Pregenerated sensors for NKX2-6 (Homo sapiens)
Ensembl gene IDs: ENSG00000180053Ensembl transcript IDs: ENST00000325017.4
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTaGGTAGCAGCTTCCTTCCAGCGCCGCGTCCCCTCCTTGTCACGA | + |
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Preference number: 1 (lower is better) Translates to: GADRSFRDPSGKKRR*VAASFQRRVPSLSR Trigger: TCGTGACAAGGAGGGGACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR CCA 90 bp | GCCCTCCCGTCCTCTTCTCTTTCTTCCCCAACAGCTGTCATTAATTaGAGGATGGTAGGCCCGCTAGATCACCATCTCCATTCACCGCCG | + |
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Preference number: 1 (lower is better) Translates to: ALPSSSLSSPTAVIN*RMVGPLDHHLHSPP Trigger: CGGCGGTGAATGGAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGAAGAAAGAGAAGAGGACGGGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR CCA 90 bp | AGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGGGCGCGGCCTTATaGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACT | + |
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Preference number: 1 (lower is better) Translates to: RVLLWINGVPWGAAL*GCLSPKGRGSKQVT Trigger: AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGCGCCCCAGGGGACTCCGTTAATCCAGAGGAGCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR CAA 90 bp | TGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTaGGGTAGCAGCTTCCTTCCAGCGCCGCGTCCCCTCCTTGTCACG | + |
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Preference number: 2 (lower is better) Translates to: WCRSQFQRSLRKEAP*GSSFLPAPRPLLVT Trigger: CGTGACAAGGAGGGGACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGCTCCTTGTCACGACCTaGGGGCGGAGGGGAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ESSRGQKRVLLWINGVPWLLVTT*GRRGRE Trigger: TTCCCTTCCCCTCCGCCCGCAGGTCGTGACAAGGAG...CCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGGCATCTGGCCCTGGTTaGCAGAGTCAAGCCGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TVVQIAVSEIPPERSAVGASGPG*QSQAEE Trigger: CTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGC...CCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGACGAGCATCTGGCCCTaGTTGGCAGAGTCAAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: ESSRGQKRVLLWINGVPWTSIWP*LAESSR Trigger: TCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGT...CCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CCA 90 bp | GACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGAAGGGAACGAGCATCTaGCCCTGGTTGGCAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: DCGADRSFRDPSGKKRRWKGTSI*PWLAES Trigger: TGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTT...CCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGGTTACTCTTCGTGAACTTCCCGGATCCTCAAGTTCCCAGCTCTTCAGCCTTCAGTCCCTGTGTTaGTTGGTGGGTGACCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: KQVTLRELPGSSSSQLFSLQSLC*LVGDRW Trigger: CCACCGGTCACCCACCAAGCAACACAGGGACTGAAG...GCTGAAGAGCTGGGAACTTGAGGATCCGGGAAGTTCACGAAGAGTAACCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR GCA 90 bp | GCGGCCTTATGGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACTTCCCACACCCCAAACTaGCAGCCAGCCTTGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: AALWGCLSPKGRGSKQVTSHTPN*QPALVF Trigger: GAACACCAAGGCTGGCTGGCAGTTTGGGGTGTGGGA...AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGGTTACTCTTCGTGAACTTCCCGGATCCTCAAGTTCCCAGCTCTTCAGCGGAAAGAAGCGCCGTTaGGTAGCAGCTTCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KQVTLRELPGSSSSQLFSGKKRR*VAASFQ Trigger: CTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCC...GCTGAAGAGCTGGGAACTTGAGGATCCGGGAAGTTCACGAAGAGTAACCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR GCA 72 bp | GATCACCATCTCCATTCACCGCCGATGCCCCGGGGCTaGTGCGTACAGATGCAAGAGCCTCTCGGGCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: DHHLHSPPMPRG*CVQMQEPLGPL Trigger: CAGAGGCCCGAGAGGCTCTTGCATCTGTACGCAGCAGCCCCGGGGCATCGGCGGTGAATGGAGATGGTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCCGCCGCGTCCCCTCCTaGTCACGACCTGCGGGCGGA | + |
