RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLGN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169992

Ensembl transcript IDs: ENST00000302926.7, ENST00000570940.1, ENST00000572893.1, ENST00000575301.5, ENST00000639647.1, ENST00000639804.1, ENST00000640620.2, ENST00000640833.1

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTaGTTGCCCTTAGTTTCCCCTGCCCTGCCTGGGACTGGGAAATTC +
Preference number: 1 (lower is better)
Translates to: TGGSPLTCHIPRPVS*LPLVSPALPGTGKF
Trigger: GAATTTCCCAGTCCCAGGCAGGGCAGGGGAAACTAAGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR GCA 90 bp CAAGGGCCGGGCCTCCCTCGGGGTTTGTTCACCCTCCTCAGCTCCTaGCAACTAGAAGTCTGTGCTCACCTGCCATGTGAGGAGGAACTG +
Preference number: 1 (lower is better)
Translates to: QGPGLPRGLFTLLSS*QLEVCAHLPCEEEL
Trigger: CAGTTCCTCCTCACATGGCAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCGAGGGAGGCCCGGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR TCA 90 bp GCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCT +
Preference number: 1 (lower is better)
Translates to: AGRNPMSTLALLDGV*RLHRRKASCQVLLP
Trigger: AGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR GCA 90 bp ATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCT +
Preference number: 1 (lower is better)
Translates to: MRPGHGKISFQAASG*VDSSLPQQEICVCP
Trigger: AGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 90 bp ACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCT +
Preference number: 1 (lower is better)
Translates to: THRREESHVHLSAAG*RVTTPQEKSQLPSP
Trigger: AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 90 bp GAGGGGGCTGTGATTTCCTCGCTGCTTCCCAGGCTCCATCCTCTGTaGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCA +
Preference number: 1 (lower is better)
Translates to: EGAVISSLLPRLHPL*SGGQGSLYVNTPLP
Trigger: TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGCCTGGGAAGCAGCGAGGAAATCACAGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR GCA 90 bp CCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACC +
Preference number: 1 (lower is better)
Translates to: PVVQRPRSREETGLL*VGKTRIAGRNPMST
Trigger: GGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 90 bp TGTGATTTCCTCGCTGCTTCCCAGGCTCCATCCTCTGTGGTCTGGTaGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCC +
Preference number: 1 (lower is better)
Translates to: CDFLAASQAPSSVVW*PRVTVCEHTTSRVS
Trigger: GGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGCCTGGGAAGCAGCGAGGAAATCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 90 bp CCCTCGCCCTGTATCCTGCTTGCCCTTAGTTTCCCCTGCCCTGCCTaGGACTGGGAAATTCTTGGCACATTTTGGGAGTCTTTCCGCTCA +
Preference number: 1 (lower is better)
Translates to: PSPCILLALSFPCPA*DWEILGTFWESFRS
Trigger: TGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCAGGGGAAACTAAGGGCAAGCAGGATACAGGGCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CCA 90 bp CTGTCTACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATaGCTGTTTGGAGAGGAGCTAGACCAGGCAGGGGAAAGGATCAGA +
Preference number: 1 (lower is better)
Translates to: LSTGFRAQVSSIWRA*LFGEELDQAGERIR
Trigger: TCTGATCCTTTCCCCTGCCTGGTCTAGCTCCTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR GCA 90 bp TCTTTCCGCTCAAATCCACCTACCCAGTTTGGCACGGATGAGCAATaGTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAATGAGG +
Preference number: 1 (lower is better)
Translates to: SFRSNPPTQFGTDEQ*SEAWGKGCPRTTMR
Trigger: CCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGGTGGATTTGAGCGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CCA 90 bp AATCCACCTACCCAGTTTGGCACGGATGAGCAATGCTCTGAGGCCTaGGGAAAAGGCTGTCCTCGGACCACAATGAGGGCTTTGGTCAAA +
Preference number: 1 (lower is better)
Translates to: NPPTQFGTDEQCSEA*GKGCPRTTMRALVK
Trigger: TTTGACCAAAGCCCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGGTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR GCA 90 bp CCACTGTGTCCCTTAAGCCCTTCCAGACATCATTCTTTTCCCAAATaGCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAA +
Preference number: 1 (lower is better)
Translates to: PLCPLSPSRHHSFPK*PSPRPSGESPHTFQ
Trigger: TTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGTCTGGAAGGGCTTAAGGGACACAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CCA 90 bp AGTTTCCCCTGCCCTGCCTGGGACTGGGAAATTCTTGGCACATTTTaGGAGTCTTTCCGCTCAAATCCACCTACCCAGTTTGGCACGGAT +
Preference number: 1 (lower is better)
Translates to: SFPCPAWDWEILGTF*ESFRSNPPTQFGTD
Trigger: ATCCGTGCCAAACTGGGTAGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCAGGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTCCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: QAGAPSPATSLALYPACPPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAATCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 2 (lower is better)
Translates to: LWKVRASPAERASSDLCQSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CAA 90 bp AGCGCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGCCTTCGGAGTGGCCGGGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SAAGWRVTTPQEKSQ*PSPPPCLRSGRARE
Trigger: CTCCCTGGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTCTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAG +
Preference number: 2 (lower is better)
Translates to: QAGAPSPATSLALYPACPLSAAG*RVTTPQ
Trigger: CTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAG...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CAA 90 bp GGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTaGCCCTTAGTTTCCCCTGCCCTGCCTGGGACTGGGAAATTCTTG +
Preference number: 2 (lower is better)
Translates to: GGSPLTCHIPRPVSC*PLVSPALPGTGKFL
Trigger: CAAGAATTTCCCAGTCCCAGGCAGGGCAGGGGAAACTAAGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCATCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 2 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: CWEERGRLPGETHIHMQEPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTAAGTCTGTGCTCACCTaGCATGTGAGGAGGAACTGG +
Preference number: 2 (lower is better)
Translates to: QAGAPSPATSLALYPACPKSVLT*HVRRNW
Trigger: CCAGTTCCTCCTCACATGGCAGGTGAGCACAGACTT...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTTCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 2 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGTCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 2 (lower is better)
Translates to: TQRNASWPRENKLPGSIRSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGGGGAGCCCCCTCACCTaGCACATCCCTCGCCCTGTA +
Preference number: 2 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEGSPLT*HIPRPV
Trigger: TACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCC...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGCCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: TQRNASWPRENKLPGSIRPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: CWEERGRLPGETHIHMQEQAASG*VDSSLP
Trigger: GGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGCAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLQAASG*VDSSLP
Trigger: GGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTG...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR TCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGTGCTCACCTGCCATGTaGGGAGGAACTGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGECSPAM*GGTGCW
Trigger: CCAGCACCCAGTTCCTCCTCACATGGCAGGTGAGCA...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR TCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGAGGAGGGTGGTCAGCTaGGGAGAAGGCTGGTCTGAC +
Preference number: 2 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGERRVVS*GEGWSD
Trigger: GTCAGACCAGCCTTCTCCTCAGCTGACCACCCTCCT...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGTGTGTCTGTCCTCTCTaGAAGGTGAGGGCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLCVCPL*KVRASP
Trigger: CGGGGAGGCCCTCACCTTCCAGAGAGGACAGACACA...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 2 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAAGGCTCCATCCTCTGTaGTCTGGTGGCCAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: CWEERGRLPGETHIHMQERLHPL*SGGQGS
Trigger: TGACCCTTGGCCACCAGACCACAGAGGATGGAGCCT...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGAGGAGAAAAGCCAGTTaGCAAGTCCTCCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGRRKAS*QVLLPA
Trigger: GGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCT...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAGGAGAAAAGCCAGTTaGCAAGTCCTCCTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PAHGKTHPVVRKHTSTRERRKAS*QVLLPA
Trigger: GGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCT...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR GCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 2 (lower is better)
Translates to: PAHGKTHPVVRKHTSTREETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR TCA 90 bp GAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAATGAGGGCTTTGGTCAAACATCTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: EAWGKGCPRTTMRALVKHLLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...ATGTTTGACCAAAGCCCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR TCA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCAAAACACACCCCGTTGTaGGAAAGCACACCTCCACGC +
Preference number: 2 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSKHTPL*ESTPPR
Trigger: GCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTT...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR TCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCAAGGGTCACTGTATGTaGACACACCACTTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: GHGKISFQAASGCVDSSLKGHCM*THHFQG
Trigger: ACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTT...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR TCA 90 bp CAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATGTTCCCCAGCACCGCTaGCCTCATTCTCCCAACCTG +
Preference number: 2 (lower is better)
Translates to: QMPKPKALRGVTSHISNYVPQHR*PHSPNL
Trigger: CAGGTTGGGAGAATGAGGTCAGCGGTGCTGGGGAAC...ATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACAAGAGAGGGGCCGTCTaGCTGGGGAAACACACATCC +
Preference number: 2 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHKRGAV*LGKHTS
Trigger: GGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTT...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAAGGCTCCATCCTCTGTaGTCTGGTGGCCAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LREMRPGHGKISFQAASGRLHPL*SGGQGS
Trigger: TGACCCTTGGCCACCAGACCACAGAGGATGGAGCCT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR TCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGACTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRLLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR TCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATAGGAGGGTGGTCAGCTaGGGAGAAGGCTGGTCTGAC +
Preference number: 2 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDRRVVS*GEGWSD
Trigger: GTCAGACCAGCCTTCTCCTCAGCTGACCACCCTCCT...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 2 (lower is better)
Translates to: TQRNASWPRENKLPGSIRETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTCTGGGCTTCTCTGCGTaGGAAAGACACGCATCGCAG +
Preference number: 2 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTLGFSA*ERHASQ
Trigger: CTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAG...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp CCTACCCAGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PTQFGTDEQCSEAWGKGCIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...ACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCATCCTCTGTGGTCTGGTaGCCAAGGGTCACTGTATGT +
Preference number: 2 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSSSVVW*PRVTVC
Trigger: ACATACAGTGACCCTTGGCCACCAGACCACAGAGGA...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACGGGGGAACAGGATTCTaGGGTACAAATCCCCACAGA +
Preference number: 2 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHGGTGF*GTNPHR
Trigger: TCTGTGGGGATTTGTACCCCAGAATCCTGTTCCCCC...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGGGAACAGGATTCTaGGGTACAAATCCCCACAGA +
Preference number: 2 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPGGTGF*GTNPHR
Trigger: TCTGTGGGGATTTGTACCCCAGAATCCTGTTCCCCC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACAGAGAAATGCGTCCTaGCCACGGGAAAATAAGCTT +
Preference number: 2 (lower is better)
Translates to: CWEERGRLPGETHIHMQEQRNAS*PRENKL
Trigger: AAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATCAATGCTCTGAGGCCTaGGGAAAAGGCTGTCCTCGG +
Preference number: 2 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDQCSEA*GKGCPR
Trigger: CCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTG...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCATGCCCTGCCTGGGACTaGGAAATTCTTGGCACATTT +
Preference number: 2 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSCPAWD*EILGTF
Trigger: AAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCA...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR TCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATCTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDLLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR GCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGATTTCAAATTATTCCTaGTGGTGTCTGCCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEISNYS*WCLPKP
Trigger: GGGCTTGGGCAGACACCAGCAGGAATAATTTGAAAT...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR TCA 90 bp GACTGGGAAATTCTTGGCACATTTTGGGAGTCTTTCCGCTCAAATCCACCTACCAAACACACCCCGTTGTaGGAAAGCACACCTCCACGC +
Preference number: 2 (lower is better)
Translates to: DWEILGTFWESFRSNPPTKHTPL*ESTPPR
Trigger: GCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTT...GGTAGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGATTCTTGGCACATTTTaGGAGTCTTTCCGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLILGTF*ESFRSN
Trigger: ATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAAT...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR GCA 72 bp GGGAGGCAGGGAAGTGCTGGGAAGAGAGGGGCCGTCTaGCTGGGGAAACACACATCCACATGCAAGAACCTG +
Preference number: 3 (lower is better)
Translates to: GRQGSAGKRGAV*LGKHTSTCKNL
Trigger: CAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCACTTCCCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR GCA 72 bp GGCCTCCCTCGGGGTTTGTTCACCCTCCTCAGCTCCTaGCAACTAGAAGTCTGTGCTCACCTGCCATGTGAG +
Preference number: 3 (lower is better)
Translates to: GLPRGLFTLLSS*QLEVCAHLPCE
Trigger: CTCACATGGCAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCGAGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CAA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGCAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRQEKSQ*PSPPPC
Trigger: GCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTG...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CAA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATCAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: RDWASLRGKDTHRREESHQEKSQ*PSPPPC
Trigger: GCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTG...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTCAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: ASLRGKDTHRREESHVHLQEKSQ*PSPPPC
Trigger: GCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTG...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR TCA 72 bp ATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTaGACACACCACTTCCAGGGTCTCCAGGGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: ILCGLVAKGHCM*THHFQGLQGEG
Trigger: TCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR TCA 72 bp CCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAGGTaGGGGCCTCCCCGGCAGAACGTGCTTCATCTGACT +
Preference number: 3 (lower is better)
Translates to: PSRKSVSVLSGR*GPPRQNVLHLT
Trigger: AGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAGAGGACAGACACAGATTTCCTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR GCA 72 bp CAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATCGCAGGGAGGAATCCC +
Preference number: 3 (lower is better)
Translates to: QRPRSREETGLL*VGKTRIAGRNP
Trigger: GGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR GCA 72 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGT +
Preference number: 3 (lower is better)
Translates to: GHGKISFQAASG*VDSSLPQQEIC
Trigger: ACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 72 bp GGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTaGGAAAGACACGCATCGCAGGGAGGAATCCCATGT +
Preference number: 3 (lower is better)
Translates to: GPDPEKRLGFSA*ERHASQGGIPC
Trigger: ACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 72 bp ACCCAGTTTGGCACGGATGAGCAATGCTCTGAGGCCTaGGGAAAAGGCTGTCCTCGGACCACAATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: TQFGTDEQCSEA*GKGCPRTTMRA
