTaGGGCATCGGGGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACGPCTD*GIGAQA
Trigger: TGCCTGCGCCCCGATGCCGCAGTCTGTGCACGGGCC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGGGGGCCGAGAGCAGTaGAGCCCCGACCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARGGREQ*SPDLLQ
Trigger: CTGCAGAAGGTCGGGGCTGCACTGCTCTCGGCCCCC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGACTCCAGACAACATGTaGCAGGCATCACCCATGTCT +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSTPDNM*QASPMS
Trigger: AGACATGGGTGATGCCTGGCACATGTTGTCTGGAGT...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCACAGCTCTGCATCCTaGGGCCCCGTCCTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARHSSAS*GPVLLR
Trigger: GCGCAGCAGGACGGGGCCCCAGGATGCAGAGCTGTG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCGTCCTCTGCCTGCATaGCCCGCTGGGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACRPLPA*PAGLRS
Trigger: GGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCAGAGGGCATGAGCGATaGCCTGGGCTCCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSRGHER*PGLPRD
Trigger: GTCCCGAGGGAGCCCAGGCCATCGCTCATGCCCTCT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTCACTGCCACTGCGATaGCCCGGGCACCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCSLPLR*PGHPGR
Trigger: ACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGCTGATGGGGTCTGTGTaGGCTAGCTGGCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALELMGSV*ASWLWC
Trigger: ACACCAGAGCCAGCTAGCCCACACAGACCCCATCAG...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
3UTR CAA 72 bp TCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTaGCCCTGGAGGCATGTTGGCCAGGCTGGTCTCGAA +
Preference number: 4 (lower is better)
Translates to: SAMDLAPSSLTV*PWRHVGQAGLE
Trigger: TTCGAGACCAGCCTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCAGGGACAGGTGGGTaGAGCAGTAGGCCACTGACG +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPAGTGG*SSRPLT
Trigger: CGTCAGTGGCCTACTGCTTCACCCACCTGTCCCTGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCGGCCAGGAGGGCATTaGCCCTCGGAGACAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIRPGGH*PSETRG
Trigger: GCCTCTTGTCTCCGAGGGTCAATGCCCTCCTGGCCG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTGCCAAGCTGATCTTCTaGATGCGACAGTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAAKLIF*MRQSFP
Trigger: TGGGAAGGACTGTCGCATTCAGAAGATCAGCTTGGC...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCTCTGGTGTGTGCCTaGCGACAGACTGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEALVCA*RQTELL
Trigger: AAGGAGTTCAGTCTGTCGTCAGGCACACACCAGAGC...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTTCACCAGGGTGGTCTTaGCCATGCCGGCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPISPGWS*PCRPPR
Trigger: TCGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGA...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACTCGATGCGAGGGCTTaGCTTGCCCTTCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPLDARA*LALLLP
Trigger: GGGCAGGAGAAGGGCAAGGCAAGCCCTCGCATCGAG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCGGGCCACCTGCTCGATaGGAGGGCTTGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACGPPAR*EGLPCP
Trigger: AGGGCAAGGCAAGCCCTCGCATCGAGCAGGTGGCCC...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTCTGCAGGAAGCAGCTaGACGGGGCGCCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSAGSS*TGRPAA
Trigger: TGCTGCAGGGCGCCCCGTGCAGCTGCTTCCTGCAGA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACATGGCCCGCTGGGCTaGGCTCCTGAAATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPHGPLG*APEMRE
Trigger: CTCACGCATTTCAGGAGCGCAGCCCAGCGGGCCATG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCACGTTGATGGCCCGTaGACAGACTGCGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCHVDGP*TDCGIG
Trigger: CCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTCCCACTCAGCACGCTaGCCAGCAGCTCCATCACGG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCSHSAR*PAAPSR
Trigger: CCGTGATGGAGCTGCTGGGCAGCGTGCTGAGTGGGA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTTCTCTCACTGCCACTaGGATGGCCCGGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCFSHCH*DGPGTL
Trigger: CAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGTACCCGTCACCCCCTaGCTGGACCACTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIVPVTP*LDHSCS
Trigger: GCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTAC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCCCAGTGTTTGGCTACTaGAACTCTGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVPVFGY*NSVFCQ
Trigger: CTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGG...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCAGGGACAGCAAGACTaGGGGGCCTGGGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACQGQQD*GAWGRP
Trigger: TGGACGCCCCCAGGCCCCCCAGTCTTGCTGTCCCTG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTTTCACCTGCTCGGCTaGGGAGCCCGTACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARFHLLG*GARTVA
Trigger: GGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTTTGCCGACCTGCCCATaGGCCCAGAGGCGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPILPTCP*AQRRTK
Trigger: CTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAA...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGCGGGATCTCCTTCTTTaGGTCCGTGCAGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLRDLLL*VRAGHG
Trigger: ACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCG...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGCCTGCATGGCCCGCTaGGCTGCGCTCCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIACMAR*AALLKC
Trigger: GCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGACAGGTTGGCCTCCTaGGCACAGGCGTCGGACACC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARDRLAS*AQASDT
Trigger: GGTGTCCGACGCCTGTGCCCAGGAGGCCAACCTGTC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGTCCGCTGGGCTCCCATaGGCCCGATGCTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLSAGLP*ARCCSS
Trigger: AGAAGAACAGCATCGGGCCCATGGGAGCCCAGCGGA...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGCATCTGCCATCCGCTaGGCTCCCATGGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIASAIR*APMGPM
Trigger: CATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGGCCCCAGGAACTCAATaGATGGGGCTCAGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLAPGTQ*MGLSLP
Trigger: CGGAAGGCTGAGCCCCATCCATTGAGTTCCTGGGGC...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCTAGTCCCTTGGGGGTaGCCCCTCCCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCLVPWG*PLPSLC
Trigger: GCACAGAGAAGGGAGGGGCCACCCCCAAGGGACTAG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGGGGGACTCCTTTAATTaGAAGGGAGCTAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSGDSFN*KGAKGS
Trigger: AGACCCTTTAGCTCCCTTCCAATTAAAGGAGTCCCC...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGGCAGTGCAACACGTTaGTGGCCCGTGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPGSATR*WPVHRL
Trigger: CAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGTGGCCCCTTTGTTACTaGTCTGGTTCTCCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQWPLCY*SGSPPS
Trigger: GCTTGGCGGAGAACCAGATCAGTAACAAAGGGGCCA...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGGCAGGAGAATCACATaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCGRRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCATGTGATTCTCCTGCC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCTGCGTGGTGGTAGATaGCCTGGGAATCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCLRGGR*PGNPCA
Trigger: GGCACAGGGATTCCCAGGGCATCTACCACCACGCAG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCCCGTCCGCACCTCTTaGTTCCTCATGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARPVRTS*FLMESG
Trigger: CCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCATGAGGGCTTTCACCTaGTCGGCTGGGGAGCCCGTA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCMRAFT*SAGEPV
Trigger: TACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCAT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCTCCTTGAGTCATTGCTaGAGGGCCCCAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSSLSHC*RAPAGH
Trigger: ATGCCCCGCTGGGGCCCTGCAGCAATGACTCAAGGA...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGTGCTCAGCAGGGCCTTaGGGTGCCTCTGTATCCTTG +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLCSAGP*GASVSL
Trigger: CAAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCA...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCAGAGGCGGACGAAGTaGCTCACCAGGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCQRRTK*LTRVVL
Trigger: CAAGACCACCCTGGTGAGGCACTTCGTCCGCCTCTG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTAAGTCCTTGCCGACCTaGCCATGGGCCCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACKSLPT*PWAQRR
Trigger: CCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTT...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCTGGGCTCCCCGACGTaGGGGAAGACCGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPLGSPT*GKTEQM
Trigger: CATCTGCTCGGTCTTCCCGCACGTCGGGGAGCCCAG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAAGAAGGCTGGGACGGTaGACATCAGGTACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPRRLGR*TSGTGP
Trigger: GGGCCCTGTACCTGATGTGCACCGTCCCAGCCTTCT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCAGAAGGCTGGGACGGTaGACATCAGGTACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCRRLGR*TSGTGP
Trigger: GGGCCCTGTACCTGATGTGCACCGTCCCAGCCTTCT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCCACCATGGGCCACCTaGTCGATGCGAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPPPWAT*SMRGLA
Trigger: GGCAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCATGTCCCCACCATCTTaGGGCCACCATGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSMSPPS*GHHGPP
Trigger: AGGTGGCCCATGGTGGCCGCAAGATGGTGGGGACAT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGCTGCGCTCCTGAAATaGGTGAGGAAGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCAALLK*VRKPSL
Trigger: CAGGCTGGGCTTCCTCACGCATTTCAGGAGCGCAGC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCAGCCTCCCGTCCTCTaGCTGCATGGCCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDQPPVL*LHGPLG
Trigger: GCCCAGCGGGCCATGCAGGCAGAGGACGGGAGGCTG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCGGGCCAGCTCGGTGTaGTGCAGCTCATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPRASSV*CSSCRQ
Trigger: CTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTCCCACTCAGCACGCTaGCCAGCAGCTCCATCACGG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSHSAR*PAAPSR
Trigger: CCGTGATGGAGCTGCTGGGCAGCGTGCTGAGTGGGA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGAGGGCCCCCATCAGTaGTGCCACTCCTGCGTCACT +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITAREGPHQ*CHSCVT
Trigger: AGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGACAGTGCTGTGGCAATaGATATCGCCCCGTCCATCC +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQTVLWQ*ISPRPS
Trigger: GGATGGACGGGGCGATATGCATTGCCACAGCACTGT...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGCCCCTCCCTTCTCTGTaGCATAACAGAGTACCCGTC +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQPLPSL*HNRVPV
Trigger: GACGGGTACTCTGTTATGGCACAGAGAAGGGAGGGG...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTATCACCTTTGTGGGGTaGCGTTTTGAGACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAITFVG*RFETAR
Trigger: CCTTGCAGTCTCAAAACGGCACCCCACAAAGGTGAT...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTTCTCTTGTCTGTTTTaGTCTGATGGGGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VRVRFSLTATAMARAPWSFSCLF*SDGVCV
Trigger: CACACAGACCCCATCAGAGCAAAACAGACAAGAGAA...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCCATCTCCATGCTCCTaGGCTCAGCCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARPSPCS*AQPCSS
Trigger: GCTGGAGCAGGGCTGAGCCCAGGAGCATGGAGATGG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCCATCTCCATGCTCCTaGGCTCAGCCCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIPSPCS*AQPCSS
Trigger: GCTGGAGCAGGGCTGAGCCCAGGAGCATGGAGATGG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGAGTGCCTCACCAGGGTaGTCTTGCCCATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSASPG*SCPCRP
Trigger: TGGCCGGCATGGGCAAGACCACCCTGGTGAGGCACT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCAGTGCCTCACCAGGGTaGTCTTGCCCATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACSASPG*SCPCRP
Trigger: TGGCCGGCATGGGCAAGACCACCCTGGTGAGGCACT...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTTGCCGACCTGCCCATaGGCCCAGAGGCGGACGAAG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPLPTCP*AQRRTK
Trigger: CTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCATCTTGCGGCCACCATaGGCCACCTGCTCGATGCGA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCILRPP*ATCSMR
Trigger: TCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGAT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGTTCTTGAGCAGCCCATaGAAGGCCAGACGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQFLSSP*KARRPN
Trigger: ATTGGGCCGTCTGGCCTTCCATGGGCTGCTCAAGAA...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGGGCCCCGCTCTCCATaGCCTCCTCCACGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIGPRSP*PPPRCG
Trigger: CCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGCCC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGACAGGTTGGCCTCCTaGGCACAGGCGTCGGACACC +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACDRLAS*AQASDT
Trigger: GGTGTCCGACGCCTGTGCCCAGGAGGCCAACCTGTC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCGTCTGCCAGCGCCTTaGCCCCTTGTGGTCCAATGG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIRLPAP*PLVVQW
Trigger: CCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCTGGAGAGGGTCCGGTTaGAGGCCAAGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACWRGSG*RPRPQP
Trigger: TGGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCA...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGGGTCGTGGAGGAGGTTaGCTGTCAGGTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLGRGGG*LSGPGS
Trigger: AGAACCTGGACCTGACAGCCAACCTCCTCCACGACC...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTTGGGCAGCGCCGGCCTaGATGAAGTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIWAAPA*MKFHCR
Trigger: CCTGCAGTGGAACTTCATCCAGGCCGGCGCTGCCCA...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGCTTGTCCCAGGGCCTaGGCAGCGCCGGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDACPRA*AAPAWM
Trigger: CATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAGC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGCTTTCTCCAGTGTTTaGCTACTGCAACTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPAFSSV*LLQLCV
Trigger: AACACAGAGTTGCAGTAGCCAAACACTGGAGAAAGC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATTTTCTCCACCAGTTTaGCTCCTGAGGTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPFSPPV*LLRFLQ
Trigger: CTGAAGAAACCTCAGGAGCCAAACTGGTGGAGAAAA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGACAGGCATCAGCCTCTaGGACCCGCCTAAAACAGTC +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQTGISL*DPPKTV
Trigger: GACTGTTTTAGGCGGGTCCCAGAGGCTGATGCCTGT...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCAGCCAGCAGATCCATaGGGGCTTTCACCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARQPADP*GLSPAR
Trigger: CCGAGCAGGTGAAAGCCCTCATGGATCTGCTGGCTG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCATACGCCGCTCTCAGTaGAGAGGTCGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCIRRSQ*RGRRWP
Trigger: GGGCCATCTTCGACCTCTTCACTGAGAGCGGCGTAT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGGCAGTGCAACACGTTaGTGGCCCGTGCACAGACTG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIGSATR*WPVHRL
Trigger: CAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATATTACTGGAGAACATaGGCTCTTTCAGACTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPYYWRT*ALSDSC
Trigger: ACAGGAGTCTGAAAGAGCTCATGTTCTCCAGTAATA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGGGCTCCCTCGGGACTaGTGGAGTTTTCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARGLPRD*WSFLEG