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Preference number: 3 (lower is better) Translates to: SPTAVINWRMVGPLDHHLRRVPS*SRPAGG Trigger: TCCGCCCGCAGGTCGTGACAAGGAGGGGACGCGGCG...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR TCA 72 bp | GGGGGAAGAACGTCCCAGGCGGGGCCTTTAACTGGGTaGCTGTGGTGCAGATCGCAGTTTCAGAGATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GGRTSQAGPLTG*LWCRSQFQRSL Trigger: GAGGGATCTCTGAAACTGCGATCTGCACCACAGTCACCCAGTTAAAGGCCCCGCCTGGGACGTTCTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR CCA 72 bp | CAGCCAGCCTTGGTGTTCTTCAGTCCCTGTGTTGCTTaGTGGGTGACCGGTGGAGGGGTCTTCTTTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: QPALVFFSPCVA*WVTGGGVFFWG Trigger: CCCCCAAAAGAAGACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAAGGCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CAA 90 bp | AAAGTCACGCGCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGTGGAGGGGTCTTCTTTaGGGGGAAGAACGTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KVTRLSTAPTPQTASQPWWRGLL*GEERPR Trigger: CCTGGGACGTTCTTCCCCCAAAAGAAGACCCCTCCA...CCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGCGCGTGACTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCCGGAAAGAAGCGCCGTaGGGTAGCAGCTTCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SPTAVINWRMVGPLDHHLRKEAP*GSSFLP Trigger: TGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCG...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGGGAACGAGCATCTGGCCCTGGTTGGCAGAGTCAAGCCGAGGAGCCATCCCGAAGGCGGATaGGGCGGGGCCGAGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GGEGNEHLALVGRVKPRSHPEGG*GGAEEV Trigger: GACCTCCTCGGCCCCGCCCCATCCGCCTTCGGGATG...GCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR TCA 90 bp | CCGGGGCTGCTGCGTACAGATGCAAGAGCCTCTCGGGCCTCTGGGGTTGAAGCCAGAAGGGGGTGGAGGTaGCGGGGCTCAGCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: PGLLRTDARASRASGVEARRGWR*RGSAAS Trigger: GGATGCTGCTGAGCCCCGTCACCTCCACCCCCTTCT...GGCTTCAACCCCAGAGGCCCGAGAGGCTCTTGCATCTGTACGCAGCAGCCCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | GGAGGGGAAGGGAACGAGCATCTGGCCCTGGTTGGCAGAGTCAAGCCGAGGAGCACCCTGCAGCGTGGCTaGCAGATGGCCCTGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GGEGNEHLALVGRVKPRSTLQRG*QMALRG Trigger: ACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGT...GCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | GGAGGGGAAGGGAACGAGCATCTGGCCCTGGTTGGCAGAGTCAAGCCGAGGAGCGCCTGCGCCGTAGGGTaGTCCGCTGTAGCCTCCGTA | + |
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Preference number: 4 (lower is better) Translates to: GGEGNEHLALVGRVKPRSACAVG*SAVASV Trigger: TACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGC...GCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AGATCCCTCCGGAAAGAAGCGCCGTTGGGTAGCAGCTTCCTTCCAGCGCCGCGTGCAGGTGCCGTAGCCTaGGCCGTAGGGTGCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RSLRKEAPLGSSFLPAPRAGAVA*AVGCSA Trigger: AGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGC...ACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGGGAACGAGCATCTGGCCCTGGTTGGCAGAGTCAAGCCGAGGAGCTGCGGGGTGGCATTCTaGCCACCGTGTCCGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GGEGNEHLALVGRVKPRSCGVAF*PPCPKP Trigger: GGGCTTCGGACACGGTGGCCAGAATGCCACCCCGCA...GCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AGATCCCTCCGGAAAGAAGCGCCGTTGGGTAGCAGCTTCCTTCCAGCGCCGCGTGCTGCCAGATGGCCCTaGGGGGTGGCATTCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RSLRKEAPLGSSFLPAPRAARWP*GVAFWP Trigger: TGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGC...ACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AGATCCCTCCGGAAAGAAGCGCCGTTGGGTAGCAGCTTCCTTCCAGCGCCGCGTCAGGCCCTGACACCCTaGAGCGTGGCTGCCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: RSLRKEAPLGSSFLPAPRQALTP*SVAARW Trigger: CCATCTGGCAGCCACGCTGCAGGGTGTCAGGGCCTG...ACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGTGTTCTTCAGTCCCTGTGTTGCTTGGTGGGTGACCGGTGGAGGGGTGCCCGCGCTGGCCAGTaGTGTGTGTGGCGCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SLGVLQSLCCLVGDRWRGARAGQ*CVWRRT Trigger: GGTCCTGCGCCACACACACCACTGGCCAGCGCGGGC...ACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | CCGGGGCTGCTGCGTACAGATGCAAGAGCCTCTCGGGCCTCTGGGGTTGAAGCCGCATCTGGCCCTGGTTaGCAGAGTCAAGCCGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGLLRTDARASRASGVEAASGPG*QSQAEE Trigger: CTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGC...GGCTTCAACCCCAGAGGCCCGAGAGGCTCTTGCATCTGTACGCAGCAGCCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | GACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGTCGTTGCCGCGCCTTaGGCTGCTCCGAGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DCGADRSFRDPSGKKRRWVVAAP*AAPSGH