Trigger: AGCCCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR GCA 72 bp TCAAATCCACCTACCCAGTTTGGCACGGATGAGCAATaGTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACC +
Preference number: 3 (lower is better)
Translates to: SNPPTQFGTDEQ*SEAWGKGCPRT
Trigger: GGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGGTGGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR GCA 72 bp CCCTTAAGCCCTTCCAGACATCATTCTTTTCCCAAATaGCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCAC +
Preference number: 3 (lower is better)
Translates to: PLSPSRHHSFPK*PSPRPSGESPH
Trigger: GTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGTCTGGAAGGGCTTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CCA 72 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTG +
Preference number: 3 (lower is better)
Translates to: REESHVHLSAAG*RVTTPQEKSQL
Trigger: CAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 72 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGG +
Preference number: 3 (lower is better)
Translates to: PSCSKAQIQRRD*ASLRGKDTHRR
Trigger: CCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR CCA 72 bp CTGTCTACAGGGTTCAGGGCCCAGGTCTCTAGCATTTaGAGGGCATGGCTGTTTGGAGAGGAGCTAGACCAG +
Preference number: 3 (lower is better)
Translates to: LSTGFRAQVSSI*RAWLFGEELDQ
Trigger: CTGGTCTAGCTCCTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGTAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCACAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPQEKSQ*PSPPPC
Trigger: GCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTG...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR TCA 72 bp AATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAAGCCAGTTGCCAAGTC +
Preference number: 3 (lower is better)
Translates to: NPMSTLALLDGV*RLHRRKASCQV
Trigger: GACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
3UTR-3UTR CAA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCAACCACAATGAGGGCTTaGGTCAAACATGCGTGGCCT +
Preference number: 3 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSTTMRA*VKHAWP
Trigger: AGGCCACGCATGTTTGACCAAAGCCCTCATTGTGGT...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CCA 72 bp TGTATCCTGCTTGCCCTTAGTTTCCCCTGCCCTGCCTaGGACTGGGAAATTCTTGGCACATTTTGGGAGTCT +
Preference number: 3 (lower is better)
Translates to: CILLALSFPCPA*DWEILGTFWES
Trigger: AGACTCCCAAAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCAGGGGAAACTAAGGGCAAGCAGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR-3UTR CAA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGAATTCTTGGCACATTTaGGGAGTCTTTCCGCTCAAA +
Preference number: 3 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGENSWHI*GVFPLK
Trigger: TTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATT...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CCA 72 bp TGCCCTGCCTGGGACTGGGAAATTCTTGGCACATTTTaGGAGTCTTTCCGCTCAAATCCACCTACCCAGTTT +
Preference number: 3 (lower is better)
Translates to: CPAWDWEILGTF*ESFRSNPPTQF
Trigger: AAACTGGGTAGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTCACCAGCTCCTCCTCTaGTGGCAGCTCACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPHQLLL*WQLTAR
Trigger: GCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTGGTG...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTTCCTGCGGCACCGGCTaGTTGGGGTCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPSCGTG*LGSPVL
Trigger: CAAGACTGGGGACCCCAACCAGCCGGTGCCGCAGGA...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGGCGCGTGGTGGTGGTaGAGAGCTCCGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGGAWWW*RAPCAG
Trigger: ACCTGCACACGGAGCTCTTCACCACCACCACGCGCC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGTCCTCTCTGGAAGGTaGGGGCCTCCCCGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGVLSGR*GPPRQN
Trigger: GTTCTGCCGGGGAGGCCCTCACCTTCCAGAGAGGAC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTGGCAGTTCATCCCCGTaGGCCGCATCTGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPGSSSP*AASAHS
Trigger: TGAGTGGGCAGATGCGGCGCACGGGGATGAACTGCC...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGGCGGTCATAGGCCCTTaGGCCGGGCTCGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVAVIGP*AGLGLG
Trigger: CCCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGC...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGGAAATGGGAGAAGGTaGAGGCAGGCCCGACCTGCG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGGNGRR*RQARPA
Trigger: CGCAGGTCGGGCCTGCCTTCACCTTCTCCCATTTCC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGCGGAACCAAAGATGGTaGTACGCTCGGGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGRNQRW*YARGRP
Trigger: GGGGCGACCCCGAGCGTATCACCATCTTTGGTTCCG...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGCAGGGTGGTGGCGTTaGGCACGCCGGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGAGWWR*ARRATR
Trigger: CCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCACCCGTGCGCCGCATCTaGCCACTCAGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPPVRRI*PLRPAL
Trigger: GAGGGCCGGCCTGAGTGGGCAGATGCGGCGCACGGG...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGTCGGCGTGCAGCTTaGCAGTGGCCACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGSRRAA*QWPQLV
Trigger: CACCAGCTGTGGCCACTGCCAAGCTGCACGCCGACT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGGAGGGTGGTCAGCTaGGGAGAAGGCTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGRRVVS*GEGWSD
Trigger: GTCAGACCAGCCTTCTCCTCAGCTGACCACCCTCCT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGAGGCACATCGTCCGGTaGCCGGCGCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRRHIVR*PAQGQG
Trigger: ACCCTGGCCCTGCGCCGGGCACCGGACGATGTGCCT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAAGGCACATCGTCCGGTaGCCGGCGCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPRHIVR*PAQGQG
Trigger: ACCCTGGCCCTGCGCCGGGCACCGGACGATGTGCCT...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTAAGAGAGGGGCCGTCTaGCTGGGGAAACACACATCC +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPKRGAV*LGKHTS
Trigger: GGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTT...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGCAGACCAGCTGGAAATaGCGGTGCCACTCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGQTSWK*RCHSGR
Trigger: TCGCCCAGAGTGGCACCGCCATTTCCAGCTGGTCTG...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAGCGGTCATAGGCCCTTaGGCCGGGCTCGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLEAVIGP*AGLGLG
Trigger: CCCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGC...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGCAGCTCCTCCTCTGGTaGCAGCTCACGGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRQLLLW*QLTARG
Trigger: GCCGCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTG...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTTCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGTCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATTCCCTGCCTTCGGAGTaGCCGGGCCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHSLPSE*PGQGGP
Trigger: CGGCCCTCCCTGGCCCGGCCACTCCGAAGGCAGGGA...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTAGGCTCCATCCTCTGTaGTCTGGTGGCCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPRLHPL*SGGQGS
Trigger: TGACCCTTGGCCACCAGACCACAGAGGATGGAGCCT...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGATTGAGGATCCGCTaGTTCCGTGGGCCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGRLRIR*FRGPAS
Trigger: CGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAACCACACAGGCAGCATaGTGGCGGGCAGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQTTQAA*WRAAPR
Trigger: ACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTGGT...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTCTGGAACAGCCCTTCTaGATGGTGGGAGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPLEQPF*MVGEDQ
Trigger: CTGATCCTCTCCCACCATTCAGAAGGGCTGTTCCAG...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCACGTGGAGTAGTCCCGTaGGTCCCCGGGGAAGCGGTC +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPRGVVP*VPGEAV
Trigger: GACCGCTTCCCCGGGGACTCACGGGACTACTCCACG...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCAGGCACGCCAGAGCCTaGGCCGCCAGGTGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPRHARA*AARWAK
Trigger: CTTAGCCCACCTGGCGGCTCAGGCTCTGGCGTGCCT...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGCGCCAGCAGGGTTTTaGGGCGCATTTCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGAPAGF*GAFRHC
Trigger: ACAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTCCCGTGCGCCGCATCTaGCCACTCAGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTPVRRI*PLRPAL
Trigger: GAGGGCCGGCCTGAGTGGGCAGATGCGGCGCACGGG...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCCCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAGCAGGCTGCACGTCCTaGTCCACCAGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQAGCTS*STSSRE
Trigger: CTCCCGGGAGCTGGTGGACCAGGACGTGCAGCCTGC...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAGCAGGCTGCACGTCCTaGTCCACCAGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPAGCTS*STSSRE
Trigger: CTCCCGGGAGCTGGTGGACCAGGACGTGCAGCCTGC...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGTTGAGGCCCTCTCCCTaGTTGACGCCGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGLRPSP*LTPMSM
Trigger: CATGCTCATCGGCGTCAACCAGGGAGAGGGCCTCAA...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGAGGGGAAGAGGTCGGTaGCACCCACCATGGGCACGC +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVRGRGR*HPPWAR
Trigger: GCGTGCCCATGGTGGGTGCCACCGACCTCTTCCCCT...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAGCGGCACCGGCTGGTTaGGGTCCCCAGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPAAPAG*GPQSWR
Trigger: TCGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGC...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTCCTGCGGCACCGGCTaGTTGGGGTCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVSCGTG*LGSPVL
Trigger: CAAGACTGGGGACCCCAACCAGCCGGTGCCGCAGGA...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGTTGTCACGCACGCGTaGCTTCAGGCCTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGVVTHA*LQAYVQ
Trigger: CTGCACATAGGCCTGAAGCCACGCGTGCGTGACAAC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATCAGCTCCTCCTCTGGTaGCAGCTCACGGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHQLLLW*QLTARG
Trigger: GCCGCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTG...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCAGCTCCTCCTCTGGTaGCAGCTCACGGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTQLLLW*QLTARG
Trigger: GCCGCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGCTGGGCTTCTCTGCGTaGGAAAGACACGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGLGFSA*ERHASQ
Trigger: CTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAG...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGCAATGCTCTGAGGCCTaGGGAAAAGGCTGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGQCSEA*GKGCPR
Trigger: CCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTG...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCCCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGC +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLPGSRC*ARAAHR
Trigger: GCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGG...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTACCACACAGGCAGCATaGTGGCGGGCAGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPTTQAA*WRAAPR
Trigger: ACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTGGT...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGAGAGGATCAGAAGGTTaGCGCAGGAGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVRGSEG*RRRPLP
Trigger: GGGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCT...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGGCGCGTGGTGGTGGTaGAGAGCTCCGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGGAWWW*RAPCAG
Trigger: ACCTGCACACGGAGCTCTTCACCACCACCACGCGCC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGTGGAGTAGTCCCGTaGGTCCCCGGGGAAGCGGTC +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTRGVVP*VPGEAV
Trigger: GACCGCTTCCCCGGGGACTCACGGGACTACTCCACG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAAGGCACGCCAGAGCCTaGGCCGCCAGGTGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLERHARA*AARWAK
Trigger: CTTAGCCCACCTGGCGGCTCAGGCTCTGGCGTGCCT...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGGTCCTCTCTGGAAGGTaGGGGCCTCCCCGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGREVLSGR*GPPRQN
Trigger: GTTCTGCCGGGGAGGCCCTCACCTTCCAGAGAGGAC...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGACCGTCCTCGCTCTCTaGAGAGTCCTCCACGAACTT +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGTVLAL*RVLHEL
Trigger: AAGTTCGTGGAGGACTCTGCAGAGAGCGAGGACGGT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCACCCGTGCGCCGCATCTaGCCACTCAGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPPVRRI*PLRPAL
Trigger: GAGGGCCGGCCTGAGTGGGCAGATGCGGCGCACGGG...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGGGCAGTTCATCCCCGTaGGCCGCATCTGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVGSSSP*AASAHS
Trigger: TGAGTGGGCAGATGCGGCGCACGGGGATGAACTGCC...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGAGGCACATCGTCCGGTaGCCGGCGCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLRHIVR*PAQGQG
Trigger: ACCCTGGCCCTGCGCCGGGCACCGGACGATGTGCCT...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGCCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACACAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTQAASG*VDSSLP
Trigger: GGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTG...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGGGAGCCCCCTCACCTaGCACATCCCTCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGGSPLT*HIPRPV
Trigger: TACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGGTCACAGCCCACCTTaGCTGCCAGCAGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRGHSPP*LPAAAC
Trigger: ACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACC...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCGGTCACAGCCCACCTTaGCTGCCAGCAGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLGHSPP*LPAAAC
Trigger: ACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACC...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGGTCACAGCCCACCTTaGCTGCCAGCAGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGGHSPP*LPAAAC
Trigger: ACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTGCAGGCTGCACGTCCTaGTCCACCAGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPAGCTS*STSSRE
Trigger: CTCCCGGGAGCTGGTGGACCAGGACGTGCAGCCTGC...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAGCAGGCTGCACGTCCTaGTCCACCAGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEAGCTS*STSSRE
Trigger: CTCCCGGGAGCTGGTGGACCAGGACGTGCAGCCTGC...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGGGCAGTGGCCACAGCTaGTGCCACCCATTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVGSGHS*CHPLVV
Trigger: GACCACCAATGGGTGGCACCAGCTGTGGCCACTGCC...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGCGTGCAGCTTGGCAGTaGCCACAGCTGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRERAAWQ*PQLVPP
Trigger: GGGTGGCACCAGCTGTGGCCACTGCCAAGCTGCACG...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGGCGGCACCGGCTGGTTaGGGTCCCCAGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEAAPAG*GPQSWR
Trigger: TCGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGC...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCTCCTGCGGCACCGGCTaGTTGGGGTCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLSCGTG*LGSPVL
Trigger: CAAGACTGGGGACCCCAACCAGCCGGTGCCGCAGGA...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGAAGGCCACCTTGTTaGCGCGGTAGTTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGRRPPC*RGSCHA
Trigger: TGCGTGACAACTACCGCGCCAACAAGGTGGCCTTCT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTGCGGTCATAGGCCCTTaGGCCGGGCTCGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLAVIGP*AGLGLG
Trigger: CCCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGC...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGCGGTCATAGGCCCTTaGGCCGGGCTCGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASAVIGP*AGLGLG
Trigger: CCCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGC...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAACACCAGCTCCTCCTCTaGTGGCAGCTCACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PAHGKTHPVVRKHTSTREHQLLL*WQLTAR
Trigger: GCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTGGTG...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGCACCAGCTCCTCCTCTaGTGGCAGCTCACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEHQLLL*WQLTAR