Trigger: GCCTTCGAGAAAACTCCATCAGTCCCGAGGGAGCCC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCAGGTGAAGGGAGGTaGGGGTGCGGTTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPAGEGR*GCGFLS
Trigger: TGAGAGAAAACCGCACCCTCACCTCCCTTCACCTGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCAGCGCCGGCCTGGATaGAGTTCCACTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACQRRPG*SSTAGE
Trigger: TTCACCTGCAGTGGAACTTCATCCAGGCCGGCGCTG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCAGCGCCGGCCTGGATaGAGTTCCACTGCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIQRRPG*SSTAGE
Trigger: TTCACCTGCAGTGGAACTTCATCCAGGCCGGCGCTG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGTCAAAAGCTTCCAGCTaGGCATCTGCCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALESKASS*ASAHSP
Trigger: AGGAGAATGGGCAGATGCTCAGCTGGAAGCTTTTGA...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGAATCACTGGAACCCATaGGGTAGAGCCTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: QGLSHGPGTIIPNGVALENHWNP*GRAYSE
Trigger: CTCACTGTAGGCTCTACCTCATGGGTTCCAGTGATT...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCATGGCCTCAGCATCCATaGTGGTTCCTGTCCGGATGC +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPWPQHP*WFLSGC
Trigger: GCATCCGGACAGGAACCATCATGGATGCTGAGGCCA...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCAGCCCTGCTCCAGCTaGGTGGTGGTAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACQPCSS*VVVDAL
Trigger: CAGGGCATCTACCACCACGCAGCTGGAGCAGGGCTG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCTCCTTGAGTCATTGCTaGAGGGCCCCAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACSLSHC*RAPAGH
Trigger: ATGCCCCGCTGGGGCCCTGCAGCAATGACTCAAGGA...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGTATCCTTGAGTCATTaGTGCAGGGCCCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARVSLSH*CRAPAG
Trigger: CCCCGCTGGGGCCCTGCAGCAATGACTCAAGGATAC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCAGAGGCGGACGAAGTaGCTCACCAGGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIQRRTK*LTRVVL
Trigger: CAAGACCACCCTGGTGAGGCACTTCGTCCGCCTCTG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACCTTCTTTGGGTCCGTaGAGGCCACGGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPPSLGP*RPRCWR
Trigger: TCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTAGGGCCCTGTCAGCCTaGACTTGGCTCAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIRALSA*TWLSIQ
Trigger: CTGGATGCTGAGCCAAGTGCAGGCTGACAGGGCCCT...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCACGTTGATGGCCCGTaGACAGACTGCGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPHVDGP*TDCGIG
Trigger: CCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGAGCTCATGCAGGCAGTaGAACACGTTGATGGCCCGT +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLSSCRQ*NTLMAR
Trigger: ACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCT...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCTGTTCTTCTGCAGGTaGAGCATGGAGAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCLFFCR*SMERVR
Trigger: CCGGACCCTCTCCATGCTGCACCTGCAGAAGAACAG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACTCCCATGGGCCCGATaGTGTTCTTCTGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPLPWAR*CSSAGA
Trigger: TGCACCTGCAGAAGAACAGCATCGGGCCCATGGGAG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTTTCAGACTCCTGTTCTaGTTCAAGGCATCTGCCATC +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAFRLLF*FKASAI
Trigger: GATGGCAGATGCCTTGAAGCAGAACAGGAGTCTGAA...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGGCACACAGCTTCTCGTaGGTGTTGAGATCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLAHSFS*VLRSRK
Trigger: CTTCCGGGATCTCAACACCCACGAGAAGCTGTGTGC...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCAGGCCACGGTGTTaGAGAAGTCCAGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARCRPRC*RSPEAS
Trigger: GGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACTGTCAGCCTGCACTTaGCTCAGCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPLSACT*LSIQPR
Trigger: TCTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCGCCTTGGCCCCTTGTaGTCCAATGGAGTTACCGCG +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACRLGPL*SNGVTA
Trigger: CGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCTTCCCCTAGCACCTaGGCGCCTGAAGCACCAATT +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPASPST*APEAPI
Trigger: AATTGGTGCTTCAGGCGCCCAGGTGCTAGGGGAAGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCCATTTGCCAGGGCTTTaGCTCCAGCCACCCCAATGG +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSHLPGL*LQPPQW
Trigger: CCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATG...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTATACGCCGCTCTCAGTaGAGAGGTCGAAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIIRRSQ*RGRRWP
Trigger: GGGCCATCTTCGACCTCTTCACTGAGAGCGGCGTAT...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGGTTGGTGTCCAGCCTaGGCTTCCGGCAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACGWCPA*ASGSRA
Trigger: TGCTCTACTGCCGGAAGCTCAGGCTGGACACCAACC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCAGGTCAGGGTGCGGTTaGTCTTCAAAGCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCRSGCG*SSKRLP
Trigger: TGGCAGACGCTTTGAAGATCAACCGCACCCTGACCT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCAGGTCAGGGTGCGGTTaGTCTTCAAAGCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSRSGCG*SSKRLP
Trigger: TGGCAGACGCTTTGAAGATCAACCGCACCCTGACCT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCGAGCAGATAGGTGACTaGGGGCAGGCTGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACEQIGD*GQAESP
Trigger: AGGTGACTCAGCCTGCCCTCAGTCACCTATCTGCTC...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTGCTCCTCACGGGCTTaGGGTGGCAGCTCATCTCAG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPCSSRA*GGSSSQ
Trigger: CTGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGTAAGGATGATACCCTaGAATCTTCTTCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPVRMIP*NLLLEK
Trigger: CTTCTCAAGAAGAAGATTTCAGGGTATCATCCTTAC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTATGAGGGCTTTCACCTaGTCGGCTGGGGAGCCCGTA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACMRAFT*SAGEPV
Trigger: TACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCAT...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCAGCAGGGCCTTGCGGTaGCTCTGTATCCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSSRALR*LCILES
Trigger: TGACTCAAGGATACAGAGGCACCGCAAGGCCCTGCT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCCTTCTTTGGGTCCGTaGAGGCCACGGTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACPSLGP*RPRCWR
Trigger: TCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGTCCTCGGGGAACATCTaGTCCAAACACACCTTGATC +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQSSGNI*SKHTLI
Trigger: GATCAAGGTGTGTTTGGAGCAGATGTTCCCCGAGGA...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTGCGAGGGCTTGCCTTaGCCTTCTCCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDCEGLP*PSPAPP
Trigger: GGGAGGGGCAGGAGAAGGGCAAGGCAAGCCCTCGCA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCTGCACGGGGCGCCCTaGAGCAGAGCGAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDLHGAP*SRARST
Trigger: TGTAGACCTCGCTCTGCTGCAGGGCGCCCCGTGCAG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGATGGCCTCCTCCACGCTaGGGGCCAGCTCGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARWPPPR*GPARCA
Trigger: AGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCA...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCCAGGGCAGCGCGGTaGGCGGGACCAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMARAAR*AGPVSL
Trigger: CAGGCTGACTGGTCCCGCGCACCGCGCTGCCCTGGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGATCTTCAAAGCGTCTaGCAGCGCCTTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIDLQSV*QRLGPL
Trigger: CAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCTGCTTCAAGGCATCTaGCATCCGCTGGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPILLQGI*HPLGSH
Trigger: ATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGCTTCAAGGCATCTaGCATCCGCTGGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACLLQGI*HPLGSH
Trigger: ATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCCAGGTTCTTCAGGGTaGTGTTGGCGCAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACPGSSG*CWRRGH
Trigger: ATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCTGGACCACTCCTaGAGCAGAAGAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARCLDHS*SRRGAH
Trigger: GTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGACCAGCCTCCTGTACTaGTCAGCTTTCAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLTSLLY*SAFRPL
Trigger: CAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGT...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGCATAGAGGCTCAGCTTaGCTGTCTCCATGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLHRGSA*LSPWKL
Trigger: CAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATG...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACAGGGACAGCAAGACTaGGGGGCCTGGGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARQGQQD*GAWGRP
Trigger: TGGACGCCCCCAGGCCCCCCAGTCTTGCTGTCCCTG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTGCAGGCCACGGTGTTaGAGAAGTCCAGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACCRPRC*RSPEAS
Trigger: GGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACAGGCCCCCTGGGATCTaGCCAGATGCACTGGGACGG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDRPPGI*PDALGR
Trigger: CCGTCCCAGTGCATCTGGCCAGATCCCAGGGGGCCT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCCTGGTGCTCGCCTTaGGCCAGCAGGGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMAWCSP*ASREPA
Trigger: GGCCGGCTCCCTGCTGGCCCAAGGCGAGCACCAGGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTCCATCACGGGGTCCTaGAACTGGTTGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSITGS*NWLVSS
Trigger: GCTGGACACCAACCAGTTCCAGGACCCCGTGATGGA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTCCGCTGGGCTCCCATaGGCCCGATGCTGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACSAGLP*ARCCSS
Trigger: AGAAGAACAGCATCGGGCCCATGGGAGCCCAGCGGA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCCTCAGCCAGGGCCTTaGCACCTCCATCACCAATAC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIPQPGP*HLHHQY
Trigger: GTATTGGTGATGGAGGTGCCAAGGCCCTGGCTGAGG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTCACTGCCACTGCGATaGCCCGGGCACCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDSLPLR*PGHPGR
Trigger: ACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGCCGGAGTCCCCAATGTaGTTTCCCTGGAGATTGATA +
Preference number: 4 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQPESPM*FPWRLI
Trigger: TATCAATCTCCAGGGAAACCACATTGGGGACTCCGG...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGCAGGAACTCAATGGATaGGGCTCAGCCTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLQELNG*GSAFRC
Trigger: ACAACGGAAGGCTGAGCCCCATCCATTGAGTTCCTG...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGCCCCAGGAACTCAATaGATGGGGCTCAGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACAPGTQ*MGLSLP
Trigger: CGGAAGGCTGAGCCCCATCCATTGAGTTCCTGGGGC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCAGCTTTCAGGCCTTTaGCCCCTAGTCCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPQLSGL*PLVPWG
Trigger: CCCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGGGCTAGCTGGCTCTaGTGTGTGCCTGACGACAGA +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARWASWL*CVPDDR
Trigger: TCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTTGGGCTAGCTGGCTCTaGTGTGTGCCTGACGACAGA +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIWASWL*CVPDDR
Trigger: TCTGTCGTCAGGCACACACCAGAGCCAGCTAGCCCA...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTCTGTGTGGGCTAGCTaGCTCTGGTGTGTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSVWAS*LWCVPD
Trigger: GTCAGGCACACACCAGAGCCAGCTAGCCCACACAGA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTTGGCCCCTTTGTTACTaGTCTGGTTCTCCGCCAAGC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIWPLCY*SGSPPS
Trigger: GCTTGGCGGAGAACCAGATCAGTAACAAAGGGGCCA...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCAGGTCAGACTTCTGTTaGCCAAGAGGGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSRSDFC*PRGIWP
Trigger: TGGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGCAGGTGAAGGGAGGTaGGGGTGCGGTTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACAGEGR*GCGFLS
Trigger: TGAGAGAAAACCGCACCCTCACCTCCCTTCACCTGC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTCCTGGGCTCAGCCCTaGTCCAGCTGCGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDSWAQP*SSCVVV
Trigger: TACCACCACGCAGCTGGAGCAGGGCTGAGCCCAGGA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCCCGTCCGCACCTCTTaGTTCCTCATGGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDPVRTS*FLMESG
Trigger: CCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCCTGGCCGGCCTCCCTaGCCGTCCGCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMPGRPP*PSAPLA
Trigger: AGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCTGGCCGGCCTCCCTaGCCGTCCGCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPGRPP*PSAPLA
Trigger: AGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCAGCAGGGCCTTGCGGTaGCTCTGTATCCTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACSRALR*LCILES
Trigger: TGACTCAAGGATACAGAGGCACCGCAAGGCCCTGCT...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTGCTCAGCAGGGCCTTaGGGTGCCTCTGTATCCTTG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACCSAGP*GASVSL
Trigger: CAAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGATGGCCCTCCTGGATaGGCCATAGTAATACGCGGC +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACDGPPG*AIVIRG
Trigger: GCCGCGTATTACTATGGCGCATCCAGGAGGGCCATC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACGGGCCAGCTCGGTGTaGTGCAGCTCATGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARRASSV*CSSCRQ
Trigger: CTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCTCCCATGGGCCCGATaGTGTTCTTCTGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPLPWAR*CSSAGA
Trigger: TGCACCTGCAGAAGAACAGCATCGGGCCCATGGGAG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGAGGGCCCCCATCAGTaGTGCCACTCCTGCGTCACT +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDEGPHQ*CHSCVT
Trigger: AGTGACGCAGGAGTGGCAGCACTGATGGGGGCCCTC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTACCTTCAGAGCATTTaGCAGGGCTTTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCYLQSI*QGFGSS
Trigger: GCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCAGCCCCGACCTTCTaGAGCCCCACCGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMAAPTF*SPTEPT
Trigger: GGTGGGCTCGGTGGGGCTGCAGAAGGTCGGGGCTGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTATCACATTTCAACAGTaGACGTGGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAITFQQ*TWEHLS
Trigger: AGACAAATGCTCCCACGTGCACTGTTGAAATGTGAT...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGTACCCGTCACCCCCTaGCTGGACCACTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIVPVTP*LDHSCS
Trigger: GCTGCAGGAGTGGTCCAGGCAGGGGGTGACGGGTAC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCCTCTTGCTTCCTCATaGAGTCGGGGATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACPLASS*SRGSPP
Trigger: TGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCATGTTGGTGATCAGGTaGTCCACCGGGATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCMLVIR*STGISF
Trigger: GAAGGAGATCCCGGTGGACCACCTGATCACCAACAT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCAGCCCAGAAGGGCCTaGTCCTCGGGGAACATCTGC +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDQPRRA*SSGNIC
Trigger: GCAGATGTTCCCCGAGGACCAGGCCCTTCTGGGCTG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCGTCCTCTGCCTGCATaGCCCGCTGGGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMRPLPA*PAGLRS
Trigger: GGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCGGGACCAGTCAGCCTaGCCAGGGCCCCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTRDQSA*PGPRSP