Trigger: GTGGCCGCTCGGAGCAGCCCAAGGCGCGGCAACGAC...CCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | GCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGTGTTCTTCAGGGCCAGTGGTGTGTGTaGCGCAGGACCCGAGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ALVLLPHPKLPASLGVLQGQWCV*RRTRGR Trigger: GCGCCCTCGGGTCCTGCGCCACACACACCACTGGCC...CTGAAGAACACCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | GAGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGCGCTGTCGCCGCTGTTaGCAACGCCGCGCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ESSRGQKRVLLWINGVPWRCRRC*QRRALA Trigger: TGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCG...CCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | GAGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGGTTCAGGCCGGGCTGTaGCTCCCCCATCCGTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: ESSRGQKRVLLWINGVPWVQAGL*LPHPFR Trigger: GCGGAACGGATGGGGGAGCCACAGCCCGGCCTGAAC...CCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGCTGCACTGTAGGGGCTaGGGAAGGCAGGTGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: TVVQIAVSEIPPERSAVGLHCRG*GRQVRR Trigger: CCGGCGCACCTGCCTTCCCCAGCCCCTACAGTGCAG...CCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | TTGGTGTTCTTCAGTCCCTGTGTTGCTTGGTGGGTGACCGGTGGAGGGGTCTTCGTCCGAAGCCCGCGCTaGCCAGTGGTGTGTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LVFFSPCVAWWVTGGGVFVRSPR*PVVCVA Trigger: CGCCACACACACCACTGGCCAGCGCGGGCTTCGGAC...GAAGACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | CCGGGGCTGCTGCGTACAGATGCAAGAGCCTCTCGGGCCTCTGGGGTTGAAGCCGGAAAGAAGCGCCGTTaGGTAGCAGCTTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGLLRTDARASRASGVEAGKKRR*VAASFQ Trigger: CTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCC...GGCTTCAACCCCAGAGGCCCGAGAGGCTCTTGCATCTGTACGCAGCAGCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR CAA 72 bp | TCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTaGGGTAGCAGCTTCCTTCCAGCGCCGCGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQFQRSLRKEAP*GSSFLPAPRPL Trigger: GAGGGGACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR TCA 90 bp | AAAGTCACGCGCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGAGCGTTGTGAACCTCTaGCCCTCGCGGCTCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: KVTRLSTAPTPQTASQPWSVVNL*PSRLCV Trigger: GACGCAGAGCCGCGAGGGTCAGAGGTTCACAACGCT...CCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGCGCGTGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AGCCTTGGTGTTCTTCAGTCCCTGTGTTGCTTGGTGGGTGACCGGTGGAGGGGTCTCCTTGTCACGACCTaGGGGCGGAGGGGAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLGVLQSLCCLVGDRWRGLLVTT*GRRGRE Trigger: TTCCCTTCCCCTCCGCCCGCAGGTCGTGACAAGGAG...ACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGGTCCATTCACCGCCGATaGCCCGGGGCTGCTGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: RAVVARKECSSGLTESPGSIHRR*PGAAAY Trigger: GTACGCAGCAGCCCCGGGGCATCGGCGGTGAATGGA...CCCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCCCGCACCCGCGGATGTaGCGAAGCCGCGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SPTAVINWRMVGPLDHHLPHPRM*RSRGAA Trigger: AGCTGCCCCGCGGCTTCGCCACATCCGCGGGTGCGG...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | AGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGGCGCGGCGTTAGAGGGTaGCCAGCCAGTTCCAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: RAVVARKECSSGLTESPGRGVRG*PASSSD Trigger: GTCGCTGGAACTGGCTGGCCACCCTCTAACGCCGCG...CCCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGGATGGCCCTGCGGGGTaGCATTCTGGCCACCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TVVQIAVSEIPPERSAVGDGPAG*HSGHRV Trigger: GACACGGTGGCCAGAATGCCACCCCGCAGGGCCATC...CCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGAGCGTGGCTGCCAGATaGCCCTGCGGGGTGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: TVVQIAVSEIPPERSAVGSVAAR*PCGVAF Trigger: GAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCT...CCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGGTTCCCGTCTTGTCGCTaGAGGCCCCGCAGACAGACC | + |