Trigger: GCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTGGTG...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGTGTTGTTGTGGCTGGTaGCGGTGGGAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGCCCGW*RWEGAG
Trigger: CCCCGCCCCCTCCCACCGCCACCAGCCACAACAACA...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGGACCTGGCTCAGCCCTaGGGCCGTGGTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGDLAQP*GRGASI
Trigger: GATGGAGGCACCACGGCCCCAGGGCTGAGCCAGGTC...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGACCACACAGGCAGCATaGTGGCGGGCAGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLTTQAA*WRAAPR
Trigger: ACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTGGT...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTCGTGGAGTAGTCCCGTaGGTCCCCGGGGAAGCGGTC +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTRGVVP*VPGEAV
Trigger: GACCGCTTCCCCGGGGACTCACGGGACTACTCCACG...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGAGGCACGCCAGAGCCTaGGCCGCCAGGTGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLRHARA*AARWAK
Trigger: CTTAGCCCACCTGGCGGCTCAGGCTCTGGCGTGCCT...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp AGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGAGTCCTCTCTGGAAGGTaGGGGCCTCCCCGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLARMSNALRPGEKAVLGVLSGR*GPPRQN
Trigger: GTTCTGCCGGGGAGGCCCTCACCTTCCAGAGAGGAC...TCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCTCTCTGGAAGGTaGGGGCCTCCCCGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHVLSGR*GPPRQN
Trigger: GTTCTGCCGGGGAGGCCCTCACCTTCCAGAGAGGAC...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGGTTCCCCAGCACCGCTaGCCTCATTCTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVVPQHR*PHSPNL
Trigger: CAGGTTGGGAGAATGAGGTCAGCGGTGCTGGGGAAC...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAGGAAATGGGAGAAGGTaGAGGCAGGCCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPGNGRR*RQARPG
Trigger: GCCAGGTCGGGCCTGCCTTCACCTTCTCCCATTTCC...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCGGAAATGGGAGAAGGTaGAGGCAGGCCCGACCTGGC +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLGNGRR*RQARPG
Trigger: GCCAGGTCGGGCCTGCCTTCACCTTCTCCCATTTCC...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR GCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGGGCACGCCCAAGAACTaGACGACGGGGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWGTPKN*TTGPRI
Trigger: GATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGTGCC...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTGGCACGCCCAAGAACTaGACGACGGGGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLGTPKN*TTGPRI
Trigger: GATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGTGCC...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAAGCTGGAAATGGCGGTaGCACTCTGGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTSWKWR*HSGRWP
Trigger: AGGCCATCGCCCAGAGTGGCACCGCCATTTCCAGCT...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAACAGCCCACCTTGGCTaGCAGCAGCCGCGTGTACTT +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTTAHLG*QQPRVL
Trigger: AAGTACACGCGGCTGCTGGCAGCCAAGGTGGGCTGT...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATCCCGTGCGCCGCATCTaGCCACTCAGGCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QMPKPKALRGVTSHISNYPVRRI*PLRPAL
Trigger: GAGGGCCGGCCTGAGTGGGCAGATGCGGCGCACGGG...ATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGCCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGTGCAGCTTGGCAGTaGCCACAGCTGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTRAAWQ*PQLVPP
Trigger: GGGTGGCACCAGCTGTGGCCACTGCCAAGCTGCACG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGCGTGCAGCTTGGCAGTaGCCACAGCTGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGRAAWQ*PQLVPP
Trigger: GGGTGGCACCAGCTGTGGCCACTGCCAAGCTGCACG...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCGTGCAGCTTGGCAGTaGCCACAGCTGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPRAAWQ*PQLVPP
Trigger: GGGTGGCACCAGCTGTGGCCACTGCCAAGCTGCACG...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGTCGGCGTGCAGCTTaGCAGTGGCCACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRESRRAA*QWPQLV
Trigger: CACCAGCTGTGGCCACTGCCAAGCTGCACGCCGACT...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGCGGTGGCACCCACCATaGGCACGCCAAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVRWHPP*ARQRHR
Trigger: CCTATGTCTTTGGCGTGCCCATGGTGGGTGCCACCG...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGGGGAAGAGGTCGGTaGCACCCACCATGGGCACGC +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLRGRGR*HPPWAR
Trigger: GCGTGCCCATGGTGGGTGCCACCGACCTCTTCCCCT...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGATCCTGCGGCACCGGCTaGTTGGGGTCCCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLARMSNALRPGEKAVLGSCGTG*LGSPVL
Trigger: CAAGACTGGGGACCCCAACCAGCCGGTGCCGCAGGA...TCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCTGCAGGTTGTGCAGGTaGGGCACGAGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGCRLCR*GTSSSQ
Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCA...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCACAGCTCCTCCTCTGGTaGCAGCTCACGGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPQLLLW*QLTARG
Trigger: GCCGCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTG...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGACCCGAGTGGTGGAGTaGGGGTGGGGTAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRETRVVE*GWGSVL
Trigger: CAACACGCTACCCCACCCCCACTCCACCACTCGGGT...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACATGTGTCTGTCCTCTCTaGAAGGTGAGGGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTCVCPL*KVRASP
Trigger: CGGGGAGGCCCTCACCTTCCAGAGAGGACAGACACA...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAACAGCATCAGGATGCGTaGACTCCTCCCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQQHQDA*TPPSPS
Trigger: GCTGGGGGAGGGAGGAGTCCACGCATCCTGATGCTG...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTTGCCCTGCCTGGGACTaGGAAATTCTTGGCACATTT +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPCPAWD*EILGTF
Trigger: AAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCA...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCGACAAGGAGGGGGCGTaGGTCAGAGGAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPDKEGA*VRGGWS
Trigger: TGACCACCCTCCTCTGACCCACGCCCCCTCCTTGTC...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CAGGCGGGAGCCCCCTCACCTGCCACATCCCTCGCCCTGTATCCTGCTTGCCCTCAGGGATTCTGGATTTaGGTGTCAGTGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: QAGAPSPATSLALYPACPQGFWI*VSVEDS
Trigger: GCTGTCTTCCACTGACACCCAAATCCAGAATCCCTG...AGGGCAAGCAGGATACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAGGGCATTGGAGTCCGTaGCTGAATCATGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTGHWSP*LNHGVP
Trigger: GGGGACCCCATGATTCAGCCACGGACTCCAATGCCC...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGAGGAGCTGGGCATTaGAGTCCGTGGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGRGAGH*SPWLNH
Trigger: ATGATTCAGCCACGGACTCCAATGCCCAGCTCCTCT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCAGGAGAGCTAGGGGATaGGATCAGGGGGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLRRARG*DQGEPE
Trigger: CTCGGGCTCCCCCTGATCCCATCCCCTAGCTCTCCT...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAGGGCGATGTTTTCACTaGGCCAGCGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PAHGKTHPVVRKHTSTREGRCFH*ASAGPG
Trigger: TCCAGGCCCTGCGCTGGCTCAGTGAAAACATCGCCC...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTGGGCGATGTTTTCACTaGGCCAGCGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLGRCFH*ASAGPG
Trigger: TCCAGGCCCTGCGCTGGCTCAGTGAAAACATCGCCC...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACGGAACCAAAGATGGTaGTACGCTCGGGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLARMSNALRPGEKAVLGRNQRW*YARGRP
Trigger: GGGGCGACCCCGAGCGTATCACCATCTTTGGTTCCG...TCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTAGAGGATCAGAAGGTTaGCGCAGGAGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPRGSEG*RRRPLP
Trigger: GGGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCT...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCACGTGGAGTAGTCCCGTaGGTCCCCGGGGAAGCGGTC +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPRGVVP*VPGEAV
Trigger: GACCGCTTCCCCGGGGACTCACGGGACTACTCCACG...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAAGGCACGCCAGAGCCTaGGCCGCCAGGTGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRRHARA*AARWAK
Trigger: CTTAGCCCACCTGGCGGCTCAGGCTCTGGCGTGCCT...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCTGCTCACCTGCCATGTaGGGAGGAACTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGCSPAM*GGTGCW
Trigger: CCAGCACCCAGTTCCTCCTCACATGGCAGGTGAGCA...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGCCCATGCCCCAATTCTaGGGGCATCTGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVPMPQF*GHLSTG
Trigger: CCCTGTAGACAGATGCCCTCAGAATTGGGGCATGGG...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAAGCTGGAAATGGCGGTaGCACTCTGGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPSWKWR*HSGRWP
Trigger: AGGCCATCGCCCAGAGTGGCACCGCCATTTCCAGCT...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCAGCTGGAAATGGCGGTaGCACTCTGGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPSWKWR*HSGRWP
Trigger: AGGCCATCGCCCAGAGTGGCACCGCCATTTCCAGCT...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCACAGCCCACCTTGGCTaGCAGCAGCCGCGTGTACTT +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPTAHLG*QQPRVL
Trigger: AAGTACACGCGGCTGCTGGCAGCCAAGGTGGGCTGT...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAGGCAGTTCATCCCCGTaGGCCGCATCTGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEGSSSP*AASAHS
Trigger: TGAGTGGGCAGATGCGGCGCACGGGGATGAACTGCC...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGTCCGTGTGCAGGTTGTaGAGGTGGGGCACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWSVCRL*RWGTSS
Trigger: GGAGCTCGTGCCCCACCTGCACAACCTGCACACGGA...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGAAGAGCTCCGTGTaGAGGTTGTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGVKSSV*RLCRWG
Trigger: GCCCCACCTGCACAACCTGCACACGGAGCTCTTCAC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCACCAAGTCCTCCTCCCTaGCTTCGGAGTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASPSPPP*LRSGRA
Trigger: GGCCCGGCCACTCCGAAGGCAGGGAGGAGGACTTGG...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTCAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLQAASG*VDSSLP
Trigger: GGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTG...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGAAGAGAGGGGCCGTCTaGCTGGGGAAACACACATCC +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVKRGAV*LGKHTS
Trigger: GGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTT...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCGCCCTTAGTTTCCCCTaGCCTGCCTGGGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPALSFP*PAWDWE
Trigger: TTCCCAGTCCCAGGCAGGGCAGGGGAAACTAAGGGC...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGAAGCCCTGTCCCCACTaGCCCCTCCATCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWKPCPH*PLHLFP
Trigger: GGGGAACAGATGGAGGGGGCAGTGGGGACAGGGCTT...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGGCAGTGGCCACAGCTaGTGCCACCCATTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHGSGHS*CHPLVV
Trigger: GACCACCAATGGGTGGCACCAGCTGTGGCCACTGCC...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGCGGTGGCACCCACCATaGGCACGCCAAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRERWHPP*ARQRHR
Trigger: CCTATGTCTTTGGCGTGCCCATGGTGGGTGCCACCG...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCAAGGGGAAGAGGTCGGTaGCACCCACCATGGGCACGC +
Preference number: 4 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSRGRGR*HPPWAR
Trigger: GCGTGCCCATGGTGGGTGCCACCGACCTCTTCCCCT...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTGCGGCACCGGCTGGTTaGGGTCCCCAGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLAAPAG*GPQSWR
Trigger: TCGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGC...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAATGCAGGTTGTGCAGGTaGGGCACGAGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PAHGKTHPVVRKHTSTRECRLCR*GTSSSQ
Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCA...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGTGCAGGTTGTGCAGGTaGGGCACGAGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWCRLCR*GTSSSQ
Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCA...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCACCAGCTCCTCCTCTaGTGGCAGCTCACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWHQLLL*WQLTAR
Trigger: GCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTGGTG...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGTTGTTGTGGCTGGTaGCGGTGGGAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGCCCGW*RWEGAG
Trigger: CCCCGCCCCCTCCCACCGCCACCAGCCACAACAACA...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGTGTTGTTGTGGCTGGTaGCGGTGGGAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWCCCGW*RWEGAG
Trigger: CCCCGCCCCCTCCCACCGCCACCAGCCACAACAACA...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAGTGGTGGAGTGGGGGTaGGGTAGCGTGTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQVVEWG*GSVLLW
Trigger: CCACAACAACACGCTACCCCACCCCCACTCCACCAC...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGTGGTGGAGTGGGGGTaGGGTAGCGTGTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRVVEWG*GSVLLW
Trigger: CCACAACAACACGCTACCCCACCCCCACTCCACCAC...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGACCCGAGTGGTGGAGTaGGGGTGGGGTAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGTRVVE*GWGSVL
Trigger: CAACACGCTACCCCACCCCCACTCCACCACTCGGGT...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCCTATACCCGAGTGGTaGAGTGGGGGTGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWPIPEW*SGGGVA
Trigger: CGCTACCCCACCCCCACTCCACCACTCGGGTATAGG...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTATACCCGAGTGGTaGAGTGGGGGTGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPPIPEW*SGGGVA
Trigger: CGCTACCCCACCCCCACTCCACCACTCGGGTATAGG...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTATACCCGAGTGGTaGAGTGGGGGTGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEPIPEW*SGGGVA
Trigger: CGCTACCCCACCCCCACTCCACCACTCGGGTATAGG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGAGGTGGGAGAAGGGATaGGGGAACAGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVRWEKG*GNRILG
Trigger: CCCCAGAATCCTGTTCCCCCATCCCTTCTCCCACCT...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATCAGCATCAGGATGCGTaGACTCCTCCCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHQHQDA*TPPSPS
Trigger: GCTGGGGGAGGGAGGAGTCCACGCATCCTGATGCTG...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGCAGCATCAGGATGCGTaGACTCCTCCCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLQHQDA*TPPSPS
Trigger: GCTGGGGGAGGGAGGAGTCCACGCATCCTGATGCTG...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGTGCCCTGCCTGGGACTaGGAAATTCTTGGCACATTT +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGCPAWD*EILGTF
Trigger: AAATGTGCCAAGAATTTCCCAGTCCCAGGCAGGGCA...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTGACAAGGAGGGGGCGTaGGTCAGAGGAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLDKEGA*VRGGWS
Trigger: TGACCACCCTCCTCTGACCCACGCCCCCTCCTTGTC...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTTTGGGGAGAGGAGCTaGGCATTGGAGTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVFGERS*ALESVA
Trigger: AGCCACGGACTCCAATGCCCAGCTCCTCTCCCCAAA...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGATCAGCCCTGGGGCCGTaGTGCCTCCATCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRSALGP*CLHPGL
Trigger: GAGCCCTGGATGGAGGCACCACGGCCCCAGGGCTGA...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGGACCTGGCTCAGCCCTaGGGCCGTGGTGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWDLAQP*GRGASI
Trigger: GATGGAGGCACCACGGCCCCAGGGCTGAGCCAGGTC...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGACCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGC +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGPGSRC*ARAAHR
Trigger: GCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGG...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGCCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGC +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRPGSRC*ARAAHR
Trigger: GCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGG...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAACTGTGTCTGGCGGATTaGGCGTCGCCTCGTCACGTT +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLELCLAD*ASPRHV
