RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLGN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196338

Ensembl transcript IDs: ENST00000358741.4, ENST00000374051.7, ENST00000395855.6, ENST00000476589.1, ENST00000536169.5

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGCAGGCTCTaGAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: ANAVGLWGSRSPCRL*SPPHGHRESWRSLP
Trigger: GGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCAGAGCCTGCAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR GCA 90 bp GCTATCCTGCTCTTTAAAGCTCCCAAGTCTGGAGTTGGTCGGTGGTaGAGTTCCAAGAGAGGCCGAAGGCGAGCACCAAGGGGGTGTCCA +
Preference number: 1 (lower is better)
Translates to: AILLFKAPKSGVGRW*SSKRGRRRAPRGCP
Trigger: TGGACACCCCCTTGGTGCTCGCCTTCGGCCTCTCTTGGAACTGCACCACCGACCAACTCCAGACTTGGGAGCTTTAAAGAGCAGGATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CCA 90 bp AGAGCTATCCTGCTCTTTAAAGCTCCCAAGTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGCCGAAGGCGAGCACCAAGGGGGTGT +
Preference number: 1 (lower is better)
Translates to: RAILLFKAPKSGVGR*CSSKRGRRRAPRGC
Trigger: ACACCCCCTTGGTGCTCGCCTTCGGCCTCTCTTGGAACTGCACCACCGACCAACTCCAGACTTGGGAGCTTTAAAGAGCAGGATAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR GCA 90 bp ATATGTGTGTGTGTGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGGGAGGGAGGGAGCCTGGAGATTGGC +
Preference number: 1 (lower is better)
Translates to: ICVCVCVSACVCVCV*MCSWIWEGGSLEIG
Trigger: GCCAATCTCCAGGCTCCCTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACACACACACACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CCA 90 bp GTGTCTGTGGTCAGATTCAGGGAGCTGGCTTCAGCTGCTGTTTCATaGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAG +
Preference number: 1 (lower is better)
Translates to: VSVVRFRELASAAVS*VLGLPRTHLRPHLK
Trigger: CTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAGCCAGCTCCCTGAATCTGACCACAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR GCA 90 bp GTGTTTTTGTACATGCGGGTGCATGTCCACATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATAT +
Preference number: 1 (lower is better)
Translates to: VFLYMRVHVHICLCL*RWICCRVWVRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACAAACATAGACAGATGTGGACATGCACCCGCATGTACAAAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CCA 90 bp TTGTACATGCGGGTGCATGTCCACATCTGTCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGT +
Preference number: 1 (lower is better)
Translates to: LYMRVHVHICLCLCR*ICCRVWVRAYTYMC
Trigger: ACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACAAACATAGACAGATGTGGACATGCACCCGCATGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGCCCCAGGAGTGTCTGTaGTCAGATTCAGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLPQECL*SDSGSW
Trigger: CCAGCTCCCTGAATCTGACCACAGACACTCCTGGGG...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 90 bp TGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTaGGCCTTTGGGGAAGCAGGTCACCCTGCAGGCTCTGCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: CSPNLRSPGLARPML*AFGEAGHPAGSAAL
Trigger: GAGGGCTGCAGAGCCTGCAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR TCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTCTTGTTCCTTGGTCTaGTTGTGTGAGCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLSCSLV*LCEHWG
Trigger: CCCCCAGTGCTCACACAATCAGACCAAGGAACAAGA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR TCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCTCTTGTTCCTTGGTCTaGTTGTGTGAGCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPSCSLV*LCEHWG
Trigger: CCCCCAGTGCTCACACAATCAGACCAAGGAACAAGA...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPSGVGR*CSSKRG
Trigger: GCCTCTCTTGGAACTGCACCACCGACCAACTCCAGA...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGGGGGTCTTGTTCCTTaGTCTGATTGTGTGAGCACT +
Preference number: 2 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPGGLVP*SDCVST
Trigger: AGTGCTCACACAATCAGACCAAGGAACAAGACCCCC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 90 bp GGGGAGGAAGAGCTATCCTGCTCTTTAAAGCTCCCAAGTCTGGAGTaGGTCGGTGGTGCAGTTCCAAGAGAGGCCGAAGGCGAGCACCAA +
Preference number: 2 (lower is better)
Translates to: GEEELSCSLKLPSLE*VGGAVPREAEGEHQ
Trigger: TTGGTGCTCGCCTTCGGCCTCTCTTGGAACTGCACCACCGACCAACTCCAGACTTGGGAGCTTTAAAGAGCAGGATAGCTCTTCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGGAGCTGGCTTCAGCTaGTGTTTCATGGGTCCTCGG +
Preference number: 2 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGGAGFS*CFMGPR
Trigger: CCGAGGACCCATGAAACAGCAGCTGAAGCCAGCTCC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCATCTGCTGTAGGGTGTaGGTGCGTGCGTATACATAT +
Preference number: 2 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPICCRV*VRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGAT...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTCAGATTCAGGGAGCTaGCTTCAGCTGCTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLSDSGS*LQLLFH
Trigger: ATGAAACAGCAGCTGAAGCCAGCTCCCTGAATCTGA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR TCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTAGAGACCTTCGGGCCTaGAGCCCTCCCTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: HSTLFTKSKVTWSGQANARDLRA*SPPFQR
Trigger: CCTCTGGAAGGGAGGGCTTCAGGCCCGAAGGTCTCT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR TCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATAGAGACCTTCGGGCCTaGAGCCCTCCCTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANRDLRA*SPPFQR
Trigger: CCTCTGGAAGGGAGGGCTTCAGGCCCGAAGGTCTCT...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCGGAGTTGGTCGGTGGTaGAGTTCCAAGAGAGGCCGA +
Preference number: 2 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTGVGRW*SSKRGR
Trigger: TCGGCCTCTCTTGGAACTGCACCACCGACCAACTCC...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTCAGCTGCTGTTTCATaGGTCCTCGGTTTACCGAGG +
Preference number: 2 (lower is better)
Translates to: RCSPNLRSPGLARPMLLASAAVS*VLGLPR
Trigger: CCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTCTCCTTCCACCCCATaGTCTTGCTTAAATCTGTTT +
Preference number: 2 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLSPSTP*SCLNLF
Trigger: AAACAGATTTAAGCAAGACCATGGGGTGGAAGGAGA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTTGTGCAGGTGGATCTaGTGTAGGGTGTGGGTGCGT +
Preference number: 2 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTLCRWI*CRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPICLCL*RWICCR
Trigger: CCTACAGCAGATCCACCTGCACAAACATAGACAGAT...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGGAGTTGGTCGGTGGTaGAGTTCCAAGAGAGGCCGA +
Preference number: 2 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLGVGRW*SSKRGR
Trigger: TCGGCCTCTCTTGGAACTGCACCACCGACCAACTCC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGAGGAAGAGCTATCCTaGTCTTTAAAGCTCCCAAGT +
Preference number: 2 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPEEELS*SLKLPS
Trigger: ACTTGGGAGCTTTAAAGAGCAGGATAGCTCTTCCTC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: RCSPNLRSPGLARPMLLALCLCR*ICCRVW
Trigger: CCACACCCTACAGCAGATCCACCTGCACAAACATAG...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTSGVGR*CSSKRG
Trigger: GCCTCTCTTGGAACTGCACCACCGACCAACTCCAGA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGGGGGTCTTGTTCCTTaGTCTGATTGTGTGAGCACT +
Preference number: 2 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGGGLVP*SDCVST
Trigger: AGTGCTCACACAATCAGACCAAGGAACAAGACCCCC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGCTGTAGGGTGTGGGTaGGTGCGTATACATATATGT +
Preference number: 2 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAAVGCG*VRIHIC
Trigger: ACATATATGTATACGCACGCACCCACACCCTACAGC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGGAGCTGGCTTCAGCTaGTGTTTCATGGGTCCTCGG +
Preference number: 2 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANGAGFS*CFMGPR
Trigger: CCGAGGACCCATGAAACAGCAGCTGAAGCCAGCTCC...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTCAGATTCAGGGAGCTaGCTTCAGCTGCTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: RCSPNLRSPGLARPMLLASDSGS*LQLLFH
Trigger: ATGAAACAGCAGCTGAAGCCAGCTCCCTGAATCTGA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTACCCCAGGAGTGTCTGTaGTCAGATTCAGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLPQECL*SDSGSW
Trigger: CCAGCTCCCTGAATCTGACCACAGACACTCCTGGGG...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTCCCAAGTCTGGAGTTaGTCGGTGGTGCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTSQVWS*SVVQFQ
Trigger: TTGGAACTGCACCACCGACCAACTCCAGACTTGGGA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCTTAGCACTCATGGGTTaGAAAAGCATTTGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPLALMG*KSICSK
Trigger: TTTGGAACAAATGCTTTTCCAACCCATGAGTGCTAA...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTCTTGTTCCTTGGTCTaGTTGTGTGAGCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLSCSLV*LCEHWG
Trigger: CCCCCAGTGCTCACACAATCAGACCAAGGAACAAGA...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATTTGTGCAGGTGGATCTaGTGTAGGGTGTGGGTGCGT +
Preference number: 2 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANLCRWI*CRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAA...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTGTGCAGGTGGATCTaGTGTAGGGTGTGGGTGCGT +
Preference number: 2 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYLCRWI*CRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAA...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTCAGCTGCTGTTTCATaGGTCCTCGGTTTACCGAGG +
Preference number: 2 (lower is better)
Translates to: HSTLFTKSKVTWSGQANASAAVS*VLGLPR
Trigger: CCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGG +
Preference number: 2 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLVCVCV*MCSWIW
Trigger: CCAGATCCAGGAACACATGCACACACACACACACAC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGGCTGTAGGGTGTGGGTaGGTGCGTATACATATATGT +
Preference number: 2 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLAVGCG*VRIHIC
Trigger: ACATATATGTATACGCACGCACCCACACCCTACAGC...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATTCCCAAGTCTGGAGTTaGTCGGTGGTGCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANSQVWS*SVVQFQ
Trigger: TTGGAACTGCACCACCGACCAACTCCAGACTTGGGA...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGG +
Preference number: 2 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYVCVCV*MCSWIW
Trigger: CCAGATCCAGGAACACATGCACACACACACACACAC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTTTTGTACATGCGGGTaGATGTCCACATCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTFCTCG*MSTSVY
Trigger: ATAGACAGATGTGGACATGCACCCGCATGTACAAAA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTCCACCCCATGGTCTTaGTTAAATCTGTTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: HSTLFTKSKVTWSGQANASTPWS*LNLFPS
Trigger: GGAAGGAAACAGATTTAAGCAAGACCATGGGGTGGA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTCCACCCCATGGTCTTaGTTAAATCTGTTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLSTPWS*LNLFPS
Trigger: GGAAGGAAACAGATTTAAGCAAGACCATGGGGTGGA...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAATCTGCTGTAGGGTGTaGGTGCGTGCGTATACATAT +
Preference number: 2 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLICCRV*VRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGAT...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATATCTGCTGTAGGGTGTaGGTGCGTGCGTATACATAT +
Preference number: 2 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANICCRV*VRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGAT...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTTAGCACTCATGGGTTaGAAAAGCATTTGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGLALMG*KSICSK
Trigger: TTTGGAACAAATGCTTTTCCAACCCATGAGTGCTAA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAAATCTGTTTCCTTCCTaGGGGTCTTGTTCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLNLFPS*GSCSLV
Trigger: GACCAAGGAACAAGACCCCCAGGAAGGAAACAGATT...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 90 bp GTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTaGTTCAGGTTTACTTCCGTATTTGTGTTTTTGTACATGCGGGTG +
Preference number: 2 (lower is better)
Translates to: VLGLPRTHLRPHLKG*FRFTSVFVFLYMRV
Trigger: CACCCGCATGTACAAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTTTGTACATGCGGGTaGATGTCCACATCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLFCTCG*MSTSVY
Trigger: ATAGACAGATGTGGACATGCACCCGCATGTACAAAA...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSICLCL*RWICCR
Trigger: CCTACAGCAGATCCACCTGCACAAACATAGACAGAT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTTAGCACTCATGGGTTaGAAAAGCATTTGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTLALMG*KSICSK
Trigger: TTTGGAACAAATGCTTTTCCAACCCATGAGTGCTAA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCTTTTGTACATGCGGGTaGATGTCCACATCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSFCTCG*MSTSVY
Trigger: ATAGACAGATGTGGACATGCACCCGCATGTACAAAA...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 90 bp CCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTaGTACATGCGGGTGCATGTCCACATCTGTCTATGTTTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: PHLKGLFRFTSVFVF*YMRVHVHICLCLCR
Trigger: CCTGCACAAACATAGACAGATGTGGACATGCACCCGCATGTACAAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGG +
Preference number: 2 (lower is better)
Translates to: SASPFKGFVQVYFRICVFVCVCV*MCSWIW
Trigger: CCAGATCCAGGAACACATGCACACACACACACACAC...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: SASPFKGFVQVYFRICVFLCLCR*ICCRVW
Trigger: CCACACCCTACAGCAGATCCACCTGCACAAACATAG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR GCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: SASPFKGFVQVYFRICVFICLCL*RWICCR
Trigger: CCTACAGCAGATCCACCTGCACAAACATAGACAGAT...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTCCTTCCTGGGGGTCTaGTTCCTTGGTCTGATTGTG +
Preference number: 3 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLSFLGV*FLGLIV
Trigger: CACAATCAGACCAAGGAACAAGACCCCCAGGAAGGA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR TCA 72 bp TCCTTCCTGGGGGTCTTGTTCCTTGGTCTGATTGTGTaGGCACTGGGGGTCCTAGAGCCAGAGAGACCTTCG +