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Preference number: 4 (lower is better) Translates to: RAVVARKECSSGLTESPGFPSCR*RPRRQT Trigger: GGTCTGTCTGCGGGGCCTGCAGCGACAAGACGGGAA...CCCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AAAGTCACGCGCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGAGAGTAGGGCGACACTaGTGCACTGTAGGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KVTRLSTAPTPQTASQPWRVGRH*CTVGAG Trigger: CCCAGCCCCTACAGTGCAGCAGTGTCGCCCTACTCT...CCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGCGCGTGACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | AAAGTCACGCGCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGGCTGCTGCGTACAGATaGAAGAGCCTCTCGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KVTRLSTAPTPQTASQPWAAAYR*KSLSGL Trigger: GAGGCCCGAGAGGCTCTTGCATCTGTACGCAGCAGC...CCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGCGCGTGACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | GCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGTGTTCTTCAGCCGATGCCCCGGGGCTaGTGCGTACAGATGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: ALVLLPHPKLPASLGVLQPMPRG*CVQMQE Trigger: CTCTTGCATCTGTACGCAGCAGCCCCGGGGCATCGG...CTGAAGAACACCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| 3UTR CAA 72 bp | CCAGCCAGCCTTGGTGTTCTTCAGTCCCTGTGTTGCTaGGTGGGTGACCGGTGGAGGGGTCTTCTTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PASLGVLQSLCC*VGDRWRGLLLG Trigger: CCCCAAAAGAAGACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAAGGCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | GCGGCCTTATGGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACTCGCGGCTTCCGTCGTTaGCGCGCCTTGGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AALWGCLSPKGRGSKQVTRGFRR*RALGCS Trigger: GGAGCAGCCCAAGGCGCGGCAACGACGGAAGCCGCG...AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | AGATCCCTCCGGAAAGAAGCGCCGTTGGGTAGCAGCTTCCTTCCAGCGCCGCGTCCTGGCGCTGTCTCTTaGATTTGTAGCGTCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLRKEAPLGSSFLPAPRPGAVS*ICSVGS Trigger: AGAACCGACGCTACAAATGCAAGAGACAGCGCCAGG...ACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR GCA 90 bp | GCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGTGTTCTTCAGGTAGGGCGACACTGCTaGACTGTAGGGGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALVLLPHPKLPASLGVLQVGRHC*TVGAGE Trigger: TTCCCCAGCCCCTACAGTGCAGCAGTGTCGCCCTAC...CTGAAGAACACCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | GCGGCCTTATGGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACTCGCCCGCGTAGCAGGTaGCGTAGCCTGCGCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AALWGCLSPKGRGSKQVTRPRSR*RSLRRR Trigger: CCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCG...AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | AGCCTTGGTGTTCTTCAGTCCCTGTGTTGCTTGGTGGGTGACCGGTGGAGGGGTCTTCAGTCCCTGTGTTaGTTGGTGGGTGACCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGVLQSLCCLVGDRWRGLQSLC*LVGDRW Trigger: CCACCGGTCACCCACCAAGCAACACAGGGACTGAAG...ACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | GACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGATGCCCCGGGGCTGCTaGGTACAGATGCAAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DCGADRSFRDPSGKKRRWMPRGC*VQMQEP Trigger: AGGCTCTTGCATCTGTACGCAGCAGCCCCGGGGCAT...CCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGAAGGGAACGAGCATCTGGCCCTGGTTGGCAGAGTCAAGCCGAGGAGCGTGGCCAGAAAAGAGTaGTCCTCTGGATTAACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGEGNEHLALVGRVKPRSVARKE*SSGLTE Trigger: CTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCAC...GCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR TCA 90 bp | GCGGCCTTATGGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACTCCGCCACCAGCGTTGTaGACCTCTGACCCTCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AALWGCLSPKGRGSKQVTPPPAL*TSDPRG Trigger: GCCGCGAGGGTCAGAGGTTCACAACGCTGGTGGCGG...AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACAGCCTCACCAGGCCCTaGCACCCTGCAGCGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTAVINWRMVGPLDHSLTRP*HPAAWL Trigger: CAGCCACGCTGCAGGGTGTCAGGGCCTGGTGAGGCT...GTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGAAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | TTGGTGTTCTTCAGTCCCTGTGTTGCTTGGTGGGTGACCGGTGGAGGGGTCTTCACGAGCATCTGGCCCTaGTTGGCAGAGTCAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVFFSPCVAWWVTGGGVFTSIWP*LAESSR Trigger: TCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGT...GAAGACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGTACTGCTCCCACACCCCAAACTGCCAGCCAGCCTTGGTGTTCTTCAGTTGGTGGGTGACCGGTaGAGGGGTCTTCTTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALVLLPHPKLPASLGVLQLVGDR*RGLLLG Trigger: CCCCAAAAGAAGACCCCTCCACCGGTCACCCACCAA...CTGAAGAACACCAAGGCTGGCTGGCAGTTTGGGGTGTGGGAGCAGTACTAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTCGTGGCCAGAAAAGAGTGCTCCTCTGGATTAACGGAGTCCCCTGGGCCAGGAGAGCAGTCGTaGCCAGAAAAGAGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVVARKECSSGLTESPGPGEQS*PEKSAP Trigger: AGGAGCACTCTTTTCTGGCCACGACTGCTCTCCTGG...CCCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTTCTGGCCACGACTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCCCTGTGTTGCTTGGTaGGTGACCGGTGGAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSPTAVINWRMVGPLDHPCVAW*VTGGGV Trigger: GACCCCTCCACCGGTCACCCACCAAGCAACACAGGG...GTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGAAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCAGTCCCTGTGTTGCTTaGTGGGTGACCGGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPTAVINWRMVGPLDHHLSPCVA*WVTGGG Trigger: CCCTCCACCGGTCACCCACCAAGCAACACAGGGACT...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCATTAACGGAGTCCCCTaGGGCGCGGCCTTATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTAVINWRMVGPLDHHLINGVP*GAALWG Trigger: TCCCCATAAGGCCGCGCCCCAGGGGACTCCGTTAAT...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS-3UTR TCA 90 bp | AAGCAGGTTACTCTTCGTGAACTTCCCGGATCCTCAAGTTCCCAGCTCTTCAGCGGGCCTTTAACTGGGTaGCTGTGGTGCAGATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQVTLRELPGSSSSQLFSGPLTG*LWCRSQ Trigger: CTGCGATCTGCACCACAGTCACCCAGTTAAAGGCCC...GCTGAAGAGCTGGGAACTTGAGGATCCGGGAAGTTCACGAAGAGTAACCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCTCCCACACCCCAAACTaGCAGCCAGCCTTGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTAVINWRMVGPLDHHLSHTPN*QPALVF Trigger: GAACACCAAGGCTGGCTGGCAGTTTGGGGTGTGGGA...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | GACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGAAAAGAGTGCTCCTCTaGATTAACGGAGTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCGADRSFRDPSGKKRRWKRVLL*INGVPW Trigger: CCAGGGGACTCCGTTAATCCAGAGGAGCACTCTTTT...CCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CCA 90 bp | GACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGACAGCTGTCATTAATTaGAGGATGGTAGGCCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DCGADRSFRDPSGKKRRWTAVIN*RMVGPL Trigger: TAGCGGGCCTACCATCCTCCAATTAATGACAGCTGT...CCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR TCA 90 bp | GCGGCCTTATGGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACTGCAGGTTACTCTTCGTaGACTTCCCGGATCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AALWGCLSPKGRGSKQVTAGYSS*TSRILK Trigger: CTTGAGGATCCGGGAAGTTCACGAAGAGTAACCTGC...AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR GCA 90 bp | GCGGCCTTATGGGGATGTTTAAGTCCCAAAGGAAGAGGCTCAAAGCAGGTTACTTATATTTATTGGAGGTaGTGTGCTGTACAAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AALWGCLSPKGRGSKQVTYIYWR*CAVQRD Trigger: ATCTCTTTGTACAGCACAGCACCTCCAATAAATATA...AGTAACCTGCTTTGAGCCTCTTCCTTTGGGACTTAAACATCCCCATAAGGCCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS CCA 90 bp | GCGGCCACCCCGCACGCTGTCGCCGCTGTTGCCAACGCCGCGCTCTaGCACCCTGGTCCCGCCGCCGAGGGGCGAGGCCGCGTTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AATPHAVAAVANAAL*HPGPAAEGRGRVQA Trigger: GGCCTGAACGCGGCCTCGCCCCTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGGGTGGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | CCTTGGGCTGCTCCGAGCGGCCACCCCGCACGCTGTCGCCGCTGTTaGCAACGCCGCGCTCTGGCACCCTGGTCCCGCCGCCGAGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PWAAPSGHPARCRRC*QRRALAPWSRRRGA Trigger: CGCCCCTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGGGTGGCCGCTCGGAGCAGCCCAAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS CCA 90 bp | CCCGCACGCTGTCGCCGCTGTTGCCAACGCCGCGCTCTGGCACCCTaGTCCCGCCGCCGAGGGGCGAGGCCGCGTTCAGGCCGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PARCRRCCQRRALAP*SRRRGARPRSGRAV Trigger: CACAGCCCGGCCTGAACGCGGCCTCGCCCCTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 90 bp | GGCCCTGCGGGGTGGCATTCTGGCCACCGTGTCCGAAGCCCGCGCTaGCCAGTGGTGTGTGTGGCGCAGGACCCGAGGGCGCGCCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GPAGWHSGHRVRSPR*PVVCVAQDPRARPR Trigger: ACGCGGGCGCGCCCTCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGTGGCCAGAATGCCACCCCGCAGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 90 bp | CGGGGTGGCATTCTGGCCACCGTGTCCGAAGCCCGCGCTGGCCAGTaGTGTGTGTGGCGCAGGACCCGAGGGCGCGCCCGCGTAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGILATVSEARAGQ*CVWRRTRGRARVAG Trigger: ACCTGCTACGCGGGCGCGCCCTCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGTGGCCAGAATGCCACCCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | GTGGTGTGTGTGGCGCAGGACCCGAGGGCGCGCCCGCGTAGCAGGTaGCGTAGCCTGCGCCGTAGGGTGCTCCGCTGTAGCCTCCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVCVAQDPRARPRSR*RSLRRRVLRCSLRS Trigger: GCTACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCGCGCCCTCGGGTCCTGCGCCACACACACCAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | CCTCACCAGGCCCTGACACCCTGCAGCGTGGCTGCCAGATGGCCCTaGGGGGTGGCATTCTGGCCACCGTGTCCGAAGCCCGCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHQALTPCSVAARWP*GVAFWPPCPKPALA Trigger: GGCCAGCGCGGGCTTCGGACACGGTGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGTCAGGGCCTGGTGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 90 bp | ATTCTGGCCACCGTGTCCGAAGCCCGCGCTGGCCAGTGGTGTGTGTaGCGCAGGACCCGAGGGCGCGCCCGCGTAGCAGGTGCCGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILATVSEARAGQWCV*RRTRGRARVAGAVA Trigger: GGCTACGGCACCTGCTACGCGGGCGCGCCCTCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGTGGCCAGAAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | TGGCGCAGGACCCGAGGGCGCGCCCGCGTAGCAGGTGCCGTAGCCTaGGCCGTAGGGTGCTCCGCTGTAGCCTCCGTAGCAAGAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRRTRGRARVAGAVA*AVGCSAVASVARVG Trigger: CCCTACTCTTGCTACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCGCGCCCTCGGGTCCTGCGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 90 bp | AGCCTCCGTAGCAAGAGTAGGGCGACACTGCTGCACTGTAGGGGCTaGGGAAGGCAGGTGCGCCGGGCCCGGGGCCCAGGCAGGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRSKSRATLLHCRG*GRQVRRARGPGRAC Trigger: GCAAGCCCTGCCTGGGCCCCGGGCCCGGCGCACCTGCCTTCCCCAGCCCCTACAGTGCAGCAGTGTCGCCCTACTCTTGCTACGGAGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | CGAGGGCGCGCCCGCGTAGCAGGTGCCGTAGCCTGCGCCGTAGGGTaGTCCGCTGTAGCCTCCGTAGCAAGAGTAGGGCGACACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGRARVAGAVACAVG*SAVASVARVGRHCC Trigger: GCAGCAGTGTCGCCCTACTCTTGCTACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCGCGCCCTCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 90 bp | ACACCCTGCAGCGTGGCTGCCAGATGGCCCTGCGGGGTGGCATTCTaGCCACCGTGTCCGAAGCCCGCGCTGGCCAGTGGTGTGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TPCSVAARWPCGVAF*PPCPKPALASGVCG Trigger: GCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGTGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | GAGGTCCGGGTGAGGAGCGGCACCCTGAACTTCCCGTCTTGTCGCTaGAGGCCCCGCAGACAGACCCAAGCTCTGGGACAGACGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVRVRSGTLNFPSCR*RPRRQTQALGQTPS Trigger: GCTGGGCGTCTGTCCCAGAGCTTGGGTCTGTCTGCGGGGCCTGCAGCGACAAGACGGGAAGTTCAGGGTGCCGCTCCTCACCCGGACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 90 bp | GGTTGGCAGAGTCAAGCCGAGGAGCCTCACCAGGCCCTGACACCCTaGAGCGTGGCTGCCAGATGGCCCTGCGGGGTGGCATTCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWQSQAEEPHQALTP*SVAARWPCGVAFWP Trigger: TGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGTCAGGGCCTGGTGAGGCTCCTCGGCTTGACTCTGCCAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | GACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGCGCGGCTTCCGTCGTaGCCGCGCCTTGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DCGADRSFRDPSGKKRRWARLPS*PRLGLL Trigger: GAGCAGCCCAAGGCGCGGCAACGACGGAAGCCGCGC...CCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | TTGGTGTTCTTCAGTCCCTGTGTTGCTTGGTGGGTGACCGGTGGAGGGGTCTTCCGCCGCGTCCCCTCCTaGTCACGACCTGCGGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVFFSPCVAWWVTGGGVFRRVPS*SRPAGG Trigger: TCCGCCCGCAGGTCGTGACAAGGAGGGGACGCGGCG...GAAGACCCCTCCACCGGTCACCCACCAAGCAACACAGGGACTGAAGAACACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGTGCAGATCGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGACGCTGTCGCCGCTGTaGCCAACGCCGCGCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVVQIAVSEIPPERSAVGTLSPL*PTPRSG Trigger: GCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGT...CCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCGATCTGCACCACAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | CCGGGGCTGCTGCGTACAGATGCAAGAGCCTCTCGGGCCTCTGGGGTTGAAGCCTGGAGGGGTCTTCTTTaGGGGGAAGAACGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLLRTDARASRASGVEAWRGLL*GEERPR Trigger: CCTGGGACGTTCTTCCCCCAAAAGAAGACCCCTCCA...GGCTTCAACCCCAGAGGCCCGAGAGGCTCTTGCATCTGTACGCAGCAGCCCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCCTCCGGAAAGAAGCGCCGTTGGGTAGCAGCTTCCTTCCAGCGCCGCGTCAGTCCCTGTGTTGCTaGGTGGGTGACCGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLRKEAPLGSSFLPAPRQSLCC*VGDRWR Trigger: CCTCCACCGGTCACCCACCAAGCAACACAGGGACTG...ACGCGGCGCTGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCCGTCGTTGCCGCGCCTaGGGCTGCTCCGAGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPTAVINWRMVGPLDHHLRRCRA*GCSERP Trigger: TGGCCGCTCGGAGCAGCCCAAGGCGCGGCAACGACG...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | TCCCCAACAGCTGTCATTAATTGGAGGATGGTAGGCCCGCTAGATCACCATCTCCCTGAACTTCCCGTCTaGTCGCTGCAGGCCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPTAVINWRMVGPLDHHLPELPV*SLQAPQ Trigger: CTGCGGGGCCTGCAGCGACAAGACGGGAAGTTCAGG...GAGATGGTGATCTAGCGGGCCTACCATCCTCCAATTAATGACAGCTGTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS-3UTR CAA 90 bp | CGCAGTTTCAGAGATCCCTCCGGAAAGAAGCGCCGTTGGGTAGCAGCTTCCTTCCGGAAAGAAGCGCCGTaGGGTAGCAGCTTCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSFRDPSGKKRRWVAASFRKEAP*GSSFLP Trigger: TGGAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCG...GAAGGAAGCTGCTACCCAACGGCGCTTCTTTCCGGAGGGATCTCTGAAACTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS CCA 72 bp | CCGCACGCTGTCGCCGCTGTTGCCAACGCCGCGCTCTaGCACCCTGGTCCCGCCGCCGAGGGGCGAGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PHAVAAVANAAL*HPGPAAEGRGR Trigger: GCGGCCTCGCCCCTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS CAA 90 bp | GCCTTGGGCTGCTCCGAGCGGCCACCCCGCACGCTGTCGCCGCTGTaGCCAACGCCGCGCTCTGGCACCCTGGTCCCGCCGCCGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALGCSERPPRTLSPL*PTPRSGTLVPPPRG Trigger: GCCCCTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGGGTGGCCGCTCGGAGCAGCCCAAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS GCA 72 bp | GCTCCGAGCGGCCACCCCGCACGCTGTCGCCGCTGTTaGCAACGCCGCGCTCTGGCACCCTGGTCCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: APSGHPARCRRC*QRRALAPWSRR Trigger: GCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGGGTGGCCGCTCGGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
||
| CDS GCA 72 bp | AGCACGCGCGGCTTCCGTCGTTGCCGCGCCTTGGGCTaGTCCGAGCGGCCACCCCGCACGCTGTCGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: STRGFRRCRALG*SERPPRTLSPL Trigger: CAGCGGCGACAGCGTGCGGGGTGGCCGCTCGGAGCAGCCCAAGGCGCGGCAACGACGGAAGCCGCGCGTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | TGTCGCCGCTGTTGCCAACGCCGCGCTCTGGCACCCTaGTCCCGCCGCCGAGGGGCGAGGCCGCGTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CRRCCQRRALAP*SRRRGARPRSG Trigger: GCCTGAACGCGGCCTCGCCCCTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CAA 72 bp | TGCTCCGAGCGGCCACCCCGCACGCTGTCGCCGCTGTaGCCAACGCCGCGCTCTGGCACCCTGGTCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: CSERPPRTLSPL*PTPRSGTLVPP Trigger: CGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGGGTGGCCGCTCGGAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 72 bp | GTGGCGCAGGACCCGAGGGCGCGCCCGCGTAGCAGGTaGCGTAGCCTGCGCCGTAGGGTGCTCCGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VAQDPRARPRSR*RSLRRRVLRCS Trigger: GCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCGCGCCCTCGGGTCCTGCGCCAC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | ACCGTGTCCGAAGCCCGCGCTGGCCAGTGGTGTGTGTaGCGCAGGACCCGAGGGCGCGCCCGCGTAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TVSEARAGQWCV*RRTRGRARVAG Trigger: ACCTGCTACGCGGGCGCGCCCTCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 72 bp | ACCCGAGGGCGCGCCCGCGTAGCAGGTGCCGTAGCCTaGGCCGTAGGGTGCTCCGCTGTAGCCTCCGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: TRGRARVAGAVA*AVGCSAVASVA Trigger: TGCTACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCGCGCCCTCGGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | AGCAAGAGTAGGGCGACACTGCTGCACTGTAGGGGCTaGGGAAGGCAGGTGCGCCGGGCCCGGGGCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SKSRATLLHCRG*GRQVRRARGPG