Trigger: AACGTGACGAGGCGACGCTCAATCCGCCAGACACAG...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCTGTGTCTGGCGGATTaGGCGTCGCCTCGTCACGTT +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWLCLAD*ASPRHV
Trigger: AACGTGACGAGGCGACGCTCAATCCGCCAGACACAG...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGCTGTGTCTGGCGGATTaGGCGTCGCCTCGTCACGTT +
Preference number: 4 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGELCLAD*ASPRHV
Trigger: AACGTGACGAGGCGACGCTCAATCCGCCAGACACAG...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGCGGAACCAAAGATGGTaGTACGCTCGGGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLRNQRW*YARGRP
Trigger: GGGGCGACCCCGAGCGTATCACCATCTTTGGTTCCG...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGGCGCGTGGTGGTGGTaGAGAGCTCCGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPGAWWW*RAPCAG
Trigger: ACCTGCACACGGAGCTCTTCACCACCACCACGCGCC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACACTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTLLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CCTACCCAGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTTGCTCACCTGCCATGTaGGGAGGAACTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTQFGTDEQCSEAWGKGCCSPAM*GGTGCW
Trigger: CCAGCACCCAGTTCCTCCTCACATGGCAGGTGAGCA...ACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGTGCTCACCTGCCATGTaGGGAGGAACTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTCSPAM*GGTGCW
Trigger: CCAGCACCCAGTTCCTCCTCACATGGCAGGTGAGCA...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTTGCTCACCTGCCATGTaGGGAGGAACTGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPCSPAM*GGTGCW
Trigger: CCAGCACCCAGTTCCTCCTCACATGGCAGGTGAGCA...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGATTGGAGTCCGTGGCTaGATCATGGGGTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLIGVRG*IMGSPS
Trigger: GCTGGGGGACCCCATGATTCAGCCACGGACTCCAAT...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGGCACGCCCAAGAACTaGACGACGGGGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPGTPKN*TTGPRI
Trigger: GATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGTGCC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAGGCACGCCCAAGAACTaGACGACGGGGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTGTPKN*TTGPRI
Trigger: GATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGTGCC...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAAGCTGGAAATGGCGGTaGCACTCTGGGCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLESWKWR*HSGRWP
Trigger: AGGCCATCGCCCAGAGTGGCACCGCCATTTCCAGCT...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAGCGCCAGCAGGGTTTTaGGGCGCATTTCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPAPAGF*GAFRHC
Trigger: ACAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGC...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGCGCCAGCAGGGTTTTaGGGCGCATTTCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGAPAGF*GAFRHC
Trigger: ACAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCGTGTGCAGGTTGTaGAGGTGGGGCACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTSVCRL*RWGTSS
Trigger: GGAGCTCGTGCCCCACCTGCACAACCTGCACACGGA...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGTCCGTGTGCAGGTTGTaGAGGTGGGGCACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLSVCRL*RWGTSS
Trigger: GGAGCTCGTGCCCCACCTGCACAACCTGCACACGGA...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTGTGAAGAGCTCCGTGTaGAGGTTGTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPVKSSV*RLCRWG
Trigger: GCCCCACCTGCACAACCTGCACACGGAGCTCTTCAC...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATAGGCACATCGTCCGGTaGCCGGCGCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDRHIVR*PAQGQG
Trigger: ACCCTGGCCCTGCGCCGGGCACCGGACGATGTGCCT...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGAAGAGAGGGGCCGTCTaGCTGGGGAAACACACATCC +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRKRGAV*LGKHTS
Trigger: GGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGGAGCCCCCTCACCTaGCACATCCCTCGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASGSPLT*HIPRPV
Trigger: TACAGGGCGAGGGATGTGGCAGGTGAGGGGGCTCCC...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGCAAGGGAAATTGGATaGGGCAGACAGAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGAREIG*GRQKGM
Trigger: CATTCCTTTCTGTCTGCCCCATCCAATTTCCCTTGC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGGGTCGCCCCCAAAGTaGGCGATGTTTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRGSPPK*AMFSLS
Trigger: GCTCAGTGAAAACATCGCCCACTTTGGGGGCGACCC...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGTGCCACTCTGGGCGATaGCCTTCTGGAACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRCHSGR*PSGTAL
Trigger: AAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCA...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGTCACAGCCCACCTTaGCTGCCAGCAGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASGHSPP*LPAAAC
Trigger: ACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACC...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTAGTCGGCGTGCAGCTTaGCAGTGGCCACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTSRRAA*QWPQLV
Trigger: CACCAGCTGTGGCCACTGCCAAGCTGCACGCCGACT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGTGGCACCCACCATaGGCACGCCAAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTRWHPP*ARQRHR
Trigger: CCTATGTCTTTGGCGTGCCCATGGTGGGTGCCACCG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAAGGGGAAGAGGTCGGTaGCACCCACCATGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGRGRGR*HPPWAR
Trigger: GCGTGCCCATGGTGGGTGCCACCGACCTCTTCCCCT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGGTTGTCACGCACGCGTaGCTTCAGGCCTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGREVVTHA*LQAYVQ
Trigger: CTGCACATAGGCCTGAAGCCACGCGTGCGTGACAAC...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAGTGGTGGAGTGGGGGTaGGGTAGCGTGTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEVVEWG*GSVLLW
Trigger: CCACAACAACACGCTACCCCACCCCCACTCCACCAC...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTGGTGGAGTGGGGGTaGGGTAGCGTGTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHVVEWG*GSVLLW
Trigger: CCACAACAACACGCTACCCCACCCCCACTCCACCAC...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCCTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPLSAAG*RVTTPQ
Trigger: CTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAG...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCCTGGGCTTCTCTGCGTaGGAAAGACACGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPLGFSA*ERHASQ
Trigger: CTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAG...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAAGGTGGGAGAAGGGATaGGGGAACAGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQRWEKG*GNRILG
Trigger: CCCCAGAATCCTGTTCCCCCATCCCTTCTCCCACCT...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGTGTGTCTGTCCTCTCTaGAAGGTGAGGGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGCVCPL*KVRASP
Trigger: CGGGGAGGCCCTCACCTTCCAGAGAGGACAGACACA...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGCAGAGAAATGCGTCCTaGCCACGGGAAAATAAGCTT +
Preference number: 4 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGQRNAS*PRENKL
Trigger: AAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTG...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGGATCCGCTGGTTCCGTaGGCCGGCTTCGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRDPLVP*AGFEGP
Trigger: TGGTCCCTCGAAGCCGGCCCACGGAACCAGCGGATC...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAGATCCGCTGGTTCCGTaGGCCGGCTTCGAGGGACCA +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRDPLVP*AGFEGP
Trigger: TGGTCCCTCGAAGCCGGCCCACGGAACCAGCGGATC...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAATCCAGGGCTCCGAGTaGGGGGCGAAAGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGIQGSE*GAKGLR
Trigger: CCGAAGGCCTTTCGCCCCCCACTCGGAGCCCTGGAT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAATCCAGGGCTCCGAGTaGGGGGCGAAAGGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRIQGSE*GAKGLR
Trigger: CCGAAGGCCTTTCGCCCCCCACTCGGAGCCCTGGAT...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTTCAGCCCTGGGGCCGTaGTGCCTCCATCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTSALGP*CLHPGL
Trigger: GAGCCCTGGATGGAGGCACCACGGCCCCAGGGCTGA...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGCGATGTTTTCACTaGGCCAGCGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPGRCFH*ASAGPG
Trigger: TCCAGGCCCTGCGCTGGCTCAGTGAAAACATCGCCC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCGGAACCAAAGATGGTaGTACGCTCGGGGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLRNQRW*YARGRP
Trigger: GGGGCGACCCCGAGCGTATCACCATCTTTGGTTCCG...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAAGAGGATCAGAAGGTTaGCGCAGGAGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASRGSEG*RRRPLP
Trigger: GGGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCT...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAAGAGGATCAGAAGGTTaGCGCAGGAGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGRGSEG*RRRPLP
Trigger: GGGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCGCGTGGTGGTGGTaGAGAGCTCCGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTGAWWW*RAPCAG
Trigger: ACCTGCACACGGAGCTCTTCACCACCACCACGCGCC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCCTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGLLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGAAACACACCCCGTTGTaGGAAAGCACACCTCCACGC +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRKHTPL*ESTPPR
Trigger: GCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCCCATGCCCCAATTCTaGGGGCATCTGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWPMPQF*GHLSTG
Trigger: CCCTGTAGACAGATGCCCTCAGAATTGGGGCATGGG...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCAACAGCCCACCTTGGCTaGCAGCAGCCGCGTGTACTT +
Preference number: 4 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSTAHLG*QQPRVL
Trigger: AAGTACACGCGGCTGCTGGCAGCCAAGGTGGGCTGT...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAGGCAGTTCATCCCCGTaGGCCGCATCTGCCCACTCA +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRGSSSP*AASAHS
Trigger: TGAGTGGGCAGATGCGGCGCACGGGGATGAACTGCC...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTTCCGTGTGCAGGTTGTaGAGGTGGGGCACGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLSVCRL*RWGTSS
Trigger: GGAGCTCGTGCCCCACCTGCACAACCTGCACACGGA...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCAGGAGAAAAGCCAGTTaGCAAGTCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLRRKAS*QVLLPA
Trigger: GGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCT...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGREETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCGAGACTGGGCTTCTCTaGGTGGGAAAGACACGCATC +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLETGLL*VGKTRI
Trigger: GATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTC...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTQAASG*VDSSLP
Trigger: GGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTG...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCAGGCAGCATCAGGATaGGTGGACTCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWQAASG*VDSSLP
Trigger: GGGGAGGGAGGAGTCCACGCATCCTGATGCTGCCTG...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGGGCACGGATGAGCAATaGTCTGAGGCCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGREGTDEQ*SEAWGK
Trigger: TTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAATTCCTGCTGGTGTCTaGCCAAGCCCTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEIPAGV*PSPVPT
Trigger: AGTGGGGACAGGGCTTGGGCAGACACCAGCAGGAAT...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCGGTTGGGGAGGGACCTaGGTTAGACTGGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLGWGGT*VRLDRE
Trigger: TTCTCTGTCCAGTCTAACCCAGGTCCCTCCCCAACC...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAACGGATATCTGTGTCTaGCGGATTGAGCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPTDICV*RIERRL
Trigger: GAGGCGACGCTCAATCCGCCAGACACAGATATCCGT...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAGGGTCGCCCCCAAAGTaGGCGATGTTTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEGSPPK*AMFSLS
Trigger: GCTCAGTGAAAACATCGCCCACTTTGGGGGCGACCC...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGTGGGCGATGGCCTTCTaGAACAGCCCTTCTGAATGG +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRWAMAF*NSPSEW
Trigger: CCATTCAGAAGGGCTGTTCCAGAAGGCCATCGCCCA...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGTGCCACTCTGGGCGATaGCCTTCTGGAACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGCHSGR*PSGTAL
Trigger: AAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCA...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGCAGACCAGCTGGAAATaGCGGTGCCACTCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLQTSWK*RCHSGR
Trigger: TCGCCCAGAGTGGCACCGCCATTTCCAGCTGGTCTG...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGATTGAGGCCCTCTCCCTaGTTGACGCCGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: SLARMSNALRPGEKAVLGLRPSP*LTPMSM
Trigger: CATGCTCATCGGCGTCAACCAGGGAGAGGGCCTCAA...TCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAATTGAGGCCCTCTCCCTaGTTGACGCCGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQELRPSP*LTPMSM
Trigger: CATGCTCATCGGCGTCAACCAGGGAGAGGGCCTCAA...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAGGCAGTGGCCACAGCTaGTGCCACCCATTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRGSGHS*CHPLVV
Trigger: GACCACCAATGGGTGGCACCAGCTGTGGCCACTGCC...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAAGTCGGCGTGCAGCTTaGCAGTGGCCACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPSRRAA*QWPQLV
Trigger: CACCAGCTGTGGCCACTGCCAAGCTGCACGCCGACT...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATGCGGCACCGGCTGGTTaGGGTCCCCAGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDAAPAG*GPQSWR
Trigger: TCGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGC...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGGTTGTCACGCACGCGTaGCTTCAGGCCTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEVVTHA*LQAYVQ
Trigger: CTGCACATAGGCCTGAAGCCACGCGTGCGTGACAAC...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGAAGGCCACCTTGTTaGCGCGGTAGTTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRERRPPC*RGSCHA
Trigger: TGCGTGACAACTACCGCGCCAACAAGGTGGCCTTCT...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGTGCAGGTTGTGCAGGTaGGGCACGAGCTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWCRLCR*GTSSSQ
Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCA...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATTGTTGTTGTGGCTGGTaGCGGTGGGAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDCCCGW*RWEGAG
Trigger: CCCCGCCCCCTCCCACCGCCACCAGCCACAACAACA...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGACCCGAGTGGTGGAGTaGGGGTGGGGTAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWTRVVE*GWGSVL
Trigger: CAACACGCTACCCCACCCCCACTCCACCACTCGGGT...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWLSAAG*RVTTPQ
Trigger: CTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAG...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: SLARMSNALRPGEKAVLGLSAAG*RVTTPQ
Trigger: CTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAG...TCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGCTGGGCTTCTCTGCGTaGGAAAGACACGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWLGFSA*ERHASQ
Trigger: CTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAG...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAACTGGGCTTCTCTGCGTaGGAAAGACACGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLELGFSA*ERHASQ
Trigger: CTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAG...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAGGTGGGAGAAGGGATaGGGGAACAGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAHGKTHPVVRKHTSTRERWEKG*GNRILG
Trigger: CCCCAGAATCCTGTTCCCCCATCCCTTCTCCCACCT...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGGCTCCATCCTCTGTaGTCTGGTGGCCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLRLHPL*SGGQGS
Trigger: TGACCCTTGGCCACCAGACCACAGAGGATGGAGCCT...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGACAGCATCAGGATGCGTaGACTCCTCCCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRQHQDA*TPPSPS
Trigger: GCTGGGGGAGGGAGGAGTCCACGCATCCTGATGCTG...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGGAGGGGCCGTCTGCCTaGGGAAACACACATCCACAT +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWEGPSA*GNTHPH