Trigger: TGGAGAGCGGGGCCCTGGCCAGGCTGACTGGTCCCG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCCCCTTGTGGTCCAATaGAGTTACCGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACPLVVQ*SYRGGP
Trigger: TGGACCTCCGCGGTAACTCCATTGGACCACAAGGGG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTAGGCTGAGGAGGGTCTaGTTGGTGCAGAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIRLRRV*LVQRAP
Trigger: GGGGGCCCTCTGCACCAACCAGACCCTCCTCAGCCT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCCTCTGAGATCATCCTaGCCCCGGAGTCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPPLRSS*PRSPQC
Trigger: ACATTGGGGACTCCGGGGCCAGGATGATCTCAGAGG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCAGCAGCCCCTCCAGTaGGGCCCCAGGAACTCAATG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDQQPLQ*GPRNSM
Trigger: CATTGAGTTCCTGGGGCCCCACTGGAGGGGCTGCTG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACTGTGGCCACAGCAGTaGCTTTGGAAGCCTAGTAAG +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPLWPQQ*LWKPSK
Trigger: CTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACAG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTGATGGGGTCTGTGTaGGCTAGCTGGCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACLMGSV*ASWLWC
Trigger: ACACCAGAGCCAGCTAGCCCACACAGACCCCATCAG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CAA 72 bp TCTGTTACCCCTACCAAACGGATGCTCCTCACGGGCTaGAGGTGGCAGCTCATCTCAGAGCATGGGATGATT +
Preference number: 4 (lower is better)
Translates to: SVTPTKRMLLTG*RWQLISEHGMI
Trigger: AATCATCCCATGCTCTGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCATCCGTTTGGTAGGGGTAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CAA 72 bp GATCACATTTCAACAGTGCACGTGGGAGCATTTGTCTaGATGGCCTCTGAGATCATCCTGGCCCCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DHISTVHVGAFV*MASEIILAPES
Trigger: GGACTCCGGGGCCAGGATGATCTCAGAGGCCATCAAGACAAATGCTCCCACGTGCACTGTTGAAATGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAACACGTATTTCTTCTTaGGCAGCCCATGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPTRISS*AAHGRP
Trigger: TGGCCTTCCATGGGCTGCTCAAGAAGAAATACGTGT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCACACGTATTTCTTCTTaGGCAGCCCATGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSTRISS*AAHGRP
Trigger: TGGCCTTCCATGGGCTGCTCAAGAAGAAATACGTGT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCCACTCCTGCGTCACTaGTGGAATTGCTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACPLLRH*WNCSAG
Trigger: ACCTGCAGAGCAATTCCATCAGTGACGCAGGAGTGG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCACTCCAGCCTGGGTaGCAGATTCTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPALQPG*QILSQK
Trigger: TTTTTGAGACAGAATCTGTCACCCAGGCTGGAGTGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCAGACTGGGGGCATGTaGTGTCTGTGTGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARQTGGM*CLCVPL
Trigger: TAATGGGACACACAGACATCACATGCCCCCAGTCTG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCACCAGTTTGGCTCCTaGGGTTTCTTCAGCGTTAGG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARHQFGS*GFFSVR
Trigger: CCTAACGCTGAAGAAACCTCAGGAGCCAAACTGGTG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGATCGTGTTCCCTCAGCTaGAGGTCCGTCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARSCSLS*RSVRPS
Trigger: GGAGGGCCTGACGGACCTGCAGCTGAGGGAACACGA...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCAGTGCTGCCACTCCTaGGTCACTGATGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARQCCHS*VTDGIA
Trigger: AGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGCTGAGTCACCTCTCTaGGCCTTGGTGTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCAESPL*ALVSSF
Trigger: AAATGAAGACACCAAGGCGCAGAGAGGTGACTCAGC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAATCACCTTTGTGGGGTaGCGTTTTGAGACTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPITFVG*RFETAR
Trigger: CCTTGCAGTCTCAAAACGGCACCCCACAAAGGTGAT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCCAGTGTTTGGCTACTaGAACTCTGTGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCPVFGY*NSVFCQ
Trigger: CTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCTGCTGCGCCACAGGTaGCCTAGCGCCATCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMLLRHR*PSAIPV
Trigger: CACGGGGATGGCGCTAGGCCACCTGTGGCGCAGCAG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTTCTTGAGCAGCCCATaGAAGGCCAGACGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPFLSSP*KARRPN
Trigger: ATTGGGCCGTCTGGCCTTCCATGGGCTGCTCAAGAA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACTAGTCCCTTGGGGGTaGCCCCTCCCTTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARLVPWG*PLPSLC
Trigger: GCACAGAGAAGGGAGGGGCCACCCCCAAGGGACTAG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGGCCACAGCAGTaGCTTTGGAAGCCTAGTAAG +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACLWPQQ*LWKPSK
Trigger: CTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACAG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCAGCCAGCAGATCCATaGGGGCTTTCACCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIQPADP*GLSPAR
Trigger: CCGAGCAGGTGAAAGCCCTCATGGATCTGCTGGCTG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGGAAGACCGAGCAGATaGGTCGGTCGGCACACAGCT +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIGRPSR*VGRHTA
Trigger: AGCTGTGTGCCGACCGACTCATCTGCTCGGTCTTCC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGAAGGACGCCCTGGCTaGGGCTCAGGGACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMEGRPG*GSGTGW
Trigger: CCAACCTGTCCCTGAGCCTCAGCCAGGGCGTCCTTC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTAGGTCAGACTTCTGTTaGCCAAGAGGGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACRSDFC*PRGIWP
Trigger: TGGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCT...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAAGTTCCACTGCAGGTaGAGGGAGGTGAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARKFHCR*REVRVR
Trigger: CCGCACCCTCACCTCCCTTCACCTGCAGTGGAACTT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACATCCCTGTGCCAGCCTaGGTTCTCAGGACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDIPVPA*VLRTRD
Trigger: ATCCCTGGTCCTGAGAACTCAGGCTGGCACAGGGAT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTAAGCCTAGTAAGGAATaGCATCACTGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIKPSKE*HHCQVQ
Trigger: CTGCACCTGGCAGTGATGTCATTCCTTACTAGGCTT...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTTCCTCGGGGAACATCTaGTCCAAACACACCTTGATC +
Preference number: 4 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPISSGNI*SKHTLI
Trigger: GATCAAGGTGTGTTTGGAGCAGATGTTCCCCGAGGA...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCTGCACGGGGCGCCCTaGAGCAGAGCGAGGTCTACA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMLHGAP*SRARST
Trigger: TGTAGACCTCGCTCTGCTGCAGGGCGCCCCGTGCAG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCTGTTCTTCTGCAGGTaGAGCATGGAGAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDLFFCR*SMERVR
Trigger: CCGGACCCTCTCCATGCTGCACCTGCAGAAGAACAG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCGCTGAGTCACCTCTCTaGGCCTTGGTGTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACAESPL*ALVSSF
Trigger: AAATGAAGACACCAAGGCGCAGAGAGGTGACTCAGC...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACGGGATCTCCTTCTTTaGGTCCGTGCAGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARRDLLL*VRAGHG
Trigger: ACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATCTTGCGGCCACCATaGGCCACCTGCTCGATGCGA +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIILRPP*ATCSMR
Trigger: TCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCCTGCATGGCCCGCTaGGCTGCGCTCCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMACMAR*AALLKC
Trigger: GCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGGCTCAGGGACAGGTTaGCCTCCTGGGCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMGSGTG*PPGHRR
Trigger: ACGCCTGTGCCCAGGAGGCCAACCTGTCCCTGAGCC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCCCTTTGTTACTGATCTaGTTCTCCGCCAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSPLLLI*FSAKLI
Trigger: GATCAGCTTGGCGGAGAACCAGATCAGTAACAAAGG...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCGCCTTGGCCCCTTGTaGTCCAATGGAGTTACCGCG +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIRLGPL*SNGVTA
Trigger: CGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTCTGCAGGTGCAGCATaGAGAGGGTCCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSISAGAA*RGSGWR
Trigger: CCTCCAACCGGACCCTCTCCATGCTGCACCTGCAGA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTTCCAGACAGTGCTGTaGCAATGCATATCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPFQTVL*QCISPR
Trigger: ACGGGGCGATATGCATTGCCACAGCACTGTCTGGAA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGATATGCTGGAGCCTGTaGTTTCCAGACAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARICWSL*FPDSAV
Trigger: CACAGCACTGTCTGGAAACCACAGGCTCCAGCATAT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAACCAACCAACCGTGTaGGGGCCGAGAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARNQPTV*GPRAVQ
Trigger: CTGCACTGCTCTCGGCCCCCACACGGTTGGTTGGTT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCAGGAACTCAATGGATaGGGCTCAGCCTTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPQELNG*GSAFRC
Trigger: ACAACGGAAGGCTGAGCCCCATCCATTGAGTTCCTG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTAACATTTTTAAAGGTTaGGGACACATGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVLLQGICHPLGSHGPDANIFKG*GHMKSS
Trigger: TGAGGACTTCATGTGTCCCCAACCTTTAAAAATGTT...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCTAGCGCCATCCCCGTaGGCCTGCAGAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNLAPSP*ACRRLG
Trigger: TCCCAGCCTTCTGCAGGCTCACGGGGATGGCGCTAG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAGAAGCAGTAGGCCACTaGCGATGCCAACGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGAREAVGH*RCQRLL
Trigger: GAGGAGACGTTGGCATCGTCAGTGGCCTACTGCTTC...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCGGCCAGGAGGGCATTaGCCCTCGGAGACAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNRPGGH*PSETRG
Trigger: GCCTCTTGTCTCCGAGGGTCAATGCCCTCCTGGCCG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATCCCTGTGCCAGCCTaGGTTCTCAGGACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIIPVPA*VLRTRD
Trigger: ATCCCTGGTCCTGAGAACTCAGGCTGGCACAGGGAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGCTCTGGTGTGTGCCTaGCGACAGACTGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDALVCA*RQTELL
Trigger: AAGGAGTTCAGTCTGTCGTCAGGCACACACCAGAGC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTTGTCTGTTTTGCTCTaGTGGGGTCTGTGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACLSVLL*WGLCGL
Trigger: TAGCCCACACAGACCCCATCAGAGCAAAACAGACAA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GCTCCGTCATCCCCGATGGCGTTCTCCTGTAAATCTAAGCTGGTGAGGCTCCTGCAATTTTATGGTACATaGATTTCACCCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: APSSPMAFSCKSKLVRLLQFYGT*ISPSGR
Trigger: CCTCCCTGAGGGTGAAATTCATGTACCATAAAATTG...CAGGAGCCTCACCAGCTTAGATTTACAGGAGAACGCCATCGGGGATGACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGGGCGTCCATCTCCATaGTCCTGGGCTCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNGRPSP*SWAQPC
Trigger: GCAGGGCTGAGCCCAGGAGCATGGAGATGGACGCCC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTGGGATCTGGCCAGATaGACTGGGACGGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIWDLAR*TGTGGD
Trigger: ATCACCTCCCGTCCCAGTGCATCTGGCCAGATCCCA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGATGGCCCTCCTGGATaGGCCATAGTAATACGCGGC +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIDGPPG*AIVIRG
Trigger: GCCGCGTATTACTATGGCGCATCCAGGAGGGCCATC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTTCAGACTCCTGTTCTaGTTCAAGGCATCTGCCATC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARFRLLF*FKASAI
Trigger: GATGGCAGATGCCTTGAAGCAGAACAGGAGTCTGAA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGGAGGGTCTGGTTGGTaGAGAGGGCCCCCATCAGTG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMGGSGW*RGPPSV
Trigger: CACTGATGGGGGCCCTCTGCACCAACCAGACCCTCC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTGTGGTTTCCAGACAGTaGTGTGGCAATGCATATCGC +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPVVSRQ*CGNAYR
Trigger: GCGATATGCATTGCCACAGCACTGTCTGGAAACCAC...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCCCTGGAGATTGATATaGTGGAGCCTGTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACPWRLI*WSLWFP
Trigger: TGGAAACCACAGGCTCCAGCATATCAATCTCCAGGG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTCTCCCGGGCCTCGATaGTGCTCCAGGGACAGCAAG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTSPGPR*CSRDSK
Trigger: CTTGCTGTCCCTGGAGCAGCATCGAGGCCCGGGAGA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359128.10
CDS-3UTR GCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGATGCCTGGACCACTCCTaGAGCAGAAGAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARCLDHS*SRRGAH
Trigger: GTGAGCTCCTCTTCTGCTGCAGGAGTGGTCCAGGCA...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCCCCTCCCTTCTCTGTaGCATAACAGAGTACCCGTC +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDPLPSL*HNRVPV
Trigger: GACGGGTACTCTGTTATGGCACAGAGAAGGGAGGGG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCATCCAACACAAACAGCTaGAGGAATTGGTGCCACATA +
Preference number: 4 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPSNTNS*RNWCHI
Trigger: TATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCCTCAGACAGAAACAATaGAAACCAGCAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCLRQKQ*KPADRA
Trigger: TGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAG...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCTGTCAGCCTGCACTTaGCTCAGCATCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSILSACT*LSIQPR
Trigger: TCTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGAGCCTGCAGAAGGCTaGGACGGTGCACATCAGGTA +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIEPAEG*DGAHQV
Trigger: TACCTGATGTGCACCGTCCCAGCCTTCTGCAGGCTC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAGAGGGCATGAGCGATaGCCTGGGCTCCCTCGGGAC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNRGHER*PGLPRD
Trigger: GTCCCGAGGGAGCCCAGGCCATCGCTCATGCCCTCT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCGTCATCCCCGATaGCGTTCTCCTGTAAATCTA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACLRHPR*RSPVNL
Trigger: TAGATTTACAGGAGAACGCCATCGGGGATGACGGAG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGGAGATTGATATGCTaGAGCCTGTGGTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: CGHSSGFGSLVRNDITARWRLIC*SLWFPD
Trigger: GTCTGGAAACCACAGGCTCCAGCATATCAATCTCCA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGGTTGGTGTCCAGCCTaGGCTTCCGGCAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTGWCPA*ASGSRA
Trigger: TGCTCTACTGCCGGAAGCTCAGGCTGGACACCAACC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGGGCTCCCTCGGGACTaGTGGAGTTTTCTCGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMGLPRD*WSFLEG
Trigger: GCCTTCGAGAAAACTCCATCAGTCCCGAGGGAGCCC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTGAGTCTCCGGAGACTTaGGTTTACCTTCAGAGCATT +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPESPET*VYLQSI
Trigger: AATGCTCTGAAGGTAAACTCAAGTCTCCGGAGACTC...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGAGTCTCCGGAGACTTaGGTTTACCTTCAGAGCATT +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACESPET*VYLQSI
Trigger: AATGCTCTGAAGGTAAACTCAAGTCTCCGGAGACTC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGTGCTCCTCACGGGCTTaGGGTGGCAGCTCATCTCAG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMCSSRA*GGSSSQ
Trigger: CTGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCA...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGTATCCTTGAGTCATTaGTGCAGGGCCCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMVSLSH*CRAPAG