Trigger: GCCTGGGCCCCGGGCCCGGCGCACCTGCCTTCCCCAGCCCCTACAGTGCAGCAGTGTCGCCCTACTCTTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | GGGTGGCATTCTGGCCACCGTGTCCGAAGCCCGCGCTaGCCAGTGGTGTGTGTGGCGCAGGACCCGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: GWHSGHRVRSPR*PVVCVAQDPRA Trigger: CGCCCTCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGTGGCCAGAATGCCACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | CACCCTGCAGCGTGGCTGCCAGATGGCCCTGCGGGGTaGCATTCTGGCCACCGTGTCCGAAGCCCGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HPAAWLPDGPAG*HSGHRVRSPRW Trigger: CCAGCGCGGGCTTCGGACACGGTGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 72 bp | GCCCTGACACCCTGCAGCGTGGCTGCCAGATGGCCCTaGGGGGTGGCATTCTGGCCACCGTGTCCGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: ALTPCSVAARWP*GVAFWPPCPKP Trigger: GGGCTTCGGACACGGTGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGTCAGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | CACCAGGCCCTGACACCCTGCAGCGTGGCTGCCAGATaGCCCTGCGGGGTGGCATTCTGGCCACCGTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: HQALTPCSVAAR*PCGVAFWPPCP Trigger: CGGACACGGTGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGTCAGGGCCTGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CAA 90 bp | GGCCGAGGAGGTCCGGGTGAGGAGCGGCACCCTGAACTTCCCGTCTaGTCGCTGCAGGCCCCGCAGACAGACCCAAGCTCTGGGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: GRGGPGEERHPELPV*SLQAPQTDPSSGTD Trigger: GTCTGTCCCAGAGCTTGGGTCTGTCTGCGGGGCCTGCAGCGACAAGACGGGAAGTTCAGGGTGCCGCTCCTCACCCGGACCTCCTCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 72 bp | GCCCGCGTAGCAGGTGCCGTAGCCTGCGCCGTAGGGTaGTCCGCTGTAGCCTCCGTAGCAAGAGTAGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: ARVAGAVACAVG*SAVASVARVGR Trigger: TCGCCCTACTCTTGCTACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | GGGCGGAGGGGAAGGGAACGAGCATCTGGCCCTGGTTaGCAGAGTCAAGCCGAGGAGCCTCACCAGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GRRGRERASGPG*QSQAEEPHQAL Trigger: CAGGGCCTGGTGAGGCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | CTGCGGGCGGAGGGGAAGGGAACGAGCATCTGGCCCTaGTTGGCAGAGTCAAGCCGAGGAGCCTCACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LRAEGKGTSIWP*LAESSRGASPG Trigger: GCCTGGTGAGGCTCCTCGGCTTGACTCTGCCAACCAGGGCCAGATGCTCGTTCCCTTCCCCTCCGCCCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 72 bp | GCTGTAGCCTCCGTAGCAAGAGTAGGGCGACACTGCTaGACTGTAGGGGCTGGGGAAGGCAGGTGCGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: AVASVARVGRHC*TVGAGEGRCAG Trigger: CCCGGCGCACCTGCCTTCCCCAGCCCCTACAGTGCAGCAGTGTCGCCCTACTCTTGCTACGGAGGCTACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CCA 72 bp | AGGACGGGCACAGCTACTCGGCGCGGCGTTAGAGGGTaGCCAGCCAGTTCCAGCGACTTGTCCTGGCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RTGTATRRGVRG*PASSSDLSWRC Trigger: ACAGCGCCAGGACAAGTCGCTGGAACTGGCTGGCCACCCTCTAACGCCGCGCCGAGTAGCTGTGCCCGTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS CAA 72 bp | GGTCCGGGTGAGGAGCGGCACCCTGAACTTCCCGTCTaGTCGCTGCAGGCCCCGCAGACAGACCCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPGEERHPELPV*SLQAPQTDPSS Trigger: AGAGCTTGGGTCTGTCTGCGGGGCCTGCAGCGACAAGACGGGAAGTTCAGGGTGCCGCTCCTCACCCGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS GCA 72 bp | GTGAGGAGCGGCACCCTGAACTTCCCGTCTTGTCGCTaGAGGCCCCGCAGACAGACCCAAGCTCTGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: VRSGTLNFPSCR*RPRRQTQALGQ Trigger: CTGTCCCAGAGCTTGGGTCTGTCTGCGGGGCCTGCAGCGACAAGACGGGAAGTTCAGGGTGCCGCTCCTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS TCA 72 bp | TCTGTCACCGCCGCCGCCACCAGCGTTGTGAACCTCTaGCCCTCGCGGCTCTGCGTCCATTCTCAGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: SVTAAATSVVNL*PSRLCVHSQVL Trigger: CAGTACCTGAGAATGGACGCAGAGCCGCGAGGGTCAGAGGTTCACAACGCTGGTGGCGGCGGCGGTGACAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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| CDS TCA 72 bp | TCCAGCTTTCTGTCACCGCCGCCGCCACCAGCGTTGTaGACCTCTGACCCTCGCGGCTCTGCGTCCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSFLSPPPPPAL*TSDPRGSASIL Trigger: GAGAATGGACGCAGAGCCGCGAGGGTCAGAGGTTCACAACGCTGGTGGCGGCGGCGGTGACAGAAAGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325017.4 |
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