Trigger: ATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTC...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAGAGGGGCCGTCTGCCTaGGGAAACACACATCCACAT +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLEEGPSA*GNTHPH
Trigger: ATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTC...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCAATGCTCTGAGGCCTaGGGAAAAGGCTGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWQCSEA*GKGCPR
Trigger: CCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTG...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGTTCCCCTGCCCTGCCTaGGACTGGGAAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWFPCPA*DWEILG
Trigger: GCCAAGAATTTCCCAGTCCCAGGCAGGGCAGGGGAA...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGTTCCCCTGCCCTGCCTaGGACTGGGAAATTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTFPCPA*DWEILG
Trigger: GCCAAGAATTTCCCAGTCCCAGGCAGGGCAGGGGAA...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGGATTTGGGTGTCAGTaGAAGACAGCACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHGFGCQ*KTAPQP
Trigger: GGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCC...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAAGGAGAGCTAGGGGATaGGATCAGGGGGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTRRARG*DQGEPE
Trigger: CTCGGGCTCCCCCTGATCCCATCCCCTAGCTCTCCT...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGAAATGGGAGAAGGTaGAGGCAGGCCCGACCTGCG +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTGNGRR*RQARPA
Trigger: CGCAGGTCGGGCCTGCCTTCACCTTCTCCCATTTCC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCTGTGTCTGGCGGATTaGGCGTCGCCTCGTCACGTT +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWLCLAD*ASPRHV
Trigger: AACGTGACGAGGCGACGCTCAATCCGCCAGACACAG...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGATAGGCAGCCAGGACTaGGCCATCGAACATGTTTCC +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRIGSQD*AIEHVS
Trigger: GGAAACATGTTCGATGGCTCAGTCCTGGCTGCCTAT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCATAGGCAGCCAGGACTaGGCCATCGAACATGTTTCC +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGIGSQD*AIEHVS
Trigger: GGAAACATGTTCGATGGCTCAGTCCTGGCTGCCTAT...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAATAGGCAGCCAGGACTaGGCCATCGAACATGTTTCC +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQIGSQD*AIEHVS
Trigger: GGAAACATGTTCGATGGCTCAGTCCTGGCTGCCTAT...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGGCGATGTTTTCACTaGGCCAGCGCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTGRCFH*ASAGPG
Trigger: TCCAGGCCCTGCGCTGGCTCAGTGAAAACATCGCCC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACTGGAACAGCCCTTCTaGATGGTGGGAGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQELEQPF*MVGEDQ
Trigger: CTGATCCTCTCCCACCATTCAGAAGGGCTGTTCCAG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGCTGGAACAGCCCTTCTaGATGGTGGGAGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGLEQPF*MVGEDQ
Trigger: CTGATCCTCTCCCACCATTCAGAAGGGCTGTTCCAG...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGCAAAGTTGGAGACAGTaGAGTCAAAGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRQSWRQ*SQRRWQ
Trigger: CTGCCAGCGCCTTTGACTTCACTGTCTCCAACTTTG...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGGCTTCTCCTTGCTGTTaGATTTGCTCCACACCACCT +
Preference number: 4 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVASPCC*ICSTPP
Trigger: AGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGC...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAACTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLELLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGAAACACACCCCGTTGTaGGAAAGCACACCTCCACGC +
Preference number: 4 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEKHTPL*ESTPPR
Trigger: GCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTT...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATAAACACACCCCGTTGTaGGAAAGCACACCTCCACGC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHKHTPL*ESTPPR
Trigger: GCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTT...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAAGGAGGGTGGTCAGCTaGGGAGAAGGCTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASRRVVS*GEGWSD
Trigger: GTCAGACCAGCCTTCTCCTCAGCTGACCACCCTCCT...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCATCCCAACCTGTCCGGTaGGACCTTTCTCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASSQPVR*DLSPHC
Trigger: GCAGTGGGGAGAAAGGTCTCACCGGACAGGTTGGGA...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATCCCAACCTGTCCGGTaGGACCTTTCTCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGSQPVR*DLSPHC
Trigger: GCAGTGGGGAGAAAGGTCTCACCGGACAGGTTGGGA...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGGTTCCCCAGCACCGCTaGCCTCATTCTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWVPQHR*PHSPNL
Trigger: CAGGTTGGGAGAATGAGGTCAGCGGTGCTGGGGAAC...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAATTGGAGTCCGTGGCTaGATCATGGGGTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGIGVRG*IMGSPS
Trigger: GCTGGGGGACCCCATGATTCAGCCACGGACTCCAAT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAACAGCCCACCTTGGCTaGCAGCAGCCGCGTGTACTT +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGTAHLG*QQPRVL
Trigger: AAGTACACGCGGCTGCTGGCAGCCAAGGTGGGCTGT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGACCGTCCTCGCTCTCTaGAGAGTCCTCCACGAACTT +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGTVLAL*RVLHEL
Trigger: AAGTTCGTGGAGGACTCTGCAGAGAGCGAGGACGGT...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGCCCGAAGCACATCCTTaGCTTCCGGGTAGCCATACA +
Preference number: 4 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLPEAHP*LPGSHT
Trigger: TGTATGGCTACCCGGAAGGCAAGGATGTGCTTCGGG...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCCGAAGCACATCCTTaGCTTCCGGGTAGCCATACA +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPPEAHP*LPGSHT
Trigger: TGTATGGCTACCCGGAAGGCAAGGATGTGCTTCGGG...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTGCGCCAGCAGGGTTTTaGGGCGCATTTCGCCATTGT +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTAPAGF*GAFRHC
Trigger: ACAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGC...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAGTGAAGAGCTCCGTGTaGAGGTTGTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTVKSSV*RLCRWG
Trigger: GCCCCACCTGCACAACCTGCACACGGAGCTCTTCAC...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGAGGAGAAAAGCCAGTTaGCAAGTCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWRRKAS*QVLLPA
Trigger: GGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCT...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTAGGAGAAAAGCCAGTTaGCAAGTCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPRRKAS*QVLLPA
Trigger: GGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCT...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATAGGAGAAAAGCCAGTTaGCAAGTCCTCCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHRRKAS*QVLLPA
Trigger: GGCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCT...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAAAGTCTGTGCTCACCTaGCATGTGAGGAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQKSVLT*HVRRNW
Trigger: CCAGTTCCTCCTCACATGGCAGGTGAGCACAGACTT...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAGCCCTTAGTTTCCCCTaGCCTGCCTGGGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTALSFP*PAWDWE
Trigger: TTCCCAGTCCCAGGCAGGGCAGGGGAAACTAAGGGC...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTCCTCGCCCTGTATCCTaGTTGCCCTTAGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLPRPVS*LPLVSP
Trigger: AGGGGAAACTAAGGGCAAGCAGGATACAGGGCGAGG...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGATCCTAAGGATCGGGTaGTGGAGGAGGAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGILRIG*WRRSPR
Trigger: ACGTGGACTCCTCCTCCAGCACCCGATCCTTAGGAT...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR GCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAATCCTAAGGATCGGGTaGTGGAGGAGGAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEILRIG*WRRSPR
Trigger: ACGTGGACTCCTCCTCCAGCACCCGATCCTTAGGAT...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAGGACCTGGGTTAGACTaGACAGAGAAGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQGPGLD*TEKGSV
Trigger: AACAGACCCCTTCTCTGTCCAGTCTAACCCAGGTCC...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGGGTTGGGGAGGGACCTaGGTTAGACTGGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWGWGGT*VRLDRE
Trigger: TTCTCTGTCCAGTCTAACCCAGGTCCCTCCCCAACC...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGGTTGGGGAGGGACCTaGGTTAGACTGGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHGWGGT*VRLDRE
Trigger: TTCTCTGTCCAGTCTAACCCAGGTCCCTCCCCAACC...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAGGTTGGGGAGGGACCTaGGTTAGACTGGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: PAHGKTHPVVRKHTSTREGWGGT*VRLDRE
Trigger: TTCTCTGTCCAGTCTAACCCAGGTCCCTCCCCAACC...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAAACAGCCCTTCTGAATaGTGGGAGAGGATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTNSPSE*WERIRR
Trigger: CCTTCTGATCCTCTCCCACCATTCAGAAGGGCTGTT...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTTGGGCGATGGCCTTCTaGAACAGCCCTTCTGAATGG +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLWAMAF*NSPSEW
Trigger: CCATTCAGAAGGGCTGTTCCAGAAGGCCATCGCCCA...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATTGGGCGATGGCCTTCTaGAACAGCCCTTCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHWAMAF*NSPSEW
Trigger: CCATTCAGAAGGGCTGTTCCAGAAGGCCATCGCCCA...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCAGACCAGCTGGAAATaGCGGTGCCACTCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWQTSWK*RCHSGR
Trigger: TCGCCCAGAGTGGCACCGCCATTTCCAGCTGGTCTG...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCACAGACCAGCTGGAAATaGCGGTGCCACTCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASQTSWK*RCHSGR
Trigger: TCGCCCAGAGTGGCACCGCCATTTCCAGCTGGTCTG...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATGGCAGTGGCCACAGCTaGTGCCACCCATTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QMPKPKALRGVTSHISNYGSGHS*CHPLVV
Trigger: GACCACCAATGGGTGGCACCAGCTGTGGCCACTGCC...ATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCACGGTGGCACCCACCATaGGCACGCCAAAGACATAGG +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASRWHPP*ARQRHR
Trigger: CCTATGTCTTTGGCGTGCCCATGGTGGGTGCCACCG...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAAGAAGGCCACCTTGTTaGCGCGGTAGTTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLERRPPC*RGSCHA
Trigger: TGCGTGACAACTACCGCGCCAACAAGGTGGCCTTCT...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTCCTATACCCGAGTGGTaGAGTGGGGGTGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTPIPEW*SGGGVA
Trigger: CGCTACCCCACCCCCACTCCACCACTCGGGTATAGG...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAATGAGGGCTTTGGTCAAACATCTTAGCGCTGCTGGATaGCGTGTGACGACTCCACAG +
Preference number: 4 (lower is better)
Translates to: EAWGKGCPRTTMRALVKHLSAAG*RVTTPQ
Trigger: CTGTGGAGTCGTCACACGCCATCCAGCAGCGCTAAG...ATGTTTGACCAAAGCCCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGGGGGAACAGGATTCTaGGGTACAAATCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGGGTGF*GTNPHR
Trigger: TCTGTGGGGATTTGTACCCCAGAATCCTGTTCCCCC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTAGGTGGGAGAAGGGATaGGGGAACAGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTRWEKG*GNRILG
Trigger: CCCCAGAATCCTGTTCCCCCATCCCTTCTCCCACCT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCTCCTCTGTGGTCTGGTaGCCAAGGGTCACTGTATGT +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLSSVVW*PRVTVC
Trigger: ACATACAGTGACCCTTGGCCACCAGACCACAGAGGA...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAATCCTCTGTGGTCTGGTaGCCAAGGGTCACTGTATGT +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQSSVVW*PRVTVC
Trigger: ACATACAGTGACCCTTGGCCACCAGACCACAGAGGA...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACATGTGTCTGTCCTCTCTaGAAGGTGAGGGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTCVCPL*KVRASP
Trigger: CGGGGAGGCCCTCACCTTCCAGAGAGGACAGACACA...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGGAGGGGCCGTCTGCCTaGGGAAACACACATCCACAT +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLEGPSA*GNTHPH
Trigger: ATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTC...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGGGGCATTGGAGTCCGTaGCTGAATCATGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRGHWSP*LNHGVP
Trigger: GGGGACCCCATGATTCAGCCACGGACTCCAATGCCC...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGAGGAGCTGGGCATTaGAGTCCGTGGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRERGAGH*SPWLNH
Trigger: ATGATTCAGCCACGGACTCCAATGCCCAGCTCCTCT...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGAGATTGAGGATCCGCTaGTTCCGTGGGCCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWRLRIR*FRGPAS
Trigger: CGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCT...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCAAAGTTGGAGACAGTaGAGTCAAAGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPQSWRQ*SQRRWQ
Trigger: CTGCCAGCGCCTTTGACTTCACTGTCTCCAACTTTG...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGCAAAGTTGGAGACAGTaGAGTCAAAGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWQSWRQ*SQRRWQ
Trigger: CTGCCAGCGCCTTTGACTTCACTGTCTCCAACTTTG...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGCTTCTCCTTGCTGTTaGATTTGCTCCACACCACCT +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGASPCC*ICSTPP
Trigger: AGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGAAGGGTCACTGTATGTaGACACACCACTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRKGHCM*THHFQG
Trigger: ACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCAAGGGTCACTGTATGTaGACACACCACTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGKGHCM*THHFQG
Trigger: ACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTT...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAAGTCCTCGGACCACAATaGGGGCTTTGGTCAAACATG +
Preference number: 4 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLEVLGPQ*GLWSNM
Trigger: CATGTTTGACCAAAGCCCTCATTGTGGTCCGAGGAC...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAGGGACAGGACTAGATTaGGGATCCGCTGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGGTGLD*GSAGSV
Trigger: CACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCC...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR TCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAGGGACAGGACTAGATTaGGGATCCGCTGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTGTGLD*GSAGSV
Trigger: CACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCC...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR GCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGTGAAGAGCTCCGTGTaGAGGTTGTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTVKSSV*RLCRWG
Trigger: GCCCCACCTGCACAACCTGCACACGGAGCTCTTCAC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCTTCCACTCAGAGAAATaGGTCCTGGCCACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPFHSEK*VLATGK
Trigger: TTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGGAA...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAAAGAGAGGGGCCGTCTaGCTGGGGAAACACACATCC +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRKRGAV*LGKHTS
Trigger: GGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTT...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATTCCTGCTGGTGTCTaGCCAAGCCCTGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRIPAGV*PSPVPT
Trigger: AGTGGGGACAGGGCTTGGGCAGACACCAGCAGGAAT...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTACGGATATCTGTGTCTaGCGGATTGAGCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTTDICV*RIERRL
Trigger: GAGGCGACGCTCAATCCGCCAGACACAGATATCCGT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAGGGTCGCCCCCAAAGTaGGCGATGTTTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRGSPPK*AMFSLS
Trigger: GCTCAGTGAAAACATCGCCCACTTTGGGGGCGACCC...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAAGCCCTTCTGAATGGTaGGAGAGGATCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPSPSEW*ERIRRL
Trigger: CAACCTTCTGATCCTCTCCCACCATTCAGAAGGGCT...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAAGCCCTTCTGAATGGTaGGAGAGGATCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LWKVRASPAERASSDLCQSPSEW*ERIRRL
Trigger: CAACCTTCTGATCCTCTCCCACCATTCAGAAGGGCT...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCAACAGCCCTTCTGAATaGTGGGAGAGGATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPNSPSE*WERIRR