Preference number: 3 (lower is better)
Translates to: SFLGVLFLGLIV*ALGVLEPERPS
Trigger: CGAAGGTCTCTCTGGCTCTAGGACCCCCAGTGCTCACACAATCAGACCAAGGAACAAGACCCCCAGGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR GCA 72 bp TGTGTGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGGGAGGGAGGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: CVCVSACVCVCV*MCSWIWEGGSL
Trigger: CAGGCTCCCTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CCA 72 bp CTGCTCTTTAAAGCTCCCAAGTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGCCGAAGGCGAGCACCA +
Preference number: 3 (lower is better)
Translates to: LLFKAPKSGVGR*CSSKRGRRRAP
Trigger: TGGTGCTCGCCTTCGGCCTCTCTTGGAACTGCACCACCGACCAACTCCAGACTTGGGAGCTTTAAAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR GCA 72 bp TACATGCGGGTGCATGTCCACATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCG +
Preference number: 3 (lower is better)
Translates to: YMRVHVHICLCL*RWICCRVWVRA
Trigger: CGCACGCACCCACACCCTACAGCAGATCCACCTGCACAAACATAGACAGATGTGGACATGCACCCGCATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCCCCATTTAAAGGGTTaGTTCAGGTTTACTTCCGTA +
Preference number: 3 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPPHLKG*FRFTSV
Trigger: TACGGAAGTAAACCTGAACAAACCCTTTAAATGGGG...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCCAATGCTGTTGGCCTTaGGGGAAGCAGGTCACCCTG +
Preference number: 3 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTQCCWP*GKQVTL
Trigger: CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTG...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CCA 72 bp CGGGTGCATGTCCACATCTGTCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACA +
Preference number: 3 (lower is better)
Translates to: RVHVHICLCLCR*ICCRVWVRAYT
Trigger: TGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACAAACATAGACAGATGTGGACATGCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCCACATCTGTCTATGTTaGTGCAGGTGGATCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPHICLC*CRWICC
Trigger: ACAGCAGATCCACCTGCACAAACATAGACAGATGTG...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCACATCTGTCTATGTTaGTGCAGGTGGATCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKHICLC*CRWICC
Trigger: ACAGCAGATCCACCTGCACAAACATAGACAGATGTG...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATCCGTATTTGTGTTTTaGTACATGCGGGTGCATGTC +
Preference number: 3 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPSVFVF*YMRVHV
Trigger: GACATGCACCCGCATGTACAAAAACACAAATACGGA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR-3UTR CAA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCACATCTGTCTATGTTaGTGCAGGTGGATCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGHICLC*CRWICC
Trigger: ACAGCAGATCCACCTGCACAAACATAGACAGATGTG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CCA 72 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTaGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: FHSTLFTKSKVT*SGQANAVGLWG
Trigger: TCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGCTGCTGCAAGCGACTaGACCGGGCCACGGACCACC +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPAAASD*TGPRTT
Trigger: GGTGGTCCGTGGCCCGGTTCAGTCGCTTGCAGCAGC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGCCGGGTAGTGGAGTGTaGGTGGGGCAGCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLPGSGV*VGQPGT
Trigger: AGTACCGGGCTGCCCCACTCACACTCCACTACCCGG...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTGTTCCCCGGGCTGCTaGAAGCGACTGAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPCSPGC*KRLNRA
Trigger: GGCCCGGTTCAGTCGCTTGCAGCAGCCCGGGGAACA...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCGATGCCCGACCAGGATaGGGGTGGTTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPDARPG*GWFRGQ
Trigger: CTGCCCCCTGAACCACCCCCATCCTGGTCGGGCATC...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAGCCGATCGGGGGAGCTaGGTAGGGCACCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPADRGS*VGHPQV
Trigger: TACCTGGGGGTGCCCTACGCAGCTCCCCCGATCGGC...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCCTCCGGCAGCCTGGCTaGTGTGCCCGCGCACCGAGG +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLALRQPG*CARAPR
Trigger: CCTCGGTGCGCGGGCACAGCAGCCAGGCTGCCGGAG...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536169.5
CDS-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCGTTGACTGTGGGTGCTaGGGCCTGGGTACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPVDCGC*GLGTGP
Trigger: AGGGCCAGTACCCAGGCCCCAGCACCCACAGTCAAC...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGCTGGGGGAAAGTGTGTaGCGTTCCGGATGCCCGACC +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLLGESV*RSGCPT
Trigger: GGTCGGGCATCCGGAACGCCACACACTTTCCCCCAG...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCACCAGACCGGCAGCATaGCTTCGGGCACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPTRPAA*LRAQLC
Trigger: ACACAGCTGTGCCCGAAGTCATGCTGCCGGTCTGGT...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCCGAGCCAAAGACAGTaGTCCGGCGGGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKPSQRQ*SGGGLP
Trigger: GGGGAGACCCCCGCCGGATCACTGTCTTTGGCTCGG...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGCAGCCCGGTACTGTTaGACCCTGCGGCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPAARYC*TLRQRC
Trigger: ACACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTGGCTGGCCGCTTGGTaGTCCAGGTCTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLWLAAW*SRSCHW
Trigger: CCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATGCCAACCGTGGGCTTaGGGCTCAGGGACAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPCQPWA*GSGTAR
Trigger: CCTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGGAGGGCTCCACCCACTaGTGGTCAGTGAAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLEGSTH*WSVKSA
Trigger: GGCACTCTTCACTGACCACCAGTGGGTGGAGCCCTC...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGGGGGGACCGGCTTGTTaGGATCCCCAGTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLGGPAC*DPQSWQ
Trigger: TTGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCC...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAAGTGGCCCTGCATCCTaGTCCCCGTTCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPSGPAS*SPFQDP
Trigger: GGGGTCCTGGAACGGGGACCAGGATGCAGGGCCACT...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATGCCGCAGGGGCTCCTaGCGCCGTTTGTCCTTACGG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPCRRGS*RRLSLR
Trigger: CCGTAAGGACAAACGGCGCCAGGAGCCCCTGCGGCA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCGGCCTCACACTCGTaGTGGGTGGGGCCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPPASHS*WVGPSC
Trigger: ACAACTGGGCCCCACCCACCACGAGTGTGAGGCCGG...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGGTTGGGGGTCATGAGTaGGATGTCATCCGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLVGGHE*DVIRGA
Trigger: CGCTCCCCGGATGACATCCCACTCATGACCCCCAAC...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGCTGCTGCAAGCGACTaGACCGGGCCACGGACCACC +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGAAASD*TGPRTT
Trigger: GGTGGTCCGTGGCCCGGTTCAGTCGCTTGCAGCAGC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCCCGAGCCAAAGACAGTaGTCCGGCGGGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAPSQRQ*SGGGLP
Trigger: GGGGAGACCCCCGCCGGATCACTGTCTTTGGCTCGG...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCCGAGCCAAAGACAGTaGTCCGGCGGGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGPSQRQ*SGGGLP
Trigger: GGGGAGACCCCCGCCGGATCACTGTCTTTGGCTCGG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTAGTCGGGCAATGCAGTaGGGCGCAGCGTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPSRAMQ*GAACHG
Trigger: CCCATGACACGCTGCGCCTCACTGCATTGCCCGACT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGGCCTGTTCCCCGGGCTaGTGCAAGCGACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKACSPG*CKRLNR
Trigger: CCGGTTCAGTCGCTTGCAGCAGCCCGGGGAACAGGC...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGCCGATCGGGGGAGCTaGGTAGGGCACCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGADRGS*VGHPQV
Trigger: TACCTGGGGGTGCCCTACGCAGCTCCCCCGATCGGC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGGAGCTGGCTTCAGCTaGTGTTTCATGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPGAGFS*CFMGPR
Trigger: CCGAGGACCCATGAAACAGCAGCTGAAGCCAGCTCC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCGTCTGGCCAGGCCAATaGTGTTGGCCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPVWPGQ*CWPLGK
Trigger: CTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGAC...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCTGGGGGAAAGTGTGTaGCGTTCCGGATGCCCGACC +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPLGESV*RSGCPT
Trigger: GGTCGGGCATCCGGAACGCCACACACTTTCCCCCAG...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGCTGTGTGGATGTTCTaGGGGCACACTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPAVWMF*GHTGGK
Trigger: CTTTCCCCCAGTGTGCCCCCAGAACATCCACACAGC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTCGGGCACAGCTGTGTaGATGTTCTGGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPSGTAV*MFWGHT
Trigger: AGTGTGCCCCCAGAACATCCACACAGCTGTGCCCGA...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCAGATGGCTGGCCGCTTaGTGCTCCAGGTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPRWLAA*CSRSCH
Trigger: ATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCT...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGAGTGGCCCTGCATCCTaGTCCCCGTTCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKSGPAS*SPFQDP
Trigger: GGGGTCCTGGAACGGGGACCAGGATGCAGGGCCACT...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCCCAGGCCAATGCTGTTaGCCTTTGGGGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPPGQCC*PLGKQV
Trigger: GACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGG...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 72 bp CAGGCTCTGCAGCCCTCCACACGGACACAGAGAGAGTaGGAGATCTCTCCCCTACGACCCTCCAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: QALQPSTRTQRE*EISPLRPSSSI
Trigger: GATGGAGCTGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCAGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCTGGCCTTGGTGTGAATaGACTTGGTGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPWPWCE*TWCPGG
Trigger: TCCCCCAGGACACCAAGTTCATTCACACCAAGGCCA...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTGGCCTTGGTGTGAATaGACTTGGTGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPWPWCE*TWCPGG
Trigger: TCCCCCAGGACACCAAGTTCATTCACACCAAGGCCA...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCAGTCGGGCAATGCAGTaGGGCGCAGCGTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPSRAMQ*GAACHG
Trigger: CCCATGACACGCTGCGCCTCACTGCATTGCCCGACT...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGCAGCCCGGTACTGTTaGACCCTGCGGCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPAARYC*TLRQRC
Trigger: ACACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTTGGTCTGATTGTGTaGGCACTGGGGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPLGLIV*ALGVLE
Trigger: CTCTAGGACCCCCAGTGCTCACACAATCAGACCAAG...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCCCTGGGCATTCTCGTTaGTGTAGGCAGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPPGHSR*CRQVRW
Trigger: CCATCTCACCTGCCTACAGCAACGAGAATGCCCAGG...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCGTTGACTGTGGGTGCTaGGGCCTGGGTACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPVDCGC*GLGTGP
Trigger: AGGGCCAGTACCCAGGCCCCAGCACCCACAGTCAAC...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGGCCCCAGGATCTCACTaGGCAGTGGTACTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKAPGSH*AVVLGH
Trigger: GTGCCCGAGTACCACTGCCCAGTGAGATCCTGGGGC...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGATGCCCGACCAGGATaGGGGTGGTTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLADARPG*GWFRGQ
Trigger: CTGCCCCCTGAACCACCCCCATCCTGGTCGGGCATC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGGATGCCCGACCAGGATaGGGGTGGTTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGREDARPG*GWFRGQ
Trigger: CTGCCCCCTGAACCACCCCCATCCTGGTCGGGCATC...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCACCCAGCGGAGGGCCTaGATCTGGTCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPTQRRA*IWSRSP
Trigger: TGGGCTCCTTGACCAGATCCAGGCCCTCCGCTGGGT...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGAGGCGGCACTTTGGTaGTGGTGGACGTATAGTGGA +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPEAALW*WWTYSG
Trigger: TCCACTATACGTCCACCACCACCAAAGTGCCGCCTC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGAGTGGCCCTGCATCCTaGTCCCCGTTCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGSGPAS*SPFQDP
Trigger: GGGGTCCTGGAACGGGGACCAGGATGCAGGGCCACT...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGGTTCTCCACCAGGAGTaGCCCTGCATCCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKVLHQE*PCILVP
Trigger: GGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAAC...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTGCCGCAGGGGCTCCTaGCGCCGTTTGTCCTTACGG +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLACRRGS*RRLSLR
Trigger: CCGTAAGGACAAACGGCGCCAGGAGCCCCTGCGGCA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGGCTGCTGCAAGCGACTaGACCGGGCCACGGACCACC +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLAAASD*TGPRTT
Trigger: GGTGGTCCGTGGCCCGGTTCAGTCGCTTGCAGCAGC...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGAGAGACCTTCGGGCCTaGAGCCCTCCCTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGRDLRA*SPPFQR
Trigger: CCTCTGGAAGGGAGGGCTTCAGGCCCGAAGGTCTCT...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGAGTGTTGACTGTGGGTaGTGGGGCCTGGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKSVDCG*WGLGTG
Trigger: GCCAGTACCCAGGCCCCAGCACCCACAGTCAACACT...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGAGGCTGACGCAGGATaGACCAATGCCCGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPEADAG*TNARAK
Trigger: TTTGGCTCGGGCATTGGTGCATCCTGCGTCAGCCTC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCACCAGGAGTGGCCCTaGATCCTGGTCCCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGHQEWP*ILVPVP
