RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NLGN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169760

Ensembl transcript IDs: ENST00000361589.8, ENST00000401917.4, ENST00000413821.1, ENST00000415045.1, ENST00000423427.1, ENST00000457714.5, ENST00000466350.1, ENST00000469564.5, ENST00000469727.1, ENST00000482120.1, ENST00000490929.5

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGTTATTCCAGTCTGTATTCTCCACAACCCTTATCAAATGGAATTaGTTTCTGGCCTGCATCCAAATACAGCAACGTGCCAGAATAAAA +
Preference number: 1 (lower is better)
Translates to: RLFQSVFSTTLIKWN*FLACIQIQQRARIK
Trigger: TTTTATTCTGGCACGTTGCTGTATTTGGATGCAGGCCAGAAATCAATTCCATTTGATAAGGGTTGTGGAGAATACAGACTGGAATAACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR TCA 90 bp GCCACCAAATGTTTCATAGCAGTAGGAAATTTCTTTAGAGACTTCTaGTGGAAATTTGAAGTGTATGTTGCTATCAGATCAAGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: ATKCFIAVGNFFRDF*WKFEVYVAIRSSAG
Trigger: TCCTGCACTTGATCTGATAGCAACATACACTTCAAATTTCCATCAGAAGTCTCTAAAGAAATTTCCTACTGCTATGAAACATTTGGTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR TCA 90 bp TGTAAATATGGTCTACACAATAAAACGGCTCCAAATAAAAACTGGTaGAAATTATCTGACATTCCACTGGTGTGTCCCTTGTGCATATTC +
Preference number: 1 (lower is better)
Translates to: CKYGLHNKTAPNKNW*KLSDIPLVCPLCIF
Trigger: GAATATGCACAAGGGACACACCAGTGGAATGTCAGATAATTTTCACCAGTTTTTATTTGGAGCCGTTTTATTGTGTAGACCATATTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR TCA 90 bp CATTGGACTAATAGTCATTATCCAGATTATCTTTATTTCACACAATaGCCAGTGACATGGCCAAGATGTACAAAGTTGGTTCCATCAAGT +
Preference number: 1 (lower is better)
Translates to: HWTNSHYPDYLYFTQ*PVTWPRCTKLVPSS
Trigger: ACTTGATGGAACCAACTTTGTACATCTTGGCCATGTCACTGGTCATTGTGTGAAATAAAGATAATCTGGATAATGACTATTAGTCCAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR TCA 90 bp CCAAATACAGCAACGTGCCAGAATAAAATCAAATCAGAATGCTTATaGAAAAGAATCAAGTTGGCCACCAAATGTTTCATAGCAGTAGGA +
Preference number: 1 (lower is better)
Translates to: PNTATCQNKIKSECL*KRIKLATKCFIAVG
Trigger: TCCTACTGCTATGAAACATTTGGTGGCCAACTTGATTCTTTTTCATAAGCATTCTGATTTGATTTTATTCTGGCACGTTGCTGTATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR CCA 90 bp GATATACTGTTACTGGTAAACAACAGGGGGATGAAGAGTTTCCTGTaGTCTGAGAATATTCGTTTAAAATCACACATATGTGTAAGAAAG +
Preference number: 1 (lower is better)
Translates to: DILLLVNNRGMKSFL*SENIRLKSHICVRK
Trigger: CTTTCTTACACATATGTGTGATTTTAAACGAATATTCTCAGACCACAGGAAACTCTTCATCCCCCTGTTGTTTACCAGTAACAGTATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR TCA 90 bp CTAATAGTCATTATCCAGATTATCTTTATTTCACACAATGACCAGTaGCATGGCCAAGATGTACAAAGTTGGTTCCATCAAGTAGTATAC +
Preference number: 1 (lower is better)
Translates to: LIVIIQIIFISHNDQ*HGQDVQSWFHQVVY
Trigger: GTATACTACTTGATGGAACCAACTTTGTACATCTTGGCCATGTCACTGGTCATTGTGTGAAATAAAGATAATCTGGATAATGACTATTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTGGCAAATTTCAGCATaGGCCTTTGCTAAGGCCATT +
Preference number: 2 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKWQISA*AFAKAI
Trigger: AATGGCCTTAGCAAAGGCTCATGCTGAAATTTGCCA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR CAA 90 bp AATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTaGCAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACA +
Preference number: 2 (lower is better)
Translates to: NQSGNTGASSYHERL*QVTLWTHFTLPKGT
Trigger: TGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR CAA 90 bp ACGGTTATTCCAGTCTGTATTCTCCACAACCCTTATCAAATGGAATaGATTTCTGGCCTGCATCCAAATACAGCAACGTGCCAGAATAAA +
Preference number: 2 (lower is better)
Translates to: TVIPVCILHNPYQME*ISGLHPNTATCQNK
Trigger: TTTATTCTGGCACGTTGCTGTATTTGGATGCAGGCCAGAAATCAATTCCATTTGATAAGGGTTGTGGAGAATACAGACTGGAATAACCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTTAGGTTCTGCCAATTaGTGGAGGAAGCTTCTATTA +
Preference number: 2 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKLGSAN*WRKLLL
Trigger: TAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR GCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGATCTTCTTTAGGTTCTaGCAATTGATGGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKIFFRF*QLMEEA
Trigger: AGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGAT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATCCAAGGAATCTTCAGTaGTCGTTTACTGCAATCCAT +
Preference number: 2 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYPRNLQ*SFTAIH
Trigger: ATGGATTGCAGTAAACGATCACTGAAGATTCCTTGG...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACTGGTGAAAATTATCTaGCATTCCACTGGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVLVKII*HSTGVS
Trigger: GGACACACCAGTGGAATGTCAGATAATTTTCACCAG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATGGCAAATTTCAGCATaGGCCTTTGCTAAGGCCATT +
Preference number: 2 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVWQISA*AFAKAI
Trigger: AATGGCCTTAGCAAAGGCTCATGCTGAAATTTGCCA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR GCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGTTTGGTGTTCCACATaGCTAATTCCATTATGTAAC +
Preference number: 2 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKVWCST*LIPLCN
Trigger: GTTACATAATGGAATTAGGCATGTGGAACACCAAAC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTATCTGACATTCCACTaGTGTGTCCCTTGTGCATAT +
Preference number: 2 (lower is better)
Translates to: ISSTATKHINYHAHRAKNYLTFH*CVPCAY
Trigger: ATATGCACAAGGGACACACCAGTGGAATGTCAGATA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCTGGTGAAAATTATCTaGCATTCCACTGGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTLVKII*HSTGVS
Trigger: GGACACACCAGTGGAATGTCAGATAATTTTCACCAG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATATCTGACATTCCACTaGTGTGTCCCTTGTGCATAT +
Preference number: 2 (lower is better)
Translates to: SALSCQQDVYKSDIFNALYLTFH*CVPCAY
Trigger: ATATGCACAAGGGACACACCAGTGGAATGTCAGATA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATCCCACAACTTTATACTaGCAGCACTTATGTGATAAT +
Preference number: 2 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYPTTLY*QHLCDN
Trigger: ATTATCACATAAGTGCTGTCAGTATAAAGTTGTGGG...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGTGAGTAAATTCCAGTaGATGAACCTCAGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: SALSCQQDVYKSDIFNALVSKFQ*MNLSEK
Trigger: TTTCTCACTGAGGTTCATTCACTGGAATTTACTCAC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATACGTTGTACTCTACTaGGATTGCGTGAGTAAATTC +
Preference number: 2 (lower is better)
Translates to: SALSCQQDVYKSDIFNALYVVLY*DCVSKF
Trigger: GAATTTACTCACGCAATCTCAGTAGAGTACAACGTA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR-3UTR GCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGTTTGGTGTTCCACATaGCTAATTCCATTATGTAAC +
Preference number: 2 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYVWCST*LIPLCN
Trigger: GTTACATAATGGAATTAGGCATGTGGAACACCAAAC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGTAAATTCCAGTGAATaGACCTCAGTGAGAAAGATA +
Preference number: 2 (lower is better)
Translates to: SALSCQQDVYKSDIFNALVNSSE*TSVRKI
Trigger: TATCTTTCTCACTGAGGTTCATTCACTGGAATTTAC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTGAGTAAATTCCAGTaGATGAACCTCAGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVSKFQ*MNLSEK
Trigger: TTTCTCACTGAGGTTCATTCACTGGAATTTACTCAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTACGTTGTACTCTACTaGGATTGCGTGAGTAAATTC +
Preference number: 2 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRYVVLY*DCVSKF
Trigger: GAATTTACTCACGCAATCTCAGTAGAGTACAACGTA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR CAA 90 bp TTAAAATCACACATATGTGTAAGAAAGACTAAAATCCTCCAGATGTaGACTCTCCTAGGTTCTGTATCTACGTTGTACTCTACTGAGATT +
Preference number: 2 (lower is better)
Translates to: LKSHICVRKTKILQM*TLLGSVSTLYSTEI
Trigger: AATCTCAGTAGAGTACAACGTAGATACAGAACCTAGGAGAGTCAACATCTGGAGGATTTTAGTCTTTCTTACACATATGTGTGATTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCCCACAACTTTATACTaGCAGCACTTATGTGATAAT +
Preference number: 2 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRPTTLY*QHLCDN
Trigger: ATTATCACATAAGTGCTGTCAGTATAAAGTTGTGGG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAATGAAGAGTTTCCTGTaGTCTGAGAATATTCGTTTA +
Preference number: 2 (lower is better)
Translates to: SALSCQQDVYKSDIFNALMKSFL*SENIRL
Trigger: TAAACGAATATTCTCAGACCACAGGAAACTCTTCAT...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCCACTGGTGTGTCCCTaGTGCATATTCATAGTTGTT +
Preference number: 3 (lower is better)
Translates to: ISSTATKHINYHAHRAKNPLVCP*CIFIVV
Trigger: AACAACTATGAATATGCACAAGGGACACACCAGTGG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGTTGCAAGTAACTCTTaGGACACACTTCACCTTACC +
Preference number: 3 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYVASNS*DTLHLT
Trigger: GGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAAC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATAGGCCATTAACAGCATaGACGCTTTGTGTACTTATC +
Preference number: 3 (lower is better)
Translates to: ISSTATKHINYHAHRAKNRPLTA*TLCVLI
Trigger: GATAAGTACACAAAGCGTCAATGCTGTTAATGGCCT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGGTTCTGTATCTACGTaGTACTCTACTGAGATTGCG +
Preference number: 3 (lower is better)
Translates to: SALSCQQDVYKSDIFNALGSVST*YSTEIA
Trigger: CGCAATCTCAGTAGAGTACAACGTAGATACAGAACC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
3UTR TCA 72 bp GGTCTACACAATAAAACGGCTCCAAATAAAAACTGGTaGAAATTATCTGACATTCCACTGGTGTGTCCCTTG +
Preference number: 3 (lower is better)
Translates to: GLHNKTAPNKNW*KLSDIPLVCPL
Trigger: CAAGGGACACACCAGTGGAATGTCAGATAATTTTCACCAGTTTTTATTTGGAGCCGTTTTATTGTGTAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGTAAGTCTTGTAGGTaGAAAGCCAAGGAATCTTCA +
Preference number: 3 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYSKSCR*KAKESS
Trigger: TGAAGATTCCTTGGCTTTCAACCTACAAGACTTACT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTTTAGGTTCTGCCAATaGATGGAGGAAGCTTCTATT +
Preference number: 3 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYFRFCQ*MEEASI
Trigger: AATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTTGCAAGTAACTCTTaGGACACACTTCACCTTACC +
Preference number: 3 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVASNS*DTLHLT
Trigger: GGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGGTTCTGTATCTACGTaGTACTCTACTGAGATTGCG +
Preference number: 3 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRGSVST*YSTEIA
Trigger: CGCAATCTCAGTAGAGTACAACGTAGATACAGAACC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR TCA 72 bp GGTAAACAACAGGGGGATGAAGAGTTTCCTGTGGTCTaGGAATATTCGTTTAAAATCACACATATGTGTAAG +
Preference number: 3 (lower is better)
Translates to: GKQQGDEEFPVV*EYSFKITHMCK
Trigger: CTTACACATATGTGTGATTTTAAACGAATATTCTCAGACCACAGGAAACTCTTCATCCCCCTGTTGTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATAACAGCATTGACGCTTaGTGTACTTATCCAAATATG +
Preference number: 3 (lower is better)
Translates to: ISSTATKHINYHAHRAKNNSIDA*CTYPNM
Trigger: CATATTTGGATAAGTACACAAAGCGTCAATGCTGTT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGAGGCCATTAACAGCATaGACGCTTTGTGTACTTATC +
Preference number: 3 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRRPLTA*TLCVLI
Trigger: GATAAGTACACAAAGCGTCAATGCTGTTAATGGCCT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR CCA 72 bp TCCTCATATCATGAAAGACTGTTGCAAGTAACTCTTTaGACACACTTCACCTTACCAAAAGGAACAAAATAC +
Preference number: 3 (lower is better)
Translates to: SSYHERLLQVTL*THFTLPKGTKY
Trigger: GTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAACAGTCTTTCATGATATGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTAGTAAGTCTTGTAGGTaGAAAGCCAAGGAATCTTCA +
Preference number: 3 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTSKSCR*KAKESS
Trigger: TGAAGATTCCTTGGCTTTCAACCTACAAGACTTACT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTATAGTTCTTTCCTGTTaGGTGTTCCACATGCCTAAT +
Preference number: 3 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTIVLSC*VFHMPN
Trigger: ATTAGGCATGTGGAACACCAAACAGGAAAGAACTAT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCATAGTTCTTTCCTGTTaGGTGTTCCACATGCCTAAT +
Preference number: 3 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSIVLSC*VFHMPN
Trigger: ATTAGGCATGTGGAACACCAAACAGGAAAGAACTAT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGAACAGCATTGACGCTTaGTGTACTTATCCAAATATG +