Trigger: CCTTCTGATCCTCTCCCACCATTCAGAAGGGCTGTT...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGAACAGCCCTTCTGAATaGTGGGAGAGGATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRNSPSE*WERIRR
Trigger: CCTTCTGATCCTCTCCCACCATTCAGAAGGGCTGTT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCATGCCACTCTGGGCGATaGCCTTCTGGAACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLREMRPGHGKISFQAASCHSGR*PSGTAL
Trigger: AAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCA...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGATGCCACTCTGGGCGATaGCCTTCTGGAACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRCHSGR*PSGTAL
Trigger: AAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCA...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTTTGAGGCCCTCTCCCTaGTTGACGCCGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLLRPSP*LTPMSM
Trigger: CATGCTCATCGGCGTCAACCAGGGAGAGGGCCTCAA...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGGTTGTCACGCACGCGTaGCTTCAGGCCTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWVVTHA*LQAYVQ
Trigger: CTGCACATAGGCCTGAAGCCACGCGTGCGTGACAAC...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGGGGGAACAGGATTCTaGGGTACAAATCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWGGTGF*GTNPHR
Trigger: TCTGTGGGGATTTGTACCCCAGAATCCTGTTCCCCC...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGTCCTCTGTGGTCTGGTaGCCAAGGGTCACTGTATGT +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGSSVVW*PRVTVC
Trigger: ACATACAGTGACCCTTGGCCACCAGACCACAGAGGA...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAAGGCTCCATCCTCTGTaGTCTGGTGGCCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTRLHPL*SGGQGS
Trigger: TGACCCTTGGCCACCAGACCACAGAGGATGGAGCCT...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCCAGGGATTCTGGATTTaGGTGTCAGTGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPQGFWI*VSVEDS
Trigger: GCTGTCTTCCACTGACACCCAAATCCAGAATCCCTG...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGCATTTGGAGGGCATaGCTGTTTGGAGAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRESIWRA*LFGEEL
Trigger: TAGCTCCTCTCCAAACAGCCATGCCCTCCAAATGCT...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGAGAGCCGCAAAGGGTTaGGGTAGGGATAAGGGATTG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGRAAKG*GRDKGL
Trigger: CAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCT...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGAGAGCCGCAAAGGGTTaGGGTAGGGATAAGGGATTG +
Preference number: 4 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLRAAKG*GRDKGL
Trigger: CAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCT...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGACTGGAACAGCCCTTCTaGATGGTGGGAGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGLEQPF*MVGEDQ
Trigger: CTGATCCTCTCCCACCATTCAGAAGGGCTGTTCCAG...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTCAAAGTTGGAGACAGTaGAGTCAAAGGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTQSWRQ*SQRRWQ
Trigger: CTGCCAGCGCCTTTGACTTCACTGTCTCCAACTTTG...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTGCTTCTCCTTGCTGTTaGATTTGCTCCACACCACCT +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLASPCC*ICSTPP
Trigger: AGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGC...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACCTGCTGGATGGCGTGTaGCGACTCCACAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHLLDGV*RLHRRK
Trigger: TTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAG...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTAAACACACCCCGTTGTaGGAAAGCACACCTCCACGC +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLKHTPL*ESTPPR
Trigger: GCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTT...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGAAGGGTCACTGTATGTaGACACACCACTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWKGHCM*THHFQG
Trigger: ACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTT...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAACCGTCCTCGCTCTCTaGAGAGTCCTCCACGAACTT +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRTVLAL*RVLHEL
Trigger: AAGTTCGTGGAGGACTCTGCAGAGAGCGAGGACGGT...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGACCCGAAGCACATCCTTaGCTTCCGGGTAGCCATACA +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRPEAHP*LPGSHT
Trigger: TGTATGGCTACCCGGAAGGCAAGGATGTGCTTCGGG...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGTTCCACTCAGAGAAATaGGTCCTGGCCACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWFHSEK*VLATGK
Trigger: TTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGGAA...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTTTCCACTCAGAGAAATaGGTCCTGGCCACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLFHSEK*VLATGK
Trigger: TTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGGAA...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGAAGTCTGTGCTCACCTaGCATGTGAGGAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLKSVLT*HVRRNW
Trigger: CCAGTTCCTCCTCACATGGCAGGTGAGCACAGACTT...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACGGCACGGATGAGCAATaGTCTGAGGCCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHGTDEQ*SEAWGK
Trigger: TTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACCCTCGCCCTGTATCCTaGTTGCCCTTAGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHPRPVS*LPLVSP
Trigger: AGGGGAAACTAAGGGCAAGCAGGATACAGGGCGAGG...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAACGGATATCTGTGTCTaGCGGATTGAGCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTTDICV*RIERRL
Trigger: GAGGCGACGCTCAATCCGCCAGACACAGATATCCGT...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGACGGATATCTGTGTCTaGCGGATTGAGCGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWTDICV*RIERRL
Trigger: GAGGCGACGCTCAATCCGCCAGACACAGATATCCGT...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATAGCCCTTCTGAATGGTaGGAGAGGATCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: RDWASLRGKDTHRREESHSPSEW*ERIRRL
Trigger: CAACCTTCTGATCCTCTCCCACCATTCAGAAGGGCT...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGAGCCCTTCTGAATGGTaGGAGAGGATCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGSPSEW*ERIRRL
Trigger: CAACCTTCTGATCCTCTCCCACCATTCAGAAGGGCT...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAACAGCCCTTCTGAATaGTGGGAGAGGATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASLRGKDTHRREESHVHLNSPSE*WERIRR
Trigger: CCTTCTGATCCTCTCCCACCATTCAGAAGGGCTGTT...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGGGCGATGGCCTTCTaGAACAGCCCTTCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGWAMAF*NSPSEW
Trigger: CCATTCAGAAGGGCTGTTCCAGAAGGCCATCGCCCA...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTAGAAGGCCACCTTGTTaGCGCGGTAGTTGTCACGCA +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLRRPPC*RGSCHA
Trigger: TGCGTGACAACTACCGCGCCAACAAGGTGGCCTTCT...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GACTGGGAAATTCTTGGCACATTTTGGGAGTCTTTCCGCTCAAATCCACCTACCACCCGAGTGGTGGAGTaGGGGTGGGGTAGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: DWEILGTFWESFRSNPPTTRVVE*GWGSVL
Trigger: CAACACGCTACCCCACCCCCACTCCACCACTCGGGT...GGTAGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCACAGAGAAATGCGTCCTaGCCACGGGAAAATAAGCTT +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPQRNAS*PRENKL
Trigger: AAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTG...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGAGGGGCCGTCTGCCTaGGGAAACACACATCCACAT +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTEGPSA*GNTHPH
Trigger: ATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGTCAAATTATTCCTGCTaGTGTCTGCCCAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PRVTVCEHTTSRVSRGRESNYSC*CLPKPC
Trigger: ACAGGGCTTGGGCAGACACCAGCAGGAATAATTTGA...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACAAGAGGCAAAGTTCTaGGGACTCAAGACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SLARMSNALRPGEKAVLGQEAKF*GLKTRD
Trigger: ATCCCTGGTCTTGAGTCCCCAGAACTTTGCCTCTTG...TCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGAGCATTTGGAGGGCATaGCTGTTTGGAGAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: KDTHRREESHVHLSAAGWSIWRA*LFGEEL
Trigger: TAGCTCCTCTCCAAACAGCCATGCCCTCCAAATGCT...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCAGGTCTCTAGCATTTaGAGGGCATGGCTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTQVSSI*RAWLFG
Trigger: TCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
3UTR CAA 72 bp TTTGGGAGTCTTTCCGCTCAAATCCACCTACCCAGTTaGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FGSLSAQIHLPS*ARMSNALRPGE
Trigger: TTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGGTGGATTTGAGCGGAAAGACTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGGTCCTCGGACCACAATaGGGGCTTTGGTCAAACATG +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRVLGPQ*GLWSNM
Trigger: CATGTTTGACCAAAGCCCTCATTGTGGTCCGAGGAC...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTCCCGAAGCACATCCTTaGCTTCCGGGTAGCCATACA +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTPEAHP*LPGSHT
Trigger: TGTATGGCTACCCGGAAGGCAAGGATGTGCTTCGGG...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGACCCTCCTCAGCTCCTaGCAACTAGAAGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWTLLSS*QLEVCA
Trigger: AGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGT...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGGCAAGGGAAATTGGATaGGGCAGACAGAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTAREIG*GRQKGM
Trigger: CATTCCTTTCTGTCTGCCCCATCCAATTTCCCTTGC...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGGGGGGAACAGGATTCTaGGGTACAAATCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWGGTGF*GTNPHR
Trigger: TCTGTGGGGATTTGTACCCCAGAATCCTGTTCCCCC...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAGGGGGAACAGGATTCTaGGGTACAAATCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTGGTGF*GTNPHR
Trigger: TCTGTGGGGATTTGTACCCCAGAATCCTGTTCCCCC...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACATCCTCTGTGGTCTGGTaGCCAAGGGTCACTGTATGT +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTSSVVW*PRVTVC
Trigger: ACATACAGTGACCCTTGGCCACCAGACCACAGAGGA...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATGGATTTGGGTGTCAGTaGAAGACAGCACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDGFGCQ*KTAPQP
Trigger: GGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCC...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACAAGACCAGGGATTCTaGATTTGGGTGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEQDQGF*IWVSVE
Trigger: TTCCACTGACACCCAAATCCAGAATCCCTGGTCTTG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTATAGGCAGCCAGGACTaGGCCATCGAACATGTTTCC +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTIGSQD*AIEHVS
Trigger: GGAAACATGTTCGATGGCTCAGTCCTGGCTGCCTAT...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR TCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAAAGGGTCACTGTATGTaGACACACCACTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTKGHCM*THHFQG
Trigger: ACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTT...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AAAATGTGTACAGAGCCGCAAAGGGTTGGGGTAGGGATAAGGGATTGTCGGGATACCGTCCTCGCTCTCTaGAGAGTCCTCCACGAACTT +
Preference number: 4 (lower is better)
Translates to: KMCTEPQRVGVGIRDCRDTVLAL*RVLHEL
Trigger: AAGTTCGTGGAGGACTCTGCAGAGAGCGAGGACGGT...ATCCCGACAATCCCTTATCCCTACCCCAACCCTTTGCGGCTCTGTACACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGCCTATGTGCAGATACTaGTTCTCCTTGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRPMCRY*FSLLLN
Trigger: ATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGG...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACATTCCACTCAGAGAAATaGGTCCTGGCCACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTFHSEK*VLATGK
Trigger: TTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGGAA...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAAAACACACATCCACATaGAAGAACCTGTTTCCACTC +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPKHTST*KNLFPL
Trigger: GAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTT...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GACTGGGAAATTCTTGGCACATTTTGGGAGTCTTTCCGCTCAAATCCACCTACCGGGTCGCCCCCAAAGTaGGCGATGTTTTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: DWEILGTFWESFRSNPPTGSPPK*AMFSLS
Trigger: GCTCAGTGAAAACATCGCCCACTTTGGGGGCGACCC...GGTAGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACATCCAGAGAAGAGACTaGGCTTCTCTGCGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHIQRRD*ASLRGK
Trigger: TTTCCCACGCAGAGAAGCCCAGTCTCTTCTCTGGAT...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAATGAGGGCTTTGGTCAAACATCAGAGAAATGCGTCCTaGCCACGGGAAAATAAGCTT +
Preference number: 4 (lower is better)
Translates to: EAWGKGCPRTTMRALVKHQRNAS*PRENKL
Trigger: AAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTG...ATGTTTGACCAAAGCCCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAATTCTTGGCACATTTTaGGAGTCTTTCCGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTILGTF*ESFRSN
Trigger: ATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAAT...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCGGACTGGGAAATTCTTaGCACATTTTGGGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: GHGKISFQAASGCVDSSLGLGNS*HILGVF
Trigger: AAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCC...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGACAAGAGGCAAAGTTCTaGGGACTCAAGACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGQEAKF*GLKTRD
Trigger: ATCCCTGGTCTTGAGTCCCCAGAACTTTGCCTCTTG...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGACAGGTCTCTAGCATTTaGAGGGCATGGCTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LREMRPGHGKISFQAASGQVSSI*RAWLFG
Trigger: TCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTG...TCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGTTGTCGGGATTGTTTTaGGGAGAGGAGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWLSGLF*GEELGI
Trigger: AATGCCCAGCTCCTCTCCCCAAAACAATCCCGACAA...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGTTGTCGGGATTGTTTTaGGGAGAGGAGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRLSGLF*GEELGI
Trigger: AATGCCCAGCTCCTCTCCCCAAAACAATCCCGACAA...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR TCA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGCTTCTCCTTGCTGTTaGATTTGCTCCACACCACCT +
Preference number: 4 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTASPCC*ICSTPP
Trigger: AGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGCCTATGTGCAGATACTaGTTCTCCTTGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGPMCRY*FSLLLN
Trigger: ATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGG...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTATGTGCAGATACTaGTTCTCCTTGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CWEERGRLPGETHIHMQEPMCRY*FSLLLN
Trigger: ATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGCAGAGAAATGCGTCCTaGCCACGGGAAAATAAGCTT +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRQRNAS*PRENKL
Trigger: AAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTG...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACTCAAATTATTCCTGCTaGTGTCTGCCCAAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHSNYSC*CLPKPC
Trigger: ACAGGGCTTGGGCAGACACCAGCAGGAATAATTTGA...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACAAGACCAGGGATTCTaGATTTGGGTGTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTQDQGF*IWVSVE
Trigger: TTCCACTGACACCCAAATCCAGAATCCCTGGTCTTG...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp CTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTATTTCAAATTATTCCTaGTGGTGTCTGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LHPLWSGGQGSLYVNTPLISNYS*WCLPKP
Trigger: GGGCTTGGGCAGACACCAGCAGGAATAATTTGAAAT...AAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTAACAGAAGAGACAAGTaGTTAGTGACCTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPNRRDK*LVTWNS
Trigger: TGAATTCCAGGTCACTAACCACTTGTCTCTTCTGTT...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTGGACTGGGAAATTCTTaGCACATTTTGGGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTGLGNS*HILGVF
Trigger: AAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCC...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR GCA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAAAACACACATCCACATaGAAGAACCTGTTTCCACTC +
Preference number: 4 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRKHTST*KNLFPL
Trigger: GAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTT...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAAACACACATCCACATaGAAGAACCTGTTTCCACTC +
Preference number: 4 (lower is better)