Trigger: TGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAGTTCTGGGGGCACACTaGGGGAAAGTGTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPVLGAH*GKVCGV
Trigger: AACGCCACACACTTTCCCCCAGTGTGCCCCCAGAAC...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCACCCAGCGGAGGGCCTaGATCTGGTCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLATQRRA*IWSRSP
Trigger: TGGGCTCCTTGACCAGATCCAGGCCCTCCGCTGGGT...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCACCGGAGGCGGCACTTTaGTGGTGGTGGACGTATAGT +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPPEAAL*WWWTYS
Trigger: ACTATACGTCCACCACCACCAAAGTGCCGCCTCCGG...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCTGTAGGCAGGTGAGATaGCTGGCCGCTTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPCRQVR*LAAWCS
Trigger: GGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACA...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCACCAGGCCAATGCTGTTaGCCTTTGGGGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPPGQCC*PLGKQV
Trigger: GACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGG...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCACCAGACCGGCAGCATaGCTTCGGGCACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLATRPAA*LRAQLC
Trigger: ACACAGCTGTGCCCGAAGTCATGCTGCCGGTCTGGT...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCCATTGGGCCTGCGGGTaGTGTGGGAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSHWACG*CGSCGW
Trigger: CCACCCACAGCTCCCACATCACCCGCAGGCCCAATG...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGCATTGGGCCTGCGGGTaGTGTGGGAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVHWACG*CGSCGW
Trigger: CCACCCACAGCTCCCACATCACCCGCAGGCCCAATG...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCACCTGGGCATTCTCGTTaGTGTAGGCAGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPPGHSR*CRQVRW
Trigger: CCATCTCACCTGCCTACAGCAACGAGAATGCCCAGG...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPVCVCV*MCSWIW
Trigger: CCAGATCCAGGAACACATGCACACACACACACACAC...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGTGTGTGTGTGTGTGTaGATGTGTTCCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPVCVCV*MCSWIW
Trigger: CCAGATCCAGGAACACATGCACACACACACACACAC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTTTGTGCAGGTGGATCTaGTGTAGGGTGTGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPLCRWI*CRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAA...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCTGCCAACCGTGGGCTTaGGGCTCAGGGACAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSCQPWA*GSGTAR
Trigger: CCTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCA...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGCACGTGGTAGCGGGCTaGCTGGATGTCCTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGREHVVAG*LDVLLY
Trigger: GTAGAGCAGGACATCCAGCCAGCCCGCTACCACGTG...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGGGGGACCGGCTTGTTaGGATCCCCAGTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGGGPAC*DPQSWQ
Trigger: TTGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCATGATCTCGGACCCTTaGTTTCAGCCCGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPMISDP*FQPDVK
Trigger: CTTCACATCGGGCTGAAACCAAGGGTCCGAGATCAT...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCATGATCTCGGACCCTTaGTTTCAGCCCGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPMISDP*FQPDVK
Trigger: CTTCACATCGGGCTGAAACCAAGGGTCCGAGATCAT...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCCCGGAGGCGGCACTTTaGTGGTGGTGGACGTATAGT +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPPEAAL*WWWTYS
Trigger: ACTATACGTCCACCACCACCAAAGTGCCGCCTCCGG...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTGTGGGAGCTGTGGGTaGTATCCGGAGGCGGCACTT +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGCGSCG*YPEAAL
Trigger: AAGTGCCGCCTCCGGATACCACCCACAGCTCCCACA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCAGATGGCTGGCCGCTTaGTGCTCCAGGTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPRWLAA*CSRSCH
Trigger: ATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCT...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTGTAGGCAGGTGAGATaGCTGGCCGCTTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGCRQVR*LAAWCS
Trigger: GGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCCCGGCCTCACACTCGTaGTGGGTGGGGCCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTPASHS*WVGPSC
Trigger: ACAACTGGGCCCCACCCACCACGAGTGTGAGGCCGG...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGCCGGCCTCACACTCGTaGTGGGTGGGGCCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVPASHS*WVGPSC
Trigger: ACAACTGGGCCCCACCCACCACGAGTGTGAGGCCGG...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGTTGGGGGTCATGAGTaGGATGTCATCCGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAVGGHE*DVIRGA
Trigger: CGCTCCCCGGATGACATCCCACTCATGACCCCCAAC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGGCTGTGCTCTGAGTTaGAGCTATACCCGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPGCALS*SYTRVV
Trigger: CACTACCCGGGTATAGCTCCAACTCAGAGCACAGCC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAGGCTGTGCTCTGAGTTaGAGCTATACCCGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPGCALS*SYTRVV
Trigger: CACTACCCGGGTATAGCTCCAACTCAGAGCACAGCC...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTAATGCTGTTGGCCTTTaGGGAAGCAGGTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPNAVGL*GSRSPC
Trigger: GCAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 72 bp AATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTaGGCCTTTGGGGAAGCAGGTCACCCTGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NLRSPGLARPML*AFGEAGHPAGS
Trigger: AGAGCCTGCAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTCCCAAAGTGAGTGTTaGCTGTGGGTGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLASQSEC*LWVLGP
Trigger: AGGCCCCAGCACCCACAGTCAACACTCACTTTGGGA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAACCAAGCAGGCTTCATaGGGCTCTGGCAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPTKQAS*GSGSDD
Trigger: ATCATCACTGCCAGAGCCTCATGAAGCCTGCTTGGT...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGAGATTGGCTGTGCTCTaGGTTGGAGCTATACCCGGG +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKRLAVL*VGAIPG
Trigger: CCCGGGTATAGCTCCAACTCAGAGCACAGCCAATCT...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGAGAGACCTTCGGGCCTaGAGCCCTCCCTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLRDLRA*SPPFQR
Trigger: CCTCTGGAAGGGAGGGCTTCAGGCCCGAAGGTCTCT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCCTTGGTCTGATTGTGTaGGCACTGGGGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPLGLIV*ALGVLE
Trigger: CTCTAGGACCCCCAGTGCTCACACAATCAGACCAAG...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATCTTGTTCCTTGGTCTaGTTGTGTGAGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPSCSLV*LCEHWG
Trigger: CCCCCAGTGCTCACACAATCAGACCAAGGAACAAGA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAGCCGATCGGGGGAGCTaGGTAGGGCACCCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLADRGS*VGHPQV
Trigger: TACCTGGGGGTGCCCTACGCAGCTCCCCCGATCGGC...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGAGGCTGACGCAGGATaGACCAATGCCCGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAEADAG*TNARAK
Trigger: TTTGGCTCGGGCATTGGTGCATCCTGCGTCAGCCTC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTCCTTGGCACTCTTTTaGCGAAGACAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPSLALF*RRQSTI
Trigger: TATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGA...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGCTGTAGGGTGTGGGTaGGTGCGTATACATATATGT +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPAVGCG*VRIHIC
Trigger: ACATATATGTATACGCACGCACCCACACCCTACAGC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGGAGTTGGTCGGTGGTaGAGTTCCAAGAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAGVGRW*SSKRGR
Trigger: TCGGCCTCTCTTGGAACTGCACCACCGACCAACTCC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGTCTGGCCAGGCCAATaGTGTTGGCCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAVWPGQ*CWPLGK
Trigger: CTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGAC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGGCCCCAGGATCTCACTaGGCAGTGGTACTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVAPGSH*AVVLGH
Trigger: GTGCCCGAGTACCACTGCCCAGTGAGATCCTGGGGC...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGTTCTGGGGGCACACTaGGGGAAAGTGTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGVLGAH*GKVCGV
Trigger: AACGCCACACACTTTCCCCCAGTGTGCCCCCAGAAC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTCGGGCACAGCTGTGTaGATGTTCTGGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLASGTAV*MFWGHT
Trigger: AGTGTGCCCCCAGAACATCCACACAGCTGTGCCCGA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGACCCAGCGGAGGGCCTaGATCTGGTCAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLTQRRA*IWSRSP
Trigger: TGGGCTCCTTGACCAGATCCAGGCCCTCCGCTGGGT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATTGAGACCCTCGCCCTaGTTGACACCTAGCATGATG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPLRPSP*LTPSMM
Trigger: CATCATGCTAGGTGTCAACCAGGGCGAGGGTCTCAA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGGCACTTTGGTGGTGGTaGACGTATAGTGGAACATGT +
Preference number: 4 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLALWWW*TYSGTC
Trigger: ACATGTTCCACTATACGTCCACCACCACCAAAGTGC...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGCACTTTGGTGGTGGTaGACGTATAGTGGAACATGT +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPALWWW*TYSGTC
Trigger: ACATGTTCCACTATACGTCCACCACCACCAAAGTGC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGGAGGCGGCACTTTGGTaGTGGTGGACGTATAGTGGA +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKEAALW*WWTYSG
Trigger: TCCACTATACGTCCACCACCACCAAAGTGCCGCCTC...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGTGTGGGAGCTGTGGGTaGTATCCGGAGGCGGCACTT +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGCGSCG*YPEAAL
Trigger: AAGTGCCGCCTCCGGATACCACCCACAGCTCCCACA...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCGTTCTCCACCAGGAGTaGCCCTGCATCCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSVLHQE*PCILVP
Trigger: GGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAAC...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTGCCAGCTCCTCCTCTaGAGCAGCTCCCAACTCCGG +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLCQLLL*SSSQLR
Trigger: CCGGAGTTGGGAGCTGCTCCAGAGGAGGAGCTGGCA...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGTGCCAGCTCCTCCTCTaGAGCAGCTCCCAACTCCGG +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVCQLLL*SSSQLR
Trigger: CCGGAGTTGGGAGCTGCTCCAGAGGAGGAGCTGGCA...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCTGCCAGCTCCTCCTCTaGAGCAGCTCCCAACTCCGG +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSCQLLL*SSSQLR
Trigger: CCGGAGTTGGGAGCTGCTCCAGAGGAGGAGCTGGCA...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCCACACTCGTGGTGGGTaGGGCCCAGTTGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAHTRGG*GPVVML
Trigger: CAGCATTACAACTGGGCCCCACCCACCACGAGTGTG...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTTCAGCTGCTGTTTCATaGGTCCTCGGTTTACCGAGG +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPSAAVS*VLGLPR
Trigger: CCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGA...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCTCAGATTCAGGGAGCTaGCTTCAGCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPSDSGS*LQLLFH
Trigger: ATGAAACAGCAGCTGAAGCCAGCTCCCTGAATCTGA...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAGGACACAGAGAGAGTTaGAGATCTCTCCCCTACGAC +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPGHRES*RSLPYD
Trigger: GTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCC...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGGACACAGAGAGAGTTaGAGATCTCTCCCCTACGAC +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPGHRES*RSLPYD
Trigger: GTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCACCAAGCAGGCTTCATaGGGCTCTGGCAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPTKQAS*GSGSDD
Trigger: ATCATCACTGCCAGAGCCTCATGAAGCCTGCTTGGT...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGGGTACTTCATCCCCATaGGCTGCATCTGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKGTSSP*AASDQA
Trigger: TGCTTGGTCAGATGCAGCTCATGGGGATGAAGTACC...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGAGTCGGGCAATGCAGTaGGGCGCAGCGTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLSRAMQ*GAACHG
Trigger: CCCATGACACGCTGCGCCTCACTGCATTGCCCGACT...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACCCGGGTAGTGGAGTGTaGGTGGGGCAGCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYPGSGV*VGQPGT
Trigger: AGTACCGGGCTGCCCCACTCACACTCCACTACCCGG...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTGTTCCCCGGGCTGCTaGAAGCGACTGAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYCSPGC*KRLNRA
Trigger: GGCCCGGTTCAGTCGCTTGCAGCAGCCCGGGGAACA...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGCCTGTTCCCCGGGCTaGTGCAAGCGACTGAACCGG +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYACSPG*CKRLNR
Trigger: CCGGTTCAGTCGCTTGCAGCAGCCCGGGGAACAGGC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCAGTGTTGACTGTGGGTaGTGGGGCCTGGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTSVDCG*WGLGTG
Trigger: GCCAGTACCCAGGCCCCAGCACCCACAGTCAACACT...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAAACTGGCGAGGATGCTaGCATCAATCATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPNWRGC*HQSCCL
Trigger: CAGGCAACATGATTGATGGCAGCATCCTCGCCAGTT...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCACCAGGAGTGGCCCTaGATCCTGGTCCCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLHQEWP*ILVPVP
Trigger: TGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTG...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGGGTGTAGTCGGGCAATaGAGTGAGGCGCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLGVVGQ*SEAQRV
Trigger: GACACGCTGCGCCTCACTGCATTGCCCGACTACACC...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCGGTGTAGTCGGGCAATaGAGTGAGGCGCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTGVVGQ*SEAQRV