Trigger: CCCCGCTGGGGCCCTGCAGCAATGACTCAAGGATAC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTATGTCCCCACCATCTTaGGGCCACCATGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTMSPPS*GHHGPP
Trigger: AGGTGGCCCATGGTGGCCGCAAGATGGTGGGGACAT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGGCCCCCATCAGTGCTaGCACTCCTGCGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMGPHQC*HSCVTD
Trigger: ATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACACCAGCCTCCTGTACTaGTCAGCTTTCAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDTSLLY*SAFRPL
Trigger: CAAAGGCCTGAAAGCTGAGCAGTACAGGAGGCTGGT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCTGCAACTCTGTGTTCTaGCAGTCTCTTAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: SLQHKQLQELVPHRGSACCNSVF*QSLNSD
Trigger: GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCA...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCAGGGGACTCTCAGGTaGCAGAATTGGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIQGTLR*QNWGLL
Trigger: AAGGAGTCCCCAATTCTGGCACCTGAGAGTCCCCTG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCAGCCCAGAAGGGCCTaGTCCTCGGGGAACATCTGC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNQPRRA*SSGNIC
Trigger: GCAGATGTTCCCCGAGGACCAGGCCCTTCTGGGCTG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCTAACGGTGTTGCCCTaGAGGCTCAGGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMLTVLP*RLREVR
Trigger: CCTGACCTCCCTGAGCCTCCAGGGCAACACCGTTAG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359128.10
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCCAAGGCCTCAGCCATaGACCTGGCACCATCATCCC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMPRPQP*TWHHHP
Trigger: GGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTGG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCAGCAGCCCCTCCAGTaGGGCCCCAGGAACTCAATG +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNQQPLQ*GPRNSM
Trigger: CATTGAGTTCCTGGGGCCCCACTGGAGGGGCTGCTG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGTAATCCCAGTACTTTaGGAGGCCCAGGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDVIPVL*EAQADG
Trigger: TCCATCAGCCTGGGCCTCCCAAAGTACTGGGATTAC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGGGGACTCCTTTAATTaGAAGGGAGCTAAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACGDSFN*KGAKGS
Trigger: AGACCCTTTAGCTCCCTTCCAATTAAAGGAGTCCCC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CAA 72 bp AGACTTGAGTTTACCTTCAGAGCATTTGCCAGGGCTTaGGCTCCAGCCACCCCAATGGCATTTCCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: RLEFTFRAFARA*APATPMAFPLK
Trigger: CTTAAGAGGAAATGCCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAAACTCAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGTGCCTCTGTATCCTTaGGTCATTGCTGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTVPLYP*VIAAGP
Trigger: GGGCCCTGCAGCAATGACTCAAGGATACAGAGGCAC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCACTGGGACGGGAGGTaGTCCAGATGGAAACTTCCG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMHWDGR*SRWKLP
Trigger: CGGAAGTTTCCATCTGGATCACCTCCCGTCCCAGTG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAAGTTCCACTGCAGGTaGAGGGAGGTGAGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNKFHCR*REVRVR
Trigger: CCGCACCCTCACCTCCCTTCACCTGCAGTGGAACTT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTGTATGATCATTATTTaGAAAGGGAGAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCCMIII*KGREGG
Trigger: TCCTCCCTCTCTCCCTTTTCAAATAATGATCATACA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCTGCCACAAACTCCTaGAGGGACAGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMAATNS*RDRWVK
Trigger: CTTCACCCACCTGTCCCTGCAGGAGTTTGTGGCAGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGCTGCCACAAACTCCTaGAGGGACAGGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTAATNS*RDRWVK
Trigger: CTTCACCCACCTGTCCCTGCAGGAGTTTGTGGCAGC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGATCTTCAAAGCGTCTaGCAGCGCCTTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMDLQSV*QRLGPL
Trigger: CAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCAGTGCTGCCACTCCTaGGTCACTGATGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIQCCHS*VTDGIA
Trigger: AGCAATTCCATCAGTGACGCAGGAGTGGCAGCACTG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGGCCCCCATCAGTGCTaGCACTCCTGCGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNGPHQC*HSCVTD
Trigger: ATCAGTGACGCAGGAGTGGCAGCACTGATGGGGGCC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATTGTGTTGACCTTCAGTaGACGGGCCACCGCACACGC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNCVDLQ*TGHRTR
Trigger: GCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACA...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTCCAACACAAACAGCTaGAGGAATTGGTGCCACATA +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACSNTNS*RNWCHI
Trigger: TATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTTCTCTTGTCTGTTTTaGTCTGATGGGGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPFSCLF*SDGVCV
Trigger: CACACAGACCCCATCAGAGCAAAACAGACAAGAGAA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGAGCCTGCAGAAGGCTaGGACGGTGCACATCAGGTA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMEPAEG*DGAHQV
Trigger: TACCTGATGTGCACCGTCCCAGCCTTCTGCAGGCTC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCCCCTTGTGGTCCAATaGAGTTACCGCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMPLVVQ*SYRGGP
Trigger: TGGACCTCCGCGGTAACTCCATTGGACCACAAGGGG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCTTCCCCTAGCACCTaGGCGCCTGAAGCACCAATT +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMASPST*APEAPI
Trigger: AATTGGTGCTTCAGGCGCCCAGGTGCTAGGGGAAGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCATTTGCCAGGGCTTTaGCTCCAGCCACCCCAATGG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTHLPGL*LQPPQW
Trigger: CCATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACATATGCTGGAGCCTGTaGTTTCCAGACAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDICWSL*FPDSAV
Trigger: CACAGCACTGTCTGGAAACCACAGGCTCCAGCATAT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCTCTGAGATCATCCTaGCCCCGGAGTCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPLRSS*PRSPQC
Trigger: ACATTGGGGACTCCGGGGCCAGGATGATCTCAGAGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAACCAACCAACCGTGTaGGGGCCGAGAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNNQPTV*GPRAVQ
Trigger: CTGCACTGCTCTCGGCCCCCACACGGTTGGTTGGTT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTGTGTGTCCCATTATTaGCGATGTTCAATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCCVSHY*RCSILS
Trigger: TGACAGAATTGAACATCGCCAATAATGGGACACACA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTTTTCTCCACCAGTTTaGCTCCTGAGGTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACFSPPV*LLRFLQ
Trigger: CTGAAGAAACCTCAGGAGCCAAACTGGTGGAGAAAA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATTGGCCTCCACCTGTGTaGAGTCGTGTTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNWPPPV*SRVPSA
Trigger: AGCTGAGGGAACACGACTTCACACAGGTGGAGGCCA...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGCTTCTCGTGGGTGTTaGGATCCCGGAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNASRGC*DPGRSE
Trigger: CTCTGACCTTCCGGGATCTCAACACCCACGAGAAGC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGAAGCAGTAGGCCACTaGCGATGCCAACGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNEAVGH*RCQRLL
Trigger: GAGGAGACGTTGGCATCGTCAGTGGCCTACTGCTTC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTATTACTGGAGAACATaGGCTCTTTCAGACTCCTGT +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACYYWRT*ALSDSC
Trigger: ACAGGAGTCTGAAAGAGCTCATGTTCTCCAGTAATA...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTAAGGTTGGGGACACATaGAGTCCTCAGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIKVGDT*SPQGVK
Trigger: CTTTACACCCTGAGGACTTCATGTGTCCCCAACCTT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGCACTCCAGCCTGGGTaGCAGATTCTGTCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIALQPG*QILSQK
Trigger: TTTTTGAGACAGAATCTGTCACCCAGGCTGGAGTGC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGAGCCTACAGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMEPTVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGTAGGCTC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGAGCCTACAGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTEPTVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACTGTAGGCTC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAGTCCAGAGGCGTCCTaGACTCATCCAAGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNSPEAS*THPSRP
Trigger: TGGACGGCTTGGATGAGTGCAGGACGCCTCTGGACT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATAGTAATACGCGGCTaGCACAAACTCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIIVIRG*HKLLQG
Trigger: TCCCTGCAGGAGTTTGTGGCAGCCGCGTATTACTAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGAGCTCATGCAGGCAGTaGAACACGTTGATGGCCCGT +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMSSCRQ*NTLMAR
Trigger: ACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGACAGTGCTGTGGCAATaGATATCGCCCCGTCCATCC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMTVLWQ*ISPRPS
Trigger: GGATGGACGGGGCGATATGCATTGCCACAGCACTGT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGTGGTTTCCAGACAGTaGTGTGGCAATGCATATCGC +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIVVSRQ*CGNAYR
Trigger: GCGATATGCATTGCCACAGCACTGTCTGGAAACCAC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCAGGGGACTCTCAGGTaGCAGAATTGGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTQGTLR*QNWGLL
Trigger: AAGGAGTCCCCAATTCTGGCACCTGAGAGTCCCCTG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATTCCATCACGGGGTCCTaGAACTGGTTGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNSITGS*NWLVSS
Trigger: GCTGGACACCAACCAGTTCCAGGACCCCGTGATGGA...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCCTCAGCCAGGGCCTTaGCACCTCCATCACCAATAC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNPQPGP*HLHHQY
Trigger: GTATTGGTGATGGAGGTGCCAAGGCCCTGGCTGAGG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACTCCAGCCACCCCAATaGCATTTCCTCTTAAGTCGA +
Preference number: 4 (lower is better)
Translates to: THYINIIAVRPRGLSGARLQPPQ*HFLLSR
Trigger: TCGACTTAAGAGGAAATGCCATTGGGGTGGCTGGAG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTGGAGATTGATATGCTaGAGCCTGTGGTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDWRLIC*SLWFPD
Trigger: GTCTGGAAACCACAGGCTCCAGCATATCAATCTCCA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCCAATGTGGTTTCCCTaGAGATTGATATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDPMWFP*RLICWS
Trigger: GCTCCAGCATATCAATCTCCAGGGAAACCACATTGG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCAACATTTTTAAAGGTTaGGGACACATGAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCNIFKG*GHMKSS
Trigger: TGAGGACTTCATGTGTCCCCAACCTTTAAAAATGTT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTCAGTGTCACGTGTCTaGAAGGAAATTGTATTCATT +
Preference number: 4 (lower is better)
Translates to: GHSSGFGSLVRNDITARCSVSRV*KEIVFI
Trigger: AATGAATACAATTTCCTTCCAGACACGTGACACTGA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCTAACGGTGTTGCCCTaGAGGCATGTTGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNLTVLP*RHVGQA
Trigger: AGCCTGGCCAACATGCCTCCAGGGCAACACCGTTAG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGGCCAAGCTGATCTTCTaGATGCGACAGTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMAKLIF*MRQSFP
Trigger: TGGGAAGGACTGTCGCATTCAGAAGATCAGCTTGGC...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATATCTGCCCATTCTCCTaGTCCGTCCACCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNICPFS*SVHQDH
Trigger: GTGATCCTGGTGGACGGATCAGGAGAATGGGCAGAT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTGTAAGGATGATACCCTaGAATCTTCTTCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACVRMIP*NLLLEK
Trigger: CTTCTCAAGAAGAAGATTTCAGGGTATCATCCTTAC...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCCGATGCTGTTCTTCTaGAGGTGCAGCATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNPMLFF*RCSMER
Trigger: CCTCTCCATGCTGCACCTGCAGAAGAACAGCATCGG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCATAGAGGCTCAGCTTaGCTGTCTCCATGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMHRGSA*LSPWKL
Trigger: CAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCAACTGTCATAAATACTaGAAGACCCATGTTCAGATT +
Preference number: 4 (lower is better)
Translates to: PILLIRPPGSHFNSARGSNCHKY*KTHVQI
Trigger: AATCTGAACATGGGTCTTGCAGTATTTATGACAGTT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGCACACAGCTTCTCGTaGGTGTTGAGATCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNAHSFS*VLRSRK
Trigger: CTTCCGGGATCTCAACACCCACGAGAAGCTGTGTGC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGATGTTGGTGATCAGGTaGTCCACCGGGATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMMLVIR*STGISF
Trigger: GAAGGAGATCCCGGTGGACCACCTGATCACCAACAT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCGAAGATGGCCCTCCTaGATGCGCCATAGTAATACG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTRRWPS*MRHSNT
Trigger: CGTATTACTATGGCGCATCCAGGAGGGCCATCTTCG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCGAAGATGGCCCTCCTaGATGCGCCATAGTAATACG +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMRRWPS*MRHSNT
Trigger: CGTATTACTATGGCGCATCCAGGAGGGCCATCTTCG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTCCTTTGTTACTGATCTaGTTCTCCGCCAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIPLLLI*FSAKLI
Trigger: GATCAGCTTGGCGGAGAACCAGATCAGTAACAAAGG...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTTCCAGACAGTGCTGTaGCAATGCATATCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTFQTVL*QCISPR
Trigger: ACGGGGCGATATGCATTGCCACAGCACTGTCTGGAA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGTAATCCCAGTACTTTaGGAGGCCCAGGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTVIPVL*EAQADG
Trigger: TCCATCAGCCTGGGCCTCCCAAAGTACTGGGATTAC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTCAAAAGCTTCCAGCTaGGCATCTGCCCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTSKASS*ASAHSP
Trigger: AGGAGAATGGGCAGATGCTCAGCTGGAAGCTTTTGA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAGGTTGGGGACACATaGAGTCCTCAGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTKVGDT*SPQGVK
Trigger: CTTTACACCCTGAGGACTTCATGTGTCCCCAACCTT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAATCACTGGAACCCATaGGGTAGAGCCTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTNHWNP*GRAYSE
Trigger: CTCACTGTAGGCTCTACCTCATGGGTTCCAGTGATT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCAGACTGGGGGCATGTaGTGTCTGTGTGTCCCATTA +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNQTGGM*CLCVPL
Trigger: TAATGGGACACACAGACATCACATGCCCCCAGTCTG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTTGTCTGTTTTGCTCTaGTGGGGTCTGTGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTLSVLL*WGLCGL
Trigger: TAGCCCACACAGACCCCATCAGAGCAAAACAGACAA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTGCAACTCTGTGTTCTaGCAGTCTCTTAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSICNSVF*QSLNSD
Trigger: GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCCGGAGTCCCCAATGTaGTTTCCCTGGAGATTGATA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMPESPM*FPWRLI
Trigger: TATCAATCTCCAGGGAAACCACATTGGGGACTCCGG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCCCTGGAGATTGATATaGTGGAGCCTGTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNPWRLI*WSLWFP
Trigger: TGGAAACCACAGGCTCCAGCATATCAATCTCCAGGG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATCACATTTCAACAGTaGACGTGGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIITFQQ*TWEHLS
Trigger: AGACAAATGCTCCCACGTGCACTGTTGAAATGTGAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTCAGGCCATTTATTCTaGAGAATATCTGTCAATTTG +
Preference number: 4 (lower is better)
Translates to: IIFPSRPSSMASASMMVPSGHLF*RISVNL