Translates to: TQRNASWPRENKLPGSIRKHTST*KNLFPL
Trigger: GAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTT...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR GCA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAAAACACACATCCACATaGAAGAACCTGTTTCCACTC +
Preference number: 4 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTKHTST*KNLFPL
Trigger: GAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTT...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CCA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTATTCTTGGCACATTTTaGGAGTCTTTCCGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTILGTF*ESFRSN
Trigger: ATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAAT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp AGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGTGACGACTCCAATAACTAATTTTCCATaGATGGAGGTAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: REESHVHLSAAGWRVTTPITNFP*MEVGRE
Trigger: TTCTCTTCCTACCTCCATCCATGGAAAATTAGTTAT...TGGAGTCGTCACACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACAACAGAAGAGACAAGTaGTTAGTGACCTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHNRRDK*LVTWNS
Trigger: TGAATTCCAGGTCACTAACCACTTGTCTCTTCTGTT...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CCA 90 bp CGGGGTTTGTTCACCCTCCTCAGCTCCTGCCAACTAGAAGTCTGTGCTCACCTGATAACTAATTTTCCATaGATGGAGGTAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RGLFTLLSSCQLEVCAHLITNFP*MEVGRE
Trigger: TTCTCTTCCTACCTCCATCCATGGAAAATTAGTTAT...CAGGTGAGCACAGACTTCTAGTTGGCAGGAGCTGAGGAGGGTGAACAAACCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS CCA 90 bp GCAGCGCCCCGTGCAGGTTCTGCGGGCAGGCGGGCGGCAGGGTGGTaGCGTTGCGCACGCCGGGCCACGAGGCGGGCGCCTCAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: AAPRAGSAGRRAAGW*RCARRATRRAPQAA
Trigger: AGCCGCCTGAGGCGCCCGCCTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCGCTGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS GCA 90 bp AGAGCCTCGGCAGGGTCCGCCCCGACGCCACCACCCCGCTTCAGCTaGAGTGACACCAGCTCCTCCTCTGGTGGCAGCTCACGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: RASAGSAPTPPPRFS*SDTSSSSGGSSRPA
Trigger: CGCGGGCCGTGAGCTGCCACCAGAGGAGGAGCTGGTGTCACTGCAGCTGAAGCGGGGTGGTGGCGTCGGGGCGGACCCTGCCGAGGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS GCA 90 bp TTGTCGGTGAACCACACAGGCAGCATGATGGCGGGCAGCGCCCCGTaGAGGTTCTGCGGGCAGGCGGGCGGCAGGGTGGTGGCGTTGCGC +
Preference number: 5 (lower is better)
Translates to: LSVNHTGSMMAGSAP*RFCGQAGGRVVALR
Trigger: GCGCAACGCCACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTGGTTCACCGACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS TCA 90 bp AGGGCACGCCCAAGAACTGCACGACGGGGCCCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGCGCACTCGCCCGTAGGCCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: RARPRTARRGPGSRC*ARAAHRALARRPCS
Trigger: TGAACACGGCCTACGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGGGCAGGGTGGTGGCGTaGCGCACGCCGGGCCACGAG +
Preference number: 5 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVGRVVA*RTPGHE
Trigger: CTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCC...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGGGCCCAGGATCTCGTaGTTGAGCTCGCGCCGCACA +
Preference number: 5 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGGPRIS*LSSRRT
Trigger: TGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGCGGCCGCCTCCAAGTaGTCGGTGAACCACACAGGC +
Preference number: 5 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGAAASK*SVNHTG
Trigger: GCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTGGCAGGGTGGTGGCGTaGCGCACGCCGGGCCACGAG +
Preference number: 5 (lower is better)
Translates to: ASLRGKDTHRREESHVHLGRVVA*RTPGHE
Trigger: CTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCC...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGGCCCTCTCCCTGGTaGACGCCGATGAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGRPSPW*TPMSMS
Trigger: CGACATGCTCATCGGCGTCAACCAGGGAGAGGGCCT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCAGCGGTCATAGGCCCTaGGGCCGGGCTCGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPSGHRP*GRARAR
Trigger: CCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGCT...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CCA 90 bp AGAGAAAGGAGGGGGCAACGGGACAGGACTAGATTGAGGATCCGCTaGTTCCGTGGGCCGGCTTCGAGGGACCAGAAGGCGGTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RERRGQRDRTRLRIR*FRGPASRDQKAVQA
Trigger: CGCCTGGACCGCCTTCTGGTCCCTCGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCCGTTGCCCCCTCCTTTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CAA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGAGCGCCAGCAGGGTTTaGCGGCGCATTTCGCCATTG +
Preference number: 5 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGSASRV*RRISPL
Trigger: CAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGCT...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAAAGCGGTCATAGGCCCTaGGGCCGGGCTCGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: CWEERGRLPGETHIHMQESGHRP*GRARAR
Trigger: CCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGCT...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGGCAGGGTGGTGGCGTaGCGCACGCCGGGCCACGAG +
Preference number: 5 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPGRVVA*RTPGHE
Trigger: CTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATCGGTCACAGCCCACCTaGGCTGCCAGCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: RDWASLRGKDTHRREESHRSQPT*AASSRV
Trigger: CACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCG...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCGGTCACAGCCCACCTaGGCTGCCAGCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPRSQPT*AASSRV
Trigger: CACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCG...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGTCACAGCCCACCTaGGCTGCCAGCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTRSQPT*AASSRV
Trigger: CACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGCGGCGCATTTCGCCATaGTCCCGGTCGGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVRRISP*SRSAQS
Trigger: AGACTGGGCCGACCGGGACAATGGCGAAATGCGCCG...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGTGCGGCACCGGCTGGTaGGGGTCCCCAGTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: KDTHRREESHVHLSAAGWCGTGW*GSPVLA
Trigger: CGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGCA...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTTGCGGCACCGGCTGGTaGGGGTCCCCAGTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: ASLRGKDTHRREESHVHLCGTGW*GSPVLA
Trigger: CGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGCA...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGTGCGGCACCGGCTGGTaGGGGTCCCCAGTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWCGTGW*GSPVLA
Trigger: CGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGCA...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCCCCAGGATCTCGTTGTaGAGCTCGCGCCGCACACCG +
Preference number: 5 (lower is better)
Translates to: GHGKISFQAASGCVDSSLPRISL*SSRRTP
Trigger: CGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGG...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAACCCAGGATCTCGTTGTaGAGCTCGCGCCGCACACCG +
Preference number: 5 (lower is better)
Translates to: LWKVRASPAERASSDLCQPRISL*SSRRTP
Trigger: CGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGG...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCAGGGTGGTGGCGTaGCGCACGCCGGGCCACGAG +
Preference number: 5 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTGRVVA*RTPGHE
Trigger: CTCGTGGCCCGGCGTGCGCAACGCCACCACCCTGCC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGCGGCCGCCTCCAAGTaGTCGGTGAACCACACAGGC +
Preference number: 5 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGAAASK*SVNHTG
Trigger: GCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGC...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCCGGCGCATTTCGCCATaGTCCCGGTCGGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGRRISP*SRSAQS
Trigger: AGACTGGGCCGACCGGGACAATGGCGAAATGCGCCG...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCATGCGGCACCGGCTGGTaGGGGTCCCCAGTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSCGTGW*GSPVLA
Trigger: CGCCAAGACTGGGGACCCCAACCAGCCGGTGCCGCA...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACAAGCGGTCATAGGCCCTaGGGCCGGGCTCGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTSGHRP*GRARAR
Trigger: CCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGCT...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACAGCGGTCATAGGCCCTaGGGCCGGGCTCGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHSGHRP*GRARAR
Trigger: CCGAGCCCGAGCCCGGCCCAAGGGCCTATGACCGCT...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS TCA 90 bp GTAGGGACGATAGAGAAAGGAGGGGGCAACGGGACAGGACTAGATTaGGGATCCGCTGGTTCCGTGGGCCGGCTTCGAGGGACCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VGTIEKGGGNGTGLD*GSAGSVGRLRGTRR
Trigger: CCTTCTGGTCCCTCGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCCGTTGCCCCCTCCTTTCTCTATCGTCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS-3UTR CAA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAACCCAGGATCTCGTTGTaGAGCTCGCGCCGCACACCG +
Preference number: 5 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLEPRISL*SSRRTP
Trigger: CGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGG...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTGCGGCCGCCTCCAAGTaGTCGGTGAACCACACAGGC +
Preference number: 5 (lower is better)
Translates to: ASLRGKDTHRREESHVHLAAASK*SVNHTG
Trigger: GCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGC...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTGCGGCCGCCTCCAAGTaGTCGGTGAACCACACAGGC +
Preference number: 5 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPAAASK*SVNHTG
Trigger: GCCTGTGTGGTTCACCGACAACTTGGAGGCGGCCGC...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGCGGTCACAGCCCACCTaGGCTGCCAGCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: TQRNASWPRENKLPGSIRRSQPT*AASSRV
Trigger: CACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCG...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAACGGCGCATTTCGCCATaGTCCCGGTCGGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLERRISP*SRSAQS
Trigger: AGACTGGGCCGACCGGGACAATGGCGAAATGCGCCG...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AGAGACTGGGCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATCGGCGCATTTCGCCATaGTCCCGGTCGGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RDWASLRGKDTHRREESHRRISP*SRSAQS
Trigger: AGACTGGGCCGACCGGGACAATGGCGAAATGCGCCG...ATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGCCCAGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCTCCGTGTGCAGGTaGTGCAGGTGGGGCACGAGC +
Preference number: 5 (lower is better)
Translates to: ASLRGKDTHRREESHVHLSSVCR*CRWGTS
Trigger: GCTCGTGCCCCACCTGCACAACCTGCACACGGAGCT...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAGCTCCGTGTGCAGGTaGTGCAGGTGGGGCACGAGC +
Preference number: 5 (lower is better)
Translates to: PAHGKTHPVVRKHTSTRESSVCR*CRWGTS
Trigger: GCTCGTGCCCCACCTGCACAACCTGCACACGGAGCT...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCTCTGTGTCTGGCGGATaGAGCGTCGCCTCGTCACGT +
Preference number: 5 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPSVSGG*SVASSR
Trigger: ACGTGACGAGGCGACGCTCAATCCGCCAGACACAGA...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCTCTGTGTCTGGCGGATaGAGCGTCGCCTCGTCACGT +
Preference number: 5 (lower is better)
Translates to: GHGKISFQAASGCVDSSLSVSGG*SVASSR
Trigger: ACGTGACGAGGCGACGCTCAATCCGCCAGACACAGA...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAGAGAGGATCAGAAGGTaGACGCAGGAGGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PAHGKTHPVVRKHTSTREERIRR*TQEAPA
Trigger: GGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCTC...TTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGGAGAGGATCAGAAGGTaGACGCAGGAGGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTERIRR*TQEAPA
Trigger: GGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCTC...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCAAGGGTCACTGTATGTGAACACACCACTTCCAGGGTCTCCAGGGGGAGGGAGGAGTCCTCCACGAACTaGAGGCCCTCTCCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PRVTVCEHTTSRVSRGREESSTN*RPSPWL
Trigger: CAACCAGGGAGAGGGCCTCAAGTTCGTGGAGGACTC...CTCCCTCCCCCTGGAGACCCTGGAAGTGGTGTGTTCACATACAGTGACCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCACACATTTCAAATTATTCCTGAGCTCCGTGTGCAGGTaGTGCAGGTGGGGCACGAGC +
Preference number: 5 (lower is better)
Translates to: AQAQGPPGSHLTHFKLFLSSVCR*CRWGTS
Trigger: GCTCGTGCCCCACCTGCACAACCTGCACACGGAGCT...CAGGAATAATTTGAAATGTGTGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAGAGAGGAGCTGGGCATaGGAGTCCGTGGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: GTDEQCSEAWGKGCPRTTERSWA*ESVAES
Trigger: TGATTCAGCCACGGACTCCAATGCCCAGCTCCTCTC...TGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACCACTTCCAGGGTCTCCAGGGGGAGGGAGAGGGGAGGAGGTGGGAGAAGGGGGTAGGGATAAGGGATaGTCGGGATTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: TPLPGSPGGGRGEEVGEGGRDKG*SGLFWG
Trigger: TCCCCAAAACAATCCCGACAATCCCTTATCCCTACC...CCCTTCTCCCACCTCCTCCCCTCTCCCTCCCCCTGGAGACCCTGGAAGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCACCCAGGATCTCGTTGTaGAGCTCGCGCCGCACACCG +
Preference number: 5 (lower is better)
Translates to: PLREMRPGHGKISFQAASPRISL*SSRRTP
Trigger: CGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGG...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ATGCGTGGACTCCTCCCTCCCCCAGCAGGAAATCTGTGTCTGTCCTCTCTGGAATCTGTGTCTGGCGGATaGAGCGTCGCCTCGTCACGT +
Preference number: 5 (lower is better)
Translates to: MRGLLPPPAGNLCLSSLESVSGG*SVASSR
Trigger: ACGTGACGAGGCGACGCTCAATCCGCCAGACACAGA...TTCCAGAGAGGACAGACACAGATTTCCTGCTGGGGGAGGGAGGAGTCCACGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGTCTGTGTCTGGCGGATaGAGCGTCGCCTCGTCACGT +
Preference number: 5 (lower is better)
Translates to: PQLFKGPDPEKRLGFSAWSVSGG*SVASSR
Trigger: ACGTGACGAGGCGACGCTCAATCCGCCAGACACAGA...CCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGGAGTCCTCCACGAACTaGAGGCCCTCTCCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGESSTN*RPSPWL
Trigger: CAACCAGGGAGAGGGCCTCAAGTTCGTGGAGGACTC...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGAGCGCCAGCAGGGTTTaGCGGCGCATTTCGCCATTG +
Preference number: 5 (lower is better)
Translates to: KDTHRREESHVHLSAAGWSASRV*RRISPL
Trigger: CAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGCT...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAAGCTCCGTGTGCAGGTaGTGCAGGTGGGGCACGAGC +
Preference number: 5 (lower is better)
Translates to: PLREMRPGHGKISFQAASSSVCR*CRWGTS
Trigger: GCTCGTGCCCCACCTGCACAACCTGCACACGGAGCT...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp AAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCCAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: KTRIAGRNPMSTLALLDGQEKSQ*PSPPPC
Trigger: GCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTG...GCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGAGAGGATCAGAAGGTaGACGCAGGAGGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPERIRR*TQEAPA
Trigger: GGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCTC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGGAGAGGATCAGAAGGTaGACGCAGGAGGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: TQRNASWPRENKLPGSIRERIRR*TQEAPA
Trigger: GGCAGGGGCCTCCTGCGTCAACCTTCTGATCCTCTC...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACAGGCCCTCTCCCTGGTaGACGCCGATGAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHRPSPW*TPMSMS
Trigger: CGACATGCTCATCGGCGTCAACCAGGGAGAGGGCCT...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAGGCCCTCTCCCTGGTaGACGCCGATGAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: TQRNASWPRENKLPGSIRRPSPW*TPMSMS
Trigger: CGACATGCTCATCGGCGTCAACCAGGGAGAGGGCCT...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACCTGTTTCCACTCAGAAGGCCCTCTCCCTGGTaGACGCCGATGAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: AVCLGKHTSTCKNLFPLRRPSPW*TPMSMS
Trigger: CGACATGCTCATCGGCGTCAACCAGGGAGAGGGCCT...TCTGAGTGGAAACAGGTTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACATCATTCTTTTCCCAAATGCCCAAGCCCAAGGCCCTCCGGGGAGTCACCTCAGAGTCCTCCACGAACTaGAGGCCCTCTCCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TSFFSQMPKPKALRGVTSESSTN*RPSPWL
Trigger: CAACCAGGGAGAGGGCCTCAAGTTCGTGGAGGACTC...TGAGGTGACTCCCCGGAGGGCCTTGGGCTTGGGCATTTGGGAAAAGAATGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTAGCGCCAGCAGGGTTTaGCGGCGCATTTCGCCATTG +
Preference number: 5 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTSASRV*RRISPL