Trigger: GACACGCTGCGCCTCACTGCATTGCCCGACTACACC...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGGTACTGTTGAACCCTaGGGCAAAGGTGTTATAGGG +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPGTVEP*GKGVIG
Trigger: CCCTATAACACCTTTGCCGCAGGGTTCAACAGTACC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCTGGAGATTGGCTGTaGTCTGAGTTGGAGCTATAC +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPPGDWL*SELELY
Trigger: GTATAGCTCCAACTCAGAGCACAGCCAATCTCCAGG...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCTCCACCCCATGGTCTTaGTTAAATCTGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPSTPWS*LNLFPS
Trigger: GGAAGGAAACAGATTTAAGCAAGACCATGGGGTGGA...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCTGTCTGCCAGCAGGCTaGTGTACTTCACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPCLPAG*CTSLVG
Trigger: ACCAACCAGTGAAGTACACCAGCCTGCTGGCAGACA...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGTGTCTGCCAGCAGGCTaGTGTACTTCACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKCLPAG*CTSLVG
Trigger: ACCAACCAGTGAAGTACACCAGCCTGCTGGCAGACA...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGGCTCTACCAGCTCCTTaGCACTCTTTTGCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKALPAP*HSFAED
Trigger: GTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGC...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCCACGTGGTAGCGGGCTaGCTGGATGTCCTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTHVVAG*LDVLLY
Trigger: GTAGAGCAGGACATCCAGCCAGCCCGCTACCACGTG...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGGGGGGACCGGCTTGTTaGGATCCCCAGTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVGGPAC*DPQSWQ
Trigger: TTGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCC...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTATGATCTCGGACCCTTaGTTTCAGCCCGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPMISDP*FQPDVK
Trigger: CTTCACATCGGGCTGAAACCAAGGGTCCGAGATCAT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGAGGCGGCACTTTGGTaGTGGTGGACGTATAGTGGA +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAEAALW*WWTYSG
Trigger: TCCACTATACGTCCACCACCACCAAAGTGCCGCCTC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGCACACTCGTGGTGGGTaGGGCCCAGTTGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGHTRGG*GPVVML
Trigger: CAGCATTACAACTGGGCCCCACCCACCACGAGTGTG...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGGCCTCACACTCGTGGTaGGTGGGGCCCAGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGASHSW*VGPSCN
Trigger: ATTACAACTGGGCCCCACCCACCACGAGTGTGAGGC...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGGTAGTGGAGTGTGAGTaGGGCAGCCCGGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGVVECE*GSPVLL
Trigger: CAACAGTACCGGGCTGCCCCACTCACACTCCACTAC...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTCCCAAAGTGAGTGTTaGCTGTGGGTGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLSQSEC*LWVLGP
Trigger: AGGCCCCAGCACCCACAGTCAACACTCACTTTGGGA...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTACCAGACCGGCAGCATaGCTTCGGGCACAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANATRPAA*LRAQLC
Trigger: ACACAGCTGTGCCCGAAGTCATGCTGCCGGTCTGGT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGTTGCCCTTGGCAGCCTaGTCTCCAGTACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGRELPLAA*SPVLRK
Trigger: TTTCCTGAGTACTGGAGATCAGGCTGCCAAGGGCAA...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGAAAAGTCCCTCTGAGTaGTGTGACAACGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKKSPSE*CDNVRR
Trigger: CCTCCTCACGTTGTCACATCACTCAGAGGGACTTTT...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGCAGCCCGGTACTGTTaGACCCTGCGGCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLAARYC*TLRQRC
Trigger: ACACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACAGAGACCTTCGGGCCTaGAGCCCTCCCTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYRDLRA*SPPFQR
Trigger: CCTCTGGAAGGGAGGGCTTCAGGCCCGAAGGTCTCT...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTCTTGTTCCTTGGTCTaGTTGTGTGAGCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGSCSLV*LCEHWG
Trigger: CCCCCAGTGCTCACACAATCAGACCAAGGAACAAGA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGGAGGCTGACGCAGGATaGACCAATGCCCGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLEADAG*TNARAK
Trigger: TTTGGCTCGGGCATTGGTGCATCCTGCGTCAGCCTC...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGACAGCCCACTTTGTCTaGCAGCAGGCTGGTGTACTT +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGRETAHFV*QQAGVL
Trigger: AAGTACACCAGCCTGCTGGCAGACAAAGTGGGCTGT...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACCACCAGGAGTGGCCCTaGATCCTGGTCCCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYHQEWP*ILVPVP
Trigger: TGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTG...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGGTGTAGTCGGGCAATaGAGTGAGGCGCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLGVVGQ*SEAQRV
Trigger: GACACGCTGCGCCTCACTGCATTGCCCGACTACACC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGGGAGCTGGCTTCAGCTaGTGTTTCATGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLGAGFS*CFMGPR
Trigger: CCGAGGACCCATGAAACAGCAGCTGAAGCCAGCTCC...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCGGAGTTGGTCGGTGGTaGAGTTCCAAGAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSGVGRW*SSKRGR
Trigger: TCGGCCTCTCTTGGAACTGCACCACCGACCAACTCC...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGTCGGGCACAGCTGTGTaGATGTTCTGGGGGCACACT +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVSGTAV*MFWGHT
Trigger: AGTGTGCCCCCAGAACATCCACACAGCTGTGCCCGA...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGCTCTACCAGCTCCTTaGCACTCTTTTGCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGALPAP*HSFAED
Trigger: GTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTCACGTGGTAGCGGGCTaGCTGGATGTCCTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAHVVAG*LDVLLY
Trigger: GTAGAGCAGGACATCCAGCCAGCCCGCTACCACGTG...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGTTGAGACCCTCGCCCTaGTTGACACCTAGCATGATG +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGRELRPSP*LTPSMM
Trigger: CATCATGCTAGGTGTCAACCAGGGCGAGGGTCTCAA...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGAGGGCTCCACCCACTaGTGGTCAGTGAAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAEGSTH*WSVKSA
Trigger: GGCACTCTTCACTGACCACCAGTGGGTGGAGCCCTC...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGAGGGCTCCACCCACTaGTGGTCAGTGAAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLEGSTH*WSVKSA
Trigger: GGCACTCTTCACTGACCACCAGTGGGTGGAGCCCTC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATGCAGGTTGTATAGGTaGGGCACCAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPCRLYR*GTRCFQ
Trigger: TTGGAAACATCTGGTGCCCCACCTATACAACCTGCA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGCCGGAGGCGGCACTTTaGTGGTGGTGGACGTATAGT +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVPEAAL*WWWTYS
Trigger: ACTATACGTCCACCACCACCAAAGTGCCGCCTCCGG...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTGTGGGAGCTGTGGGTaGTATCCGGAGGCGGCACTT +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANACGSCG*YPEAAL
Trigger: AAGTGCCGCCTCCGGATACCACCCACAGCTCCCACA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGTTCTCCACCAGGAGTaGCCCTGCATCCTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANVLHQE*PCILVP
Trigger: GGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAAC...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGGTAGTGGAGTGTGAGTaGGGCAGCCCGGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLVVECE*GSPVLL
Trigger: CAACAGTACCGGGCTGCCCCACTCACACTCCACTAC...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGGGCTGTGCTCTGAGTTaGAGCTATACCCGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGGCALS*SYTRVV
Trigger: CACTACCCGGGTATAGCTCCAACTCAGAGCACAGCC...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTATCTGCTGTAGGGTGTaGGTGCGTGCGTATACATAT +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPICCRV*VRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGAT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPLCLCR*ICCRVW
Trigger: CCACACCCTACAGCAGATCCACCTGCACAAACATAG...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTCAGCTGCTGTTTCATaGGTCCTCGGTTTACCGAGG +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGSAAVS*VLGLPR
Trigger: CCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGTCAGCTGCTGTTTCATaGGTCCTCGGTTTACCGAGG +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGRESAAVS*VLGLPR
Trigger: CCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGA...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTAAAAAGACCAAGTCCTaGGGAGGAAGAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPKKTKS*GGRAIL
Trigger: CAGGATAGCTCTTCCTCCCCAGGACTTGGTCTTTTT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGAACCCAGATCAGACCTaGGGGCCCAATAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGRENPDQT*GPNSDV
Trigger: CACATCACTATTGGGCCCCCAGGTCTGATCTGGGTT...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCTTGAACCTCAAAACTaGGCTCTCGAGGGACACCTA +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGLEPQN*ALEGHL
Trigger: TAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTCCCAAAGTGAGTGTTaGCTGTGGGTGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLSQSEC*LWVLGP
Trigger: AGGCCCCAGCACCCACAGTCAACACTCACTTTGGGA...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCCTTAGCTTCCCAAAGTaGGTGTTGACTGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLALSFPK*VLTVGA
Trigger: AGCACCCACAGTCAACACTCACTTTGGGAAGCTAAG...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCAGATTGGCTGTGCTCTaGGTTGGAGCTATACCCGGG +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSRLAVL*VGAIPG
Trigger: CCCGGGTATAGCTCCAACTCAGAGCACAGCCAATCT...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCTCCTTGGCACTCTTTTaGCGAAGACAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPSLALF*RRQSTI
Trigger: TATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGA...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCTGGCTGGATGTCCTaGTCTACCAGCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAAGWMS*STSSLA
Trigger: TGCCAAGGAGCTGGTAGAGCAGGACATCCAGCCAGC...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTATGGCTGGCCGCTTGGTaGTCCAGGTCTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLWLAAW*SRSCHW
Trigger: CCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCA...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCTTGTGCAGGTGGATCTaGTGTAGGGTGTGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSLCRWI*CRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAA...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGCTGGTGTACTTCACTaGTTGGTAGTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGAGVLH*LVVHSP
Trigger: TGGGCTGTGAACTACCAACCAGTGAAGTACACCAGC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCTGCAGGTTGTATAGGTaGGGCACCAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPCRLYR*GTRCFQ
Trigger: TTGGAAACATCTGGTGCCCCACCTATACAACCTGCA...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATTGTAGGCAGGTGAGATaGCTGGCCGCTTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANCRQVR*LAAWCS
Trigger: GGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACA...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGCCTCACACTCGTGGTaGGTGGGGCCCAGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLASHSW*VGPSCN
Trigger: ATTACAACTGGGCCCCACCCACCACGAGTGTGAGGC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAGTTGGGGGTCATGAGTaGGATGTCATCCGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLVGGHE*DVIRGA
Trigger: CGCTCCCCGGATGACATCCCACTCATGACCCCCAAC...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGLCLCR*ICCRVW
Trigger: CCACACCCTACAGCAGATCCACCTGCACAAACATAG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGTCAGATTCAGGGAGCTaGCTTCAGCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKSDSGS*LQLLFH
Trigger: ATGAAACAGCAGCTGAAGCCAGCTCCCTGAATCTGA...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLSGVGR*CSSKRG
Trigger: GCCTCTCTTGGAACTGCACCACCGACCAACTCCAGA...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGAATGCTGTTGGCCTTTaGGGAAGCAGGTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVNAVGL*GSRSPC
Trigger: GCAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATT...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 72 bp TTGTACATGCGGGTGCATGTCCACATCTGTCTATGTTaGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LYMRVHVHICLC*CRWICCRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAAACATAGACAGATGTGGACATGCACCCGCATGTACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGATGGCCACACTGACTTaGACCTCAAAACTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGMATLT*TSKLSS
Trigger: AGAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCAT...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGCTTAGCTTCCCAAAGTaGGTGTTGACTGTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGLSFPK*VLTVGA
Trigger: AGCACCCACAGTCAACACTCACTTTGGGAAGCTAAG...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCCCATGAGCTGCATCTaGCCAAGCAGGCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLPMSCI*PSRLHE
Trigger: CTCATGAAGCCTGCTTGGTCAGATGCAGCTCATGGG...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTCCCATGAGCTGCATCTaGCCAAGCAGGCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAPMSCI*PSRLHE
Trigger: CTCATGAAGCCTGCTTGGTCAGATGCAGCTCATGGG...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCGGTACTTCATCCCCATaGGCTGCATCTGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTGTSSP*AASDQA
Trigger: TGCTTGGTCAGATGCAGCTCATGGGGATGAAGTACC...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTGGCCTTGGTGTGAATaGACTTGGTGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAWPWCE*TWCPGG
Trigger: TCCCCCAGGACACCAAGTTCATTCACACCAAGGCCA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCAGTGTTGACTGTGGGTaGTGGGGCCTGGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSSVDCG*WGLGTG