Preference number: 3 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRNSIDA*CTYPNM
Trigger: CATATTTGGATAAGTACACAAAGCGTCAATGCTGTT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR TCA 72 bp AATAGTCATTATCCAGATTATCTTTATTTCACACAATaGCCAGTGACATGGCCAAGATGTACAAAGTTGGTT +
Preference number: 3 (lower is better)
Translates to: NSHYPDYLYFTQ*PVTWPRCTKLV
Trigger: AACCAACTTTGTACATCTTGGCCATGTCACTGGTCATTGTGTGAAATAAAGATAATCTGGATAATGACTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGAGTGAAGATCCGCTGTaGCTACAGCTGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKSEDPL*LQLVPP
Trigger: GGGTGGCACCAGCTGTAGCCACAGCGGATCTTCACT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTTGGCCACGTGCATCTaGGCAGTGCCATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYLATCI*AVPWSH
Trigger: GTGGGACCATGGCACTGCCCAGATGCACGTGGCCAA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGACACCATCACTGGTTTaGGACCCCCACTGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKTPSLV*DPHCPE
Trigger: TTCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGGAACCTCGTCTCCGTaGGCTGCATCAGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYGTSSP*AASAQA
Trigger: AGCTTGGGCTGATGCAGCCCACGGAGACGAGGTTCC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGGTAAGGCATTGTGTTaGGGCGGGCAGGAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVGKALC*GGQESV
Trigger: CACCGACTCCTGCCCGCCTCAACACAATGCCTTACC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGCGTGCATCTGGGCAGTaGCATGGTCCCACATTAGTT +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKRASGQ*HGPTLV
Trigger: AACTAATGTGGGACCATGGCACTGCCCAGATGCACG...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTGTGGCTACAGCTGGTaGCACCCACTGATGGTCCGT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNCGYSW*HPLMVR
Trigger: ACGGACCATCAGTGGGTGGCACCAGCTGTAGCCACA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACTCGTCTCCGTGGGCTaGATCAGCCCAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVLVSVG*ISPSWN
Trigger: GTTCCAGCTTGGGCTGATGCAGCCCACGGAGACGAG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGTGAAGATCCGCTGTaGCTACAGCTGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYSEDPL*LQLVPP
Trigger: GGGTGGCACCAGCTGTAGCCACAGCGGATCTTCACT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGGTGGTTCTGGAGGCTaGAAACGACGTTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNGGSGG*KRRSPV
Trigger: AACAGGGGAACGTCGTTTTCAGCCTCCAGAACCACC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGATAAAGTCAGCAGGTTaGCACATGAACCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKIKSAG*HMNPQH
Trigger: GTGCTGGGGGTTCATGTGTCAACCTGCTGACTTTAT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCTCGTCTCCGTGGGCTaGATCAGCCCAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTLVSVG*ISPSWN
Trigger: GTTCCAGCTTGGGCTGATGCAGCCCACGGAGACGAG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACACGATCCAGAATCCTaGGGACCCAAAGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVHDPES*GPKATS
Trigger: GGAGGTGGCTTTGGGTCCCCAGGATTCTGGATCGTG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTTGGCCACGTGCATCTaGGCAGTGCCATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSLATCI*AVPWSH
Trigger: GTGGGACCATGGCACTGCCCAGATGCACGTGGCCAA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATACGACGTTCCCCTGTTaGTGGGGCTGCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYTTFPC*WGCIWN
Trigger: GTTCCATATGCAGCCCCACCAACAGGGGAACGTCGT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGGAACCTCGTCTCCGTaGGCTGCATCAGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSGTSSP*AASAQA
Trigger: AGCTTGGGCTGATGCAGCCCACGGAGACGAGGTTCC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGGGTGGGGATGGGGATaGGGCAGAGTATTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYGWGWG*GRVLFC
Trigger: ACAGAACAATACTCTGCCCCATCCCCATCCCCACCC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCAGCAGGTTGACACATaGACCCCCAGCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTQQVDT*TPSTRS
Trigger: GGATCTGGTGCTGGGGGTTCATGTGTCAACCTGCTG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGGCAGTGGGAAAGGCTaGCGTGACAGGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNGSGKG*RDRYRI
Trigger: AATTCTGTACCTGTCACGTCAGCCTTTCCCACTGCC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATAATTTGGCCACGTaGATCTGGGCAGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYHNLAT*IWAVPW
Trigger: CCATGGCACTGCCCAGATGCACGTGGCCAAATTATG...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCCGGTGTACCAAGCATaGCATCACTGCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNPVYQA*HHCSPN
Trigger: GTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTGTGGCTACAGCTGGTaGCACCCACTGATGGTCCGT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSCGYSW*HPLMVR
Trigger: ACGGACCATCAGTGGGTGGCACCAGCTGTAGCCACA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTCTCCAAACATAATTTaGCCACGTGCATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKSPNII*PRASGQ
Trigger: CTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACATACAGAGAGTCAATaGGGCACCCAATCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVHTESQ*GTQSPV
Trigger: CACCGGGGATTGGGTGCCCCATTGACTCTCTGTATG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCACGTTCCCCTGTTGGTaGGGCTGCATATGGAACCCC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSTFPCW*GCIWNP
Trigger: GGGGTTCCATATGCAGCCCCACCAACAGGGGAACGT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGGGTGGGGATGGGGATaGGGCAGAGTATTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVGWGWG*GRVLFC
Trigger: ACAGAACAATACTCTGCCCCATCCCCATCCCCACCC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR CAA 72 bp GGTAATACGGGGGCATCCTCATATCATGAAAGACTGTaGCAAGTAACTCTTTGGACACACTTCACCTTACCA +
Preference number: 4 (lower is better)
Translates to: GNTGASSYHERL*QVTLWTHFTLP
Trigger: TGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
3UTR CAA 72 bp CCAGTCTGTATTCTCCACAACCCTTATCAAATGGAATaGATTTCTGGCCTGCATCCAAATACAGCAACGTGC +
Preference number: 4 (lower is better)
Translates to: PVCILHNPYQME*ISGLHPNTATC
Trigger: GCACGTTGCTGTATTTGGATGCAGGCCAGAAATCAATTCCATTTGATAAGGGTTGTGGAGAATACAGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTGTCGAGAAAAGCTCTaGAAGATCTTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKCREKL*KIFRQQ
Trigger: CTGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGACA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGGCATTTCTGATATCTaGCCAGGGAGATGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYGISDI*PGRWWF
Trigger: GAACCACCATCTCCCTGGTCAGATATCAGAAATGCC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGATTGAGTGGCATTTCTaGTATCTGACCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKIEWHF*YLTREM
Trigger: CATCTCCCTGGTCAGATATCAGAAATGCCACTCAAT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTTCCCCTTTGCAGCCTaGTCGCCTGTACTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNFPFAA*SPVLKK
Trigger: TTTCTTGAGTACAGGCGATCAGGCTGCAAAGGGGAA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTACTGGTTTCAGGGTTATaGCGGTCAGCCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALLVSGL*RSAQSV
Trigger: TACTGACTGGGCTGACCGTCATAACCCTGAAACCAG...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGGCAGTGGGAAAGGCTaGCGTGACAGGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVGSGKG*RDRYRI
Trigger: AATTCTGTACCTGTCACGTCAGCCTTTCCCACTGCC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTCACACAATGACCAGTaGCATGGCCAAGATGTACAA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKSHNDQ*HGQDVQ
Trigger: TTGTACATCTTGGCCATGTCACTGGTCATTGTGTGA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGCACAAATTTGGAACTTaGGTGGCCTCAAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKHKFGT*VASSFT
Trigger: TGTGAAGCTTGAGGCCACTCAAGTTCCAAATTTGTG...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTATCTGCCACTCCAGTaGGCCCTGGGGGATTTGTCA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTYLPLQ*ALGDLS
Trigger: TGACAAATCCCCCAGGGCTCACTGGAGTGGCAGATA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACGTGCATCTGGGCAGTaGCATGGTCCCACATTAGTT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVRASGQ*HGPTLV
Trigger: AACTAATGTGGGACCATGGCACTGCCCAGATGCACG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTACCGGTGTACCAAGCATaGCATCACTGCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALPVYQA*HHCSPN
Trigger: GTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGG...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCATACAGAGAGTCAATaGGGCACCCAATCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTHTESQ*GTQSPV
Trigger: CACCGGGGATTGGGTGCCCCATTGACTCTCTGTATG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTACGACGTTCCCCTGTTaGTGGGGCTGCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTTTFPC*WGCIWN
Trigger: GTTCCATATGCAGCCCCACCAACAGGGGAACGTCGT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGAGGCAGTCTTCGCTCTaGTCTTGCACATATGATGAA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKRQSSL*SCTYDE
Trigger: TTCATCATATGTGCAAGACCAGAGCGAAGACTGCCT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTACACCATCACTGGTTTaGGACCCCCACTGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTTPSLV*DPHCPE
Trigger: TTCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGATATACACCATCACTaGTTTGGGACCCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNDIHHH*FGTPTV
Trigger: GACAGTGGGGGTCCCAAACCAGTGATGGTGTATATC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATCGTGTCTTGAGGGACTaGTTGATTTGGGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYRVLRD*LIWVTS
Trigger: ACTGGTGACCCAAATCAACCAGTCCCTCAAGACACG...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCCGGTCCCTTTGCAATaGTTCAAGGAGACGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRPVPLQ*FKETVS
Trigger: AGAGACCGTCTCCTTGAATCATTGCAAAGGGACCGG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGGCAAGAGTGGGCATTaGCTGCAGATTTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNGKSGH*LQISLL
Trigger: TAAGAGAGAAATCTGCAGTCAATGCCCACTCTTGCC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATTCCCCTTTGCAGCCTaGTCGCCTGTACTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALFPFAA*SPVLKK
Trigger: TTTCTTGAGTACAGGCGATCAGGCTGCAAAGGGGAA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGAAAAAGTCCTTTGGTTaGATTGCTCCAACGGTTACC +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKKKSFG*IAPTVT
Trigger: GGTAACCGTTGGAGCAATTCAACCAAAGGACTTTTT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCTGGTTTCAGGGTTATaGCGGTCAGCCCAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLVSGL*RSAQSV
Trigger: TACTGACTGGGCTGACCGTCATAACCCTGAAACCAG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGGGCTGCATCTCCTGTaGACATCATGTCTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVGLHLL*TSCLLL
Trigger: TAAGAGGAGACATGATGTTCACAGGAGATGCAGCCC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCATAATTTGGCCACGTaGATCTGGGCAGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRHNLAT*IWAVPW
Trigger: CCATGGCACTGCCCAGATGCACGTGGCCAAATTATG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGCAAGCATGCCATCACTaGTCTCCAAACATAATTTGG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKQACHH*SPNIIW
Trigger: CCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTG...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCCCTGTTGGTGGGGCTaGATATGGAACCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTPCWWG*IWNPKK
Trigger: TTTCTTGGGGTTCCATATGCAGCCCCACCAACAGGG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCCCTGTTGGTGGGGCTaGATATGGAACCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSPCWWG*IWNPKK
Trigger: TTTCTTGGGGTTCCATATGCAGCCCCACCAACAGGG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATCCATAGTTCCCCTTTaGAGCCTGATCGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVSIVPL*SLIACT
Trigger: AGTACAGGCGATCAGGCTGCAAAGGGGAACTATGGA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATCCATAGTTCCCCTTTaGAGCCTGATCGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALSIVPL*SLIACT
Trigger: AGTACAGGCGATCAGGCTGCAAAGGGGAACTATGGA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGTTGGTAGCCACCAGTaGGTCCACATCATCCAATTT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYVGSHQ*VHIIQF