Trigger: CAAATTGACAGATATTCTGCAGAATAAATGGCCTGA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCTCCGTCATCCCCGATaGCGTTCTCCTGTAAATCTA +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNLRHPR*RSPVNL
Trigger: TAGATTTACAGGAGAACGCCATCGGGGATGACGGAG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCTCAGACAGAAACAATaGAAACCAGCAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTLRQKQ*KPADRA
Trigger: TGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATCCAATGTGGTTTCCCTaGAGATTGATATGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNPMWFP*RLICWS
Trigger: GCTCCAGCATATCAATCTCCAGGGAAACCACATTGG...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTGCTTTCTCCAGTGTTTaGCTACTGCAACTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTAFSSV*LLQLCV
Trigger: AACACAGAGTTGCAGTAGCCAAACACTGGAGAAAGC...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR TCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGTGTATGATCATTATTTaGAAAGGGAGAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMCMIII*KGREGG
Trigger: TCCTCCCTCTCTCCCTTTTCAAATAATGATCATACA...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGTGTGTGTCCCATTATTaGCGATGTTCAATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QSRNLCPAKTVINTARPMCVSHY*RCSILS
Trigger: TGACAGAATTGAACATCGCCAATAATGGGACACACA...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTCAGTGTCACGTGTCTaGAAGGAAATTGTATTCATT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTSVSRV*KEIVFI
Trigger: AATGAATACAATTTCCTTCCAGACACGTGACACTGA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
3UTR CAA 72 bp CGATGTTCAATTCTGTCACTTCTGTTGAGGCTGCATTaGCCAGATTTCAGATTAAGGTACCTTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RCSILSLLLRLH*PDFRLRYLFPF
Trigger: AAAGGGAAAAAGGTACCTTAATCTGAAATCTGGCAAATGCAGCCTCAACAGAAGTGACAGAATTGAACATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTCAGGCCATTTATTCTaGAGAATATCTGTCAATTTG +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTSGHLF*RISVNL
Trigger: CAAATTGACAGATATTCTGCAGAATAAATGGCCTGA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR GCA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAACTGTCATAAATACTaGAAGACCCATGTTCAGATT +
Preference number: 4 (lower is better)
Translates to: NSDRNNANQQTEHHLESTNCHKY*KTHVQI
Trigger: AATCTGAACATGGGTCTTGCAGTATTTATGACAGTT...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CCA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATAAAAGGCAAAATCCTTaGAGAACTCTTACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NANQQTEHHLESTKTAVNKRQNP*RTLTVS
Trigger: AGAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTT...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS CCA 90 bp CGCGGTGCGCGGGACCAGTCAGCCTGGCCAGGGCCCCGCTCTCCATaGCCTCCTCCACGCTGCGGGCCAGCTCGGTGTGCTGCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: RGARDQSAWPGPRSP*PPPRCGPARCAAAH
Trigger: ATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGCCCTGGCCAGGCTGACTGGTCCCGCGCACCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 90 bp CGGTCCTGGCGGGGTGCCCGCCCCCGCGGGTGGCCTCCACCTGTGTaGAGTCGTGTTCCCTCAGCTGCAGGTCCGTCAGGCCCTCCACCA +
Preference number: 5 (lower is better)
Translates to: RSWRGARPRGWPPPV*SRVPSAAGPSGPPP
Trigger: TGGTGGAGGGCCTGACGGACCTGCAGCTGAGGGAACACGACTTCACACAGGTGGAGGCCACCCGCGGGGGCGGGCACCCCGCCAGGACCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp TGCAGGTCCGTCAGGCCCTCCACCAGCAGGAGGGAGGCCAGCCTGTaGCAGGGTCCGCCCAGCTCCGGGCCACCTCCCACCTTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CRSVRPSTSRREASL*QGPPSSGPPPTLLS
Trigger: GCTGAGCAAGGTGGGAGGTGGCCCGGAGCTGGGCGGACCCTGGCACAGGCTGGCCTCCCTCCTGCTGGTGGAGGGCCTGACGGACCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp GAGAGAGGCAGGAAGAGCCGGTCCAGGGCGACGGTCCTGGCGGGGTaGCCGCCCCCGCGGGTGGCCTCCACCTGTGTGAAGTCGTGTTCC +
Preference number: 5 (lower is better)
Translates to: ERGRKSRSRATVLAG*PPPRVASTCVKSCS
Trigger: GGAACACGACTTCACACAGGTGGAGGCCACCCGCGGGGGCGGGCACCCCGCCAGGACCGTCGCCCTGGACCGGCTCTTCCTGCCTCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp CCTGCTCGGCTGGGGAGCCCGTACCGTGGCCCTGGCCGGCCTCCCTaGCCGTCCGCACCTCTTGCTTCCTCATGGAGTCGGGGATCACCT +
Preference number: 5 (lower is better)
Translates to: PARLGSPYRGPGRPP*PSAPLASSWSRGSP
Trigger: AGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 90 bp CCAGCAGCCTCCCGGGCCTCGATGCTGCTCCAGGGACAGCAAGACTaGGGGGCCTGGGGGCGTCCATCTCCATGCTCCTGGGCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PAASRASMLLQGQQD*GAWGRPSPCSWAQP
Trigger: GGGCTGAGCCCAGGAGCATGGAGATGGACGCCCCCAGGCCCCCCAGTCTTGCTGTCCCTGGAGCAGCATCGAGGCCCGGGAGGCTGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324659.12
CDS CCA 90 bp GAGGCGTCCTGCACTCATCCAAGCCGTCCAGGATCAGGAGGGCCCTaGCTGGGACTGCCACCGCCAGGCTGGGCTCCCCGACGTGCGGGA +
Preference number: 5 (lower is better)
Translates to: EASCTHPSRPGSGGP*LGLPPPGWAPRRAG
Trigger: TCCCGCACGTCGGGGAGCCCAGCCTGGCGGTGGCAGTCCCAGCCAGGGCCCTCCTGATCCTGGACGGCTTGGATGAGTGCAGGACGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp CCCCCGCGGGTGGCCTCCACCTGTGTGAAGTCGTGTTCCCTCAGCTaGAGGTCCGTCAGGCCCTCCACCAGCAGGAGGGAGGCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PPRVASTCVKSCSLS*RSVRPSTSRREASL
Trigger: CAGGCTGGCCTCCCTCCTGCTGGTGGAGGGCCTGACGGACCTGCAGCTGAGGGAACACGACTTCACACAGGTGGAGGCCACCCGCGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp CAGTCAGCCTGGCCAGGGCCCCGCTCTCCATGGCCTCCTCCACGCTaGGGGCCAGCTCGGTGTGCTGCAGCTCATGCAGGCAGTGCAACA +
Preference number: 5 (lower is better)
Translates to: QSAWPGPRSPWPPPR*GPARCAAAHAGSAT
Trigger: TGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGCCCTGGCCAGGCTGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp CCAGCCTGTGCCAGGGTCCGCCCAGCTCCGGGCCACCTCCCACCTTaGTCAGCAGGGCCTTGCGGTGCCTCTGTATCCTTGAGTCTGCGG +
Preference number: 5 (lower is better)
Translates to: PACARVRPAPGHLPP*SAGPCGASVSLSLR
Trigger: CCGCAGACTCAAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAAGGTGGGAGGTGGCCCGGAGCTGGGCGGACCCTGGCACAGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603055.1
CDS CCA 90 bp ATGAGGGCTTTCACCTGCTCGGCTGGGGAGCCCGTACCGTGGCCCTaGCCGGCCTCCCTGCCCGTCCGCACCTCTTGCTTCCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: MRAFTCSAGEPVPWP*PASLPVRTSCFLME
Trigger: CTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 90 bp AGATCCATGAGGGCTTTCACCTGCTCGGCTGGGGAGCCCGTACCGTaGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RSMRAFTCSAGEPVP*PWPASLPVRTSCFL
Trigger: GAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCATGGATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 90 bp GGGCCAGCTCGGTGTGCTGCAGCTCATGCAGGCAGTGCAACACGTTaGTGGCCCGTGCACAGACTGCGGCATCGGGGCGCAGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GPARCAAAHAGSATR*WPVHRLRHRGAGSP
Trigger: AGGGCTGCCTGCGCCCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp CCCGTACCGTGGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTTaGTTCCTCATGGAGTCGGGGATCACCTCCAGGAGCTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: PVPWPWPASLPVRTS*FLMESGITSRSCEE
Trigger: CTCTTCACAGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324659.12
CDS GCA 90 bp CTCCCGTCCTCTGCCTGCATGGCCCGCTGGGCTGCGCTCCTGAAATaGGTGAGGAAGCCCAGCCTGGGCCAGGATACGCCGCTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: LPSSACMARWAALLK*VRKPSLGQDTPLSV
Trigger: CACTGAGAGCGGCGTATCCTGGCCCAGGCTGGGCTTCCTCACGCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp CCGGAGAGGAAGCGCAGGAACACGTCCAGCCTCCCGTCCTCTGCCTaGATGGCCCGCTGGGCTGCGCTCCTGAAATGCGTGAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PERKRRNTSSLPSSA*MARWAALLKCVRKP
Trigger: GGGCTTCCTCACGCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAGGCTGGACGTGTTCCTGCGCTTCCTCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp TCCACGCTGCGGGCCAGCTCGGTGTGCTGCAGCTCATGCAGGCAGTaGAACACGTTGATGGCCCGTGCACAGACTGCGGCATCGGGGCGC +
Preference number: 5 (lower is better)
Translates to: STLRASSVCCSSCRQ*NTLMARAQTAASGR
Trigger: GCGCCCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp GCCCCGCTCTCCATGGCCTCCTCCACGCTGCGGGCCAGCTCGGTGTaGTGCAGCTCATGCAGGCAGTGCAACACGTTGATGGCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: APLSMASSTLRASSV*CSSCRQCNTLMARA
Trigger: TGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp CCAGCCTGTGCCAGGGTCCGCCCAGCTCCGGGCCACCTCCCACCTTaGTCAGCAGGGCCTTGCGGTGCCTCTGTATCCTTGAGTCATTGC +
Preference number: 5 (lower is better)
Translates to: PACARVRPAPGHLPP*SAGPCGASVSLSHC
Trigger: GCAATGACTCAAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAAGGTGGGAGGTGGCCCGGAGCTGGGCGGACCCTGGCACAGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp TCCCGGAAGGTCAGAGGCAGCACCAGCGAGAAGTCCTTGCCGACCTaGCCATGGGCCCAGAGGCGGACGAAGTGCCTCACCAGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SRKVRGSTSEKSLPT*PWAQRRTKCLTRVV
Trigger: GACCACCCTGGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGTGCTGCCTCTGACCTTCCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp GAGGCCGGAGAGGAAGCGCAGGAACACGTCCAGCCTCCCGTCCTCTaGCTGCATGGCCCGCTGGGCTGCGCTCCTGAAATGCGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: EAGEEAQEHVQPPVL*LHGPLGCAPEMREE
Trigger: TTCCTCACGCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAGGCTGGACGTGTTCCTGCGCTTCCTCTCCGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp GGTGTGCTGCAGCTCATGCAGGCAGTGCAACACGTTGATGGCCCGTaGACAGACTGCGGCATCGGGGCGCAGGCAGCCCTGCAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: GVLQLMQAVQHVDGP*TDCGIGAQAALQEL
Trigger: GAGCTCCTGCAGGGCTGCCTGCGCCCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp CCGCTCTCCATGGCCTCCTCCACGCTGCGGGCCAGCTCGGTGTGCTaGAGCTCATGCAGGCAGTGCAACACGTTGATGGCCCGTGCACAG +
Preference number: 5 (lower is better)
Translates to: PLSMASSTLRASSVC*SSCRQCNTLMARAQ
Trigger: CTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCATGGAGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 90 bp GGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTTGCTTCCTCATaGAGTCGGGGATCACCTCCAGGAGCTGTGAAGAGAGGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: GPGRPPCPSAPLASS*SRGSPPGAVKRGPE
Trigger: TTCAGGCCCTCTCTTCACAGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324659.12
CDS GCA 90 bp CAGAAGGCTGGGACGGTGCACATCAGGTACAGGGCCCTGTCAGCCTaGACTTGGCTCAGCATCCAGCCCAGAAGGGCCTGGTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QKAGTVHIRYRALSA*TWLSIQPRRAWSSG
Trigger: CCCCGAGGACCAGGCCCTTCTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAGGGCCCTGTACCTGATGTGCACCGTCCCAGCCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp ATGGCCTCCTCCACGCTGCGGGCCAGCTCGGTGTGCTGCAGCTCATaGAGGCAGTGCAACACGTTGATGGCCCGTGCACAGACTGCGGCA +
Preference number: 5 (lower is better)
Translates to: MASSTLRASSVCCSS*RQCNTLMARAQTAA
Trigger: TGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 90 bp AAGGTCAGAGGCAGCACCAGCGAGAAGTCCTTGCCGACCTGCCCATaGGCCCAGAGGCGGACGAAGTGCCTCACCAGGGTGGTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: KVRGSTSEKSLPTCP*AQRRTKCLTRVVLP
Trigger: GGGCAAGACCACCCTGGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGTGCTGCCTCTGACCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS-3UTR CAA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGAATGTCCCCACCATCTaGCGGCCACCATGGGCCACC +
Preference number: 5 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEENVPTI*RPPWAT
Trigger: GGTGGCCCATGGTGGCCGCAAGATGGTGGGGACATT...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCCCGGCCAGGAGGGCATaGACCCTCGGAGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVPARRA*TLGDKR
Trigger: CCTCTTGTCTCCGAGGGTCAATGCCCTCCTGGCCGG...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGTGTATCCTTGAGTCATaGCTGCAGGGCCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEECILES*LQGPSG
Trigger: CCCGCTGGGGCCCTGCAGCAATGACTCAAGGATACA...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTCCGGGATCTCCTTCTTaGGGTCCGTGCAGGCCACGG +
Preference number: 5 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAPGSPS*GPCRPR
Trigger: CCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGG...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp CCTGTTCTGCTTCAAGGCATCTGCCATCCGCTGGGCTCCCATGGGCCCGATGCTGCTCGATGCGAGGGCTaGCCTTGCCCTTCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PVLLQGICHPLGSHGPDAARCEG*PCPSPA
Trigger: GGCAGGAGAAGGGCAAGGCAAGCCCTCGCATCGAGC...AGCATCGGGCCCATGGGAGCCCAGCGGATGGCAGATGCCTTGAAGCAGAACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS GCA 90 bp AGGCCACTGACGATGCCAACGTCTCCTCTCTCTGCAGGAAGCAGCTaGACGGGGCGCCCTGCAGCAGAGCGAGGTCTACACCAAACGCCT +
Preference number: 5 (lower is better)
Translates to: RPLTMPTSPLSAGSS*TGRPAAERGLHQTP
Trigger: AGGCGTTTGGTGTAGACCTCGCTCTGCTGCAGGGCGCCCCGTGCAGCTGCTTCCTGCAGAGAGAGGAGACGTTGGCATCGTCAGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCAGGTGCCTCTGTATCCTaGAGTCATTGCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPGASVS*SHCCRA
Trigger: GGCCCTGCAGCAATGACTCAAGGATACAGAGGCACC...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGATGCGAGGGCTTGCCTaGCCCTTCTCCTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: QGLSHGPGTIIPNGVALEMRGLA*PFSCPS
Trigger: GGAGGGGCAGGAGAAGGGCAAGGCAAGCCCTCGCAT...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGGCGTCACTGATGGAATaGCTCTGCAGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEASLME*LCRSRL
Trigger: GAGCCTGGACCTGCAGAGCAATTCCATCAGTGACGC...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGATGCTCCTCACGGGCTaGAGGTGGCAGCTCATCTCA +
Preference number: 5 (lower is better)
Translates to: VRVRFSLTATAMARAPWSMLLTG*RWQLIS
Trigger: TGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCAT...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS GCA 90 bp GCCAACGTCTCCTCTCTCTGCAGGAAGCAGCTGCACGGGGCGCCCTaGAGCAGAGCGAGGTCTACACCAAACGCCTTCATGTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: ANVSSLCRKQLHGAP*SRARSTPNAFMSCS
Trigger: CGAGCAAGACATGAAGGCGTTTGGTGTAGACCTCGCTCTGCTGCAGGGCGCCCCGTGCAGCTGCTTCCTGCAGAGAGAGGAGACGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 90 bp CTGGAGGCTCAGGGAGGTCAGGGTGCGGTTGATCTTCAAAGCGTCTaGCAGCGCCTTGGCCCCTTGTGGTCCAATGGAGTTACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: LEAQGGQGAVDLQSV*QRLGPLWSNGVTAE
Trigger: CTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCTGAGCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000618137.1
CDS CCA 90 bp GGTCCACCGGGATCTCCTTCTTTGGGTCCGTGCAGGCCACGGTGTTaGAGAAGTCCAGAGGCGTCCTGCACTCATCCAAGCCGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GPPGSPSLGPCRPRC*RSPEASCTHPSRPG
Trigger: TCCTGGACGGCTTGGATGAGTGCAGGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 90 bp AAGCTGGTGAGGCTCCTGTTGAGCTGTAGTGCTTGTCCCAGGGCCTaGGCAGCGCCGGCCTGGATGAAGTTCCACTGCAGGTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: KLVRLLLSCSACPRA*AAPAWMKFHCRSRF
Trigger: GAACCTGGACCTGCAGTGGAACTTCATCCAGGCCGGCGCTGCCCAGGCCCTGGGACAAGCACTACAGCTCAACAGGAGCCTCACCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618137.1
CDS-3UTR CAA 90 bp CAAGGCCTCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGTGCCCTGGAGGCATGTaGGCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: QGLSHGPGTIIPNGVALECPGGM*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAACATGCCTCCAGGGCA...CTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGAGGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS GCA 90 bp GATCTCCGTCATCCGGTCCACCAGGCCCCCTGGGATCTGGCCAGATaGACTGGGACGGGAGGTGATCCAGATGGAAACTTCCGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: DLRHPVHQAPWDLAR*TGTGGDPDGNFRKE
Trigger: CTCTTTCCGGAAGTTTCCATCTGGATCACCTCCCGTCCCAGTGCATCTGGCCAGATCCCAGGGGGCCTGGTGGACCGGATGACGGAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 90 bp TGCGGGAAGACCGAGCAGATGAGTCGGTCGGCACACAGCTTCTCGTaGGTGTTGAGATCCCGGAAGGTCAGAGGCAGCACCAGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: CGKTEQMSRSAHSFS*VLRSRKVRGSTSEK
Trigger: CTTCTCGCTGGTGCTGCCTCTGACCTTCCGGGATCTCAACACCCACGAGAAGCTGTGTGCCGACCGACTCATCTGCTCGGTCTTCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 90 bp GCCCTGTCAGCCTGCACTTGGCTCAGCATCCAGCCCAGAAGGGCCTaGTCCTCGGGGAACATCTGCTCCAAACACACCTTGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALSACTWLSIQPRRA*SSGNICSKHTLISS