Trigger: GCCAGTACCCAGGCCCCAGCACCCACAGTCAACACT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGACAGCCCACTTTGTCTaGCAGCAGGCTGGTGTACTT +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVTAHFV*QQAGVL
Trigger: AAGTACACCAGCCTGCTGGCAGACAAAGTGGGCTGT...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGAATAGTCAAAGTCAGTaGCAGAGACACCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKNSQSQ*QRHHPQ
Trigger: CTGAGGATGGTGTCTCTGGCACTGACTTTGACTATT...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKICLCL*RWICCR
Trigger: CCTACAGCAGATCCACCTGCACAAACATAGACAGAT...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATTTTGTACATGCGGGTaGATGTCCACATCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPFCTCG*MSTSVY
Trigger: ATAGACAGATGTGGACATGCACCCGCATGTACAAAA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAGGAGTTGGTCGGTGGTaGAGTTCCAAGAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLGVGRW*SSKRGR
Trigger: TCGGCCTCTCTTGGAACTGCACCACCGACCAACTCC...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGTTCTGGGGGCACACTaGGGGAAAGTGTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYVLGAH*GKVCGV
Trigger: AACGCCACACACTTTCCCCCAGTGTGCCCCCAGAAC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGCTGTGTGGATGTTCTaGGGGCACACTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYAVWMF*GHTGGK
Trigger: CTTTCCCCCAGTGTGCCCCCAGAACATCCACACAGC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCAGAGCAGAGCCACTTTaGATGATGGCTCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLARAEPL*MMALWK
Trigger: TTTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCT...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGTTGAGACCCTCGCCCTaGTTGACACCTAGCATGATG +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVLRPSP*LTPSMM
Trigger: CATCATGCTAGGTGTCAACCAGGGCGAGGGTCTCAA...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCGCGGCACTTTGGTGGTaGTGGACGTATAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTAALWW*WTYSGT
Trigger: TGTTCCACTATACGTCCACCACCACCAAAGTGCCGC...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGCCTCACACTCGTGGTaGGTGGGGCCCAGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYASHSW*VGPSCN
Trigger: ATTACAACTGGGCCCCACCCACCACGAGTGTGAGGC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLSGVGR*CSSKRG
Trigger: GCCTCTCTTGGAACTGCACCACCGACCAACTCCAGA...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTTAGCACTCATGGGTTaGAAAAGCATTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPLALMG*KSICSK
Trigger: TTTGGAACAAATGCTTTTCCAACCCATGAGTGCTAA...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCAATCTGTTTCCTTCCTaGGGGTCTTGTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLANLFPS*GSCSLV
Trigger: GACCAAGGAACAAGACCCCCAGGAAGGAAACAGATT...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCGGACACAGAGAGAGTTaGAGATCTCTCCCCTACGAC +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSGHRES*RSLPYD
Trigger: GTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCC...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATCCAGGCCAATGCTGTTaGCCTTTGGGGAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANPGQCC*PLGKQV
Trigger: GACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGG...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGAACCCAGATCAGACCTaGGGGCCCAATAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVNPDQT*GPNSDV
Trigger: CACATCACTATTGGGCCCCCAGGTCTGATCTGGGTT...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCCTTGAACCTCAAAACTaGGCTCTCGAGGGACACCTA +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSLEPQN*ALEGHL
Trigger: TAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAG...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGACCAAGCAGGCTTCATaGGGCTCTGGCAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLTKQAS*GSGSDD
Trigger: ATCATCACTGCCAGAGCCTCATGAAGCCTGCTTGGT...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTACCCATGAGCTGCATCTaGCCAAGCAGGCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLPMSCI*PSRLHE
Trigger: CTCATGAAGCCTGCTTGGTCAGATGCAGCTCATGGG...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGTACTTCATCCCCATaGGCTGCATCTGACCAAGCA +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAGTSSP*AASDQA
Trigger: TGCTTGGTCAGATGCAGCTCATGGGGATGAAGTACC...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACCTTGGTCTGATTGTGTaGGCACTGGGGGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYLGLIV*ALGVLE
Trigger: CTCTAGGACCCCCAGTGCTCACACAATCAGACCAAG...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCAAAAACACCGCCTTTTTaGAAGAGAAATGACAGACAC +
Preference number: 4 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPKTPPF*KRNDRH
Trigger: GTGTCTGTCATTTCTCTTTCAAAAAGGCGGTGTTTT...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTACCTGGGCATTCTCGTTaGTGTAGGCAGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLPGHSR*CRQVRW
Trigger: CCATCTCACCTGCCTACAGCAACGAGAATGCCCAGG...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCGGTACTGTTGAACCCTaGGGCAAAGGTGTTATAGGG +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSGTVEP*GKGVIG
Trigger: CCCTATAACACCTTTGCCGCAGGGTTCAACAGTACC...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTCTGGCCAGGCCAATaGTGTTGGCCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSVWPGQ*CWPLGK
Trigger: CTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGAC...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCGCTGGTGTACTTCACTaGTTGGTAGTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTAGVLH*LVVHSP
Trigger: TGGGCTGTGAACTACCAACCAGTGAAGTACACCAGC...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCGGCACTTTGGTGGTaGTGGACGTATAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAAALWW*WTYSGT
Trigger: TGTTCCACTATACGTCCACCACCACCAAAGTGCCGC...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTGCCGCAGGGGCTCCTaGCGCCGTTTGTCCTTACGG +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFCRRGS*RRLSLR
Trigger: CCGTAAGGACAAACGGCGCCAGGAGCCCCTGCGGCA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCTCTCCTTCCACCCCATaGTCTTGCTTAAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPSPSTP*SCLNLF
Trigger: AAACAGATTTAAGCAAGACCATGGGGTGGAAGGAGA...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACAATGCTGTTGGCCTTTaGGGAAGCAGGTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYNAVGL*GSRSPC
Trigger: GCAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATT...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGAACCCAGATCAGACCTaGGGGCCCAATAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLNPDQT*GPNSDV
Trigger: CACATCACTATTGGGCCCCCAGGTCTGATCTGGGTT...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGATGGCCACACTGACTTaGACCTCAAAACTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLMATLT*TSKLSS
Trigger: AGAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCAT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTATTGCCCTTGGCAGCCTaGTCTCCAGTACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLLPLAA*SPVLRK
Trigger: TTTCCTGAGTACTGGAGATCAGGCTGCCAAGGGCAA...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTAAAAGTCCCTCTGAGTaGTGTGACAACGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAKSPSE*CDNVRR
Trigger: CCTCCTCACGTTGTCACATCACTCAGAGGGACTTTT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCAGAGCCACTTTGGATaGTGGCTCTCTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLQSHFG*WLSGKV
Trigger: GACTTTTCCAGAGAGCCATCATCCAAAGTGGCTCTG...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCATTGGGCCTGCGGGTaGTGTGGGAGCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFHWACG*CGSCGW
Trigger: CCACCCACAGCTCCCACATCACCCGCAGGCCCAATG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCCGGGTAGTGGAGTGTaGGTGGGGCAGCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFPGSGV*VGQPGT
Trigger: AGTACCGGGCTGCCCCACTCACACTCCACTACCCGG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCAGATTGGCTGTGCTCTaGGTTGGAGCTATACCCGGG +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSRLAVL*VGAIPG
Trigger: CCCGGGTATAGCTCCAACTCAGAGCACAGCCAATCT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTTGTTCCCCGGGCTGCTaGAAGCGACTGAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFCSPGC*KRLNRA
Trigger: GGCCCGGTTCAGTCGCTTGCAGCAGCCCGGGGAACA...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGTGGTCAGTGAAGAGTaGCACCAGTGTTTTACGGCG +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYVVSEE*HQCFTA
Trigger: CGCCGTAAAACACTGGTGGCACTCTTCACTGACCAC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGTGGTCAGTGAAGAGTaGCACCAGTGTTTTACGGCG +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANVVSEE*HQCFTA
Trigger: CGCCGTAAAACACTGGTGGCACTCTTCACTGACCAC...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCGCTGTAGGGTGTGGGTaGGTGCGTATACATATATGT +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTAVGCG*VRIHIC
Trigger: ACATATATGTATACGCACGCACCCACACCCTACAGC...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCTTGTGCAGGTGGATCTaGTGTAGGGTGTGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSLCRWI*CRVWVR
Trigger: ACGCACCCACACCCTACAGCAGATCCACCTGCACAA...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTTGCCAACCGTGGGCTTaGGGCTCAGGGACAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFCQPWA*GSGTAR
Trigger: CCTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCA...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTGCCCCAGGATCTCACTaGGCAGTGGTACTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFAPGSH*AVVLGH
Trigger: GTGCCCGAGTACCACTGCCCAGTGAGATCCTGGGGC...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTTCGGGCGCATTCCTTaGAAATCCGCTTTACATCCT +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTFGRIP*KSALHP
Trigger: AGGATGTAAAGCGGATTTCCAAGGAATGCGCCCGAA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358741.4
CDS-3UTR CCA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTACAAATTTTCTTGTTaGGCTTTCGGGCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGYKFSC*AFGRIP
Trigger: AGGAATGCGCCCGAAAGCCCAACAAGAAAATTTGTA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358741.4
CDS-3UTR CCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGAGAGCAGAGCCACTTTaGATGATGGCTCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLRAEPL*MMALWK
Trigger: TTTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCTGCAGGTTGTATAGGTaGGGCACCAGATGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SPPFQRLLALMGWKSICSCRLYR*GTRCFQ
Trigger: TTGGAAACATCTGGTGCCCCACCTATACAACCTGCA...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCATCTGCTGTAGGGTGTaGGTGCGTGCGTATACATAT +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTICCRV*VRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGAT...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTCTATGTTTGTGCAGGTaGATCTGCTGTAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANALCLCR*ICCRVW
Trigger: CCACACCCTACAGCAGATCCACCTGCACAAACATAG...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTCCCAAGTCTGGAGTTaGTCGGTGGTGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYSQVWS*SVVQFQ
Trigger: TTGGAACTGCACCACCGACCAACTCCAGACTTGGGA...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTATCCCAAGTCTGGAGTTaGTCGGTGGTGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLSQVWS*SVVQFQ
Trigger: TTGGAACTGCACCACCGACCAACTCCAGACTTGGGA...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGGGGGTCTTGTTCCTTaGTCTGATTGTGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLGGLVP*SDCVST
Trigger: AGTGCTCACACAATCAGACCAAGGAACAAGACCCCC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCAATCTGTTTCCTTCCTaGGGGTCTTGTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTNLFPS*GSCSLV
Trigger: GACCAAGGAACAAGACCCCCAGGAAGGAAACAGATT...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTCTCCTTCCACCCCATaGTCTTGCTTAAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLASPSTP*SCLNLF
Trigger: AAACAGATTTAAGCAAGACCATGGGGTGGAAGGAGA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATAAAAGTCCCTCTGAGTaGTGTGACAACGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANKSPSE*CDNVRR
Trigger: CCTCCTCACGTTGTCACATCACTCAGAGGGACTTTT...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATCAGAGCCACTTTGGATaGTGGCTCTCTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANQSHFG*WLSGKV
Trigger: GACTTTTCCAGAGAGCCATCATCCAAAGTGGCTCTG...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATAACTGGCGAGGATGCTaGCATCAATCATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANNWRGC*HQSCCL
Trigger: CAGGCAACATGATTGATGGCAGCATCCTCGCCAGTT...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCACAGCCCACTTTGTCTaGCAGCAGGCTGGTGTACTT +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSTAHFV*QQAGVL
Trigger: AAGTACACCAGCCTGCTGGCAGACAAAGTGGGCTGT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGAATAGTCAAAGTCAGTaGCAGAGACACCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLNSQSQ*QRHHPQ
Trigger: CTGAGGATGGTGTCTCTGGCACTGACTTTGACTATT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTGGTCAGTGAAGAGTaGCACCAGTGTTTTACGGCG +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSVVSEE*HQCFTA
Trigger: CGCCGTAAAACACTGGTGGCACTCTTCACTGACCAC...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTGGCTGGCCGCTTGGTaGTCCAGGTCTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFWLAAW*SRSCHW
Trigger: CCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGGTACTGTTGAACCCTaGGGCAAAGGTGTTATAGGG +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYGTVEP*GKGVIG
Trigger: CCCTATAACACCTTTGCCGCAGGGTTCAACAGTACC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATCCTGGAGATTGGCTGTaGTCTGAGTTGGAGCTATAC +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANPGDWL*SELELY
Trigger: GTATAGCTCCAACTCAGAGCACAGCCAATCTCCAGG...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTCCACCCCATGGTCTTaGTTAAATCTGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLSTPWS*LNLFPS
Trigger: GGAAGGAAACAGATTTAAGCAAGACCATGGGGTGGA...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTCCACCCCATGGTCTTaGTTAAATCTGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTSTPWS*LNLFPS