Trigger: AAATTGGATGATGTGGACCCACTGGTGGCTACCAAC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGGGAGATGGTGGTTCTaGAGGCTGAAAACGACGTTC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSGRWWF*RLKTTF
Trigger: GAACGTCGTTTTCAGCCTCCAGAACCACCATCTCCC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGGGAGATGGTGGTTCTaGAGGCTGAAAACGACGTTC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTGRWWF*RLKTTF
Trigger: GAACGTCGTTTTCAGCCTCCAGAACCACCATCTCCC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTATCTGGGGGTCGTCTaGTATTACATCACCATCAAT +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKYLGVV*YYITIN
Trigger: ATTGATGGTGATGTAATACCAGACGACCCCCAGATA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTATCTGGCTATACCCTaGTTGTTGAATGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKYLAIP*LLNVNG
Trigger: CCCATTCACATTCAACAACCAGGGTATAGCCAGATA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCACTCCAGTGAGCCCTaGGGGATTTGTCACAAATTT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNHSSEP*GICHKF
Trigger: AAATTTGTGACAAATCCCCCAGGGCTCACTGGAGTG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGGCATTTCTGATATCTaGCCAGGGAGATGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSGISDI*PGRWWF
Trigger: GAACCACCATCTCCCTGGTCAGATATCAGAAATGCC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATATTGAGTGGCATTTCTaGTATCTGACCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNIEWHF*YLTREM
Trigger: CATCTCCCTGGTCAGATATCAGAAATGCCACTCAAT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGACCACACAGGAAGCATaGCTTCTGGCAATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRTTQEA*LLAICH
Trigger: ATGGCAGATTGCCAGAAGTCATGCTTCCTGTGTGGT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTACCACACAGGAAGCATaGCTTCTGGCAATCTGCCAT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTTTQEA*LLAICH
Trigger: ATGGCAGATTGCCAGAAGTCATGCTTCCTGTGTGGT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCATAAAGTCAGCAGGTTaGCACATGAACCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSIKSAG*HMNPQH
Trigger: GTGCTGGGGGTTCATGTGTCAACCTGCTGACTTTAT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGCATATTTTGCAGGTTaGAAACTAACAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYAYFAG*KLTAQL
Trigger: CAGCTGGGCTGTTAGTTTTCAACCTGCAAAATATGC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGTCCCTTTGATCCACTaGAAATGGACTTGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYVPLIH*KWTWLL
Trigger: CAACAACCAAGTCCATTTTCAGTGGATCAAAGGGAC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGACACTCAGCTCTGTTaGGTAGTCCCTTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRDTQLC*VVPLIH
Trigger: GTGGATCAAAGGGACTACTCAACAGAGCTGAGTGTC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGTTCAGAAACAGCAGTaGTGCTCCAACTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYVQKQQ*CSNCNS
Trigger: ACTATTGCAGTTGGAGCATCACTGCTGTTTCTGAAC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGGGCTGCATCTCCTGTaGACATCATGTCTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRGLHLL*TSCLLL
Trigger: TAAGAGGAGACATGATGTTCACAGGAGATGCAGCCC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAATGTGTGTAAGGGCTaGATCCCTGGTATAGTGTTG +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYNVCKG*IPGIVL
Trigger: CAACACTATACCAGGGATTCAGCCCTTACACACATT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTGGCAAATTTCAGCATaGGCCTTTGCTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNWQISA*AFAKAI
Trigger: AATGGCCTTAGCAAAGGCTCATGCTGAAATTTGCCA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTACGTTGTACTCTACTaGGATTGCGTGAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKYVVLY*DCVSKF
Trigger: GAATTTACTCACGCAATCTCAGTAGAGTACAACGTA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTTTCCCCGGTCCCTTTaGAATGATTCAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRFPRSL*NDSRRR
Trigger: CCGTCTCCTTGAATCATTGCAAAGGGACCGGGGAAA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTGTTTGGGATCATCCTaGTTGGCAGTGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRCLGSS*LAVGKA
Trigger: AGCCTTTCCCACTGCCAAGCAGGATGATCCCAAACA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTGTTTGGGATCATCCTaGTTGGCAGTGGGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTCLGSS*LAVGKA
Trigger: AGCCTTTCCCACTGCCAAGCAGGATGATCCCAAACA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGCAGTGTGGCAAGAGTaGGCATTGACTGCAGATTTC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTAVWQE*ALTADF
Trigger: GAAATCTGCAGTCAATGCCCACTCTTGCCACACTGC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAATCTGGGCAGTGCCATaGTCCCACATTAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVIWAVP*SHISCL
Trigger: TAGACAACTAATGTGGGACCATGGCACTGCCCAGAT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGTTGGTAGCCACCAGTaGGTCCACATCATCCAATTT +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALVGSHQ*VHIIQF
Trigger: AAATTGGATGATGTGGACCCACTGGTGGCTACCAAC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGATATACACCATCACTaGTTTGGGACCCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTDIHHH*FGTPTV
Trigger: GACAGTGGGGGTCCCAAACCAGTGATGGTGTATATC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGTTGAAAAAGTCCTTTaGTTGAATTGCTCCAACGGT +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKVEKVL*LNCSNG
Trigger: ACCGTTGGAGCAATTCAACCAAAGGACTTTTTCAAC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCGTGTCTTGAGGGACTaGTTGATTTGGGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSRVLRD*LIWVTS
Trigger: ACTGGTGACCCAAATCAACCAGTCCCTCAAGACACG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTCCTCTTCTTGTGCATaGGTTAGATCATTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKSSSCA*VRSLVV
Trigger: TACTACCAATGATCTAACCCATGCACAAGAAGAGGA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTTGCAAGTAACTCTTTaGACACACTTCACCTTACCA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKLQVTL*THFTLP
Trigger: TGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGATTTGTCACAAATTTaGAACTTGAGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKDLSQI*NLSGLK
Trigger: CTTGAGGCCACTCAAGTTCCAAATTTGTGACAAATC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGGCAAGAGTGGGCATTaGCTGCAGATTTCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSGKSGH*LQISLL
Trigger: TAAGAGAGAAATCTGCAGTCAATGCCCACTCTTGCC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGCAGATATCTCCCATTaGTTTCACATGTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYADISH*FHMYWS
Trigger: GCTCCAATACATGTGAAATCAATGGGAGATATCTGC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATGTCGAGAAAAGCTCTaGAAGATCTTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVCREKL*KIFRQQ
Trigger: CTGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGACA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGCAATCTGCCATCAATaGTATTCTGGGGACACACAG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRAICHQ*YSGDTQ
Trigger: CTGTGTGTCCCCAGAATATCATTGATGGCAGATTGC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGCAATCTGCCATCAATaGTATTCTGGGGACACACAG +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTAICHQ*YSGDTQ
Trigger: CTGTGTGTCCCCAGAATATCATTGATGGCAGATTGC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGTACCTTCCATATATaGGCCACCATGGATATACAC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYSTFHI*ATMDIH
Trigger: GTGTATATCCATGGTGGCTCATATATGGAAGGTACT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACAGATCCAAAAACAGTaGTTCTTAAGGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVQIQKQ*FLRGHH
Trigger: GTGGTGACCCCTTAAGAATCACTGTTTTTGGATCTG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGCATATTTTGCAGGTTaGAAACTAACAGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVAYFAG*KLTAQL
Trigger: CAGCTGGGCTGTTAGTTTTCAACCTGCAAAATATGC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGAACCAAAGTTTGAGTaGAGATCCGCTGTGGCTACA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTEPKFE*RSAVAT
Trigger: TGTAGCCACAGCGGATCTTCACTCAAACTTTGGTTC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGACTGAGAAATGTCATTaGGATTATGCAGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKTEKCH*DYADEV
Trigger: TACCTCATCTGCATAATCTCAATGACATTTCTCAGT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGTAAATTCCAGTGAATaGACCTCAGTGAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKVNSSE*TSVRKI
Trigger: TATCTTTCTCACTGAGGTTCATTCACTGGAATTTAC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATCACACAATGACCAGTaGCATGGCCAAGATGTACAA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVSHNDQ*HGQDVQ
Trigger: TTGTACATCTTGGCCATGTCACTGGTCATTGTGTGA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCTTTATTTCACACAATaGCCAGTGACATGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNLYFTQ*PVTWPR
Trigger: TCTTGGCCATGTCACTGGTCATTGTGTGAAATAAAG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGAGTGTGGCAAGAGGTaGAATAACTGTTGTTACAGA +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYECGKR*NNCCYR
Trigger: TCTGTAACAACAGTTATTTCACCTCTTGCCACACTC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAATACGTATGTCAGGATaGGTGTGGCAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVIRMSG*VWQEVK
Trigger: TTTCACCTCTTGCCACACTCATCCTGACATACGTAT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGCTTCTGATGGAAATTTaGAGTGTATGTTGCTATCAG +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKLLMEI*SVCCYQ
Trigger: CTGATAGCAACATACACTTCAAATTTCCATCAGAAG...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTAAGGCACTTAAGCCCTaGACACGGTTATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTKALKP*TRLFQS
Trigger: AGACTGGAATAACCGTGTGCAGGGCTTAAGTGCCTT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATCCATATTAGCAGTGTaGCAAGAGTGGGCATTGACT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVSILAV*QEWALT
Trigger: AGTCAATGCCCACTCTTGCCACACTGCTAATATGGA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATCCATATTAGCAGTGTaGCAAGAGTGGGCATTGACT +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALSILAV*QEWALT
Trigger: AGTCAATGCCCACTCTTGCCACACTGCTAATATGGA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTCTCCAAACATAATTTaGCCACGTGCATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSPNII*PRASGQ
Trigger: CTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATGGTGGGGCTGCATATaGAACCCCAAGAAATTGAAT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVWWGCI*NPKKLN
Trigger: ATTCAATTTCTTGGGGTTCCATATGCAGCCCCACCA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGGGACTGGTTGATTTaGGTCACCAGTTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYRDWLI*VTSFSK
Trigger: TTTGCTAAAACTGGTGACCCAAATCAACCAGTCCCT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTCAGTGTGCTTCATTTaGAGGGACATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNSVCFI*RDMISS
Trigger: AGAGGAAATCATGTCCCTCCAAATGAAGCACACTGA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCCTCATGTGGATGAATaGACTCACATTCATGATCCA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNPHVDE*THIHDP
Trigger: TGGATCATGAATGTGAGTCCATTCATCCACATGAGG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTATCTGGCTATACCCTaGTTGTTGAATGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNYLAIP*LLNVNG
Trigger: CCCATTCACATTCAACAACCAGGGTATAGCCAGATA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCAGATCCAAAAACAGTaGTTCTTAAGGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTQIQKQ*FLRGHH
Trigger: GTGGTGACCCCTTAAGAATCACTGTTTTTGGATCTG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGTCAAAATCACTAGCTaGTATACCATCATCGCTATC +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNVKITS*YTIIAI
Trigger: GATAGCGATGATGGTATATCAGCTAGTGATTTTGAC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTTGAGATTATGCAGATaGGGTACCAACTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTLRLCR*GTNSNQ
Trigger: CTGGTTGGAGTTGGTACCTCATCTGCATAATCTCAA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTTGAGATTATGCAGATaGGGTACCAACTCCAACCAG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLRLCR*GTNSNQ
Trigger: CTGGTTGGAGTTGGTACCTCATCTGCATAATCTCAA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTCCCTTTGATCCACTaGAAATGGACTTGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVPLIH*KWTWLL