Trigger: CAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGCT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGTTGGTGTGGATGAACTaGGTATCCTGCGGCACCGGC +
Preference number: 5 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGLVWMN*VSCGTG
Trigger: GCCGGTGCCGCAGGATACCAAGTTCATCCACACCAA...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTGCTGGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTTTGGTGTGGATGAACTaGGTATCCTGCGGCACCGGC +
Preference number: 5 (lower is better)
Translates to: AAGWRVTTPQEKSQLPSPLVWMN*VSCGTG
Trigger: GCCGGTGCCGCAGGATACCAAGTTCATCCACACCAA...AGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGATGCGTGGACTCCTCCCTCACCTCCTCGAAGCGATaGGGCTTGGTGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: GHGKISFQAASGCVDSSLTSSKR*GLVWMN
Trigger: GTTCATCCACACCAAGCCCAATCGCTTCGAGGAGGT...GAGGGAGGAGTCCACGCATCCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp TGCTGGGAAGAGAGGGGCCGTCTGCCTGGGGAAACACACATCCACATGCAAGAACAGGAGAAAAGCCAGTaGCCAAGTCCTCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: CWEERGRLPGETHIHMQEQEKSQ*PSPPPC
Trigger: GCAGGGAGGAGGACTTGGCAACTGGCTTTTCTCCTG...TTCTTGCATGTGGATGTGTGTTTCCCCAGGCAGACGGCCCCTCTCTTCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAAGCGCCAGCAGGGTTTaGCGGCGCATTTCGCCATTG +
Preference number: 5 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPSASRV*RRISPL
Trigger: CAATGGCGAAATGCGCCGCAAAACCCTGCTGGCGCT...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTACCTCCTCGAAGCGATaGGGCTTGGTGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: ASLRGKDTHRREESHVHLTSSKR*GLVWMN
Trigger: GTTCATCCACACCAAGCCCAATCGCTTCGAGGAGGT...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCGGACCACAATGAGGGCTTaGGTCAAACATGCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: HPAHGKTHPVVRKHTSTRTTMRA*VKHAWP
Trigger: AGGCCACGCATGTTTGACCAAAGCCCTCATTGTGGT...CCGCGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGAGTCCTCCACGAACTaGAGGCCCTCTCCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTESSTN*RPSPWL
Trigger: CAACCAGGGAGAGGGCCTCAAGTTCGTGGAGGACTC...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CACCCCGTTGTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACATTGGTGTGGATGAACTaGGTATCCTGCGGCACCGGC +
Preference number: 5 (lower is better)
Translates to: HPVVRKHTSTRENTTFHTLVWMN*VSCGTG
Trigger: GCCGGTGCCGCAGGATACCAAGTTCATCCACACCAA...TGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCACAACGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGCCCCACAGAAATTCTTaGAGGGGGCCAACATGTGTC +
Preference number: 5 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTPHRNS*RGPTCV
Trigger: GACACATGTTGGCCCCCTCAAAGAATTTCTGTGGGG...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGCGTGAGCCCCTATTCAAGTTaGGCACTAACACCCCACAAA +
Preference number: 5 (lower is better)
Translates to: TRIAGRNPMSTLALLDGVSPYSS*ALTPHK
Trigger: TTTGTGGGGTGTTAGTGCCAAACTTGAATAGGGGCT...CACGCCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAGAGAGGAGCTGGGCATaGGAGTCCGTGGCTGAATCA +
Preference number: 5 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPERSWA*ESVAES
Trigger: TGATTCAGCCACGGACTCCAATGCCCAGCTCCTCTC...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp ACAGGGTTCAGGGCCCAGGTCTCTAGCATTTGGAGGGCATGGCTGTTTGGAGAGAAGGGATTGTCGGGATaGTTTTGGGGAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TGFRAQVSSIWRAWLFGEKGLSG*FWGEEL
Trigger: CAGCTCCTCTCCCCAAAACAATCCCGACAATCCCTT...CTCTCCAAACAGCCATGCCCTCCAAATGCTAGAGACCTGGGCCCTGAACCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp AAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGCGCTGCTGGATGGAAGGGATTGTCGGGATaGTTTTGGGGAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KDTHRREESHVHLSAAGWKGLSG*FWGEEL
Trigger: CAGCTCCTCTCCCCAAAACAATCCCGACAATCCCTT...CCATCCAGCAGCGCTAAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGACCTCCTCGAAGCGATaGGGCTTGGTGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: TQRNASWPRENKLPGSIRTSSKR*GLVWMN
Trigger: GTTCATCCACACCAAGCCCAATCGCTTCGAGGAGGT...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGTGCTTCTCCTTGCTGTaGAATTTGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTCFSLL*NLLHTT
Trigger: GGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCA...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTCCATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTACCACAATGAGGGCTTaGGTCAAACATGCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: APSSVVWWPRVTVCEHTTTTMRA*VKHAWP
Trigger: AGGCCACGCATGTTTGACCAAAGCCCTCATTGTGGT...AGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GGATGGCGTGTGACGACTCCACAGGAGAAAAGCCAGTTGCCAAGTCCTCCTCCCGGGACTGGGAAATTCTaGGCACATTTTGGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: GWRVTTPQEKSQLPSPPPGTGKF*AHFGSL
Trigger: AAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCCC...GGGAGGAGGACTTGGCAACTGGCTTTTCTCCTGTGGAGTCGTCACACGCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CCCAGTTGTTCAAAGGCCCAGATCCAGAGAAGAGACTGGGCTTCTCTGCGTGGGGGTAGGGATAAGGGATaGTCGGGATTGTTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: PSCSKAQIQRRDWASLRGGRDKG*SGLFWG
Trigger: TCCCCAAAACAATCCCGACAATCCCTTATCCCTACC...CCCACGCAGAGAAGCCCAGTCTCTTCTCTGGATCTGGGCCTTTGAACAACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTGGCCCCACAGAAATTCTTaGAGGGGGCCAACATGTGTC +
Preference number: 5 (lower is better)
Translates to: EKAHLHAGKYHIPHTEDWPHRNS*RGPTCV
Trigger: GACACATGTTGGCCCCCTCAAAGAATTTCTGTGGGG...CCAGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGCCCCACAGAAATTCTTaGAGGGGGCCAACATGTGTC +
Preference number: 5 (lower is better)
Translates to: TQRNASWPRENKLPGSIRPHRNS*RGPTCV
Trigger: GACACATGTTGGCCCCCTCAAAGAATTTCTGTGGGG...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACATCCACCTACCCAGTTaGGCACGGATGAGCAATGCT +
Preference number: 5 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHIHLPS*ARMSNA
Trigger: AGCATTGCTCATCCGTGCCAAACTGGGTAGGTGGAT...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAATCCACCTACCCAGTTaGGCACGGATGAGCAATGCT +
Preference number: 5 (lower is better)
Translates to: PLREMRPGHGKISFQAASIHLPS*ARMSNA
Trigger: AGCATTGCTCATCCGTGCCAAACTGGGTAGGTGGAT...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTCACCCTGCACATGGGAAAACACACCCCGTTGTGAGAAAGCACACCTCCACGGGGACTGGGAAATTCTaGGCACATTTTGGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: PHPAHGKTHPVVRKHTSTGTGKF*AHFGSL
Trigger: AAGACTCCCAAAATGTGCCAAGAATTTCCCAGTCCC...CGTGGAGGTGTGCTTTCTCACAACGGGGTGTGTTTTCCCATGTGCAGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CCACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCATGCTTCTCCTTGCTGTaGAATTTGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: PLREMRPGHGKISFQAASCFSLL*NLLHTT
Trigger: GGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCA...TGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp TGGATTTGGGTGTCAGTGGAAGACAGCACCCCAGCCCCTATTCAAGTTTGGCACTGCTTCTCCTTGCTGTaGAATTTGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: WIWVSVEDSTPAPIQVWHCFSLL*NLLHTT
Trigger: GGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCA...GTGCCAAACTTGAATAGGGGCTGGGGTGCTGTCTTCCACTGACACCCAAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GCTTCTCTGCGTGGGAAAGACACGCATCGCAGGGAGGAATCCCATGTCCACCTTAGATACTGCTTCTCCTaGCTGTTGAATTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: ASLRGKDTHRREESHVHLRYCFS*LLNLLH
Trigger: GTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCT...AAGGTGGACATGGGATTCCTCCCTGCGATGCGTGTCTTTCCCACGCAGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp CCTACCCAGTTTGGCACGGATGAGCAATGCTCTGAGGCCTGGGGAAAAGGCTGTAGATACTGCTTCTCCTaGCTGTTGAATTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PTQFGTDEQCSEAWGKGCRYCFS*LLNLLH
Trigger: GTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCT...ACAGCCTTTTCCCCAGGCCTCAGAGCATTGCTCATCCGTGCCAAACTGGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CTCTGGAAGGTGAGGGCCTCCCCGGCAGAACGTGCTTCATCTGACTTGTGCCAAAATTCTTGGCACATTTaGGGAGTCTTTCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LWKVRASPAERASSDLCQNSWHI*GVFPLK
Trigger: TTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATT...TTGGCACAAGTCAGATGAAGCACGTTCTGCCGGGGAGGCCCTCACCTTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS CCA 90 bp GGGAGGCAGGATACAGACAGACGGACAGACAGAAAAATACAGAGGTaGAAGAGGGCAAGGGAAATTGGATGGGGCAGACAGAAAGGAATG +
Preference number: 5 (lower is better)
Translates to: GRQDTDRRTDRKIQR*KRAREIGWGRQKGM
Trigger: CATTCCTTTCTGTCTGCCCCATCCAATTTCCCTTGCCCTCTTCCACCTCTGTATTTTTCTGTCTGTCCGTCTGTCTGTATCCTGCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GACTGGGAAATTCTTGGCACATTTTGGGAGTCTTTCCGCTCAAATCCACCTACCACCTCCTCGAAGCGATaGGGCTTGGTGTGGATGAAC +
Preference number: 5 (lower is better)
Translates to: DWEILGTFWESFRSNPPTTSSKR*GLVWMN
Trigger: GTTCATCCACACCAAGCCCAATCGCTTCGAGGAGGT...GGTAGGTGGATTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATTTCCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp GTGAGAAAGCACACCTCCACGCGGGAAAATACCACATTCCACACACCGAAGACTTGCTTCTCCTTGCTGTaGAATTTGCTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: VRKHTSTRENTTFHTPKTCFSLL*NLLHTT
Trigger: GGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCA...AGTCTTCGGTGTGTGGAATGTGGTATTTTCCCGCGTGGAGGTGTGCTTTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp GAGGCCTGGGGAAAAGGCTGTCCTCGGACCACAATGAGGGCTTTGGTCAAACATAGATACTGCTTCTCCTaGCTGTTGAATTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: EAWGKGCPRTTMRALVKHRYCFS*LLNLLH
Trigger: GTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCT...ATGTTTGACCAAAGCCCTCATTGTGGTCCGAGGACAGCCTTTTCCCCAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAAGCCCCTATTCAAGTTaGGCACTAACACCCCACAAA +
Preference number: 5 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPSPYSS*ALTPHK
Trigger: TTTGTGGGGTGTTAGTGCCAAACTTGAATAGGGGCT...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS-3UTR CAA 90 bp CATCCTCTGTGGTCTGGTGGCCAAGGGTCACTGTATGTGAACACACCACTTCCAAGATACTGCTTCTCCTaGCTGTTGAATTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: HPLWSGGQGSLYVNTPLPRYCFS*LLNLLH
Trigger: GTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCT...TGGAAGTGGTGTGTTCACATACAGTGACCCTTGGCCACCAGACCACAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS-3UTR CAA 90 bp ACTCAGAGAAATGCGTCCTGGCCACGGGAAAATAAGCTTCCAGGCAGCATCAGGAATTCTTGGCACATTTaGGGAGTCTTTCCGCTCAAA +
Preference number: 5 (lower is better)
Translates to: TQRNASWPRENKLPGSIRNSWHI*GVFPLK
Trigger: TTTGAGCGGAAAGACTCCCAAAATGTGCCAAGAATT...CCTGATGCTGCCTGGAAGCTTATTTTCCCGTGGCCAGGACGCATTTCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302926.7
ENST00000640620.2
CDS GCA 72 bp AACCACACAGGCAGCATGATGGCGGGCAGCGCCCCGTaGAGGTTCTGCGGGCAGGCGGGCGGCAGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: NHTGSMMAGSAP*RFCGQAGGRVV
Trigger: CACCACCCTGCCGCCCGCCTGCCCGCAGAACCTGCACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CCA 72 bp CGTGGCGTAGGGCACGCCCAAGAACTGGCTCAGCCCTaGGGCCGTGGTGCCTCCATCCAGGGCTCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: RGVGHAQELAQP*GRGASIQGSEW
Trigger: CCACTCGGAGCCCTGGATGGAGGCACCACGGCCCCAGGGCTGAGCCAGTTCTTGGGCGTGCCCTACGCCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572893.1
ENST00000640833.1
CDS TCA 72 bp GGCCACGGTGACGCTCAGCTCCGTGGAGTAGTCCCGTaGGTCCCCGGGGAAGCGGTCATAGGCCCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: GHGDAQLRGVVP*VPGEAVIGPWA
Trigger: GGCCCAAGGGCCTATGACCGCTTCCCCGGGGACTCACGGGACTACTCCACGGAGCTGAGCGTCACCGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS GCA 72 bp GCAGGGTCCGCCCCGACGCCACCACCCCGCTTCAGCTaGAGTGACACCAGCTCCTCCTCTGGTGGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: AGSAPTPPPRFS*SDTSSSSGGSS
Trigger: TGAGCTGCCACCAGAGGAGGAGCTGGTGTCACTGCAGCTGAAGCGGGGTGGTGGCGTCGGGGCGGACCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CAA 72 bp ACGCCCAAGAACTGCACGACGGGGCCCAGGATCTCGTaGTTGAGCTCGCGCCGCACACCGCGCACTCGCCCG +
Preference number: 6 (lower is better)
Translates to: TPKNCTTGPRIS*LSSRRTPRTRP
Trigger: CGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCCGTCGTGCAGTTCTTGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS TCA 72 bp CCAAGAACTGCACGACGGGGCCCAGGATCTCGTTGTTaGGCTCGCGCCGCACACCGCGCACTCGCCCGTAGG +
Preference number: 6 (lower is better)
Translates to: PRTARRGPGSRC*ARAAHRALARR
Trigger: CCTACGGGCGAGTGCGCGGTGTGCGGCGCGAGCTCAACAACGAGATCCTGGGCCCCGTCGTGCAGTTCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS GCA 72 bp GGAGGCAGGCGCGTGGTGGTGGTGAAGAGCTCCGTGTaGAGGTTGTGCAGGTGGGGCACGAGCTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: GGRRVVVVKSSV*RLCRWGTSSSQ
Trigger: CTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCACACGGAGCTCTTCACCACCACCACGCGCCTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CCA 72 bp CCACCCACCCCCTATACCCGAGTGGTGGAGTGGGGGTaGGGTAGCGTGTTGTTGTGGCTGGTGGCGGTGGGA +
Preference number: 6 (lower is better)
Translates to: PPTPYTRVVEWG*GSVLLWLVAVG
Trigger: TCCCACCGCCACCAGCCACAACAACACGCTACCCCACCCCCACTCCACCACTCGGGTATAGGGGGTGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CAA 72 bp AGGCGCGTGGTGGTGGTGAAGAGCTCCGTGTGCAGGTaGTGCAGGTGGGGCACGAGCTCCAGCCAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RRVVVVKSSVCR*CRWGTSSSQKA
Trigger: GGCCTTCTGGCTGGAGCTCGTGCCCCACCTGCACAACCTGCACACGGAGCTCTTCACCACCACCACGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CCA 72 bp AGGGGGCAACGGGACAGGACTAGATTGAGGATCCGCTaGTTCCGTGGGCCGGCTTCGAGGGACCAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: RGQRDRTRLRIR*FRGPASRDQKA
Trigger: CGCCTTCTGGTCCCTCGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCCGTTGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS CAA 72 bp ACAGCTTCAGCGCTGTCCTCTCGGTCACAGCCCACCTaGGCTGCCAGCAGCCGCGTGTACTTGAGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: TASALSSRSQPT*AASSRVYLSGW
Trigger: CCAGCCGCTCAAGTACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCGAGAGGACAGCGCTGAAGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302926.7
ENST00000570940.1
ENST00000575301.5
ENST00000639647.1
ENST00000639804.1
ENST00000640620.2
CDS TCA 72 bp ATAGAGAAAGGAGGGGGCAACGGGACAGGACTAGATTaGGGATCCGCTGGTTCCGTGGGCCGGCTTCGAGGG +
Preference number: 6 (lower is better)
Translates to: IEKGGGNGTGLD*GSAGSVGRLRG
Trigger: CCCTCGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCCGTTGCCCCCTCCTTTCTCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS CAA 90 bp AGTAGGGACGATAGAGAAAGGAGGGGGCAACGGGACAGGACTAGATaGAGGATCCGCTGGTTCCGTGGGCCGGCTTCGAGGGACCAGAAG +
Preference number: 6 (lower is better)
Translates to: SRDDRERRGQRDRTR*RIRWFRGPASRDQK
Trigger: CTTCTGGTCCCTCGAAGCCGGCCCACGGAACCAGCGGATCCTCAATCTAGTCCTGTCCCGTTGCCCCCTCCTTTCTCTATCGTCCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575301.5
ENST00000639647.1
CDS CCA 72 bp GGCCACCTTGTTGGCGCGGTAGTTGTCACGCACGCGTaGCTTCAGGCCTATGTGCAGATACTGCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: GHLVGAVVVTHA*LQAYVQILLLL
Trigger: AAGGAGAAGCAGTATCTGCACATAGGCCTGAAGCCACGCGTGCGTGACAACTACCGCGCCAACAAGGTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CAA 90 bp TCACGCACGCGTGGCTTCAGGCCTATGTGCAGATACTGCTTCTCCTaGCTGTTGAATTTGCTCCACACCACCTCCTCGAAGCGATTGGGC +
Preference number: 6 (lower is better)
Translates to: SRTRGFRPMCRYCFS*LLNLLHTTSSKRLG
Trigger: GCCCAATCGCTTCGAGGAGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGGCCTGAAGCCACGCGTGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CAA 90 bp ACGCGTGGCTTCAGGCCTATGTGCAGATACTGCTTCTCCTTGCTGTaGAATTTGCTCCACACCACCTCCTCGAAGCGATTGGGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: TRGFRPMCRYCFSLL*NLLHTTSSKRLGLV
Trigger: CACCAAGCCCAATCGCTTCGAGGAGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGGCCTGAAGCCACGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS GCA 72 bp TCACGCACGCGTGGCTTCAGGCCTATGTGCAGATACTaGTTCTCCTTGCTGTTGAATTTGCTCCACACCACC +
Preference number: 6 (lower is better)
Translates to: SRTRGFRPMCRY*FSLLLNLLHTT
Trigger: GGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGGCCTGAAGCCACGCGTGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CAA 72 bp CCTATGTGCAGATACTGCTTCTCCTTGCTGTTGAATTaGCTCCACACCACCTCCTCGAAGCGATTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: PMCRYCFSLLLN*LHTTSSKRLGL
Trigger: CAAGCCCAATCGCTTCGAGGAGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2
CDS CAA 72 bp TTCAGGCCTATGTGCAGATACTGCTTCTCCTTGCTGTaGAATTTGCTCCACACCACCTCCTCGAAGCGATTG +
Preference number: 6 (lower is better)
Translates to: FRPMCRYCFSLL*NLLHTTSSKRL
Trigger: CAATCGCTTCGAGGAGGTGGTGTGGAGCAAATTCAACAGCAAGGAGAAGCAGTATCTGCACATAGGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302926.7
ENST00000575301.5
ENST00000639647.1
ENST00000640620.2