Trigger: GGAAGGAAACAGATTTAAGCAAGACCATGGGGTGGA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCTGGGGGAAAGTGTGTaGCGTTCCGGATGCCCGACC +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFLGESV*RSGCPT
Trigger: GGTCGGGCATCCGGAACGCCACACACTTTCCCCCAG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTAGAGCAGAGCCACTTTaGATGATGGCTCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANARAEPL*MMALWK
Trigger: TTTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGCTGGTGTACTTCACTaGTTGGTAGTTCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYAGVLH*LVVHSP
Trigger: TGGGCTGTGAACTACCAACCAGTGAAGTACACCAGC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGCTCTACCAGCTCCTTaGCACTCTTTTGCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSALPAP*HSFAED
Trigger: GTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGC...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGATCTGCTGTAGGGTGTaGGTGCGTGCGTATACATAT +
Preference number: 4 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLICCRV*VRAYTY
Trigger: ATATGTATACGCACGCACCCACACCCTACAGCAGAT...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTCAGATTCAGGGAGCTaGCTTCAGCTGCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANASDSGS*LQLLFH
Trigger: ATGAAACAGCAGCTGAAGCCAGCTCCCTGAATCTGA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAGGGGGTCTTGTTCCTTaGTCTGATTGTGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLGGLVP*SDCVST
Trigger: AGTGCTCACACAATCAGACCAAGGAACAAGACCCCC...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACAAATCTAAGGTCACCTaGTCTGGCCAGGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYKSKVT*SGQANA
Trigger: AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTT...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAAAACACCGCCTTTTTaGAAGAGAAATGACAGACAC +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGKTPPF*KRNDRH
Trigger: GTGTCTGTCATTTCTCTTTCAAAAAGGCGGTGTTTT...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTGCTGGCTGGATGTCCTaGTCTACCAGCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFAGWMS*STSSLA
Trigger: TGCCAAGGAGCTGGTAGAGCAGGACATCCAGCCAGC...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCCCTGGAGATTGGCTGTaGTCTGAGTTGGAGCTATAC +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSPGDWL*SELELY
Trigger: GTATAGCTCCAACTCAGAGCACAGCCAATCTCCAGG...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTAGGGTGTGGGTaGGTGCGTATACATATATGT +
Preference number: 4 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANAVGCG*VRIHIC
Trigger: ACATATATGTATACGCACGCACCCACACCCTACAGC...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTGGAGCTGGCTTCAGCTaGTGTTTCATGGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFGAGFS*CFMGPR
Trigger: CCGAGGACCCATGAAACAGCAGCTGAAGCCAGCTCC...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGAGGAAGAGCTATCCTaGTCTTTAAAGCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAEEELS*SLKLPS
Trigger: ACTTGGGAGCTTTAAAGAGCAGGATAGCTCTTCCTC...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTGCTGTGTGGATGTTCTaGGGGCACACTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFAVWMF*GHTGGK
Trigger: CTTTCCCCCAGTGTGCCCCCAGAACATCCACACAGC...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTAGATGGCTGGCCGCTTaGTGCTCCAGGTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFRWLAA*CSRSCH
Trigger: ATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCT...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTAGCACTCATGGGTTaGAAAAGCATTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RCSPNLRSPGLARPMLLALALMG*KSICSK
Trigger: TTTGGAACAAATGCTTTTCCAACCCATGAGTGCTAA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACAATCTGTTTCCTTCCTaGGGGTCTTGTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYNLFPS*GSCSLV
Trigger: GACCAAGGAACAAGACCCCCAGGAAGGAAACAGATT...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCAAATCTAAGGTCACCTaGTCTGGCCAGGCCAATGCT +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSKSKVT*SGQANA
Trigger: AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGAAAGGACAAACTCCATaGGTTTCCGTTAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: CLRVCVCVCACVPGSGREKGQTP*VSVSVL
Trigger: TAAAACACTAACGGAAACCCATGGAGTTTGTCCTTT...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCATGGCCACACTGACTTaGACCTCAAAACTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSMATLT*TSKLSS
Trigger: AGAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCAT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCAAAACACCGCCTTTTTaGAAGAGAAATGACAGACAC +
Preference number: 4 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTKTPPF*KRNDRH
Trigger: GTGTCTGTCATTTCTCTTTCAAAAAGGCGGTGTTTT...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCTCCTTGGCACTCTTTTaGCGAAGACAGTCCACCATA +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSSLALF*RRQSTI
Trigger: TATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGA...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAATCTGTCTATGTTTGTaGAGGTGGATCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLICLCL*RWICCR
Trigger: CCTACAGCAGATCCACCTGCACAAACATAGACAGAT...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTTTTGTACATGCGGGTaGATGTCCACATCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAFCTCG*MSTSVY
Trigger: ATAGACAGATGTGGACATGCACCCGCATGTACAAAA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGGATTGTCCACAAAATTaGAGACGGAATAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGDCPQN*RRNSQS
Trigger: ACTTTGACTATTCCGTCTCCAATTTTGTGGACAATC...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCACACTCGTGGTGGGTaGGGCCCAGTTGTAATGCTG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFHTRGG*GPVVML
Trigger: CAGCATTACAACTGGGCCCCACCCACCACGAGTGTG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTGTAGTGGAGTGTGAGTaGGGCAGCCCGGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFVVECE*GSPVLL
Trigger: CAACAGTACCGGGCTGCCCCACTCACACTCCACTAC...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCCCCAGGAGTGTCTGTaGTCAGATTCAGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFPQECL*SDSGSW
Trigger: CCAGCTCCCTGAATCTGACCACAGACACTCCTGGGG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTGTCTGCCAGCAGGCTaGTGTACTTCACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFCLPAG*CTSLVG
Trigger: ACCAACCAGTGAAGTACACCAGCCTGCTGGCAGACA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGGATTGTCCACAAAATTaGAGACGGAATAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVDCPQN*RRNSQS
Trigger: ACTTTGACTATTCCGTCTCCAATTTTGTGGACAATC...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTTCTGGAGTTGGTCGGTaGTGCAGTTCCAAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFSGVGR*CSSKRG
Trigger: GCCTCTCTTGGAACTGCACCACCGACCAACTCCAGA...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTCCCAAGTCTGGAGTTaGTCGGTGGTGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFSQVWS*SVVQFQ
Trigger: TTGGAACTGCACCACCGACCAACTCCAGACTTGGGA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGAAAGGACAAACTCCATaGGTTTCCGTTAGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLKGQTP*VSVSVL
Trigger: TAAAACACTAACGGAAACCCATGGAGTTTGTCCTTT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTTTGCCCTTGGCAGCCTaGTCTCCAGTACTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFLPLAA*SPVLRK
Trigger: TTTCCTGAGTACTGGAGATCAGGCTGCCAAGGGCAA...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR TCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTCAGAGCCACTTTGGATaGTGGCTCTCTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFQSHFG*WLSGKV
Trigger: GACTTTTCCAGAGAGCCATCATCCAAAGTGGCTCTG...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTGCGGCACTTTGGTGGTaGTGGACGTATAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFAALWW*WTYSGT
Trigger: TGTTCCACTATACGTCCACCACCACCAAAGTGCCGC...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTAACTGGCGAGGATGCTaGCATCAATCATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFNWRGC*HQSCCL
Trigger: CAGGCAACATGATTGATGGCAGCATCCTCGCCAGTT...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR GCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTAATAGTCAAAGTCAGTaGCAGAGACACCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFNSQSQ*QRHHPQ
Trigger: CTGAGGATGGTGTCTCTGGCACTGACTTTGACTATT...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTGCACTTTGGTGGTGGTaGACGTATAGTGGAACATGT +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFALWWW*TYSGTC
Trigger: ACATGTTCCACTATACGTCCACCACCACCAAAGTGC...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTAAAAAGACCAAGTCCTaGGGAGGAAGAGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFKKTKS*GGRAIL
Trigger: CAGGATAGCTCTTCCTCCCCAGGACTTGGTCTTTTT...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 72 bp AAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTaGTACATGCGGGTGCATGTCCACATCTGTCTATGT +
Preference number: 4 (lower is better)
Translates to: KGLFRFTSVFVF*YMRVHVHICLC
Trigger: ACATAGACAGATGTGGACATGCACCCGCATGTACAAAAACACAAATACGGAAGTAAACCTGAACAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
3UTR CAA 72 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTaGTTCAGGTTTACTTCCGTATTTGTGTTTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LPRTHLRPHLKG*FRFTSVFVFLY
Trigger: GTACAAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTAGCACTCATGGGTTaGAAAAGCATTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFLALMG*KSICSK
Trigger: TTTGGAACAAATGCTTTTCCAACCCATGAGTGCTAA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CCA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTGATTGTCCACAAAATTaGAGACGGAATAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SASPFKGFVQVYFRICVFDCPQN*RRNSQS
Trigger: ACTTTGACTATTCCGTCTCCAATTTTGTGGACAATC...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS CCA 90 bp GCGAGGGCGGGCCAAGCCGCAGCCACATGTTCCGGGCAGGGGGACTaGCAGGAGAGGCAGACTCCAGGGTCACAGCATCAGCCCAATAGG +
Preference number: 5 (lower is better)
Translates to: ARAGQAAATCSGQGD*QERQTPGSQHQPNR
Trigger: CCTATTGGGCTGATGCTGTGACCCTGGAGTCTGCCTCTCCTGCCAGTCCCCCTGCCCGGAACATGTGGCTGCGGCTTGGCCCGCCCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS TCA 90 bp TGGCTGGCCGCTTGGTGCTCCAGGTCTTGCCATTGGGCCTGCGGGTaGTGTGGGAGCTGTGGGTGGTATCCGGAGGCGGCACTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: WLAAWCSRSCHWACG*CGSCGWYPEAALWW
Trigger: CCACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCCACATCACCCGCAGGCCCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS-3UTR CAA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCCTGCCAACCGTGGGCTaGGGGCTCAGGGACAGCGAG +
Preference number: 5 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPLPTVG*GLRDSE
Trigger: CTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCAG...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS GCA 90 bp GCCCTGCATCCTGGTCCCCGTTCCAGGACCCCTGGGCATTCTCGTTaGTGTAGGCAGGTGAGATGGCTGGCCGCTTGGTGCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ALHPGPRSRTPGHSR*CRQVRWLAAWCSRS
Trigger: AGACCTGGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAACGAGAATGCCCAGGGGTCCTGGAACGGGGACCAGGATGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 90 bp CGTTCCAGGACCCCTGGGCATTCTCGTTGCTGTAGGCAGGTGAGATaGCTGGCCGCTTGGTGCTCCAGGTCTTGCCATTGGGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: RSRTPGHSRCCRQVR*LAAWCSRSCHWACG
Trigger: CCCGCAGGCCCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAACGAGAATGCCCAGGGGTCCTGGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS TCA 90 bp GTCCCCGTTCCAGGACCCCTGGGCATTCTCGTTGCTGTAGGCAGGTaGGATGGCTGGCCGCTTGGTGCTCCAGGTCTTGCCATTGGGCCT +
Preference number: 5 (lower is better)
Translates to: VPVPGPLGILVAVGR*DGWPLGAPGLAIGP
Trigger: AGGCCCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAACGAGAATGCCCAGGGGTCCTGGAACGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTGGGGGACCGGCTTGTaGGGATCCCCAGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLWGTGL*GSPVLA
Trigger: TGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCCA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCTTGGTGCTCCAGGTCTaGCCATTGGGCCTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPLVLQV*PLGLRV
Trigger: CACCCGCAGGCCCAATGGCAAGACCTGGAGCACCAA...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CTCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCGAGATGGCTGGCCGCTaGGTGCTCCAGGTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LPYDPPAPSSASPFLLPPEMAGR*VLQVLP
Trigger: TGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTC...GGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCGGCGGGTCTCAGGGTaGTCACGGTCTGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKRRVSG*SRSAQS
Trigger: AGACTGGGCAGACCGTGACAACCCTGAGACCCGCCG...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCCGGCGGGTCTCAGGGTaGTCACGGTCTGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPRRVSG*SRSAQS
Trigger: AGACTGGGCAGACCGTGACAACCCTGAGACCCGCCG...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTTCCTGGGGGACCGGCTaGTTGGGATCCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPSWGTG*LGSPVL
Trigger: CAAGACTGGGGATCCCAACAAGCCGGTCCCCCAGGA...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGACATTACAGCCCACTTaGTCTGCCAGCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLTLQPT*SASRLV
Trigger: CACCAGCCTGCTGGCAGACAAAGTGGGCTGTAATGT...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGAGCCCTACCAGGGAGTaGGGGATCATAGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLSPTRE*GIIVMV
Trigger: CACCATCACTATGATCCCCAACTCCCTGGTAGGGCT...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGTGGCTGTGCTCTGAGTaGGAGCTATACCCGGGTAGT +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLWLCSE*ELYPGS
Trigger: ACTACCCGGGTATAGCTCCAACTCAGAGCACAGCCA...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS CCA 90 bp CCACGTGGTAGCGGGCTGGCTGGATGTCCTGCTCTACCAGCTCCTTaGCACTCTTTTGCCGAAGACAGTCCACCATATCCACGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: PRGSGLAGCPALPAP*HSFAEDSPPYPRCP