Trigger: CAACAACCAAGTCCATTTTCAGTGGATCAAAGGGAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTTCAGAAACAGCAGTaGTGCTCCAACTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVQKQQ*CSNCNS
Trigger: ACTATTGCAGTTGGAGCATCACTGCTGTTTCTGAAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAATGTGTGTAAGGGCTaGATCCCTGGTATAGTGTTG +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSNVCKG*IPGIVL
Trigger: CAACACTATACCAGGGATTCAGCCCTTACACACATT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTGGCAAATTTCAGCATaGGCCTTTGCTAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTWQISA*AFAKAI
Trigger: AATGGCCTTAGCAAAGGCTCATGCTGAAATTTGCCA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGGCATCCTCATATCATaGAAGACTGTTGCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVGILIS*KTVASN
Trigger: GTTACTTGCAACAGTCTTTCATGATATGAGGATGCC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTACGTTGTACTCTACTaGGATTGCGTGAGTAAATTC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYYVVLY*DCVSKF
Trigger: GAATTTACTCACGCAATCTCAGTAGAGTACAACGTA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATGTCCAAACACAAACTaGATCATGACAACCCAATGG +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALCPNTN*IMTTQW
Trigger: CCATTGGGTTGTCATGATTCAGTTTGTGTTTGGACA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTCAAATCCAGTTAGCTaGAGGTCTATATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSNPVS*RSISLS
Trigger: GCTGAGGGATATAGACCTGCAGCTAACTGGATTTGA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGTCCTTTGGTTGAATTaGTCCAACGGTTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTVLWLN*SNGYLQ
Trigger: CTGAAGGTAACCGTTGGAGCAATTCAACCAAAGGAC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTTGAGAAACTCTCCTTaGTCCATCAATATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTLRNSP*SINIWG
Trigger: CCCCCAGATATTGATGGAGCAAGGAGAGTTTCTCAA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTTGAGAAACTCTCCTTaGTCCATCAATATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLRNSP*SINIWG
Trigger: CCCCCAGATATTGATGGAGCAAGGAGAGTTTCTCAA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGTATTTATCAGGATGTaGTCTTTAAGTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKVFIRM*SLSPSH
Trigger: ATGAGATGGACTTAAAGAGCACATCCTGATAAATAC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATCAAATCCAGTTAGCTaGAGGTCTATATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVSNPVS*RSISAT
Trigger: AGTGGCAGATATAGACCTGCAGCTAACTGGATTTGA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTGGTGGGGCTGCATATaGAACCCCAAGAAATTGAAT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTWWGCI*NPKKLN
Trigger: ATTCAATTTCTTGGGGTTCCATATGCAGCCCCACCA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACCATCAATGATATTCTaGGGACACACAGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVPSMIF*GHTGAN
Trigger: ATTTGCTCCTGTGTGTCCCCAGAATATCATTGATGG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAGGAAGCATGACTTCTaGCAATCTGCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVRKHDF*QSAIND
Trigger: ATCATTGATGGCAGATTGCCAGAAGTCATGCTTCCT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTAGGCAGTCTTCGCTCTaGTCTTGCACATATGATGAA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTRQSSL*SCTYDE
Trigger: TTCATCATATGTGCAAGACCAGAGCGAAGACTGCCT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATATATATGAGCCACCATaGATATACACCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNIYEPP*IYTITG
Trigger: ACCAGTGATGGTGTATATCCATGGTGGCTCATATAT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTATGTGGTATCGAGCTaGTTGAATATCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYYVVSS*LNILVN
Trigger: GTTGACCAAGATATTCAACCAGCTCGATACCACATA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAGGGACTGGTTGATTTaGGTCACCAGTTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVRDWLI*VTSFSK
Trigger: TTTGCTAAAACTGGTGACCCAAATCAACCAGTCCCT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCTTTCTGGGAATATCTaGTCCATGCTACTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNLSGNI*SMLLLQ
Trigger: TTGAAGAAGTAGCATGGACCAGATATTCCCAGAAAG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAATTTGGAACTTGAGTaGCCTCAAGCTTCACAGGTA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVNLELE*PQASQV
Trigger: TACCTGTGAAGCTTGAGGCCACTCAAGTTCCAAATT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATAATGGAATTGATTTCTaGCCTGCATCCAAATACAGC +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNNGIDF*PASKYS
Trigger: GCTGTATTTGGATGCAGGCCAGAAATCAATTCCATT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGCAGATATCTCCCATTaGTTTCACATGTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTADISH*FHMYWS
Trigger: GCTCCAATACATGTGAAATCAATGGGAGATATCTGC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTAAAAAGTCCTTTGGTTaGATTGCTCCAACGGTTACC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTKKSFG*IAPTVT
Trigger: GGTAACCGTTGGAGCAATTCAACCAAAGGACTTTTT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTGGTATCGAGCTGGTTaGATATCTTGGTCAACAAGT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTWYRAG*ISWSTS
Trigger: ACTTGTTGACCAAGATATTCAACCAGCTCGATACCA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTGGTATCGAGCTGGTTaGATATCTTGGTCAACAAGT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRWYRAG*ISWSTS
Trigger: ACTTGTTGACCAAGATATTCAACCAGCTCGATACCA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATACATTATATCATAGTTaGGAAACTCTCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNTLYHS*ETLLAP
Trigger: TGGAGCAAGGAGAGTTTCTCAACTATGATATAATGT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATACATTATATCATAGTTaGGAAACTCTCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYTLYHS*ETLLAP
Trigger: TGGAGCAAGGAGAGTTTCTCAACTATGATATAATGT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTGGGTTTGGTATGAATaGATTTCGTGTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTWVWYE*ISCLEG
Trigger: TCCCTCAAGACACGAAATTCATTCATACCAAACCCA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTGGGTTTGGTATGAATaGATTTCGTGTCTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSWVWYE*ISCLEG
Trigger: TCCCTCAAGACACGAAATTCATTCATACCAAACCCA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGAAAGTGATGTCAGTTaGTGGCACTTTAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALESDVS*WHFSCC
Trigger: ACAACAACTAAAGTGCCATCAACTGACATCACTTTC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCCAAGGAATCTTCAGTaGTCGTTTACTGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRPRNLQ*SFTAIH
Trigger: ATGGATTGCAGTAAACGATCACTGAAGATTCCTTGG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCCCACAACTTTATACTaGCAGCACTTATGTGATAAT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNPTTLY*QHLCDN
Trigger: ATTATCACATAAGTGCTGTCAGTATAAAGTTGTGGG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGGCATCCTCATATCATaGAAGACTGTTGCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTGILIS*KTVASN
Trigger: GTTACTTGCAACAGTCTTTCATGATATGAGGATGCC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCTTTATTTCACACAATaGCCAGTGACATGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLYFTQ*PVTWPR
Trigger: TCTTGGCCATGTCACTGGTCATTGTGTGAAATAAAG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATAGATTGGTAGGTAGATaGTATAAATATGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNRLVGR*YKYGHR
Trigger: ACGATGGCCATATTTATATCATCTACCTACCAATCT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATTATCACGTGACTGGTaGACAACAATTAAACCTAGG +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVLSRDW*TTIKPR
Trigger: CCTAGGTTTAATTGTTGTTCACCAGTCACGTGATAA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAACACTCATTCACAATaGCTTTATCACGTGACTGGT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVNTHSQ*LYHVTG
Trigger: ACCAGTCACGTGATAAAGTCATTGTGAATGAGTGTT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATACACAAACTGAATCATaGCAACCCAATGGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNTQTES*QPNGLF
Trigger: AAAAAGACCATTGGGTTGTCATGATTCAGTTTGTGT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGTTACTTCTTTCGGCTaGAATCAGATAATCCTACTA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNVTSFG*NQIILL
Trigger: TAGTAGGATTATCTGATTGCAGCCGAAAGAAGTAAC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS-3UTR GCA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATAGAGTGGGCATTGACTaGAGATTTCTCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: ISSTATKHINYHAHRAKNRVGID*RFLSYK
Trigger: TTTATAAGAGAGAAATCTGCAGTCAATGCCCACTCT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTCTTCGCTCTGGTCTTaGACATATGATGAAACCACA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSSLWS*TYDETT
Trigger: TGTGGTTTCATCATATGTGCAAGACCAGAGCGAAGA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTCTTCGCTCTGGTCTTaGACATATGATGAAACCACA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTSSLWS*TYDETT
Trigger: TGTGGTTTCATCATATGTGCAAGACCAGAGCGAAGA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTGCTATCAGATCAAGTaGAGGAGAGGTATAAGGCTA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTCYQIK*RRGIRL
Trigger: TAGCCTTATACCTCTCCTGCACTTGATCTGATAGCA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCCATCAATGATATTCTaGGGACACACAGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSPSMIF*GHTGAN
Trigger: ATTTGCTCCTGTGTGTCCCCAGAATATCATTGATGG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAGGAAGCATGACTTCTaGCAATCTGCCATCAATGAT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSRKHDF*QSAIND
Trigger: ATCATTGATGGCAGATTGCCAGAAGTCATGCTTCCT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTATCTGGGGGTCGTCTaGTATTACATCACCATCAAT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRYLGVV*YYITIN
Trigger: ATTGATGGTGATGTAATACCAGACGACCCCCAGATA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTTTAACCCTTCCCCTTaGTTCACTCCTAACATTATA +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYFNPSP*FTPNII
Trigger: TATAATGTTAGGAGTGAACCAAGGGGAAGGGTTAAA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGTAATGTCTTTCTTCTaGTTTCAGGGTTATGACGGT +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVVMSFF*FQGYDG
Trigger: ACCGTCATAACCCTGAAACCAGAAGAAAGACATTAC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATCCTCTTCTTGTGCATaGGTTAGATCATTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALSSSCA*VRSLVV
Trigger: TACTACCAATGATCTAACCCATGCACAAGAAGAGGA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTCAGTGTGCTTCATTTaGAGGGACATGATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSVCFI*RDMISS
Trigger: AGAGGAAATCATGTCCCTCCAAATGAAGCACACTGA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCCTCATGTGGATGAATaGACTCACATTCATGATCCA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRPHVDE*THIHDP
Trigger: TGGATCATGAATGTGAGTCCATTCATCCACATGAGG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTATCTGACATTCCACTaGTGTGTCCCTTGTGCATAT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSYLTFH*CVPCAY
Trigger: ATATGCACAAGGGACACACCAGTGGAATGTCAGATA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATTGCAAGTAACTCTTTaGACACACTTCACCTTACCA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVLQVTL*THFTLP
Trigger: TGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTTGTCTGGTTACAGTaGGGCAAACGTATTTATATC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVVWLQ*GKRIYI
Trigger: GATATAAATACGTTTGCCTCACTGTAACCAGACAAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGTTGTCTGGTTACAGTaGGGCAAACGTATTTATATC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTVVWLQ*GKRIYI
Trigger: GATATAAATACGTTTGCCTCACTGTAACCAGACAAC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGTCAAAATCACTAGCTaGTATACCATCATCGCTATC +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTVKITS*YTIIAI
Trigger: GATAGCGATGATGGTATATCAGCTAGTGATTTTGAC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGAAAGTGATGTCAGTTaGTGGCACTTTAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSESDVS*WHFSCC
Trigger: ACAACAACTAAAGTGCCATCAACTGACATCACTTTC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTTAGGTTCTGCCAATTaGTGGAGGAAGCTTCTATTA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSLGSAN*WRKLLL
Trigger: TAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTTAGGTTCTGCCAATTaGTGGAGGAAGCTTCTATTA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTLGSAN*WRKLLL