Trigger: GGAGGAGATCAAGGTGTGTTTGGAGCAGATGTTCCCCGAGGACCAGGCCCTTCTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCTCACCAGGGTGGTCTaGCCCATGCCGGCCACCCCG +
Preference number: 5 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPILTRVV*PMPATP
Trigger: CGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGAG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCTCCCTGCAGAGCCCGGCTCTCGTGCTGAGCAAGCAGCGTTCCCAGCTCCCATTACCTTCAGAGCATTaGCCAGGGCTTTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SSLQSPALVLSKQRSQLPLPSEH*PGLWLQ
Trigger: CTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAA...TGGGAGCTGGGAACGCTGCTTGCTCAGCACGAGAGCCGGGCTCTGCAGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS TCA 90 bp TCCAGCTGCGTGGTGGTAGATGCCCTGGGAATCCCTGTGCCAGCCTaGGTTCTCAGGACCAGGGATCAGGGCACTTACCACGCCAACCAA +
Preference number: 5 (lower is better)
Translates to: SSCVVVDALGIPVPA*VLRTRDQGTYHANQ
Trigger: TTGGTTGGCGTGGTAAGTGCCCTGATCCCTGGTCCTGAGAACTCAGGCTGGCACAGGGATTCCCAGGGCATCTACCACCACGCAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 90 bp TTTCACCCTCAGGGAGGTCAGGGTGCGGTTGATCTTCAAAGCGTCTaGCAGCGCCTTGGCCCCTTGTGGTCCAATGGAGTTACCGCGGAG +
Preference number: 5 (lower is better)
Translates to: FHPQGGQGAVDLQSV*QRLGPLWSNGVTAE
Trigger: CTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCTGAGGGTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTGGAGGAGGAGAGGGAGGACTCTTaGTTTTCTCCACCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: AVFSHCHCDGPGTLVVEEEREDS*FSPPVW
Trigger: CCAAACTGGTGGAGAAAACAAAGAGTCCTCCCTCTC...CTCCTCCACGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS GCA 90 bp TGGCTCAGCATCCAGCCCAGAAGGGCCTGGTCCTCGGGGAACATCTaGTCCAAACACACCTTGATCTCCTCCTCGTTAAAGCCCCGGATC +
Preference number: 5 (lower is better)
Translates to: WLSIQPRRAWSSGNI*SKHTLISSSLKPRI
Trigger: GATCCGGGGCTTTAACGAGGAGGAGATCAAGGTGTGTTTGGAGCAGATGTTCCCCGAGGACCAGGCCCTTCTGGGCTGGATGCTGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 90 bp ACGGATGATGTTGGTGATCAGGTGGTCCACCGGGATCTCCTTCTTTaGGTCCGTGCAGGCCACGGTGTTGGAGAAGTCCAGAGGCGTCCT +
Preference number: 5 (lower is better)
Translates to: TDDVGDQVVHRDLLL*VRAGHGVGEVQRRP
Trigger: AGGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 90 bp GGTGCGGTTGATCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCTTGTaGTCCAATGGAGTTACCGCGGAGGTCCAGAGAGGTCAGACTTCT +
Preference number: 5 (lower is better)
Translates to: GAVDLQSVCQRLGPL*SNGVTAEVQRGQTS
Trigger: AGAAGTCTGACCTCTCTGGACCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGCCCGTCCGCACCTCTaGCTTCCTCATGGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARARPHL*LPHGVG
Trigger: CCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCACCAGCGAGAAGTCCTaGCCGACCTGCCCATGGGCC +
Preference number: 5 (lower is better)
Translates to: SLQHKQLQELVPHRGSACTSEKS*PTCPWA
Trigger: GGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGT...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCACCTGTCAGCCTGCACTaGGCTCAGCATCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPPVSLH*AQHPAQ
Trigger: CTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAGG...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGATGCGAGGGCTTGCCTaGCCCTTCTCCTGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARMRGLA*PFSCPS
Trigger: GGAGGGGCAGGAGAAGGGCAAGGCAAGCCCTCGCAT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGCTCGATGCGAGGGCTaGCCTTGCCCTTCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARARCEG*PCPSPA
Trigger: GGCAGGAGAAGGGCAAGGCAAGCCCTCGCATCGAGC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTCCGGCCAGGAGGGCATaGACCCTCGGAGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIPARRA*TLGDKR
Trigger: CCTCTTGTCTCCGAGGGTCAATGCCCTCCTGGCCGG...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGAGGCAGTGCAACACGTaGATGGCCCGTGCACAGACT +
Preference number: 5 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQRQCNT*MARAQT
Trigger: AGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCT...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGATGGAGAGGGTCCGGTaGGAGGCCAAGGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARMERVR*EAKASA
Trigger: GGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCAT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GTGAGGGTGCGGTTTTCTCTCACTGCCACTGCGATGGCCCGGGCACCCTGGTCGTCTCAGGTGCCAGAATaGGGGACTCCTTTAATTGGA +
Preference number: 5 (lower is better)
Translates to: VRVRFSLTATAMARAPWSSQVPE*GTPLIG
Trigger: TCCAATTAAAGGAGTCCCCAATTCTGGCACCTGAGA...CGACCAGGGTGCCCGGGCCATCGCAGTGGCAGTGAGAGAAAACCGCACCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS CCA 90 bp GAAACTTCCGGAAAGAGGTTGCCACGGATGATGTTGGTGATCAGGTaGTCCACCGGGATCTCCTTCTTTGGGTCCGTGCAGGCCACGGTG +
Preference number: 5 (lower is better)
Translates to: ETSGKRLPRMMLVIR*STGISFFGSVQATV
Trigger: CACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTTCCGGAAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACCTCACCAGGGTGGTCTaGCCCATGCCGGCCACCCCG +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDLTRVV*PMPATP
Trigger: CGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGAG...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCAATGTCCCCACCATCTaGCGGCCACCATGGGCCACC +
Preference number: 5 (lower is better)
Translates to: SLQHKQLQELVPHRGSACNVPTI*RPPWAT
Trigger: GGTGGCCCATGGTGGCCGCAAGATGGTGGGGACATT...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGGGTCCTGGAACTGGTaGGTGTCCAGCCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GHSSGFGSLVRNDITARCGSWNW*VSSLSF
Trigger: GAAGCTCAGGCTGGACACCAACCAGTTCCAGGACCC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGCAGTGAGGGCTGTGTaGACCTTCAGTGCACGGGCC +
Preference number: 5 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIAVRAV*TFSARA
Trigger: GGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS TCA 90 bp CTTCCTCATGGAGTCGGGGATCACCTCCAGGAGCAGATAGGTGACTaGGGGCAGGCTGAGTCACCTCTCTGCGCCTTGGTGTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: LPHGVGDHLQEQIGD*GQAESPLCALVSSF
Trigger: AAATGAAGACACCAAGGCGCAGAGAGGTGACTCAGCCTGCCCTCAGTCACCTATCTGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS-3UTR CAA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTTGCTCAGCAGGGCCTaGCGGTGCCTCTGTATCCTT +
Preference number: 5 (lower is better)
Translates to: GHSSGFGSLVRNDITARCLLSRA*RCLCIL
Trigger: AAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGACTTCCGGAAAGAGGTaGCCACGGATGATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQTSGKR*PRMMLV
Trigger: CACCAACATCATCCGTGGCAACCTCTTTCCGGAAGT...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAAGGCAGTGCAACACGTaGATGGCCCGTGCACAGACT +
Preference number: 5 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPRQCNT*MARAQT
Trigger: AGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGGGTCCTGGAACTGGTaGGTGTCCAGCCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARGSWNW*VSSLSF
Trigger: GAAGCTCAGGCTGGACACCAACCAGTTCCAGGACCC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCGAGGTCAGGGTGCGGTaGATCTTCAAAGCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PILLIRPPGSHFNSARGSEVRVR*IFKASA
Trigger: GGCAGACGCTTTGAAGATCAACCGCACCCTGACCTC...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAGCGTCACTGATGGAATaGCTCTGCAGGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPASLME*LCRSRL
Trigger: GAGCCTGGACCTGCAGAGCAATTCCATCAGTGACGC...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGTTACCTTCAGAGCATTaGCCAGGGCTTTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQLPSEH*PGLWLQ
Trigger: CTGGAGCCAAAGCCCTGGCAAATGCTCTGAAGGTAA...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAATGCTCCTCACGGGCTaGAGGTGGCAGCTCATCTCA +
Preference number: 5 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPMLLTG*RWQLIS
Trigger: TGAGATGAGCTGCCACCTCAAGCCCGTGAGGAGCAT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp AGCAGTGAGGGCTGTGTTGACCTTCAGTGCACGGGCCACCGCACACGCTCCGTCATTCTGTCACTTCTGTaGAGGCTGCATTTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: SSEGCVDLQCTGHRTRSVILSLL*RLHLPD
Trigger: ATCTGGCAAATGCAGCCTCAACAGAAGTGACAGAAT...GACGGAGCGTGTGCGGTGGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGCCCGTCCGCACCTCTaGCTTCCTCATGGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDARPHL*LPHGVG
Trigger: CCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACACCAGCGAGAAGTCCTaGCCGACCTGCCCATGGGCC +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDTSEKS*PTCPWA
Trigger: GGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGAGGTCAGACTTCTGTaGACCAAGAGGGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: GHSSGFGSLVRNDITARCEVRLL*TKRDLA
Trigger: GGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCTC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCAGCGCCTTGGCCCCTaGTGGTCCAATGGAGTTACC +
Preference number: 5 (lower is better)
Translates to: IIFPSRPSSMASASMMVPQRLGP*WSNGVT
Trigger: GGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCAGCGCCTTGGCCCCTaGTGGTCCAATGGAGTTACC +
Preference number: 5 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACQRLGP*WSNGVT
Trigger: GGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTG...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTGAGGTCAGGGTGCGGTaGATCTTCAAAGCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIEVRVR*IFKASA
Trigger: GGCAGACGCTTTGAAGATCAACCGCACCCTGACCTC...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTTCATCCCTAACGGTGTaGCCCTGGAGGCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: IIFPSRPSSMASASMMVPSSLTV*PWRLRE
Trigger: CTCCCTGAGCCTCCAGGGCAACACCGTTAGGGATGA...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359128.10
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCTGGTGAGGCTCCTGTaGAGCTGTAGTGCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARLVRLL*SCSACP
Trigger: GGGACAAGCACTACAGCTCAACAGGAGCCTCACCAG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTCATCCCTAACGGTGTaGCCCTGGAGGCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARSSLTV*PWRHVG
Trigger: GCCAACATGCCTCCAGGGCAACACCGTTAGGGATGA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTTGCCACGGATGATGTaGGTGATCAGGTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARLPRMM*VIRWST
Trigger: GGTGGACCACCTGATCACCAACATCATCCGTGGCAA...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCTTGCCACGGATGATGTaGGTGATCAGGTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: SLQHKQLQELVPHRGSACLPRMM*VIRWST
Trigger: GGTGGACCACCTGATCACCAACATCATCCGTGGCAA...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCGAGGTCAGACTTCTGTaGACCAAGAGGGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLQHKQLQELVPHRGSACEVRLL*TKRDLA
Trigger: GGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCTC...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAGCGTCTGCCAGCGCCTaGGCCCCTTGTGGTCCAATG +
Preference number: 5 (lower is better)
Translates to: THYINIIAVRPRGLSGARASASA*APCGPM
Trigger: CATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGC...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGCGTCTGCCAGCGCCTaGGCCCCTTGTGGTCCAATG +
Preference number: 5 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIASASA*APCGPM
Trigger: CATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTATGGAGAGGGTCCGGTaGGAGGCCAAGGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIMERVR*EAKASA
Trigger: GGCTGAGGCCTTGGCCTCCAACCGGACCCTCTCCAT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCGCCTGAAGCACCAATaGAGGCCACCTGGAGATAGA +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARRLKHQ*RPPGDR
Trigger: TCTATCTCCAGGTGGCCTCAATTGGTGCTTCAGGCG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCTGGTTTCCCTGGAGATaGATATGCTGGAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GHSSGFGSLVRNDITARCWFPWR*ICWSLW
Trigger: CCACAGGCTCCAGCATATCAATCTCCAGGGAAACCA...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACCTGTCAGCCTGCACTaGGCTCAGCATCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: THYINIIAVRPRGLSGARPVSLH*AQHPAQ
Trigger: CTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAGG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGGATCTGGCCAGAGCTTaGGCCCCTTTGTTACTGATC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARDLARA*APLLLI
Trigger: GATCAGTAACAAAGGGGCCAAAGCTCTGGCCAGATC...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAGCAGTGAGGGCTGTGTaGACCTTCAGTGCACGGGCC +
Preference number: 5 (lower is better)
Translates to: THYINIIAVRPRGLSGARAVRAV*TFSARA
Trigger: GGCCCGTGCACTGAAGGTCAACACAGCCCTCACTGC...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCATCTTCCCGAGTAGGCCTTCATCCATGGCCTCAGCATCCATGATGGTTCCTCGCCTGAAGCACCAATaGAGGCCACCTGGAGATAGA +
Preference number: 5 (lower is better)
Translates to: IIFPSRPSSMASASMMVPRLKHQ*RPPGDR
Trigger: TCTATCTCCAGGTGGCCTCAATTGGTGCTTCAGGCG...AGGAACCATCATGGATGCTGAGGCCATGGATGAAGGCCTACTCGGGAAGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGCATTTGCCAGGGCTTaGGCTCCAGCCACCCCAATG +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDAFARA*APATPM
Trigger: CATTGGGGTGGCTGGAGCCAAAGCCCTGGCAAATGC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTCAGCTTTCAGGCCTTaGGCCCCTAGTCCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDSAFRP*APSPLG
Trigger: CCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTGA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAAAACAGCTGCAGGAATaGGTGCCACATAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPKQLQE*VPHRGS
Trigger: TGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCGAGAGGGAGGACTCTTaGTTTTCTCCACCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GHSSGFGSLVRNDITARCEREDS*FSPPVW
Trigger: CCAAACTGGTGGAGAAAACAAAGAGTCCTCCCTCTC...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS TCA 90 bp CACCAAACGCCTTCATGTCTTGCTCGTAAAACACGTATTTCTTCTTaGGCAGCCCATGGAAGGCCAGACGGCCCAATGTCCCCACCATCT +
Preference number: 5 (lower is better)
Translates to: HQTPSCLARKTRISS*AAHGRPDGPMSPPS
Trigger: AGATGGTGGGGACATTGGGCCGTCTGGCCTTCCATGGGCTGCTCAAGAAGAAATACGTGTTTTACGAGCAAGACATGAAGGCGTTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGATGTATCCTTGAGTCATaGCTGCAGGGCCCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: THYINIIAVRPRGLSGARCILES*LQGPSG
Trigger: CCCGCTGGGGCCCTGCAGCAATGACTCAAGGATACA...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGCCGGGATCTCCTTCTTaGGGTCCGTGCAGGCCACGG +
Preference number: 5 (lower is better)
Translates to: QSRNLCPAKTVINTARPMPGSPS*GPCRPR
Trigger: CCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGG...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGAGAGCTTTGGCCCCTTaGTTACTGATCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARRALAP*LLIWFS
Trigger: GGAGAACCAGATCAGTAACAAAGGGGCCAAAGCTCT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTTCAGCTTTCAGGCCTTaGGCCCCTAGTCCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: IRLGACDVCVSHYWRCSISAFRP*APSPLG
Trigger: CCCCAAGGGACTAGGGGCCAAAGGCCTGAAAGCTGA...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCCCAGAAGTCGGCCTTTCTGTTCAAAAGCTTCCAGCTGAGCATCTGCCCATTAAACAGCTGCAGGAATaGGTGCCACATAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: PPEVGLSVQKLPAEHLPIKQLQE*VPHRGS
Trigger: TGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTT...AATGGGCAGATGCTCAGCTGGAAGCTTTTGAACAGAAAGGCCGACTTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTCTCCATGGAAGCTGTGGCCAAGCTTTCTCCAGTGTTaGGCTACTGCAACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: ELVPHRGSACLSPWKLWPSFLQC*ATATLC
Trigger: ACACAGAGTTGCAGTAGCCAAACACTGGAGAAAGCT...TGGCCACAGCTTCCATGGAGACAGGCAAGCTGAGCCTCTATGTGGCACCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACAGCTTCTCGTGGGTGTaGAGATCCCGGAAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDSFSWV*RSRKVR
Trigger: TCTGACCTTCCGGGATCTCAACACCCACGAGAAGCT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATGGACCTGGCACCATCATCCCTAACGGTGTTGCCCTGGAGGCATGTTGGCCAGAAACGCCTTCATGTCTaGCTCGTAAAACACGTATTT +