Trigger: TGGACACCGTGGATATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCAGGACATCCAGCCAGCCCGCTACCACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000476589.1
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGCTGCCAACCGTGGGCTaGGGGCTCAGGGACAGCGAG +
Preference number: 5 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVLPTVG*GLRDSE
Trigger: CTCGCTGTCCCTGAGCCCCAAGCCCACGGTTGGCAG...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTGCGACGATATCCAAGTaGGCAGTGAACCAGACCGGC +
Preference number: 5 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPATISK*AVNQTG
Trigger: GCCGGTCTGGTTCACTGCCAACTTGGATATCGTCGC...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCCCCTACGACCCTCCAGCTCCATCCAGTGCTAGCCCCTTTCTCCTTCCACCCCGGTGTACTTCACTGGTaGGTAGTTCACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SPTTLQLHPVLAPFSFHPGVLHW*VVHSPA
Trigger: AGCTGGGCTGTGAACTACCAACCAGTGAAGTACACC...GGGGTGGAAGGAGAAAGGGGCTAGCACTGGATGGAGCTGGAGGGTCGTAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGTTGGTGCTCCAGGTCTaGCCATTGGGCCTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: CLRVCVCVCACVPGSGRELVLQV*PLGLRV
Trigger: CACCCGCAGGCCCAATGGCAAGACCTGGAGCACCAA...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAGATGGCTGGCCGCTaGGTGCTCCAGGTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGEMAGR*VLQVLP
Trigger: TGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTC...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGGCAGCCCGGTACTGTaGAACCCTGCGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAGSPVL*NPAAKV
Trigger: CACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGCC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCGCCAGGCCAATGCTGTaGGCCTTTGGGGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPARPML*AFGEAG
Trigger: ACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGC...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS TCA 90 bp GATTGGCTGTGCTCTGAGTTGGAGCTATACCCGGGTAGTGGAGTGTaGGTGGGGCAGCCCGGTACTGTTGAACCCTGCGGCAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: DWLCSELELYPGSGV*VGQPGTVEPCGKGV
Trigger: AACACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGCCCCACTCACACTCCACTACCCGGGTATAGCTCCAACTCAGAGCACAGCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGCATGGCCACACTGACTaGAACCTCAAAACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLHGHTD*NLKTEL
Trigger: GAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCATG...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTAGACCCTCGCCCTGGTaGACACCTAGCATGATGTCA +
Preference number: 5 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPRPSPW*TPSMMS
Trigger: TGACATCATGCTAGGTGTCAACCAGGGCGAGGGTCT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGAACATGTCATGCAGGTaGTATAGGTGGGGCACCAGA +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLNMSCR*YRWGTR
Trigger: TCTGGTGCCCCACCTATACAACCTGCATGACATGTT...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS TCA 90 bp CACAGCATCAGCCCAATAGGCAGCCCCTTCATGGCCACACTGACTTaGACCTCAAAACTGAGCTCTCGAGGGACACCTACAGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HSISPIGSPFMATLT*TSKLSSRGTPTGAQ
Trigger: CTGGGCACCTGTAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCATGAAGGGGCTGCCTATTGGGCTGATGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS CCA 90 bp TGTGGGAGCTGTGGGTGGTATCCGGAGGCGGCACTTTGGTGGTGGTaGACGTATAGTGGAACATGTCATGCAGGTTGTATAGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: CGSCGWYPEAALWWW*TYSGTCHAGCIGGA
Trigger: TGCCCCACCTATACAACCTGCATGACATGTTCCACTATACGTCCACCACCACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS-3UTR CAA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCACAGAGCAGAGCCACTTaGGATGATGGCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPQSRAT*DDGSLE
Trigger: TTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCTG...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCCTCCAGGTCTTGCCATaGGGCCTGCGGGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTLQVLP*GLRVMW
Trigger: CCACATCACCCGCAGGCCCAATGGCAAGACCTGGAG...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGTTGGTGCTCCAGGTCTaGCCATTGGGCCTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVLVLQV*PLGLRV
Trigger: CACCCGCAGGCCCAATGGCAAGACCTGGAGCACCAA...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCAGCCCTACCAGGGAGTaGGGGATCATAGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPSPTRE*GIIVMV
Trigger: CACCATCACTATGATCCCCAACTCCCTGGTAGGGCT...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp AGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCCATCCTTCCTGGGGGTCTaGTTCCTTGGTCTGATTGTG +
Preference number: 5 (lower is better)
Translates to: SPPHGHRESWRSLPYDPPSFLGV*FLGLIV
Trigger: CACAATCAGACCAAGGAACAAGACCCCCAGGAAGGA...TGGAGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCGGACACAGAGAGAGTaGGAGATCTCTCCCCTACGA +
Preference number: 5 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKRTQRE*EISPLR
Trigger: TCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCG...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGGCGACGATATCCAAGTaGGCAGTGAACCAGACCGGC +
Preference number: 5 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGATISK*AVNQTG
Trigger: GCCGGTCTGGTTCACTGCCAACTTGGATATCGTCGC...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTTGGGGGACCGGCTTGTaGGGATCCCCAGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAWGTGL*GSPVLA
Trigger: TGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCCA...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGGAGATGGCTGGCCGCTaGGTGCTCCAGGTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLEMAGR*VLQVLP
Trigger: TGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTC...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTATCATAGTGATGGTGTaGGGGGTCATGAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPIIVMV*GVMSGM
Trigger: CATCCCACTCATGACCCCCAACACCATCACTATGAT...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGAGGGAGAGCCCTACCAGGGAGTaGGGGATCATAGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: CLRVCVCVCACVPGSGRESPTRE*GIIVMV
Trigger: CACCATCACTATGATCCCCAACTCCCTGGTAGGGCT...CTCCCTCCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTGGCTGTGCTCTGAGTaGGAGCTATACCCGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAWLCSE*ELYPGS
Trigger: ACTACCCGGGTATAGCTCCAACTCAGAGCACAGCCA...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCGGACACAGAGAGAGTaGGAGATCTCTCCCCTACGA +
Preference number: 5 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGRTQRE*EISPLR
Trigger: TCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCCGGACACAGAGAGAGTaGGAGATCTCTCCCCTACGA +
Preference number: 5 (lower is better)
Translates to: RCSPNLRSPGLARPMLLARTQRE*EISPLR
Trigger: TCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCG...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGGAAGCAGGTCACCCTGGGCTTCCATAGTACGTaGTTCACCAAATCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: HLVWPGQCCWPLGKQVTLGFHST*FTKSKV
Trigger: GACCTTAGATTTGGTGAACAACGTACTATGGAAGCC...CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCGGGCCTGAAGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATGGCCACACTGACTaGAACCTCAAAACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SGLKPSLPEALSTHGLEKHGHTD*NLKTEL
Trigger: GAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCATG...CTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCTTCAGGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATCTCCAGGTCTTGCCATaGGGCCTGCGGGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANLQVLP*GLRVMW
Trigger: CCACATCACCCGCAGGCCCAATGGCAAGACCTGGAG...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACCTCCAGGTCTTGCCATaGGGCCTGCGGGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYLQVLP*GLRVMW
Trigger: CCACATCACCCGCAGGCCCAATGGCAAGACCTGGAG...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAGGCAGCCCGGTACTGTaGAACCCTGCGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLGSPVL*NPAAKV
Trigger: CACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGCC...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGCAGCCCTCCACACGGACACAGAGAGAGTTGGAGATCTCTCCCCTACGACCCTCACATCTGTCTATGTTaGTGCAGGTGGATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: CSPPHGHRESWRSLPYDPHICLC*CRWICC
Trigger: ACAGCAGATCCACCTGCACAAACATAGACAGATGTG...AGGGTCGTAGGGGAGAGATCTCCAACTCTCTCTGTGTCCGTGTGGAGGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGCATGGCCACACTGACTaGAACCTCAAAACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGHGHTD*NLKTEL
Trigger: GAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCATG...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCTTTGGGTTTCGGGCGCATTCCTaGGAAATCCGCTTTACATCC +
Preference number: 5 (lower is better)
Translates to: SPNLRSPGLARPMLLAFGFRAHS*EIRFTS
Trigger: GGATGTAAAGCGGATTTCCAAGGAATGCGCCCGAAA...CCCAAAGGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358741.4
CDS-3UTR CAA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGGGTGTACTTCACTGGTaGGTAGTTCACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGGVLHW*VVHSPA
Trigger: AGCTGGGCTGTGAACTACCAACCAGTGAAGTACACC...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTGCAGGTGGATCTGCTGTAGGGTGTGGGTGCGTGCGTATACATATATGTGTGAGACCCTCGCCCTGGTaGACACCTAGCATGATGTCA +
Preference number: 5 (lower is better)
Translates to: CAGGSAVGCGCVRIHICVRPSPW*TPSMMS
Trigger: TGACATCATGCTAGGTGTCAACCAGGGCGAGGGTCT...CACACATATATGTATACGCACGCACCCACACCCTACAGCAGATCCACCTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCTCCTGGGGGACCGGCTaGTTGGGATCCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSSWGTG*LGSPVL
Trigger: CAAGACTGGGGATCCCAACAAGCCGGTCCCCCAGGA...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCAACATGTCATGCAGGTaGTATAGGTGGGGCACCAGA +
Preference number: 5 (lower is better)
Translates to: RCSPNLRSPGLARPMLLANMSCR*YRWGTR
Trigger: TCTGGTGCCCCACCTATACAACCTGCATGACATGTT...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGGCAGCCCGGTACTGTaGAACCCTGCGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSGSPVL*NPAAKV
Trigger: CACCTTTGCCGCAGGGTTCAACAGTACCGGGCTGCC...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCTCCCAAGTCTGGAGTaGGTCGGTGGTGCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLLPSLE*VGGAVP
Trigger: TGGAACTGCACCACCGACCAACTCCAGACTTGGGAG...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTCAATGCTGTTGGCCTTaGGGGAAGCAGGTCACCCTG +
Preference number: 5 (lower is better)
Translates to: HSTLFTKSKVTWSGQANAQCCWP*GKQVTL
Trigger: CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTG...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAGCGACGATATCCAAGTaGGCAGTGAACCAGACCGGC +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLATISK*AVNQTG
Trigger: GCCGGTCTGGTTCACTGCCAACTTGGATATCGTCGC...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCCAGAGCAGAGCCACTTaGGATGATGGCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTQSRAT*DDGSLE
Trigger: TTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCTG...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTACATTACAGCCCACTTaGTCTGCCAGCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HSTLFTKSKVTWSGQANATLQPT*SASRLV
Trigger: CACCAGCCTGCTGGCAGACAAAGTGGGCTGTAATGT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCCTCCTTGGCACTCTTTaGCCGAAGACAGTCCACCAT +
Preference number: 5 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTLLGTL*PKTVHH
Trigger: ATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAG...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTGCTCTACCAGCTCCTaGGCACTCTTTTGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTCSTSS*ALFCRR
Trigger: TCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTAGACCCTCGCCCTGGTaGACACCTAGCATGATGTCA +
Preference number: 5 (lower is better)
Translates to: HSTLFTKSKVTWSGQANARPSPW*TPSMMS
Trigger: TGACATCATGCTAGGTGTCAACCAGGGCGAGGGTCT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CTTCAGCTGCTGTTTCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCTCCGTATTTGTGTTTTaGTACATGCGGGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: LQLLFHGSSVYRGLICVPSVFVF*YMRVHV
Trigger: GACATGCACCCGCATGTACAAAAACACAAATACGGA...GGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGAAACAGCAGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTACTCCCAAGTCTGGAGTaGGTCGGTGGTGCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLLPSLE*VGGAVP
Trigger: TGGAACTGCACCACCGACCAACTCCAGACTTGGGAG...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTACAATGCTGTTGGCCTTaGGGGAAGCAGGTCACCCTG +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLQCCWP*GKQVTL
Trigger: CAGGGTGACCTGCTTCCCCAAAGGCCAACAGCATTG...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGCCAGGCCAATGCTGTaGGCCTTTGGGGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSARPML*AFGEAG
Trigger: ACCTGCTTCCCCAAAGGCCAACAGCATTGGCCTGGC...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATACATTACAGCCCACTTaGTCTGCCAGCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANTLQPT*SASRLV
Trigger: CACCAGCCTGCTGGCAGACAAAGTGGGCTGTAATGT...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGCTCCTTGGCACTCTTTaGCCGAAGACAGTCCACCAT +
Preference number: 5 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLLLGTL*PKTVHH
Trigger: ATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAG...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TGTGTGTGTCTGCGTGTGTGTGTGTGTGTGTGTGCATGTGTTCCTGGATCTGGGTCTGTATACATGAACTaGATGGTCTCTCGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: CVCLRVCVCVCACVPGSGSVYMN*MVSRRV
Trigger: CACCCTGCGAGAGACCATCAAGTTCATGTATACAGA...CCCAGATCCAGGAACACATGCACACACACACACACACACACGCAGACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCCTCCCAAGTCTGGAGTaGGTCGGTGGTGCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSLPSLE*VGGAVP
Trigger: TGGAACTGCACCACCGACCAACTCCAGACTTGGGAG...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGTTGGCCGGCTTCCATAGTACGTaGTTCACCAAATCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: RCSPNLRSPGLARPMLLAGFHST*FTKSKV
Trigger: GACCTTAGATTTGGTGAACAACGTACTATGGAAGCC...GGCCAACAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTGCTCTACCAGCTCCTaGGCACTCTTTTGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYCSTSS*ALFCRR