Trigger: TAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATTTTGTCATGCAGCATaGGTAAATCAAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVFCHAA*VNQRTQ
Trigger: CTGAGTTCTTTGATTTACTCATGCTGCATGACAAAA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTGAGTAAATTCCAGTaGATGAACCTCAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVSKFQ*MNLSEK
Trigger: TTTCTCACTGAGGTTCATTCACTGGAATTTACTCAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGTGAAACTATTTCAGTaGAACTCGCCAAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVVKLFQ*NSPKKR
Trigger: TCTTTTCTTTGGCGAGTTTCACTGAAATAGTTTCAC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGGAATATCTGGTCCATaGTACTTCTTCAAAACGGTT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSGISGP*YFFKTV
Trigger: AACCGTTTTGAAGAAGTAGCATGGACCAGATATTCC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGTTTGGTGTTCCACATaGCTAATTCCATTATGTAAC +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVVWCST*LIPLCN
Trigger: GTTACATAATGGAATTAGGCATGTGGAACACCAAAC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGTTTGGTGTTCCACATaGCTAATTCCATTATGTAAC +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALVWCST*LIPLCN
Trigger: GTTACATAATGGAATTAGGCATGTGGAACACCAAAC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGATCTTCTTTAGGTTCTaGCAATTGATGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRIFFRF*QLMEEA
Trigger: AGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGAT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCATCTTCTTTAGGTTCTaGCAATTGATGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSIFFRF*QLMEEA
Trigger: AGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGAT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATATACTCAGATTTTCTaGTTTGAGTTGCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SALSCQQDVYKSDIFNALYTQIF*FELPAR
Trigger: TCTTGCTGGCAACTCAAAGCAGAAAATCTGAGTATA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATATCTCAGCAGGGAAGTaGCCATTAATTGAATTTATT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYISAGK*PLIEFI
Trigger: AATAAATTCAATTAATGGGCACTTCCCTGCTGAGAT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGATATATGAGCCACCATaGATATACACCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRIYEPP*IYTITG
Trigger: ACCAGTGATGGTGTATATCCATGGTGGCTCATATAT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTTGAAAAAGTCCTTTaGTTGAATTGCTCCAACGGT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVEKVL*LNCSNG
Trigger: ACCGTTGGAGCAATTCAACCAAAGGACTTTTTCAAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTATGTGGTATCGAGCTaGTTGAATATCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRYVVSS*LNILVN
Trigger: GTTGACCAAGATATTCAACCAGCTCGATACCACATA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATTTAACCCTTCCCCTTaGTTCACTCCTAACATTATA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVFNPSP*FTPNII
Trigger: TATAATGTTAGGAGTGAACCAAGGGGAAGGGTTAAA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTAATGTCTTTCTTCTaGTTTCAGGGTTATGACGGT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVMSFF*FQGYDG
Trigger: ACCGTCATAACCCTGAAACCAGAAGAAAGACATTAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCTTTCTGGGAATATCTaGTCCATGCTACTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTLSGNI*SMLLLQ
Trigger: TTGAAGAAGTAGCATGGACCAGATATTCCCAGAAAG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGTATGTAGATCACTCTaGATTTTGAAGACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYVCRSL*ILKTFA
Trigger: AGCAAAAGTCTTCAAAATCCAGAGTGATCTACATAC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGATCTTAAAGCTTGTATaGGATCAAGGAGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRILKLV*DQGVHS
Trigger: ACTATGGACTCCTTGATCTCATACAAGCTTTAAGAT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTATCTTAAAGCTTGTATaGGATCAAGGAGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTILKLV*DQGVHS
Trigger: ACTATGGACTCCTTGATCTCATACAAGCTTTAAGAT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTTTTGTCATGCAGCATaGGTAAATCAAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRFCHAA*VNQRTQ
Trigger: CTGAGTTCTTTGATTTACTCATGCTGCATGACAAAA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTAAATTCCAGTGAATaGACCTCAGTGAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVNSSE*TSVRKI
Trigger: TATCTTTCTCACTGAGGTTCATTCACTGGAATTTAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR TCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGATCACTCTGGATTTTaGAGACTTTTGCTTCTAACA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRDHSGF*RLLLLT
Trigger: TGTTAGAAGCAAAAGTCTTCAAAATCCAGAGTGATC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAAAAGGCCAGTACTTTaGACCAATAACACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSKRPVL*TNNTEE
Trigger: TTCTTCTGTGTTATTGGTTCAAAGTACTGGCCTTTT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR TCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTAAGTATATGGGTCTaGAAGGGCCATTATAAATGT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVSIWV*KGHYKC
Trigger: ACATTTATAATGGCCCTTTCAGACCCATATACTTAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAGAGTGGGCATTGACTaGAGATTTCTCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSRVGID*RFLSYK
Trigger: TTTATAAGAGAGAAATCTGCAGTCAATGCCCACTCT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTCCACTTTGAGCTATTaGTCGTTGAAAAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSTLSY*SLKKSF
Trigger: AAAGGACTTTTTCAACGAGCAATAGCTCAAAGTGGA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACTCTCAAAACATCTTTaGCTTCAGGATATCCATATA +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVLSKHL*LQDIHI
Trigger: TATATGGATATCCTGAAGGCAAAGATGTTTTGAGAG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTATGTCATTACAACTaGACTCAGCATCACATCATT +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVCHYN*TQHHII
Trigger: AATGATGTGATGCTGAGTGCAGTTGTAATGACATAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTATGTCATTACAACTaGACTCAGCATCACATCATT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVCHYN*TQHHII
Trigger: AATGATGTGATGCTGAGTGCAGTTGTAATGACATAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTACAAGATGTACAAAGTTaGTTCCATCAAGTAGTATAC +
Preference number: 4 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVQDVQS*FHQVVY
Trigger: GTATACTACTTGATGGAACCAACTTTGTACATCTTG...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCATTCTAGCATATTTTaGAGGTTGAAAACTAACAGC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSHSSIF*RLKTNS
Trigger: GCTGTTAGTTTTCAACCTGCAAAATATGCTAGAATG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCATTCTAGCATATTTTaGAGGTTGAAAACTAACAGC +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRHSSIF*RLKTNS
Trigger: GCTGTTAGTTTTCAACCTGCAAAATATGCTAGAATG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCTCTCAAAACATCTTTaGCTTCAGGATATCCATATA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLSKHL*LQDIHI
Trigger: TATATGGATATCCTGAAGGCAAAGATGTTTTGAGAG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTATTTATCAGGATGTaGTCTTTAAGTCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVFIRM*SLSPSH
Trigger: ATGAGATGGACTTAAAGAGCACATCCTGATAAATAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR GCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCCAAATACAGCAACGTaGCAGAATAAAATCAAATCA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTPNTAT*QNKIKS
Trigger: TGATTTGATTTTATTCTGGCACGTTGCTGTATTTGG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CCA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTATGAAGAGTTTCCTGTaGTCTGAGAATATTCGTTTA +
Preference number: 4 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTMKSFL*SENIRL
Trigger: TAAACGAATATTCTCAGACCACAGGAAACTCTTCAT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCAAGATGTACAAAGTTaGTTCCATCAAGTAGTATAC +
Preference number: 4 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSQDVQS*FHQVVY
Trigger: GTATACTACTTGATGGAACCAACTTTGTACATCTTG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CCA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGATGTTCTGTATAATGTaGGGCATCCTTTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRMFCIM*GILFHS
Trigger: TGAATGAAAAAGGATGCCCCACATTATACAGAACAT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS GCA 90 bp ACGGGCTCTCCCGGCCTCTCATCACCCACTCCGACTCGCCTTTCCTaGCGTGTCTCCCCACGCCAGCTCCGCGCGCTCGGCGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: TGSPGLSSPTPTRLS*RVSPRQLRALGAGR
Trigger: GCGGCCAGCGCCGAGCGCGCGGAGCTGGCGTGGGGAGACACGGCAGGAAAGGCGAGTCGGAGTGGGTGATGAGAGGCCGGGAGAGCCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413821.1
ENST00000482120.1
CDS TCA 90 bp CTAAGGCTTTGGAGGCGACTGCACTCCGCCCGGGCTCTGGCAGCGTaGGCGCCGCACAGTCGCTCGCTCCCTTCTCTCCGGTCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: LRLWRRLHSARALAA*APHSRSLPSLRSLR
Trigger: CCGGAGAGACCGGAGAGAAGGGAGCGAGCGACTGTGCGGCGCTCACGCTGCCAGAGCCCGGGCGGAGTGCAGTCGCCTCCAAAGCCTTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413821.1
ENST00000482120.1
CDS GCA 90 bp CTCTTGGTCTCTGTGGTCCCAGGGCACAGCTCTAGGGTGAAGAGCTaGAGTGACTGGGGCGCCGCTCTAAGGCTTTGGAGGCGACTGCAC +
Preference number: 5 (lower is better)
Translates to: LLVSVVPGHSSRVKS*SDWGAALRLWRRLH
Trigger: GTGCAGTCGCCTCCAAAGCCTTAGAGCGGCGCCCCAGTCACTGCAGCTCTTCACCCTAGAGCTGTGCCCTGGGACCACAGAGACCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413821.1
ENST00000482120.1
CDS GCA 90 bp AGTCAATGGGGCACCCAATCCCCGGTGTACCAAGCATGCCATCACTaGTCTCCAAACATAATTTGGCCACGTGCATCTGGGCAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: SQWGTQSPVYQACHH*SPNIIWPRASGQCH
Trigger: ATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGGGGATTGGGTGCCCCATTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS GCA 90 bp CATACAGAGAGTCAATGGGGCACCCAATCCCCGGTGTACCAAGCATaGCATCACTGCTCTCCAAACATAATTTGGCCACGTGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: HTESQWGTQSPVYQA*HHCSPNIIWPRASG
Trigger: CCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGGGGATTGGGTGCCCCATTGACTCTCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS CCA 90 bp TCCCCGGTGTACCAAGCATGCCATCACTGCTCTCCAAACATAATTTaGCCACGTGCATCTGGGCAGTGCCATGGTCCCACATTAGTTGTC +
Preference number: 5 (lower is better)
Translates to: SPVYQACHHCSPNII*PRASGQCHGPTLVV
Trigger: GACAACTAATGTGGGACCATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS TCA 90 bp AATCCACAGAGGGAGCCCCCTCATCTTTCCCCGGTCCCTTTGCAATaGTTCAAGGAGACGGTCTCTACAACACTTCGCCGTCAAATTCAA +
Preference number: 5 (lower is better)
Translates to: NPQREPPHLSPVPLQ*FKETVSTTLRRQIQ
Trigger: TTGAATTTGACGGCGAAGTGTTGTAGAGACCGTCTCCTTGAATCATTGCAAAGGGACCGGGGAAAGATGAGGGGGCTCCCTCTGTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000415045.1
CDS CCA 90 bp CACAGATGCTTCTGTAAACGGGAGGGGACAGCGAAGAGCAAAACTTaGCAAGCCAAATGTATCCAGAGATTTCGTACCAGGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: HRCFCKREGTAKSKT*QAKCIQRFRTRSHL
Trigger: CAGGTGGCTCCTGGTACGAAATCTCTGGATACATTTGGCTTGCCAAGTTTTGCTCTTCGCTGTCCCCTCCCGTTTACAGAAGCATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS GCA 90 bp GTACCAAGCATGCCATCACTGCTCTCCAAACATAATTTGGCCACGTaGATCTGGGCAGTGCCATGGTCCCACATTAGTTGTCTAGTTGTC +
Preference number: 5 (lower is better)
Translates to: VPSMPSLLSKHNLAT*IWAVPWSHISCLVV
Trigger: GACAACTAGACAACTAATGTGGGACCATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS CCA 90 bp AATCTGGGGGACAGGCGGTCCGAAGAACCACCTCATGTGGATGAATaGACTCACATTCATGATCCAAATCAGTGTGCTTCATTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: NLGDRRSEEPPHVDE*THIHDPNQCASFGG
Trigger: CCCTCCAAATGAAGCACACTGATTTGGATCATGAATGTGAGTCCATTCATCCACATGAGGTGGTTCTTCGGACCGCCTGTCCCCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS CCA 90 bp AGCATGCCATCACTGCTCTCCAAACATAATTTGGCCACGTGCATCTaGGCAGTGCCATGGTCCCACATTAGTTGTCTAGTTGTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: SMPSLLSKHNLATCI*AVPWSHISCLVVWL
Trigger: TAACCAGACAACTAGACAACTAATGTGGGACCATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTACACCATCACTGGTTaGGGACCCCCACTGTCCCGA +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKYTITG*GPPLSR
Trigger: TCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGTA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS TCA 90 bp AGTGGGTCCACATCATCCAATTTTTGTGATAGCACATGGCCAGCCTaGAGCAAACATCCCAACATACAGAGAGTCAATGGGGCACCCAAT +