Preference number: 5 (lower is better)
Translates to: MDLAPSSLTVLPWRHVGQKRLHV*LVKHVF
Trigger: AAATACGTGTTTTACGAGCAAGACATGAAGGCGTTT...CTGGCCAACATGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp CCCATTCTCCTGATCCGTCCACCAGGATCACATTTCAACAGTGCACGTGGGAGCACACTGAATGTGCTATaGATAACCAGTGTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: PILLIRPPGSHFNSARGSTLNVL*ITSVPD
Trigger: GTCTGGCACACTGGTTATCAATAGCACATTCAGTGT...GCTCCCACGTGCACTGTTGAAATGTGATCCTGGTGGACGGATCAGGAGAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGAAGCTTCTCGTGGGTGTaGAGATCCCGGAAGGTCAGA +
Preference number: 5 (lower is better)
Translates to: THYINIIAVRPRGLSGARSFSWV*RSRKVR
Trigger: TCTGACCTTCCGGGATCTCAACACCCACGAGAAGCT...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACTGGTTTCCCTGGAGATaGATATGCTGGAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDWFPWR*ICWSLW
Trigger: CCACAGGCTCCAGCATATCAATCTCCAGGGAAACCA...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCCTCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTTGAGGCTGCATTaGCCAGATTTCAGATTAAGG +
Preference number: 5 (lower is better)
Translates to: SLQHKQLQELVPHRGSACLLRLH*PDFRLR
Trigger: CCTTAATCTGAAATCTGGCAAATGCAGCCTCAACAG...GCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGCTGTTGAGGCTGCATTaGCCAGATTTCAGATTAAGG +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARLLRLH*PDFRLR
Trigger: CCTTAATCTGAAATCTGGCAAATGCAGCCTCAACAG...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTTGCTCAGCAGGGCCTaGCGGTGCCTCTGTATCCTT +
Preference number: 5 (lower is better)
Translates to: NSDRNNANQQTEHHLESTLLSRA*RCLCIL
Trigger: AAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTACTTCCGGAAAGAGGTaGCCACGGATGATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: IRLGACDVCVSHYWRCSITSGKR*PRMMLV
Trigger: CACCAACATCATCCGTGGCAACCTCTTTCCGGAAGT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp GGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGTGCAAACGCCTTCATGTCTaGCTCGTAAAACACGTATTT +
Preference number: 5 (lower is better)
Translates to: GHSSGFGSLVRNDITARCKRLHV*LVKHVF
Trigger: AAATACGTGTTTTACGAGCAAGACATGAAGGCGTTT...GCACCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACAGAGCTTTGGCCCCTTaGTTACTGATCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDRALAP*LLIWFS
Trigger: GGAGAACCAGATCAGTAACAAAGGGGCCAAAGCTCT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTAACACGTATTTCTTCTaGAGCAGCCCATGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: IRLGACDVCVSHYWRCSINTYFF*SSPWKA
Trigger: GGCCTTCCATGGGCTGCTCAAGAAGAAATACGTGTT...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ACACACTACATAAATATCATAGCTGTTAGACCCAGGGGACTCTCAGGTGCCAGACCCCAGAGAATTCTCTaGAAGATTGAGTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: THYINIIAVRPRGLSGARPQRIL*KIESPE
Trigger: CTCCGGAGACTCAATCTTCAAGAGAATTCTCTGGGG...TCTGGCACCTGAGAGTCCCCTGGGTCTAACAGCTATGATATTTATGTAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGAAAAAGGCAAAATCCTaGGAGAACTCTTACTGTCTC +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARKKAKS*ENSYCL
Trigger: GAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTTT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACAGCTTTCTCCAGTGTTaGGCTACTGCAACTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDSFLQC*ATATLC
Trigger: ACACAGAGTTGCAGTAGCCAAACACTGGAGAAAGCT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACGTTTTCTCCACCAGTTaGGCTCCTGAGGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDVFSTS*APEVSS
Trigger: TGAAGAAACCTCAGGAGCCAAACTGGTGGAGAAAAC...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCCAACACAAACAGCTGCAGGAATTGGTGCCACATAGAGGCTCAGCTTGCCTGTAAAAAGGCAAAATCCTaGGAGAACTCTTACTGTCTC +
Preference number: 5 (lower is better)
Translates to: SNTNSCRNWCHIEAQLACKKAKS*ENSYCL
Trigger: GAGACAGTAAGAGTTCTCCAAGGATTTTGCCTTTTT...ACAGGCAAGCTGAGCCTCTATGTGGCACCAATTCCTGCAGCTGTTTGTGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TGTGGCCACAGCAGTGGCTTTGGAAGCCTAGTAAGGAATGACATCACTGCCAGGATGACATTGATGTTTTaGATGAGGTCAGGCCATTTA +
Preference number: 5 (lower is better)
Translates to: CGHSSGFGSLVRNDITARMTLMF*MRSGHL
Trigger: TAAATGGCCTGACCTCATCAAAAACATCAATGTCAT...CCTGGCAGTGATGTCATTCCTTACTAGGCTTCCAAAGCCACTGCTGTGGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp ATCAGACTGGGGGCATGTGATGTCTGTGTGTCCCATTATTGGCGATGTTCAATTGTTTTCTCCACCAGTTaGGCTCCTGAGGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: IRLGACDVCVSHYWRCSIVFSTS*APEVSS
Trigger: TGAAGAAACCTCAGGAGCCAAACTGGTGGAGAAAAC...AATTGAACATCGCCAATAATGGGACACACAGACATCACATGCCCCCAGTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGGGCTCAGCCTTCCGTaGTCCACAGTTCTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: NANQQTEHHLESTKTAVNGLSLP*STVLGE
Trigger: TTCTCCTAGAACTGTGGACAACGGAAGGCTGAGCCC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS-3UTR CAA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGAACACGTATTTCTTCTaGAGCAGCCCATGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QSRNLCPAKTVINTARPMNTYFF*SSPWKA
Trigger: GGCCTTCCATGGGCTGCTCAAGAAGAAATACGTGTT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp AATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTAAAACAGCTGTCAATGATCTGGCCAGAGCTTaGGCCCCTTTGTTACTGATC +
Preference number: 5 (lower is better)
Translates to: NANQQTEHHLESTKTAVNDLARA*APLLLI
Trigger: GATCAGTAACAAAGGGGCCAAAGCTCTGGCCAGATC...ATTGACAGCTGTTTTAGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTCCCCAGAGAATTCTCTaGAAGATTGAGTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: NSDRNNANQQTEHHLESTPQRIL*KIESPE
Trigger: CTCCGGAGACTCAATCTTCAAGAGAATTCTCTGGGG...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp AACTCAGACAGAAACAATGCAAACCAGCAGACAGAGCATCACCTTGAAAGTACTTCTCAGGTGCCAGAATaGGGGACTCCTTTAATTGGA +
Preference number: 5 (lower is better)
Translates to: NSDRNNANQQTEHHLESTSQVPE*GTPLIG
Trigger: TCCAATTAAAGGAGTCCCCAATTCTGGCACCTGAGA...AGTACTTTCAAGGTGATGCTCTGTCTGCTGGTTTGCATTGTTTCTGTCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp CAATCTAGAAATCTCTGCCCCGCAAAAACTGTCATAAATACTGCAAGACCCATGACACTGAATGTGCTATaGATAACCAGTGTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: QSRNLCPAKTVINTARPMTLNVL*ITSVPD
Trigger: GTCTGGCACACTGGTTATCAATAGCACATTCAGTGT...CATGGGTCTTGCAGTATTTATGACAGTTTTTGCGGGGCAGAGATTTCTAGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS-3UTR CAA 90 bp TCTCCAGTGTTTGGCTACTGCAACTCTGTGTTCTGCCAGTCTCTTAACTCAGACATGACATTGATGTTTTaGATGAGGTCAGGCCATTTA +
Preference number: 5 (lower is better)
Translates to: SPVFGYCNSVFCQSLNSDMTLMF*MRSGHL
Trigger: TAAATGGCCTGACCTCATCAAAAACATCAATGTCAT...GTCTGAGTTAAGAGACTGGCAGAACACAGAGTTGCAGTAGCCAAACACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp AGAGAGGCAGGAAGAGCCGGTCCAGGGCGACGGTCCTaGCGGGGTGCCCGCCCCCGCGGGTGGCCTCCACCT +
Preference number: 6 (lower is better)
Translates to: REAGRAGPGRRS*RGARPRGWPPP
Trigger: AGGTGGAGGCCACCCGCGGGGGCGGGCACCCCGCCAGGACCGTCGCCCTGGACCGGCTCTTCCTGCCTCTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 72 bp AGGCCAGGGCAGCGCGGTGCGCGGGACCAGTCAGCCTaGCCAGGGCCCCGCTCTCCATGGCCTCCTCCACGC +
Preference number: 6 (lower is better)
Translates to: RPGQRGARDQSA*PGPRSPWPPPR
Trigger: GCGTGGAGGAGGCCATGGAGAGCGGGGCCCTGGCCAGGCTGACTGGTCCCGCGCACCGCGCTGCCCTGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp AGGAAGAGCCGGTCCAGGGCGACGGTCCTGGCGGGGTaGCCGCCCCCGCGGGTGGCCTCCACCTGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: RKSRSRATVLAG*PPPRVASTCVK
Trigger: CTTCACACAGGTGGAGGCCACCCGCGGGGGCGGGCACCCCGCCAGGACCGTCGCCCTGGACCGGCTCTTCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 72 bp AGGGCTTTCACCTGCTCGGCTGGGGAGCCCGTACCGTaGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: RAFTCSAGEPVP*PWPASLPVRTS
Trigger: AGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp CGGGACCAGTCAGCCTGGCCAGGGCCCCGCTCTCCATaGCCTCCTCCACGCTGCGGGCCAGCTCGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: RDQSAWPGPRSP*PPPRCGPARCA
Trigger: AGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCATGGAGAGCGGGGCCCTGGCCAGGCTGACTGGTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 72 bp CGGGGTGCCCGCCCCCGCGGGTGGCCTCCACCTGTGTaGAGTCGTGTTCCCTCAGCTGCAGGTCCGTCAGGC +
Preference number: 6 (lower is better)
Translates to: RGARPRGWPPPV*SRVPSAAGPSG
Trigger: GCCTGACGGACCTGCAGCTGAGGGAACACGACTTCACACAGGTGGAGGCCACCCGCGGGGGCGGGCACCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp CTGGGGAGCCCGTACCGTGGCCCTGGCCGGCCTCCCTaGCCGTCCGCACCTCTTGCTTCCTCATGGAGTCGG +
Preference number: 6 (lower is better)
Translates to: LGSPYRGPGRPP*PSAPLASSWSR
Trigger: CCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGCTCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp TTCACCTGCTCGGCTGGGGAGCCCGTACCGTGGCCCTaGCCGGCCTCCCTGCCCGTCCGCACCTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: FTCSAGEPVPWP*PASLPVRTSCF
Trigger: GAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp GCTGGGACTGCCACCGCCAGGCTGGGCTCCCCGACGTaGGGGAAGACCGAGCAGATGAGTCGGTCGGCACAC +
Preference number: 6 (lower is better)
Translates to: AGTATARLGSPT*GKTEQMSRSAH
Trigger: GTGTGCCGACCGACTCATCTGCTCGGTCTTCCCGCACGTCGGGGAGCCCAGCCTGGCGGTGGCAGTCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp CTCAGCCACCTGGGTCCGGTAGGCCTGGTGCTCGCCTaGGGCCAGCAGGGAGCCGGCCAGGAGGGCATTGAC +
Preference number: 6 (lower is better)
Translates to: LSHLGPVGLVLA*GQQGAGQEGID
Trigger: GTCAATGCCCTCCTGGCCGGCTCCCTGCTGGCCCAAGGCGAGCACCAGGCCTACCGGACCCAGGTGGCTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp CTGCAGGAGCTCAGCCACCTGGGTCCGGTAGGCCTGGTGCTCGCCTaGGGCCAGCAGGGAGCCGGCCAGGAGGGCATTGACCCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: LQELSHLGPVGLVLA*GQQGAGQEGIDPRR
Trigger: TCTCCGAGGGTCAATGCCCTCCTGGCCGGCTCCCTGCTGGCCCAAGGCGAGCACCAGGCCTACCGGACCCAGGTGGCTGAGCTCCTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp TGCCCATGGGCCCAGAGGCGGACGAAGTGCCTCACCAGGGTGGTCTaGCCCATGCCGGCCACCCCGATAGTGATGGAGACCCGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: CPWAQRRTKCLTRVV*PMPATPIVMETRGG
Trigger: CCCACCCCGGGTCTCCATCACTATCGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp CGGGCCAGCTCGGTGTGCTGCAGCTCATGCAGGCAGTGCAACACGTaGATGGCCCGTGCACAGACTGCGGCATCGGGGCGCAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RASSVCCSSCRQCNT*MARAQTAASGRRQP
Trigger: GGGCTGCCTGCGCCCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 72 bp CGCCTTGGGCCAGCAGGGAGCCGGCCAGGAGGGCATTaGCCCTCGGAGACAAGAGGCCGGAGAGGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: RLGPAGSRPGGH*PSETRGRRGSA
Trigger: TGCGCTTCCTCTCCGGCCTCTTGTCTCCGAGGGTCAATGCCCTCCTGGCCGGCTCCCTGCTGGCCCAAGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp TGGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTTaGTTCCTCATGGAGTCGGGGATCACCTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: WPWPASLPVRTS*FLMESGITSRS
Trigger: GCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp CCCTTCCCAGCCAGCAGATCCATGAGGGCTTTCACCTaGTCGGCTGGGGAGCCCGTACCGTGGCCCTGGCCG +
Preference number: 6 (lower is better)
Translates to: PFPASRSMRAFT*SAGEPVPWPWP
Trigger: CGGCCAGGGCCACGGTACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCATGGATCTGCTGGCTGGGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp GCCAGGGTCCGCCCAGCTCCGGGCCACCTCCCACCTTaGTCAGCAGGGCCTTGCGGTGCCTCTGTATCCTTG +
Preference number: 6 (lower is better)
Translates to: ARVRPAPGHLPP*SAGPCGASVSL
Trigger: CAAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAAGGTGGGAGGTGGCCCGGAGCTGGGCGGACCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp TTGCCGACCTGCCCATGGGCCCAGAGGCGGACGAAGTaGCTCACCAGGGTGGTCTTGCCCATGCCGGCCACC +
Preference number: 6 (lower is better)
Translates to: LPTCPWAQRRTK*LTRVVLPMPAT
Trigger: GGTGGCCGGCATGGGCAAGACCACCCTGGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp GTGGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTaGCTTCCTCATGGAGTCGGGGATCACCTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: VALAGLPARPHL*LPHGVGDHLQE
Trigger: CTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp GCCCGTACCGTGGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTaGCTTCCTCATGGAGTCGGGGATCACCTCCAGGAGCAGATAGGT +
Preference number: 6 (lower is better)
Translates to: ARTVALAGLPARPHL*LPHGVGDHLQEQIG
Trigger: ACCTATCTGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGGTACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp GGGGAGGTCGTGGCCCTGGCCGGCCTCCCTGCCCGTCCGCACCTCTaGCTTCCTCATGGAGTCGGGGATCACCTCCAGGAGCAGATAGGT +
Preference number: 6 (lower is better)
Translates to: GEVVALAGLPARPHL*LPHGVGDHLQEQIG
Trigger: ACCTATCTGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCGGCCAGGGCCACGACCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603055.1
CDS GCA 72 bp CCACCATCTTGCGGCCACCATGGGCCACCTGCTCGATaGGAGGGCTTGCCTTGCCCTTCTCCTGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PPSCGHHGPPAR*EGLPCPSPAPP
Trigger: GGGAGGGGCAGGAGAAGGGCAAGGCAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGATGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp GGCAGCACCAGCGAGAAGTCCTTGCCGACCTGCCCATaGGCCCAGAGGCGGACGAAGTGCCTCACCAGGGTG +
Preference number: 6 (lower is better)
Translates to: GSTSEKSLPTCP*AQRRTKCLTRV
Trigger: CACCCTGGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGTGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS TCA 72 bp TCCTGCTGCGCCACAGGTGGCCTAGCGCCATCCCCGTaGGCCTGCAGAAGGCTGGGACGGTGCACATCAGGT +
Preference number: 6 (lower is better)
Translates to: SCCATGGLAPSP*ACRRLGRCTSG
Trigger: ACCTGATGTGCACCGTCCCAGCCTTCTGCAGGCTCACGGGGATGGCGCTAGGCCACCTGTGGCGCAGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp GTCAGAGGCAGCACCAGCGAGAAGTCCTTGCCGACCTaGCCATGGGCCCAGAGGCGGACGAAGTGCCTCACC +
Preference number: 6 (lower is better)
Translates to: VRGSTSEKSLPT*PWAQRRTKCLT
Trigger: GGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGTGCTGCCTCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp AAGCGCAGGAACACGTCCAGCCTCCCGTCCTCTGCCTaGATGGCCCGCTGGGCTGCGCTCCTGAAATGCGTG +
Preference number: 6 (lower is better)
Translates to: KRRNTSSLPSSA*MARWAALLKCV
Trigger: CACGCATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAGGCTGGACGTGTTCCTGCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp GAGGAAGCGCAGGAACACGTCCAGCCTCCCGTCCTCTaGCTGCATGGCCCGCTGGGCTGCGCTCCTGAAATG +
Preference number: 6 (lower is better)
Translates to: EEAQEHVQPPVL*LHGPLGCAPEM
Trigger: CATTTCAGGAGCGCAGCCCAGCGGGCCATGCAGGCAGAGGACGGGAGGCTGGACGTGTTCCTGCGCTTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp CAGCTCATGCAGGCAGTGCAACACGTTGATGGCCCGTaGACAGACTGCGGCATCGGGGCGCAGGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: QLMQAVQHVDGP*TDCGIGAQAAL
Trigger: CAGGGCTGCCTGCGCCCCGATGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp GCCCAGAGGCGGACGAAGTGCCTCACCAGGGTGGTCTaGCCCATGCCGGCCACCCCGATAGTGATGGAGACC +
Preference number: 6 (lower is better)
Translates to: AQRRTKCLTRVV*PMPATPIVMET
Trigger: GGTCTCCATCACTATCGGGGTGGCCGGCATGGGCAAGACCACCCTGGTGAGGCACTTCGTCCGCCTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp CCATGGAAGGCCAGACGGCCCAATGTCCCCACCATCTaGCGGCCACCATGGGCCACCTGCTCGATGCGAGGG +
Preference number: 6 (lower is better)
Translates to: PWKARRPNVPTI*RPPWATCSMRG
Trigger: CCCTCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGATGGTGGGGACATTGGGCCGTCTGGCCTTCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 72 bp GGGAGCCTTGACTGCCCTTCCCAGCCAGCAGATCCATaGGGGCTTTCACCTGCTCGGCTGGGGAGCCCGTAC +
Preference number: 6 (lower is better)
Translates to: GSLDCPSQPADP*GLSPARLGSPY
Trigger: GTACGGGCTCCCCAGCCGAGCAGGTGAAAGCCCTCATGGATCTGCTGGCTGGGAAGGGCAGTCAAGGCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp GTGGCCTCCACCTGTGTGAAGTCGTGTTCCCTCAGCTaGAGGTCCGTCAGGCCCTCCACCAGCAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: VASTCVKSCSLS*RSVRPSTSRRE