Trigger: TCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCA...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTCTGTATACATGAACTaGATGGTCTCTCGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTSVYMN*MVSRRV
Trigger: CACCCTGCGAGAGACCATCAAGTTCATGTATACAGA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCGGCGGGTCTCAGGGTaGTCACGGTCTGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SASPFKGFVQVYFRICVFRRVSG*SRSAQS
Trigger: AGACTGGGCAGACCGTGACAACCCTGAGACCCGCCG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTGGGGGACCGGCTTGTaGGGATCCCCAGTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFWGTGL*GSPVLA
Trigger: TGCCAAGACTGGGGATCCCAACAAGCCGGTCCCCCA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTCCTGGGGGACCGGCTaGTTGGGATCCCCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFSWGTG*LGSPVL
Trigger: CAAGACTGGGGATCCCAACAAGCCGGTCCCCCAGGA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTAATGATCTCGGACCCTaGGTTTCAGCCCGATGTGAA +
Preference number: 5 (lower is better)
Translates to: HSTLFTKSKVTWSGQANANDLGP*VSARCE
Trigger: TTCACATCGGGCTGAAACCAAGGGTCCGAGATCATT...AGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATGCTGAATGATCTCGGACCCTaGGTTTCAGCCCGATGTGAA +
Preference number: 5 (lower is better)
Translates to: IVRCSPNLRSPGLARPMLNDLGP*VSARCE
Trigger: TTCACATCGGGCTGAAACCAAGGGTCCGAGATCATT...CAGCATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGCACATCTGTCTATGTTaGTGCAGGTGGATCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLHICLC*CRWICC
Trigger: ACAGCAGATCCACCTGCACAAACATAGACAGATGTG...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp GGCGAATTTCTGATAGCATTTCCCCAAGGGCAGAGGCAAAACCCAGATCAGACCTTCCTACAAATTTTCTaGTTGGGCTTTCGGGCGCAT +
Preference number: 5 (lower is better)
Translates to: GEFLIAFPQGQRQNPDQTFLQIF*LGFRAH
Trigger: ATGCGCCCGAAAGCCCAACAAGAAAATTTGTAGGAA...GGTCTGATCTGGGTTTTGCCTCTGCCCTTGGGGAAATGCTATCAGAAATTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358741.4
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCCAGAGCAGAGCCACTTaGGATGATGGCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSQSRAT*DDGSLE
Trigger: TTCCAGAGAGCCATCATCCAAAGTGGCTCTGCTCTG...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTCCATAGTACGTTGTTCACCAAATCTAAGGTCACCTGGTCTGGCCAGGCCAATAACATGTCATGCAGGTaGTATAGGTGGGGCACCAGA +
Preference number: 5 (lower is better)
Translates to: FHSTLFTKSKVTWSGQANNMSCR*YRWGTR
Trigger: TCTGGTGCCCCACCTATACAACCTGCATGACATGTT...ATTGGCCTGGCCAGACCAGGTGACCTTAGATTTGGTGAACAACGTACTATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCTCCTTCCTGGGGGTCTaGTTCCTTGGTCTGATTGTG +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSSFLGV*FLGLIV
Trigger: CACAATCAGACCAAGGAACAAGACCCCCAGGAAGGA...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACCTACAAATTTTCTTGTaGGGCTTTCGGGCGCATTCC +
Preference number: 5 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYLQIFL*GFRAHS
Trigger: GGAATGCGCCCGAAAGCCCAACAAGAAAATTTGTAG...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358741.4
CDS-3UTR CAA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCAGCATAACATCATTCTaGGAGAAGTTGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SPPFQRLLALMGWKSICSSITSF*EKLQGK
Trigger: TTTCCCCTGCAACTTCTCCAAGAATGATGTTATGCT...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCATGGGTCCTCGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGAGCATAACATCATTCTaGGAGAAGTTGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SWVLGLPRTHLRPHLKGLSITSF*EKLQGK
Trigger: TTTCCCCTGCAACTTCTCCAAGAATGATGTTATGCT...CAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCGAGGACCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCAATGATCTCGGACCCTaGGTTTCAGCCCGATGTGAA +
Preference number: 5 (lower is better)
Translates to: LPRTHLRPHLKGLFRFTSNDLGP*VSARCE
Trigger: TTCACATCGGGCTGAAACCAAGGGTCCGAGATCATT...GGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp AGCCCTCCCTTCCAGAGGCTCTTAGCACTCATGGGTTGGAAAAGCATTTGTTCCCCCCATTTAAAGGGTTaGTTCAGGTTTACTTCCGTA +
Preference number: 5 (lower is better)
Translates to: SPPFQRLLALMGWKSICSPHLKG*FRFTSV
Trigger: TACGGAAGTAAACCTGAACAAACCCTTTAAATGGGG...GGAACAAATGCTTTTCCAACCCATGAGTGCTAAGAGCCTCTGGAAGGGAGGGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTATCCGTATTTGTGTTTTaGTACATGCGGGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLSVFVF*YMRVHV
Trigger: GACATGCACCCGCATGTACAAAAACACAAATACGGA...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CGGTTTACCGAGGACTCATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACGGCTTCCATAGTACGTaGTTCACCAAATCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: RFTEDSSASPFKGFVQVYGFHST*FTKSKV
Trigger: GACCTTAGATTTGGTGAACAACGTACTATGGAAGCC...GTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATGAGTCCTCGGTAAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTCTCCTTGGCACTCTTTaGCCGAAGACAGTCCACCAT +
Preference number: 5 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFLLGTL*PKTVHH
Trigger: ATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAG...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTAAGCATAACATCATTCTaGGAGAAGTTGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLSITSF*EKLQGK
Trigger: TTTCCCCTGCAACTTCTCCAAGAATGATGTTATGCT...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp ACCTGGGGGCCCAATAGTGATGTGGCTTCCATAGTACGTTGTTCACCAAATCTACCCCATTTAAAGGGTTaGTTCAGGTTTACTTCCGTA +
Preference number: 5 (lower is better)
Translates to: TWGPNSDVASIVRCSPNLPHLKG*FRFTSV
Trigger: TACGGAAGTAAACCTGAACAAACCCTTTAAATGGGG...TAGATTTGGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTTGCTCTACCAGCTCCTaGGCACTCTTTTGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: SASPFKGFVQVYFRICVFCSTSS*ALFCRR
Trigger: TCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCA...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTATCATAGTGATGGTGTaGGGGGTCATGAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFIIVMV*GVMSGM
Trigger: CATCCCACTCATGACCCCCAACACCATCACTATGAT...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTATCATAGTGATGGTGTaGGGGGTCATGAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: SASPFKGFVQVYFRICVFIIVMV*GVMSGM
Trigger: CATCCCACTCATGACCCCCAACACCATCACTATGAT...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp CATCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTCCGTATTTGTGTTTTaGTACATGCGGGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: HLRPHLKGLFRFTSVFVFSVFVF*YMRVHV
Trigger: GACATGCACCCGCATGTACAAAAACACAAATACGGA...AAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS-3UTR CAA 90 bp TCTGCGTCCCCATTTAAAGGGTTTGTTCAGGTTTACTTCCGTATTTGTGTTTTTCCCCATTTAAAGGGTTaGTTCAGGTTTACTTCCGTA +
Preference number: 5 (lower is better)
Translates to: SASPFKGFVQVYFRICVFPHLKG*FRFTSV
Trigger: TACGGAAGTAAACCTGAACAAACCCTTTAAATGGGG...AAAAACACAAATACGGAAGTAAACCTGAACAAACCCTTTAAATGGGGACGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000536169.5
CDS TCA 72 bp CCAGACAGGCCTGTTCCCCGGGCTGCTGCAAGCGACTaGACCGGGCCACGGACCACCCATATCGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PDRPVPRAAASD*TGPRTTHIASR
Trigger: CCTGGAGGCGATATGGGTGGTCCGTGGCCCGGTTCAGTCGCTTGCAGCAGCCCGGGGAACAGGCCTGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS TCA 72 bp GCTTGGTGCTCCAGGTCTTGCCATTGGGCCTGCGGGTaGTGTGGGAGCTGTGGGTGGTATCCGGAGGCGGCA +
Preference number: 6 (lower is better)
Translates to: AWCSRSCHWACG*CGSCGWYPEAA
Trigger: TGCCGCCTCCGGATACCACCCACAGCTCCCACATCACCCGCAGGCCCAATGGCAAGACCTGGAGCACCAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS GCA 72 bp CCTGGTCCCCGTTCCAGGACCCCTGGGCATTCTCGTTaGTGTAGGCAGGTGAGATGGCTGGCCGCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: PGPRSRTPGHSR*CRQVRWLAAWC
Trigger: GCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAACGAGAATGCCCAGGGGTCCTGGAACGGGGACCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp GGGAAAGTGTGTGGCGTTCCGGATGCCCGACCAGGATaGGGGTGGTTCAGGGGGCAGGAAACGTTTCTCGCC +
Preference number: 6 (lower is better)
Translates to: GKVCGVPDARPG*GWFRGQETFLA
Trigger: GGCGAGAAACGTTTCCTGCCCCCTGAACCACCCCCATCCTGGTCGGGCATCCGGAACGCCACACACTTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS CCA 72 bp GTCTTGCCATTGGGCCTGCGGGTGATGTGGGAGCTGTaGGTGGTATCCGGAGGCGGCACTTTGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: VLPLGLRVMWEL*VVSGGGTLVVV
Trigger: CACCACCACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCCACATCACCCGCAGGCCCAATGGCAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp TCACGAGGGTTCTCCACCAGGAGTGGCCCTGCATCCTaGTCCCCGTTCCAGGACCCCTGGGCATTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: SRGFSTRSGPAS*SPFQDPWAFSL
Trigger: CAACGAGAATGCCCAGGGGTCCTGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAACCCTCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CAA 72 bp GAGATGGCTGGCCGCTTGGTGCTCCAGGTCTTGCCATaGGGCCTGCGGGTGATGTGGGAGCTGTGGGTGGTA +
Preference number: 6 (lower is better)
Translates to: EMAGRLVLQVLP*GLRVMWELWVV
Trigger: TACCACCCACAGCTCCCACATCACCCGCAGGCCCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp GGCAGCATGACTTCGGGCACAGCTGTGTGGATGTTCTaGGGGCACACTGGGGGAAAGTGTGTGGCGTTCCGG +
Preference number: 6 (lower is better)
Translates to: GSMTSGTAVWMF*GHTGGKCVAFR
Trigger: CCGGAACGCCACACACTTTCCCCCAGTGTGCCCCCAGAACATCCACACAGCTGTGCCCGAAGTCATGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS CCA 72 bp TTCAGTGGAGTAGTCACGAGGGTTCTCCACCAGGAGTaGCCCTGCATCCTGGTCCCCGTTCCAGGACCCCTG +
Preference number: 6 (lower is better)
Translates to: FSGVVTRVLHQE*PCILVPVPGPL
Trigger: CAGGGGTCCTGGAACGGGGACCAGGATGCAGGGCCACTCCTGGTGGAGAACCCTCGTGACTACTCCACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS TCA 72 bp GGCAGTGGTACTCGGGCACCCCTTAGCTTCCCAAAGTaGGTGTTGACTGTGGGTGCTGGGGCCTGGGTACTG +
Preference number: 6 (lower is better)
Translates to: GSGTRAPLSFPK*VLTVGAGAWVL
Trigger: CAGTACCCAGGCCCCAGCACCCACAGTCAACACTCACTTTGGGAAGCTAAGGGGTGCCCGAGTACCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS TCA 72 bp TGCTCTGAGTTGGAGCTATACCCGGGTAGTGGAGTGTaGGTGGGGCAGCCCGGTACTGTTGAACCCTGCGGC +
Preference number: 6 (lower is better)
Translates to: CSELELYPGSGV*VGQPGTVEPCG
Trigger: GCCGCAGGGTTCAACAGTACCGGGCTGCCCCACTCACACTCCACTACCCGGGTATAGCTCCAACTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp ACCCCTGGGCATTCTCGTTGCTGTAGGCAGGTGAGATaGCTGGCCGCTTGGTGCTCCAGGTCTTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: TPGHSRCCRQVR*LAAWCSRSCHW
Trigger: CCAATGGCAAGACCTGGAGCACCAAGCGGCCAGCCATCTCACCTGCCTACAGCAACGAGAATGCCCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp CTGAGTTGGAGCTATACCCGGGTAGTGGAGTGTGAGTaGGGCAGCCCGGTACTGTTGAACCCTGCGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LSWSYTRVVECE*GSPVLLNPAAK
Trigger: CTTTGCCGCAGGGTTCAACAGTACCGGGCTGCCCCACTCACACTCCACTACCCGGGTATAGCTCCAACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp TGCAGATCGGCTGTCACCACTGAGGGCTCCACCCACTaGTGGTCAGTGAAGAGTGCCACCAGTGTTTTACGG +
Preference number: 6 (lower is better)
Translates to: CRSAVTTEGSTH*WSVKSATSVLR
Trigger: CCGTAAAACACTGGTGGCACTCTTCACTGACCACCAGTGGGTGGAGCCCTCAGTGGTGACAGCCGATCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp GGGAGCTGTGGGTGGTATCCGGAGGCGGCACTTTGGTaGTGGTGGACGTATAGTGGAACATGTCATGCAGGT +
Preference number: 6 (lower is better)
Translates to: GSCGWYPEAALW*WWTYSGTCHAG
Trigger: ACCTGCATGACATGTTCCACTATACGTCCACCACCACCAAAGTGCCGCCTCCGGATACCACCCACAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp AGCGGGCTGGCTGGATGTCCTGCTCTACCAGCTCCTTaGCACTCTTTTGCCGAAGACAGTCCACCATATCCA +
Preference number: 6 (lower is better)
Translates to: SGLAGCPALPAP*HSFAEDSPPYP
Trigger: TGGATATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCAGGACATCCAGCCAGCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000476589.1
ENST00000536169.5
CDS CAA 90 bp TCACAGCATCAGCCCAATAGGCAGCCCCTTCATGGCCACACTGACTaGAACCTCAAAACTGAGCTCTCGAGGGACACCTACAGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SQHQPNRQPLHGHTD*NLKTELSRDTYRCP
Trigger: TGGGCACCTGTAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCATGAAGGGGCTGCCTATTGGGCTGATGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS GCA 72 bp TGGATGTCCTGCTCTACCAGCTCCTTGGCACTCTTTTaGCGAAGACAGTCCACCATATCCACGGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: WMSCSTSSLALF*RRQSTISTVSS
Trigger: GCTGGACACCGTGGATATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCAGGACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp AGCTGTGGGTGGTATCCGGAGGCGGCACTTTGGTGGTaGTGGACGTATAGTGGAACATGTCATGCAGGTTGT +
Preference number: 6 (lower is better)
Translates to: SCGWYPEAALWW*WTYSGTCHAGC
Trigger: ACAACCTGCATGACATGTTCCACTATACGTCCACCACCACCAAAGTGCCGCCTCCGGATACCACCCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CAA 72 bp CTGGATGTCCTGCTCTACCAGCTCCTTGGCACTCTTTaGCCGAAGACAGTCCACCATATCCACGGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: LDVLLYQLLGTL*PKTVHHIHGVQ
Trigger: CTGGACACCGTGGATATGGTGGACTGTCTTCGGCAAAAGAGTGCCAAGGAGCTGGTAGAGCAGGACATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000476589.1
ENST00000536169.5
CDS TCA 72 bp AGCCCAATAGGCAGCCCCTTCATGGCCACACTGACTTaGACCTCAAAACTGAGCTCTCGAGGGACACCTACA +
Preference number: 6 (lower is better)
Translates to: SPIGSPFMATLT*TSKLSSRGTPT
Trigger: TGTAGGTGTCCCTCGAGAGCTCAGTTTTGAGGTTCAAGTCAGTGTGGCCATGAAGGGGCTGCCTATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000395855.6
ENST00000536169.5
CDS CCA 72 bp TGTGGGTGGTATCCGGAGGCGGCACTTTGGTGGTGGTaGACGTATAGTGGAACATGTCATGCAGGTTGTATA +
Preference number: 6 (lower is better)
Translates to: CGWYPEAALWWW*TYSGTCHAGCI
Trigger: TATACAACCTGCATGACATGTTCCACTATACGTCCACCACCACCAAAGTGCCGCCTCCGGATACCACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358741.4
ENST00000374051.7
ENST00000476589.1
ENST00000536169.5
CDS CCA 72 bp TACAAATTTTCTTGTTGGGCTTTCGGGCGCATTCCTTaGAAATCCGCTTTACATCCTCCGTCGGCACATAGA +
Preference number: 6 (lower is better)
Translates to: YKFSCWAFGRIP*KSALHPPSAHR
Trigger: TCTATGTGCCGACGGAGGATGTAAAGCGGATTTCCAAGGAATGCGCCCGAAAGCCCAACAAGAAAATTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358741.4