Preference number: 5 (lower is better)
Translates to: SGSTSSNFCDSTWPA*SKHPNIQRVNGAPN
Trigger: ATTGGGTGCCCCATTGACTCTCTGTATGTTGGGATGTTTGCTTCAGGCTGGCCATGTGCTATCACAAAAATTGGATGATGTGGACCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS TCA 90 bp GGCAATCTGCCATCAATGATATTCTGGGGACACACAGGAGCAAATTaGGTGGCATTTCTGATATCTGACCAGGGAGATGGTGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GNLPSMIFWGHTGAN*VAFLISDQGDGGSG
Trigger: TCCAGAACCACCATCTCCCTGGTCAGATATCAGAAATGCCACTCAATTTGCTCCTGTGTGTCCCCAGAATATCATTGATGGCAGATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS TCA 90 bp TTAGCTGCAGGTCTATATCCTTTCTCTCTAAGCCCCGTTTGCACCTaGTCTGCAACCATAAATACTTCGTGGTGCTTAGTGTGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LAAGLYPFSLSPVCT*SATINTSWCLVCSQ
Trigger: TTGGCTGCACACTAAGCACCACGAAGTATTTATGGTTGCAGATCAGGTGCAAACGGGGCTTAGAGAGAAAGGATATAGACCTGCAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS GCA 90 bp TGCAGGTCTATATCCTTTCTCTCTAAGCCCCGTTTGCACCTGATCTaGAACCATAAATACTTCGTGGTGCTTAGTGTGCAGCCAAACGAT +
Preference number: 5 (lower is better)
Translates to: CRSISFLSKPRLHLI*NHKYFVVLSVQPND
Trigger: ATCGTTTGGCTGCACACTAAGCACCACGAAGTATTTATGGTTGCAGATCAGGTGCAAACGGGGCTTAGAGAGAAAGGATATAGACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGCTATACCCTGGTTGTaGAATGTGAATGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKAIPWL*NVNGGG
Trigger: CCCACCCCCATTCACATTCAACAACCAGGGTATAGC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTTGGGATCATCCTGCTaGGCAGTGGGAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYLGSSC*AVGKAD
Trigger: GTCAGCCTTTCCCACTGCCAAGCAGGATGATCCCAA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGCTGGCTATACCCTGGTaGTTGAATGTGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKLAIPW*LNVNGG
Trigger: ACCCCCATTCACATTCAACAACCAGGGTATAGCCAG...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS CCA 90 bp CTTCCATCATATAAATTTCCAGTACCTTCCATATATGAGCCACCATaGATATACACCATCACTGGTTTGGGACCCCCACTGTCCCGAATA +
Preference number: 5 (lower is better)
Translates to: LPSYKFPVPSIYEPP*IYTITGLGPPLSRI
Trigger: TATTCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGTATATCCATGGTGGCTCATATATGGAAGGTACTGGAAATTTATATGATGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTACACCATCACTGGTTaGGGACCCCCACTGTCCCGA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSYTITG*GPPLSR
Trigger: TCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGTA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGGATGGGGCAGAGTATaGTTCTGTCCTCCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKGWGRV*FCPPVN
Trigger: ATTTACTGGAGGACAGAACAATACTCTGCCCCATCC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGATAAAGTCAGCAGGTaGACACATGAACCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNDKVSR*THEPPA
Trigger: TGCTGGGGGTTCATGTGTCAACCTGCTGACTTTATC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTTGGGATCATCCTGCTaGGCAGTGGGAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLGSSC*AVGKAD
Trigger: GTCAGCCTTTCCCACTGCCAAGCAGGATGATCCCAA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGGACTTGGTTGTTGTTaGGGATCATCCTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNGLGCC*GSSCLA
Trigger: TGCCAAGCAGGATGATCCCAAACAACAACCAAGTCC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAGCTATACCCTGGTTGTaGAATGTGAATGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SALSCQQDVYKSDIFNALAIPWL*NVNGGG
Trigger: CCCACCCCCATTCACATTCAACAACCAGGGTATAGC...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATCTGGCTATACCCTGGTaGTTGAATGTGAATGGGGGT +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNLAIPW*LNVNGG
Trigger: ACCCCCATTCACATTCAACAACCAGGGTATAGCCAG...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGCCACTGGTGTGTCCCTaGTGCATATTCATAGTTGTT +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKPLVCP*CIFIVV
Trigger: AACAACTATGAATATGCACAAGGGACACACCAGTGG...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGGTTGCAAGTAACTCTTaGGACACACTTCACCTTACC +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKVASNS*DTLHLT
Trigger: GGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAAC...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTGGCAAGAGTGGGCATaGACTGCAGATTTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNWQEWA*TADFSL
Trigger: AAGAGAGAAATCTGCAGTCAATGCCCACTCTTGCCA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTCACATTGCCATAACTaGCCAAGACACTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKSHCHN*PRHFHH
Trigger: ATGATGGAAGTGTCTTGGCAAGTTATGGCAATGTGA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGGATGGGGCAGAGTATaGTTCTGTCCTCCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYGWGRV*FCPPVN
Trigger: ATTTACTGGAGGACAGAACAATACTCTGCCCCATCC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS TCA 90 bp AATATACCTCCGATTTCTTACAGGGGAGCTTGTCGAGAAAAGCTCTaGAAGATCTTCAGACAGCAGATATCTCCCATTGATTTCACATGT +
Preference number: 5 (lower is better)
Translates to: NIPPISYRGACREKL*KIFRQQISPIDFTC
Trigger: ACATGTGAAATCAATGGGAGATATCTGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGACAAGCTCCCCTGTAAGAAATCGGAGGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS TCA 90 bp GTATTGTTCTGTCCTCCAGTAAATGTATTGAATGTGTGTAAGGGCTaGATCCCTGGTATAGTGTTGGGAATCATTGTAATGGTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: VLFCPPVNVLNVCKG*IPGIVLGIIVMVLG
Trigger: ACCCAACACCATTACAATGATTCCCAACACTATACCAGGGATTCAGCCCTTACACACATTCAATACATTTACTGGAGGACAGAACAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS GCA 90 bp CATTCTGTTTTCCATATTAGCAGTGTGGCAAGAGTGGGCATTGACTaGAGATTTCTCTCTTATAAATCAAATCCAGTTAGCTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: HSVFHISSVARVGID*RFLSYKSNPVSCRS
Trigger: AGACCTGCAGCTAACTGGATTTGATTTATAAGAGAGAAATCTGCAGTCAATGCCCACTCTTGCCACACTGCTAATATGGAAAACAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATTTTCTAGACGCTTTTTaGAAATCTCGAGCACCCGGT +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYFLDAF*KSRAPG
Trigger: ACCGGGTGCTCGAGATTTCAAAAAAGCGTCTAGAAA...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATGGCAAGAGTGGGCATaGACTGCAGATTTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVWQEWA*TADFSL
Trigger: AAGAGAGAAATCTGCAGTCAATGCCCACTCTTGCCA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTTCTTACAGGGGAGCTaGTCGAGAAAAGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNFLQGS*SRKALK
Trigger: TTTCAGAGCTTTTCTCGACAAGCTCCCCTGTAAGAA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCTCTCCAAACATAATTaGGCCACGTGCATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLSKHN*ATCIWA
Trigger: TGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCTCTCCAAACATAATTaGGCCACGTGCATCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSLSKHN*ATCIWA
Trigger: TGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCTTATCTTTCCAAAGTaGGTAGCCACCAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRLIFPK*VATSGS
Trigger: GGACCCACTGGTGGCTACCAACTTTGGAAAGATAAG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCTTATCTTTCCAAAGTaGGTAGCCACCAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSLIFPK*VATSGS
Trigger: GGACCCACTGGTGGCTACCAACTTTGGAAAGATAAG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGATAAAGTCAGCAGGTaGACACATGAACCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTDKVSR*THEPPA
Trigger: TGCTGGGGGTTCATGTGTCAACCTGCTGACTTTATC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGTCCTTTGGTTGAATaGCTCCAACGGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYSPLVE*LQRLPS
Trigger: TGAAGGTAACCGTTGGAGCAATTCAACCAAAGGACT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGTGGTATCGAGCTGGTaGAATATCTTGGTCAACAAG +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNVVSSW*NILVNK
Trigger: CTTGTTGACCAAGATATTCAACCAGCTCGATACCAC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTGGAACCTGATCTGTTaGGCAATGATGGTAAAAGGC +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNWNLIC*AMMVKG
Trigger: GCCTTTTACCATCATTGCCAAACAGATCAGGTTCCA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAGTCTTGAGGGACTGGTaGATTTGGGTCACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVVLRDW*IWVTSF
Trigger: AAAACTGGTGACCCAAATCAACCAGTCCCTCAAGAC...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGGACTTGGTTGTTGTTaGGGATCATCCTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSGLGCC*GSSCLA
Trigger: TGCCAAGCAGGATGATCCCAAACAACAACCAAGTCC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGATAGTTCTTTCCTGTTaGGTGTTCCACATGCCTAAT +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKIVLSC*VFHMPN
Trigger: ATTAGGCATGTGGAACACCAAACAGGAAAGAACTAT...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATGGTTCTGTATCTACGTaGTACTCTACTGAGATTGCG +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNGSVST*YSTEIA
Trigger: CGCAATCTCAGTAGAGTACAACGTAGATACAGAACC...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGGTTCTGTATCTACGTaGTACTCTACTGAGATTGCG +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYGSVST*YSTEIA
Trigger: CGCAATCTCAGTAGAGTACAACGTAGATACAGAACC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATACTGGCAGTTCACAGTaGAAAAGCATAACCACCTCA +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYTGSSQ*KSITTS
Trigger: TGAGGTGGTTATGCTTTTCAACTGTGAACTGCCAGT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp ATAATCAGAGTGGTAATACGGGGGCATCCTCATATCATGAAAGACTGTTGCAAGTTGATTTCACATGTATaGGAGCAGCATCTTCAATCA +
Preference number: 5 (lower is better)
Translates to: IIRVVIRGHPHIMKDCCKLISHV*EQHLQS
Trigger: TGATTGAAGATGCTGCTCCAATACATGTGAAATCAA...CTTGCAACAGTCTTTCATGATATGAGGATGCCCCCGTATTACCACTCTGATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTAAGTCCTTTGGTTGAATaGCTCCAACGGTTACCTTCA +
Preference number: 5 (lower is better)
Translates to: SALSCQQDVYKSDIFNALSPLVE*LQRLPS
Trigger: TGAAGGTAACCGTTGGAGCAATTCAACCAAAGGACT...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAAGGGCTGTTCCACTTaGAGCTATTGCTCGTTGAAA +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVKGCST*SYCSLK
Trigger: TTTCAACGAGCAATAGCTCAAAGTGGAACAGCCCTT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATACTGTATCTGAAACATaGCAACCAACTTTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNTVSET*QPTFVA
Trigger: GGCCACAAAAGTTGGTTGCAATGTTTCAGATACAGT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTCTTGAGGGACTGGTaGATTTGGGTCACCAGTTTT +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVLRDW*IWVTSF
Trigger: AAAACTGGTGACCCAAATCAACCAGTCCCTCAAGAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAATCAGTGTGCTTCATTaGGAGGGACATGATTTCCTC +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVISVLH*EGHDFL
Trigger: GAGGAAATCATGTCCCTCCAAATGAAGCACACTGAT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGGCCATTAACAGCATaGACGCTTTGTGTACTTATC +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYRPLTA*TLCVLI
Trigger: GATAAGTACACAAAGCGTCAATGCTGTTAATGGCCT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATCACAAATTTGGAACTaGAGTGGCCTCAAGCTTCAC +
Preference number: 5 (lower is better)
Translates to: SALSCQQDVYKSDIFNALSQIWN*SGLKLH
Trigger: GTGAAGCTTGAGGCCACTCAAGTTCCAAATTTGTGA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATGGATTTGTCACAAATTaGGAACTTGAGTGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYGFVTN*ELEWPQ
Trigger: TTGAGGCCACTCAAGTTCCAAATTTGTGACAAATCC...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCTCAGATTTTCTGCTTaGAGTTGCCAGCAAGACGTC +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSLRFSA*SCQQDV
Trigger: GACGTCTTGCTGGCAACTCAAAGCAGAAAATCTGAG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS GCA 90 bp ACGAAAACCAGGCCCTTGGGCACGCGTATATGTATTTATATATTATaGGGTCGGTATATAAACATATATACGTTTCCTGCATGTAAATCC +
Preference number: 5 (lower is better)
Translates to: TKTRPLGTRICIYIL*GRYINIYTFPACKS
Trigger: GGATTTACATGCAGGAAACGTATATATGTTTATATACCGACCGCATAATATATAAATACATATACGCGTGCCCAAGGGCCTGGTTTTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATAGCAGATATCTCCCATaGATTTCACATGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNSRYLP*ISHVLE
Trigger: CTCCAATACATGTGAAATCAATGGGAGATATCTGCT...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTTCTTACAGGGGAGCTaGTCGAGAAAAGCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSFLQGS*SRKALK