Trigger: CTCCCTCCTGCTGGTGGAGGGCCTGACGGACCTGCAGCTGAGGGAACACGACTTCACACAGGTGGAGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp CGGGCCAGCTCGGTGTGCTGCAGCTCATGCAGGCAGTaGAACACGTTGATGGCCCGTGCACAGACTGCGGCA +
Preference number: 6 (lower is better)
Translates to: RASSVCCSSCRQ*NTLMARAQTAA
Trigger: TGCCGCAGTCTGTGCACGGGCCATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp CTCAGCACGCTGCCCAGCAGCTCCATCACGGGGTCCTaGAACTGGTTGGTGTCCAGCCTGAGCTTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: LSTLPSSSITGS*NWLVSSLSFRQ
Trigger: CTGCCGGAAGCTCAGGCTGGACACCAACCAGTTCCAGGACCCCGTGATGGAGCTGCTGGGCAGCGTGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp GTGTTGAGATCCCGGAAGGTCAGAGGCAGCACCAGCGAGAAGTCCTaGCCGACCTGCCCATGGGCCCAGAGGCGGACGAAGTGCCTCACC +
Preference number: 6 (lower is better)
Translates to: VLRSRKVRGSTSEKS*PTCPWAQRRTKCLT
Trigger: GGTGAGGCACTTCGTCCGCCTCTGGGCCCATGGGCAGGTCGGCAAGGACTTCTCGCTGGTGCTGCCTCTGACCTTCCGGGATCTCAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp GGCTGGGACGGTGCACATCAGGTACAGGGCCCTGTCAGCCTGCACTaGGCTCAGCATCCAGCCCAGAAGGGCCTGGTCCTCGGGGAACAT +
Preference number: 6 (lower is better)
Translates to: GWDGAHQVQGPVSLH*AQHPAQKGLVLGEH
Trigger: ATGTTCCCCGAGGACCAGGCCCTTCTGGGCTGGATGCTGAGCCAAGTGCAGGCTGACAGGGCCCTGTACCTGATGTGCACCGTCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp ATCTTGCGGCCACCATGGGCCACCTGCTCGATGCGAGGGCTTGCCTaGCCCTTCTCCTGCCCCTCCCCGCTGAGGGCCATCCTAAAGTAC +
Preference number: 6 (lower is better)
Translates to: ILRPPWATCSMRGLA*PFSCPSPLRAILKY
Trigger: GTACTTTAGGATGGCCCTCAGCGGGGAGGGGCAGGAGAAGGGCAAGGCAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp TTGAGCAGCCCATGGAAGGCCAGACGGCCCAATGTCCCCACCATCTaGCGGCCACCATGGGCCACCTGCTCGATGCGAGGGCTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: LSSPWKARRPNVPTI*RPPWATCSMRGLAL
Trigger: CAAGGCAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGATGGTGGGGACATTGGGCCGTCTGGCCTTCCATGGGCTGCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 72 bp CTTCCTCATGGAGTCGGGGATCACCTCCAGGAGCTGTaGAGAGAGGGCCTGAACCTGCTGCCTGCCGTGCCC +
Preference number: 6 (lower is better)
Translates to: LPHGVGDHLQEL*REGLNLLPAVP
Trigger: GGGCACGGCAGGCAGCAGGTTCAGGCCCTCTCTTCACAGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324659.12
CDS TCA 72 bp GGAAGCCCAGCCTGGGCCAGGATACGCCGCTCTCAGTaGAGAGGTCGAAGATGGCCCTCCTGGATGCGCCAT +
Preference number: 6 (lower is better)
Translates to: GSPAWARIRRSQ*RGRRWPSWMRH
Trigger: ATGGCGCATCCAGGAGGGCCATCTTCGACCTCTTCACTGAGAGCGGCGTATCCTGGCCCAGGCTGGGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp TGCAGGCCACGGTGTTGGAGAAGTCCAGAGGCGTCCTaGACTCATCCAAGCCGTCCAGGATCAGGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: CRPRCWRSPEAS*THPSRPGSGGP
Trigger: GGGCCCTCCTGATCCTGGACGGCTTGGATGAGTGCAGGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp AATGTCCCCACCATCTTGCGGCCACCATGGGCCACCTaGTCGATGCGAGGGCTTGCCTTGCCCTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: NVPTILRPPWAT*SMRGLALPFSC
Trigger: GCAGGAGAAGGGCAAGGCAAGCCCTCGCATCGAGCAGGTGGCCCATGGTGGCCGCAAGATGGTGGGGACATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp ACGATGCCAACGTCTCCTCTCTCTGCAGGAAGCAGCTaGACGGGGCGCCCTGCAGCAGAGCGAGGTCTACAC +
Preference number: 6 (lower is better)
Translates to: TMPTSPLSAGSS*TGRPAAERGLH
Trigger: GTGTAGACCTCGCTCTGCTGCAGGGCGCCCCGTGCAGCTGCTTCCTGCAGAGAGAGGAGACGTTGGCATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp TCCATGGCCTCCTCCACGCTGCGGGCCAGCTCGGTGTaGTGCAGCTCATGCAGGCAGTGCAACACGTTGATG +
Preference number: 6 (lower is better)
Translates to: SMASSTLRASSV*CSSCRQCNTLM
Trigger: CATCAACGTGTTGCACTGCCTGCATGAGCTGCAGCACACCGAGCTGGCCCGCAGCGTGGAGGAGGCCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp CGGCCTCCCTGCCCGTCCGCACCTCTTGCTTCCTCATaGAGTCGGGGATCACCTCCAGGAGCTGTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: RPPCPSAPLASS*SRGSPPGAVKR
Trigger: TCTCTTCACAGCTCCTGGAGGTGATCCCCGACTCCATGAGGAAGCAAGAGGTGCGGACGGGCAGGGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324659.12
CDS CCA 72 bp GATCAGGGCACTTACCACGCCAACCAACCAACCGTGTaGGGGCCGAGAGCAGTGCAGCCCCGACCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: DQGTYHANQPTV*GPRAVQPRPSA
Trigger: TGCAGAAGGTCGGGGCTGCACTGCTCTCGGCCCCCACACGGTTGGTTGGTTGGCGTGGTAAGTGCCCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp GTGTTGCCCTGGAGGCTCAGGGAGGTCAGGGTGCGGTaGATCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: VLPWRLREVRVR*IFKASASALAP
Trigger: AGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCTGAGCCTCCAGGGCAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000618137.1
CDS CAA 72 bp CCTTGCTCAGCAGGGCCTTGCGGTGCCTCTGTATCCTaGAGTCTGCGGGACAGAGGCCAGTGGGGAGGTCGT +
Preference number: 6 (lower is better)
Translates to: PCSAGPCGASVS*SLRDRGQWGGR
Trigger: ACGACCTCCCCACTGGCCTCTGTCCCGCAGACTCAAGGATACAGAGGCACCGCAAGGCCCTGCTGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603055.1
CDS CAA 90 bp TGGTCCACCGGGATCTCCTTCTTTGGGTCCGTGCAGGCCACGGTGTaGGAGAAGTCCAGAGGCGTCCTGCACTCATCCAAGCCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: WSTGISFFGSVQATV*EKSRGVLHSSKPSR
Trigger: CCTGGACGGCTTGGATGAGTGCAGGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS TCA 72 bp TGTTGCCCTGGAGGCTCAGGGAGGTCAGGGTGCGGTTaGTCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCTT +
Preference number: 6 (lower is better)
Translates to: CCPGGSGRSGCG*SSKRLPAPWPL
Trigger: AAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCTGAGCCTCCAGGGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000618137.1
CDS TCA 72 bp GGAGTCGGGGATCACCTCCAGGAGCAGATAGGTGACTaGGGGCAGGCTGAGTCACCTCTCTGCGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GVGDHLQEQIGD*GQAESPLCALV
Trigger: CACCAAGGCGCAGAGAGGTGACTCAGCCTGCCCTCAGTCACCTATCTGCTCCTGGAGGTGATCCCCGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp TCAGGTGGTCCACCGGGATCTCCTTCTTTGGGTCCGTaGAGGCCACGGTGTTGGAGAAGTCCAGAGGCGTCC +
Preference number: 6 (lower is better)
Translates to: SGGPPGSPSLGP*RPRCWRSPEAS
Trigger: GGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp CATCCGGTCCACCAGGCCCCCTGGGATCTGGCCAGATaGACTGGGACGGGAGGTGATCCAGATGGAAACTTC +
Preference number: 6 (lower is better)
Translates to: HPVHQAPWDLAR*TGTGGDPDGNF
Trigger: GAAGTTTCCATCTGGATCACCTCCCGTCCCAGTGCATCTGGCCAGATCCCAGGGGGCCTGGTGGACCGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 72 bp AGTTCCACTGCAGGTCCAGGTTCTTCAGGGTGCTGTTaGCGCAGAGGGCATGAGCGATGGCCTGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SSTAGPGSSGCC*RRGHERWPGLP
Trigger: AGGGAGCCCAGGCCATCGCTCATGCCCTCTGCGCCAACAGCACCCTGAAGAACCTGGACCTGCAGTGGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618137.1
CDS CAA 72 bp TCAGCCATGGACCTGGCACCATCATCCCTAACGGTGTaGCCCTGGAGGCTCAGGGAGGTCAGGGTGCGGTTG +
Preference number: 6 (lower is better)
Translates to: SAMDLAPSSLTV*PWRLREVRVRL
Trigger: CAACCGCACCCTGACCTCCCTGAGCCTCCAGGGCAACACCGTTAGGGATGATGGTGCCAGGTCCATGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000618137.1
CDS CAA 90 bp AGGGAGGTCAGGGTGCGGTTGATCTTCAAAGCGTCTGCCAGCGCCTaGGCCCCTTGTGGTCCAATGGAGTTACCGCGGAGGTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: REVRVRLIFKASASA*APCGPMELPRRSRE
Trigger: CTCTCTGGACCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp AAGCGTCTGCCAGCGCCTTGGCCCCTTGTGGTCCAATaGAGTTACCGCGGAGGTCCAGAGAGGTCAGACTTC +
Preference number: 6 (lower is better)
Translates to: KRLPAPWPLVVQ*SYRGGPERSDF
Trigger: GAAGTCTGACCTCTCTGGACCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp CAGATGAGTCGGTCGGCACACAGCTTCTCGTGGGTGTaGAGATCCCGGAAGGTCAGAGGCAGCACCAGCGAG +
Preference number: 6 (lower is better)
Translates to: QMSRSAHSFSWV*RSRKVRGSTSE
Trigger: CTCGCTGGTGCTGCCTCTGACCTTCCGGGATCTCAACACCCACGAGAAGCTGTGTGCCGACCGACTCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp AGGGTGCGGTTGATCTTCAAAGCGTCTGCCAGCGCCTaGGCCCCTTGTGGTCCAATGGAGTTACCGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RVRLIFKASASA*APCGPMELPRR
Trigger: CCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
ENST00000618137.1
CDS CAA 90 bp CCCAGAAGGGCCTGGTCCTCGGGGAACATCTGCTCCAAACACACCTaGATCTCCTCCTCGTTAAAGCCCCGGATCTCCGTCATCCGGTCC +
Preference number: 6 (lower is better)
Translates to: PRRAWSSGNICSKHT*ISSSLKPRISVIRS
Trigger: GGACCGGATGACGGAGATCCGGGGCTTTAACGAGGAGGAGATCAAGGTGTGTTTGGAGCAGATGTTCCCCGAGGACCAGGCCCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp CAGGGTGCGGTTGATCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCTaGTGGTCCAATGGAGTTACCGCGGAGGTCCAGAGAGGTCAGACT +
Preference number: 6 (lower is better)
Translates to: QGAVDLQSVCQRLGP*WSNGVTAEVQRGQT
Trigger: AGTCTGACCTCTCTGGACCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 72 bp CCCCTGGGATCTGGCCAGATGCACTGGGACGGGAGGTaGTCCAGATGGAAACTTCCGGAAAGAGGTTGCCAC +
Preference number: 6 (lower is better)
Translates to: PLGSGQMHWDGR*SRWKLPERGCH
Trigger: GTGGCAACCTCTTTCCGGAAGTTTCCATCTGGATCACCTCCCGTCCCAGTGCATCTGGCCAGATCCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS GCA 72 bp CAGGGAGGTCAGGGTGCGGTTGATCTTCAAAGCGTCTaGCAGCGCCTTGGCCCCTTGTGGTCCAATGGAGTT +
Preference number: 6 (lower is better)
Translates to: QGGQGAVDLQSV*QRLGPLWSNGV
Trigger: AACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
ENST00000618137.1
CDS CCA 72 bp GGATCTCCTTCTTTGGGTCCGTGCAGGCCACGGTGTTaGAGAAGTCCAGAGGCGTCCTGCACTCATCCAAGC +
Preference number: 6 (lower is better)
Translates to: GSPSLGPCRPRC*RSPEASCTHPS
Trigger: GCTTGGATGAGTGCAGGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 72 bp GTTGGTGATCAGGTGGTCCACCGGGATCTCCTTCTTTaGGTCCGTGCAGGCCACGGTGTTGGAGAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: VGDQVVHRDLLL*VRAGHGVGEVQ
Trigger: CTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGATCACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 72 bp GATCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCTTGTaGTCCAATGGAGTTACCGCGGAGGTCCAGAGAGGT +
Preference number: 6 (lower is better)
Translates to: DLQSVCQRLGPL*SNGVTAEVQRG
Trigger: ACCTCTCTGGACCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp GGGATCTCCTTCTTTGGGTCCGTGCAGGCCACGGTGTaGGAGAAGTCCAGAGGCGTCCTGCACTCATCCAAG +
Preference number: 6 (lower is better)
Translates to: GISFFGSVQATV*EKSRGVLHSSK
Trigger: CTTGGATGAGTGCAGGACGCCTCTGGACTTCTCCAACACCGTGGCCTGCACGGACCCAAAGAAGGAGATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp AAGACCGAGCAGATGAGTCGGTCGGCACACAGCTTCTCGTGGGTGTaGAGATCCCGGAAGGTCAGAGGCAGCACCAGCGAGAAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: KTEQMSRSAHSFSWV*RSRKVRGSTSEKSL
Trigger: CAAGGACTTCTCGCTGGTGCTGCCTCTGACCTTCCGGGATCTCAACACCCACGAGAAGCTGTGTGCCGACCGACTCATCTGCTCGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp GCACTGGGACGGGAGGTGATCCAGATGGAAACTTCCGGAAAGAGGTaGCCACGGATGATGTTGGTGATCAGGTGGTCCACCGGGATCTCC +
Preference number: 6 (lower is better)
Translates to: ALGREVIQMETSGKR*PRMMLVIRWSTGIS
Trigger: GGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTTCCGGAAGTTTCCATCTGGATCACCTCCCGTCCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp GAGTTACCGCGGAGGTCCAGAGAGGTCAGACTTCTGTaGACCAAGAGGGATCTGGCCAGAGCTTTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: ELPRRSREVRLL*TKRDLARALAP
Trigger: AGGGGCCAAAGCTCTGGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCTCTCTGGACCTCCGCGGTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp GTTGATCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCTaGTGGTCCAATGGAGTTACCGCGGAGGTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: VDLQSVCQRLGP*WSNGVTAEVQR
Trigger: TCTCTGGACCTCCGCGGTAACTCCATTGGACCACAAGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS GCA 72 bp GCTCTCAGTGAAGAGGTCGAAGATGGCCCTCCTGGATaGGCCATAGTAATACGCGGCTGCCACAAACTCCTG +
Preference number: 6 (lower is better)
Translates to: ALSEEVEDGPPG*AIVIRGCHKLL
Trigger: CAGGAGTTTGTGGCAGCCGCGTATTACTATGGCGCATCCAGGAGGGCCATCTTCGACCTCTTCACTGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CCA 72 bp GGAAAGAGGTTGCCACGGATGATGTTGGTGATCAGGTaGTCCACCGGGATCTCCTTCTTTGGGTCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: GKRLPRMMLVIR*STGISFFGSVQ
Trigger: CTGCACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 72 bp TACATGAATTTCACCCTCAGGGAGGTCAGGGTGCGGTaGATCTTCAAAGCGTCTGCCAGCGCCTTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: YMNFTLREVRVR*IFKASASALAP
Trigger: AGGGGCCAAGGCGCTGGCAGACGCTTTGAAGATCAACCGCACCCTGACCTCCCTGAGGGTGAAATTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS CAA 90 bp GGTCCAATGGAGTTACCGCGGAGGTCCAGAGAGGTCAGACTTCTGTaGACCAAGAGGGATCTGGCCAGAGCTTTGGCCCCTTTGTTACTG +
Preference number: 6 (lower is better)
Translates to: GPMELPRRSREVRLL*TKRDLARALAPLLL
Trigger: CAGTAACAAAGGGGCCAAAGCTCTGGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCTCTCTGGACCTCCGCGGTAACTCCATTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp CGGGAGGTGATCCAGATGGAAACTTCCGGAAAGAGGTaGCCACGGATGATGTTGGTGATCAGGTGGTCCACC +
Preference number: 6 (lower is better)
Translates to: REVIQMETSGKR*PRMMLVIRWST
Trigger: GGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTTCCGGAAGTTTCCATCTGGATCACCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp GTGATCCAGATGGAAACTTCCGGAAAGAGGTTGCCACGGATGATGTaGGTGATCAGGTGGTCCACCGGGATCTCCTTCTTTGGGTCCGTG +
Preference number: 6 (lower is better)
Translates to: VIQMETSGKRLPRMM*VIRWSTGISFFGSV
Trigger: CACGGACCCAAAGAAGGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTTCCGGAAGTTTCCATCTGGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CAA 90 bp GGCGCCCTGCAGCAGAGCGAGGTCTACACCAAACGCCTTCATGTCTaGCTCGTAAAACACGTATTTCTTCTTGAGCAGCCCATGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GALQQSEVYTKRLHV*LVKHVFLLEQPMEG
Trigger: GCCTTCCATGGGCTGCTCAAGAAGAAATACGTGTTTTACGAGCAAGACATGAAGGCGTTTGGTGTAGACCTCGCTCTGCTGCAGGGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp TTGACCAAGAGGGATCTGGCCAGAGCTTTGGCCCCTTaGTTACTGATCTGGTTCTCCGCCAAGCTGATCTTC +
Preference number: 6 (lower is better)
Translates to: LTKRDLARALAP*LLIWFSAKLIF
Trigger: GAAGATCAGCTTGGCGGAGAACCAGATCAGTAACAAAGGGGCCAAAGCTCTGGCCAGATCCCTCTTGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp AGACTTCTGTTGACCAAGAGGGATCTGGCCAGAGCTTaGGCCCCTTTGTTACTGATCTGGTTCTCCGCCAAG +
Preference number: 6 (lower is better)
Translates to: RLLLTKRDLARA*APLLLIWFSAK
Trigger: CTTGGCGGAGAACCAGATCAGTAACAAAGGGGCCAAAGCTCTGGCCAGATCCCTCTTGGTCAACAGAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 90 bp AGAGAGGTCAGACTTCTGTTGACCAAGAGGGATCTGGCCAGAGCTTaGGCCCCTTTGTTACTGATCTGGTTCTCCGCCAAGCTGATCTTC +
Preference number: 6 (lower is better)
Translates to: REVRLLLTKRDLARA*APLLLIWFSAKLIF
Trigger: GAAGATCAGCTTGGCGGAGAACCAGATCAGTAACAAAGGGGCCAAAGCTCTGGCCAGATCCCTCTTGGTCAACAGAAGTCTGACCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS TCA 72 bp CCTTCATGTCTTGCTCGTAAAACACGTATTTCTTCTTaGGCAGCCCATGGAAGGCCAGACGGCCCAATGTCC +
Preference number: 6 (lower is better)
Translates to: PSCLARKTRISS*AAHGRPDGPMS
Trigger: GGACATTGGGCCGTCTGGCCTTCCATGGGCTGCTCAAGAAGAAATACGTGTTTTACGAGCAAGACATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4
CDS CAA 72 bp ATGGAAACTTCCGGAAAGAGGTTGCCACGGATGATGTaGGTGATCAGGTGGTCCACCGGGATCTCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: METSGKRLPRMM*VIRWSTGISFF
Trigger: AAAGAAGGAGATCCCGGTGGACCACCTGATCACCAACATCATCCGTGGCAACCTCTTTCCGGAAGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000603055.1
ENST00000615877.4
CDS CCA 72 bp TCAGCCTCTGGGACCCGCCTAAAACAGTCAATTTTATaGTACATGAATTTCACCCTCAGGGAGGTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: SASGTRLKQSIL*YMNFTLREVRV
Trigger: CACCCTGACCTCCCTGAGGGTGAAATTCATGTACCATAAAATTGACTGTTTTAGGCGGGTCCCAGAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615877.4
CDS CAA 72 bp CAGCAGAGCGAGGTCTACACCAAACGCCTTCATGTCTaGCTCGTAAAACACGTATTTCTTCTTGAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: QQSEVYTKRLHV*LVKHVFLLEQP
Trigger: GGGCTGCTCAAGAAGAAATACGTGTTTTACGAGCAAGACATGAAGGCGTTTGGTGTAGACCTCGCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324659.12
ENST00000359128.10
ENST00000615877.4