Trigger: TTTCAGAGCTTTTCTCGACAAGCTCCCCTGTAAGAA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATCACATTGCCATAACTaGCCAAGACACTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVSHCHN*PRHFHH
Trigger: ATGATGGAAGTGTCTTGGCAAGTTATGGCAATGTGA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTAAGGGCTGTTCCACTTaGAGCTATTGCTCGTTGAAA +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTKGCST*SYCSLK
Trigger: TTTCAACGAGCAATAGCTCAAAGTGGAACAGCCCTT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTGGAACCTGATCTGTTaGGCAATGATGGTAAAAGGC +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSWNLIC*AMMVKG
Trigger: GCCTTTTACCATCATTGCCAAACAGATCAGGTTCCA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAAATGGACTTGGTTGTaGTTTGGGATCATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVKWTWL*FGIILL
Trigger: AAGCAGGATGATCCCAAACAACAACCAAGTCCATTT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTACCACTGAAAATGGACTaGGTTGTTGTTTGGGATCAT +
Preference number: 5 (lower is better)
Translates to: SALSCQQDVYKSDIFNALPLKMD*VVVWDH
Trigger: ATGATCCCAAACAACAACCAAGTCCATTTTCAGTGG...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCATCAGTGTGCTTCATTaGGAGGGACATGATTTCCTC +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSISVLH*EGHDFL
Trigger: GAGGAAATCATGTCCCTCCAAATGAAGCACACTGAT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCCCACTGGTGTGTCCCTaGTGCATATTCATAGTTGTT +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSPLVCP*CIFIVV
Trigger: AACAACTATGAATATGCACAAGGGACACACCAGTGG...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTGTTGCAAGTAACTCTTaGGACACACTTCACCTTACC +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTVASNS*DTLHLT
Trigger: GGTAAGGTGAAGTGTGTCCAAAGAGTTACTTGCAAC...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS TCA 90 bp TCGAGAAAAGCTCTGAAAGATCTTCAGACAGCAGATATCTCCCATTaGTTTCACATGTATTGGAGCAGCATCTTCAATCATCACTATTTA +
Preference number: 5 (lower is better)
Translates to: SRKALKDLQTADISH*FHMYWSSIFNHHYL
Trigger: TAAATAGTGATGATTGAAGATGCTGCTCCAATACATGTGAAATCAATGGGAGATATCTGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTATTCCACTTTGAGCTATaGCTCGTTGAAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVFHFEL*LVEKVL
Trigger: AAGGACTTTTTCAACGAGCAATAGCTCAAAGTGGAA...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTACTGTATCTGAAACATaGCAACCAACTTTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTTVSET*QPTFVA
Trigger: GGCCACAAAAGTTGGTTGCAATGTTTCAGATACAGT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTAAATGGACTTGGTTGTaGTTTGGGATCATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTKWTWL*FGIILL
Trigger: AAGCAGGATGATCCCAAACAACAACCAAGTCCATTT...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCCACTGAAAATGGACTaGGTTGTTGTTTGGGATCAT +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRPLKMD*VVVWDH
Trigger: ATGATCCCAAACAACAACCAAGTCCATTTTCAGTGG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAATCATTGTAATGGTGTaGGGTGTCATTAAGGGAACA +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVIIVMV*GVIKGT
Trigger: TGTTCCCTTAATGACACCCAACACCATTACAATGAT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAGTAAGTCTTGTAGGTaGAAAGCCAAGGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVSKSCR*KAKESS
Trigger: TGAAGATTCCTTGGCTTTCAACCTACAAGACTTACT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAATAGTTCTTTCCTGTTaGGTGTTCCACATGCCTAAT +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVIVLSC*VFHMPN
Trigger: ATTAGGCATGTGGAACACCAAACAGGAAAGAACTAT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAGGCCATTAACAGCATaGACGCTTTGTGTACTTATC +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSRPLTA*TLCVLI
Trigger: GATAAGTACACAAAGCGTCAATGCTGTTAATGGCCT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp TCTGCTTTGAGTTGCCAGCAAGACGTCTACAAATCTGACATTTTTAATGCTTTATTTAGGTTCTGCCAATaGATGGAGGAAGCTTCTATT +
Preference number: 5 (lower is better)
Translates to: SALSCQQDVYKSDIFNALFRFCQ*MEEASI
Trigger: AATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAA...TAAAGCATTAAAAATGTCAGATTTGTAGACGTCTTGCTGGCAACTCAAAGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp AATCAAAGAACTCAGAACTATAATCAGAGTGGTAATACGGGGGCATCCTCATATAGATCACTCTGGATTTaGAAGACTTTTGCTTCTAAC +
Preference number: 5 (lower is better)
Translates to: NQRTQNYNQSGNTGASSYRSLWI*KTFASN
Trigger: GTTAGAAGCAAAAGTCTTCAAAATCCAGAGTGATCT...ATATGAGGATGCCCCCGTATTACCACTCTGATTATAGTTCTGAGTTCTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCATTTTCTGCTTTGAGTaGCCAGCAAGACGTCTACAA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSIFCFE*PARRLQ
Trigger: TTGTAGACGTCTTGCTGGCAACTCAAAGCAGAAAAT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTCCTTATCAAATGGAATaGATTTCTGGCCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTPYQME*ISGLHP
Trigger: TGGATGCAGGCCAGAAATCAATTCCATTTGATAAGG...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp ATCAGCAGCACAGCCACCAAGCATATAAATTATCATGCACATCGTGCTAAAAATTTATCTGCTGAGTTTTaGTTACGGTACCTTTACCAA +
Preference number: 5 (lower is better)
Translates to: ISSTATKHINYHAHRAKNLSAEF*LRYLYQ
Trigger: TTGGTAAAGGTACCGTAACAAAAACTCAGCAGATAA...ATTTTTAGCACGATGTGCATGATAATTTATATGCTTGGTGGCTGTGCTGCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGAGCAGATATCTCCCATaGATTTCACATGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSRYLP*ISHVLE
Trigger: CTCCAATACATGTGAAATCAATGGGAGATATCTGCT...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTTCCACTTTGAGCTATaGCTCGTTGAAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSFHFEL*LVEKVL
Trigger: AAGGACTTTTTCAACGAGCAATAGCTCAAAGTGGAA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAGTAAGTCTTGTAGGTaGAAAGCCAAGGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSSKSCR*KAKESS
Trigger: TGAAGATTCCTTGGCTTTCAACCTACAAGACTTACT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CAAGTAACTCTTTGGACACACTTCACCTTACCAAAAGGAACAAAATACAGAGTAAACAGCATTGACGCTTaGTGTACTTATCCAAATATG +
Preference number: 5 (lower is better)
Translates to: QVTLWTHFTLPKGTKYRVNSIDA*CTYPNM
Trigger: CATATTTGGATAAGTACACAAAGCGTCAATGCTGTT...TACTCTGTATTTTGTTCCTTTTGGTAAGGTGAAGTGTGTCCAAAGAGTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTTTAGGTTCTGCCAATaGATGGAGGAAGCTTCTATT +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRFRFCQ*MEEASI
Trigger: AATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGGTTACTGCAGTTAGTTaGTCAGAGAAAGTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRVTAVS*SEKVLC
Trigger: GCAAAGAACTTTCTCTGACAAACTAACTGCAGTAAC...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCGTTACTGCAGTTAGTTaGTCAGAGAAAGTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSVTAVS*SEKVLC
Trigger: GCAAAGAACTTTCTCTGACAAACTAACTGCAGTAAC...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTTGATTTCACATGTATaGGAGCAGCATCTTCAATCA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSLISHV*EQHLQS
Trigger: TGATTGAAGATGCTGCTCCAATACATGTGAAATCAA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAGCTGGTTGAATATCTaGGTCAACAAGTTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSSWLNI*VNKFFV
Trigger: TACAAAGAACTTGTTGACCAAGATATTCAACCAGCT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGTCTCTCAAAACATCTTaGCCTTCAGGATATCCATAT +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRSLKTS*PSGYPY
Trigger: ATATGGATATCCTGAAGGCAAAGATGTTTTGAGAGA...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCAACAGCATTGACGCTTaGTGTACTTATCCAAATATG +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSNSIDA*CTYPNM
Trigger: CATATTTGGATAAGTACACAAAGCGTCAATGCTGTT...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AAAATCTTCTTTAGGTTCTGCCAATTGATGGAGGAAGCTTCTATTAAAAACTCCTATCATGAAAGACTGTaGCAAGTAACTCTTTGGACA +
Preference number: 5 (lower is better)
Translates to: KIFFRFCQLMEEASIKNSYHERL*QVTLWT
Trigger: TGTCCAAAGAGTTACTTGCAACAGTCTTTCATGATA...GGAGTTTTTAATAGAAGCTTCCTCCATCAATTGGCAGAACCTAAAGAAGATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp AGCACTTATGTGATAATGGTGTACCTGCCAGTCTTTAAACTTCTTTGTTTTACTTATCATGAAAGACTGTaGCAAGTAACTCTTTGGACA +
Preference number: 5 (lower is better)
Translates to: STYVIMVYLPVFKLLCFTYHERL*QVTLWT
Trigger: TGTCCAAAGAGTTACTTGCAACAGTCTTTCATGATA...AGTAAAACAAAGAAGTTTAAAGACTGGCAGGTACACCATTATCACATAAGTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS-3UTR CAA 90 bp CATATACAAACATTTGGAAAGGTCTGTGATATACTGTTACTGGTAAACAACAGGCCAAGATGTACAAAGTaGGTTCCATCAAGTAGTATA +
Preference number: 5 (lower is better)
Translates to: HIQTFGKVCDILLLVNNRPRCTK*VPSSSI
Trigger: TATACTACTTGATGGAACCAACTTTGTACATCTTGG...CCTGTTGTTTACCAGTAACAGTATATCACAGACCTTTCCAAATGTTTGTATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS GCA 72 bp CCCGGCCTCTCATCACCCACTCCGACTCGCCTTTCCTaGCGTGTCTCCCCACGCCAGCTCCGCGCGCTCGGC +
Preference number: 6 (lower is better)
Translates to: PGLSSPTPTRLS*RVSPRQLRALG
Trigger: GCCGAGCGCGCGGAGCTGGCGTGGGGAGACACGGCAGGAAAGGCGAGTCGGAGTGGGTGATGAGAGGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413821.1
ENST00000482120.1
CDS CCA 72 bp AAGAGCTGCAGTGACTGGGGCGCCGCTCTAAGGCTTTaGAGGCGACTGCACTCCGCCCGGGCTCTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: KSCSDWGAALRL*RRLHSARALAA
Trigger: CGCTGCCAGAGCCCGGGCGGAGTGCAGTCGCCTCCAAAGCCTTAGAGCGGCGCCCCAGTCACTGCAGCTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413821.1
ENST00000482120.1
CDS CAA 72 bp GGCCTTCCAACACCCTCTCAGCCGATTTCCATGCTCTaGGTCTCTGTGGTCCCAGGGCACAGCTCTAGGGTG +
Preference number: 6 (lower is better)
Translates to: GLPTPSQPISML*VSVVPGHSSRV
Trigger: CACCCTAGAGCTGTGCCCTGGGACCACAGAGACCAAGAGCATGGAAATCGGCTGAGAGGGTGTTGGAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482120.1
CDS CAA 90 bp GGGTCATCAGGCCTTCCAACACCCTCTCAGCCGATTTCCATGCTCTaGGTCTCTGTGGTCCCAGGGCACAGCTCTAGGGTGAAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: GSSGLPTPSQPISML*VSVVPGHSSRVKSC
Trigger: GCAGCTCTTCACCCTAGAGCTGTGCCCTGGGACCACAGAGACCAAGAGCATGGAAATCGGCTGAGAGGGTGTTGGAAGGCCTGATGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482120.1
CDS GCA 72 bp CATCAGGCCTTCCAACACCCTCTCAGCCGATTTCCATaGTCTTGGTCTCTGTGGTCCCAGGGCACAGCTCTA +
Preference number: 6 (lower is better)
Translates to: HQAFQHPLSRFP*SWSLWSQGTAL
Trigger: TAGAGCTGTGCCCTGGGACCACAGAGACCAAGAGCATGGAAATCGGCTGAGAGGGTGTTGGAAGGCCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482120.1
CDS TCA 72 bp AGGGAGCCCCCTCATCTTTCCCCGGTCCCTTTGCAATaGTTCAAGGAGACGGTCTCTACAACACTTCGCCGT +
Preference number: 6 (lower is better)
Translates to: REPPHLSPVPLQ*FKETVSTTLRR
Trigger: ACGGCGAAGTGTTGTAGAGACCGTCTCCTTGAATCATTGCAAAGGGACCGGGGAAAGATGAGGGGGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000415045.1
CDS GCA 72 bp GGCACCCAATCCCCGGTGTACCAAGCATGCCATCACTaGTCTCCAAACATAATTTGGCCACGTGCATCTGGG +
Preference number: 6 (lower is better)
Translates to: GTQSPVYQACHH*SPNIIWPRASG
Trigger: CCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGGGGATTGGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS CAA 72 bp TGCAGGTCTATATCCTCTCAGCCGATTTCCATGCTCTaGGTCTCTGTGGTCCCAGGGCACAGCTCTAGGGTG +
Preference number: 6 (lower is better)
Translates to: CRSISSQPISML*VSVVPGHSSRV
Trigger: CACCCTAGAGCTGTGCCCTGGGACCACAGAGACCAAGAGCATGGAAATCGGCTGAGAGGATATAGACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413821.1
CDS GCA 72 bp CACAGAGGGAGCCCCCTCATCTTTCCCCGGTCCCTTTaGAATGATTCAAGGAGACGGTCTCTACAACACTTC +
Preference number: 6 (lower is better)
Translates to: HRGSPLIFPRSL*NDSRRRSLQHF
Trigger: GAAGTGTTGTAGAGACCGTCTCCTTGAATCATTGCAAAGGGACCGGGGAAAGATGAGGGGGCTCCCTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000415045.1
CDS CCA 72 bp TCTTGTTATCCATCGGCTCCAAAACATTCCGTTTCGTaGGGAGGAGAGACGAAAACCAGGCCCTTGGGCACG +
Preference number: 6 (lower is better)
Translates to: SCYPSAPKHSVS*GGETKTRPLGT
Trigger: CGTGCCCAAGGGCCTGGTTTTCGTCTCTCCTCCCCACGAAACGGAATGTTTTGGAGCCGATGGATAACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS GCA 72 bp AGTCAATGGGGCACCCAATCCCCGGTGTACCAAGCATaGCATCACTGCTCTCCAAACATAATTTGGCCACGT +
Preference number: 6 (lower is better)
Translates to: SQWGTQSPVYQA*HHCSPNIIWPR
Trigger: ACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGGGGATTGGGTGCCCCATTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS GCA 72 bp TTAGCTGCAGGTCTATATCCTCTCAGCCGATTTCCATaGTCTTGGTCTCTGTGGTCCCAGGGCACAGCTCTA +
Preference number: 6 (lower is better)
Translates to: LAAGLYPLSRFP*SWSLWSQGTAL
Trigger: TAGAGCTGTGCCCTGGGACCACAGAGACCAAGAGCATGGAAATCGGCTGAGAGGATATAGACCTGCAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413821.1
CDS CCA 72 bp AGCCTGAAGCAAACATCCCAACATACAGAGAGTCAATaGGGCACCCAATCCCCGGTGTACCAAGCATGCCAT +
Preference number: 6 (lower is better)
Translates to: SLKQTSQHTESQ*GTQSPVYQACH
Trigger: ATGGCATGCTTGGTACACCGGGGATTGGGTGCCCCATTGACTCTCTGTATGTTGGGATGTTTGCTTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS CAA 90 bp ATCCCCGGTGTACCAAGCATGCCATCACTGCTCTCCAAACATAATTaGGCCACGTGCATCTGGGCAGTGCCATGGTCCCACATTAGTTGT +
Preference number: 6 (lower is better)
Translates to: IPGVPSMPSLLSKHN*ATCIWAVPWSHISC
Trigger: ACAACTAATGTGGGACCATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCATGCTTGGTACACCGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS TCA 72 bp CAGGGCTGCAAAGGCCAAGATGTTCAGAAACAGCAGTaGTGCTCCAACTGCAATAGTGACACTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: QGCKGQDVQKQQ*CSNCNSDTQLC
Trigger: ACAGAGCTGAGTGTCACTATTGCAGTTGGAGCATCACTGCTGTTTCTGAACATCTTGGCCTTTGCAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS GCA 72 bp ATGCCATCACTGCTCTCCAAACATAATTTGGCCACGTaGATCTGGGCAGTGCCATGGTCCCACATTAGTTGT +
Preference number: 6 (lower is better)
Translates to: MPSLLSKHNLAT*IWAVPWSHISC
Trigger: ACAACTAATGTGGGACCATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTTGGAGAGCAGTGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS CCA 72 bp TATATGAGCCACCATGGATATACACCATCACTGGTTTaGGACCCCCACTGTCCCGAATATCATCCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: YMSHHGYTPSLV*DPHCPEYHPQS
Trigger: CGACTGAGGATGATATTCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGTATATCCATGGTGGCTCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS CAA 90 bp CACTCAGCTCTGTTGAGTAGTCCCTTTGATCCACTGAAAATGGACTaGGTTGTTGTTTGGGATCATCCTGCTTGGCAGTGGGAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: HSALLSSPFDPLKMD*VVVWDHPAWQWERL
Trigger: CAGCCTTTCCCACTGCCAAGCAGGATGATCCCAAACAACAACCAAGTCCATTTTCAGTGGATCAAAGGGACTACTCAACAGAGCTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS TCA 72 bp AGTGAGCCCTGGGGGATTTGTCACAAATTTGGAACTTaGGTGGCCTCAAGCTTCACAGGTAAGGCATTGTGT +
Preference number: 6 (lower is better)
Translates to: SEPWGICHKFGT*VASSFTGKALC
Trigger: ACACAATGCCTTACCTGTGAAGCTTGAGGCCACTCAAGTTCCAAATTTGTGACAAATCCCCCAGGGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS GCA 72 bp AGCTTGTATGAGATCAAGGAGTCCATAGTTCCCCTTTaGAGCCTGATCGCCTGTACTCAAGAAACCGAGTAC +
Preference number: 6 (lower is better)
Translates to: SLYEIKESIVPL*SLIACTQETEY
Trigger: GTACTCGGTTTCTTGAGTACAGGCGATCAGGCTGCAAAGGGGAACTATGGACTCCTTGATCTCATACAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS GCA 72 bp ACTGAAAATGGACTTGGTTGTTGTTTGGGATCATCCTaGTTGGCAGTGGGAAAGGCTGACGTGACAGGTACA +
Preference number: 6 (lower is better)
Translates to: TENGLGCCLGSS*LAVGKADVTGT
Trigger: TGTACCTGTCACGTCAGCCTTTCCCACTGCCAAGCAGGATGATCCCAAACAACAACCAAGTCCATTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS CAA 72 bp ATATATGAGCCACCATGGATATACACCATCACTGGTTaGGGACCCCCACTGTCCCGAATATCATCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: IYEPPWIYTITG*GPPLSRISSSV
Trigger: GACTGAGGATGATATTCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGTATATCCATGGTGGCTCATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361589.8
ENST00000457714.5
CDS CAA 72 bp GAAAATGGACTTGGTTGTTGTTTGGGATCATCCTGCTaGGCAGTGGGAAAGGCTGACGTGACAGGTACAGAA +
Preference number: 6 (lower is better)
Translates to: ENGLGCCLGSSC*AVGKADVTGTE
Trigger: TTCTGTACCTGTCACGTCAGCCTTTCCCACTGCCAAGCAGGATGATCCCAAACAACAACCAAGTCCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS CAA 90 bp TCTATATCTGCCACTCCAGTGAGCCCTGGGGGATTTGTCACAAATTaGGAACTTGAGTGGCCTCAAGCTTCACAGGTAAGGCATTGTGTT +
Preference number: 6 (lower is better)
Translates to: SISATPVSPGGFVTN*ELEWPQASQVRHCV
Trigger: AACACAATGCCTTACCTGTGAAGCTTGAGGCCACTCAAGTTCCAAATTTGTGACAAATCCCCCAGGGCTCACTGGAGTGGCAGATATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS GCA 72 bp AGCTTGTATGAGATCAAGGAGTCCATAGTTCCCCTTTaGAGCCTGATCGCCTGTACTCAAGAAACCTCTAGT +
Preference number: 6 (lower is better)
Translates to: SLYEIKESIVPL*SLIACTQETSS
Trigger: ACTAGAGGTTTCTTGAGTACAGGCGATCAGGCTGCAAAGGGGAACTATGGACTCCTTGATCTCATACAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466350.1
ENST00000469564.5
CDS CCA 72 bp AAACATAATTTGGCCACGTGCATCTGGGCAGTGCCATaGTCCCACATTAGTTGTCTAGTTGTCTGGTTACAG +
Preference number: 6 (lower is better)
Translates to: KHNLATCIWAVP*SHISCLVVWLQ
Trigger: CTGTAACCAGACAACTAGACAACTAATGTGGGACCATGGCACTGCCCAGATGCACGTGGCCAAATTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS CAA 72 bp CTGTTGAGTAGTCCCTTTGATCCACTGAAAATGGACTaGGTTGTTGTTTGGGATCATCCTGCTTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LLSSPFDPLKMD*VVVWDHPAWQW
Trigger: CCACTGCCAAGCAGGATGATCCCAAACAACAACCAAGTCCATTTTCAGTGGATCAAAGGGACTACTCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS GCA 72 bp ATATCCTTTCTCTCTAAGCCCCGTTTGCACCTGATCTaGAACCATAAATACTTCGTGGTGCTTAGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: ISFLSKPRLHLI*NHKYFVVLSVQ
Trigger: CTGCACACTAAGCACCACGAAGTATTTATGGTTGCAGATCAGGTGCAAACGGGGCTTAGAGAGAAAGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS GCA 72 bp TGCAGATTTCTCTCTTATAAATCAAATCCAGTTAGCTaGAGGTCTATATCTGCCACTCCAGTGAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: CRFLSYKSNPVS*RSISATPVSPG
Trigger: CCCAGGGCTCACTGGAGTGGCAGATATAGACCTGCAGCTAACTGGATTTGATTTATAAGAGAGAAATCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457714.5
CDS GCA 72 bp AGCTTGTATGAGATCAAGGAGTCCATAGTTCCCCTTTaGAGCCTGATCGCCTGTACTCAAGAAACCTCATTT +
Preference number: 6 (lower is better)
Translates to: SLYEIKESIVPL*SLIACTQETSF
Trigger: AAATGAGGTTTCTTGAGTACAGGCGATCAGGCTGCAAAGGGGAACTATGGACTCCTTGATCTCATACAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469727.1
CDS CAA 72 bp ATATATGAGCCACCATGGATATACACCATCACTGGTTaGGGACCCCCACTGTCCCGAATATCTTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: IYEPPWIYTITG*GPPLSRISSSS
Trigger: TGAAGATGAAGATATTCGGGACAGTGGGGGTCCCAAACCAGTGATGGTGTATATCCATGGTGGCTCATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415045.1
CDS TCA 72 bp CCGATTTCTTACAGGGGAGCTTGTCGAGAAAAGCTCTaGAAGATCTTCAGACAGCAGATATCTCCCATTGAT +
Preference number: 6 (lower is better)
Translates to: PISYRGACREKL*KIFRQQISPID
Trigger: ATCAATGGGAGATATCTGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGACAAGCTCCCCTGTAAGAAATCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS TCA 72 bp ACATCATCCAATTTTTGTGATAGCACATGGCCAGCCTaGAGCAAACATCCCAACATACAGAGAGTCAATGGG +
Preference number: 6 (lower is better)
Translates to: TSSNFCDSTWPA*SKHPNIQRVNG
Trigger: CCCATTGACTCTCTGTATGTTGGGATGTTTGCTTCAGGCTGGCCATGTGCTATCACAAAAATTGGATGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000415045.1
ENST00000457714.5
CDS TCA 72 bp ACTTTTGTGGCCAACATTCTAGCATATTTTGCAGGTTaGAAACTAACAGCCCAGCTGGAAAGGGCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: TFVANILAYFAG*KLTAQLERAVP
Trigger: TGGAACAGCCCTTTCCAGCTGGGCTGTTAGTTTTCAACCTGCAAAATATGCTAGAATGTTGGCCACAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000415045.1
ENST00000457714.5
ENST00000466350.1
ENST00000469564.5
ENST00000469727.1
CDS GCA 72 bp AGCTTGTATGAGATCAAGGAGTCCATAGTTCCCCTTTaGAGCCTGATCGCCTGTACTCAAGAAACCTTTATT +
Preference number: 6 (lower is better)
Translates to: SLYEIKESIVPL*SLIACTQETFI
Trigger: AATAAAGGTTTCTTGAGTACAGGCGATCAGGCTGCAAAGGGGAACTATGGACTCCTTGATCTCATACAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490929.5
CDS CAA 72 bp ATCCCTGGTATAGTGTTGGGAATCATTGTAATGGTGTaGGGTGTCATTAAGGGAACATCATCAGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: IPGIVLGIIVMV*GVIKGTSSGDL
Trigger: GAGGTCACCTGATGATGTTCCCTTAATGACACCCAACACCATTACAATGATTCCCAACACTATACCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS TCA 72 bp CATGATCCAAATCAGTGTGCTTCATTTGGAGGGACATaGTTTCCTCTTCTTGTGCATGGGTTAGATCATTGG +
Preference number: 6 (lower is better)
Translates to: HDPNQCASFGGT*FPLLVHGLDHW
Trigger: CCAATGATCTAACCCATGCACAAGAAGAGGAAATCATGTCCCTCCAAATGAAGCACACTGATTTGGATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
CDS CAA 72 bp ATGGTAGAATATACCTCCGATTTCTTACAGGGGAGCTaGTCGAGAAAAGCTCTGAAAGATCTTCAGACAGCA +
Preference number: 6 (lower is better)
Translates to: MVEYTSDFLQGS*SRKALKDLQTA
Trigger: TGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGACAAGCTCCCCTGTAAGAAATCGGAGGTATATTCTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS CAA 90 bp GACTGTATAATGGTAGAATATACCTCCGATTTCTTACAGGGGAGCTaGTCGAGAAAAGCTCTGAAAGATCTTCAGACAGCAGATATCTCC +
Preference number: 6 (lower is better)
Translates to: DCIMVEYTSDFLQGS*SRKALKDLQTADIS
Trigger: GGAGATATCTGCTGTCTGAAGATCTTTCAGAGCTTTTCTCGACAAGCTCCCCTGTAAGAAATCGGAGGTATATTCTACCATTATACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS GCA 72 bp TGCAGATTTCTCTCTTATAAATCAAATCCAGTTAGCTaGAGGTCTATATCCTCTCAGCCGATTTCCATGCTC +
Preference number: 6 (lower is better)
Translates to: CRFLSYKSNPVS*RSISSQPISML
Trigger: GAGCATGGAAATCGGCTGAGAGGATATAGACCTGCAGCTAACTGGATTTGATTTATAAGAGAGAAATCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413821.1
CDS CAA 72 bp AATGGTCCAAGTATTTACCAGTTTCTAGACGCTTTTTaGAAATCTCGAGCACCCGGTAATTCTTGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: NGPSIYQFLDAF*KSRAPGNSCSR
Trigger: CCTGGAACAAGAATTACCGGGTGCTCGAGATTTCAAAAAAGCGTCTAGAAACTGGTAAATACTTGGACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361589.8
CDS CAA 72 bp AATCACAGGTCCAAAGGCTATGTGGTATCGAGCTGGTaGAATATCTTGGTCAACAAGTTCTTTGTAAGGCTT +
Preference number: 6 (lower is better)
Translates to: NHRSKGYVVSSW*NILVNKFFVRL
Trigger: AAGCCTTACAAAGAACTTGTTGACCAAGATATTCAACCAGCTCGATACCACATAGCCTTTGGACCTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
ENST00000466350.1
ENST00000469564.5
CDS CAA 90 bp GGCTTCTTCTGTAGGCATTCCACTAACTCTACTGTATCTGAAACATaGCAACCAACTTTTGTGGCCAACATTCTAGCATATTTTGCAGGT +
Preference number: 6 (lower is better)
Translates to: GFFCRHSTNSTVSET*QPTFVANILAYFAG
Trigger: ACCTGCAAAATATGCTAGAATGTTGGCCACAAAAGTTGGTTGCAATGTTTCAGATACAGTAGAGTTAGTGGAATGCCTACAGAAGAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5
ENST00000466350.1
ENST00000469564.5
ENST00000469727.1
CDS TCA 72 bp GCTCTGAAAGATCTTCAGACAGCAGATATCTCCCATTaGTTTCACATGTATTGGAGCAGCATCTTCAATCAT +
Preference number: 6 (lower is better)
Translates to: ALKDLQTADISH*FHMYWSSIFNH
Trigger: ATGATTGAAGATGCTGCTCCAATACATGTGAAATCAATGGGAGATATCTGCTGTCTGAAGATCTTTCAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS GCA 72 bp TGCAGATTTCTCTCTTATAAATCAAATCCAGTTAGCTaGAGGTCTATATCCTTTCTCTCTAAGCCCCGTTTG +
Preference number: 6 (lower is better)
Translates to: CRFLSYKSNPVS*RSISFLSKPRL
Trigger: CAAACGGGGCTTAGAGAGAAAGGATATAGACCTGCAGCTAACTGGATTTGATTTATAAGAGAGAAATCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS CAA 72 bp CTGTTTTCCATATTAGCAGTGTGGCAAGAGTGGGCATaGACTGCAGATTTCTCTCTTATAAATCAAATCCAG +
Preference number: 6 (lower is better)
Translates to: LFSILAVWQEWA*TADFSLINQIQ
Trigger: CTGGATTTGATTTATAAGAGAGAAATCTGCAGTCAATGCCCACTCTTGCCACACTGCTAATATGGAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361589.8
ENST00000413821.1
ENST00000415045.1
ENST00000423427.1
ENST00000457714.5
CDS CAA 72 bp TCTTTTCTTCCCCACAGTAACACCAGAATTATTCATTaGCATCTCTCTAGTAGAATCTCCTCTTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SFLPHSNTRIIH*HLSSRISSSAS
Trigger: GGAAGCTGAAGAGGAGATTCTACTAGAGAGATGCAAATGAATAATTCTGGTGTTACTGTGGGGAAGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490929.5
CDS GCA 72 bp AGGCCCTTGGGCACGCGTATATGTATTTATATATTATaGGGTCGGTATATAAACATATATACGTTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: RPLGTRICIYIL*GRYINIYTFPA
Trigger: TGCAGGAAACGTATATATGTTTATATACCGACCGCATAATATATAAATACATATACGCGTGCCCAAGGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423427.1
CDS CAA 72 bp TATGTCATTACAACTGCACTCAGCATCACATCATTTTaGGAGAAATTGCAAGGAAATAACTCTGTAGGGCCA +
Preference number: 6 (lower is better)
Translates to: YVITTALSITSF*EKLQGNNSVGP
Trigger: TGGCCCTACAGAGTTATTTCCTTGCAATTTCTCCAAAAATGATGTGATGCTGAGTGCAGTTGTAATGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361589.8
ENST00000401917.4
ENST00000457714.5