Pregenerated sensors for NKX2-5 (Homo sapiens)
Ensembl gene IDs: ENSG00000183072Ensembl transcript IDs: ENST00000329198.5, ENST00000424406.2, ENST00000517440.1, ENST00000521848.1
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGGCGGGCGACGGCGAGATAGCAAAGGCCCGGGCGCCCGGCCCTaGCTCGCGGAATGGGCGGCCAGATCTCAGGCCCTGCGTGCCCGA | + |
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Preference number: 1 (lower is better) Translates to: VGGRRRDSKGPGARP*LAEWAARSQALRAR Trigger: TCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGGGCGCCCGGGCCTTTGCTATCTCGCCGTCGCCCGCCCAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 90 bp | GCGCCCGGCCCTGGCTCGCGGAATGGGCGGCCAGATCTCAGGCCCTaGGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: APGPGSRNGRPDLRP*VPELSPSSNRGCPW Trigger: CCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGGGCGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR CCA 90 bp | CGGCGAGATAGCAAAGGCCCGGGCGCCCGGCCCTGGCTCGCGGAATaGGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RRDSKGPGARPWLAE*AARSQALRARAQSQ Trigger: CTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGGGCGCCCGGGCCTTTGCTATCTCGCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 90 bp | CCGGCCCTGGCTCGCGGAATGGGCGGCCAGATCTCAGGCCCTGCGTaGCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTC | + |
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Preference number: 1 (lower is better) Translates to: PALARGMGGQISGPA*PSSVPVPTGGAHGL Trigger: GAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR CCA 90 bp | AGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGAGCGCCCAGCTaGCTGCGGCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACG | + |
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Preference number: 1 (lower is better) Translates to: RDPRGGHCVLPGAPS*LRLTLPSALGATDT Trigger: CGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCAGCCAGCTGGGCGCTCCAGGCAGGACACAGTGGCCTCCACGAGGATCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR CCA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTaGAGGCCACTGTGTCCTGCCTGGAGCGCCCAGCTGGCTGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: LTYGARPHSNGKGSS*RPLCPAWSAQLAAA Trigger: AGCCGCAGCCAGCTGGGCGCTCCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR GCA 90 bp | GCCACTGTGTCCTGCCTGGAGCGCCCAGCTGGCTGCGGCTCACTCTaGCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATTTG | + |
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Preference number: 1 (lower is better) Translates to: ATVSCLERPAGCGSL*QVHWEPPTRLTQHL Trigger: CAAATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCAGCCAGCTGGGCGCTCCAGGCAGGACACAGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR TCA 90 bp | CTGAGGGGGAACAGAGAGGCAGAGAGACGCTTGGTAAGAGCGGCTTaGCCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: LRGNREAERRLVRAA*PTERGRTVMVRDPR Trigger: ACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCCTCTCTGTTCCCCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| 3UTR GCA 90 bp | GGGGGACAGCTAAGACACCAGGCTGCAGGATCACTCATTGCACGCTaGATAATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGC | + |
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Preference number: 1 (lower is better) Translates to: GGQLRHQAAGSLIAR*IIAATNSPVRKNKR Trigger: GCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGATTATGCAGCGTGCAATGAGTGATCCTGCAGCCTGGTGTCTTAGCTGTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 90 bp | TCGTCATTTCTTACAGCAATAGGTAAAAACATAAATACGGGTGGGTaGGTGGGCGGGCGACGGCGAGATAGCAAAGGCCCGGGCGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: SSFLTAIGKNINTGG*VGGRRRDSKGPGAR Trigger: CCGGGCGCCCGGGCCTTTGCTATCTCGCCGTCGCCCGCCCACGCACCCACCCGTATTTATGTTTTTACCTATTGCTGTAAGAAATGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR-3UTR GCA 90 bp | GCGGCTTCCTCCGCCGTCGCGCCCGGGGCCGCTCCGCGTTGTCCGCCTCTGTCTAAAACGGGAGGTCTCTaGCCTCGGGGCAGTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: AASSAVAPGAAPRCPPLSKTGGL*PRGSSH Trigger: GTGTGAACTGCCCCGAGGGCAGAGACCTCCCGTTTT...AGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR-3UTR TCA 90 bp | CCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTGAGTCAGGGAGCTGTTaGGGTGGGATCGGTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PSSVPVPTGGAHGLSEGTESGSC*GGIGQG Trigger: ACCCTGACCGATCCCACCTCAACAGCTCCCTGACTC...AGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCCCTGGAGCGCCCAGCTaGCTGCGGCTCACTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GKSGLTYGARPHSNGKGSPGAPS*LRLTLP Trigger: TGGCAGAGTGAGCCGCAGCCAGCTGGGCGCTCCAGG...GGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTGGTAAGGGATCCTCGTaGAGGCCACTGTGTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GRETLGKSGLTYGARPHSGKGSS*RPLCPA Trigger: GGCAGGACACAGTGGCCTCCACGAGGATCCCTTACC...ACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTCCGCTAAGACACCAGGCTaGAGGATCACTCATTGCACG | + |
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Preference number: 2 (lower is better) Translates to: ELSPSSNRGCPWTLGGHSAKTPG*RITHCT Trigger: CGTGCAATGAGTGATCCTGCAGCCTGGTGTCTTAGC...GGAGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR CAA 90 bp | TCTGAGGGGGAACAGAGAGGCAGAGAGACGCTTGGTAAGAGCGGCTaGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCG | + |
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Preference number: 2 (lower is better) Translates to: SEGEQRGRETLGKSG*TYGARPHSNGKGSS Trigger: CGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCCTCTCTGTTCCCCCTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| 3UTR-3UTR CCA 90 bp | CAAACGCGCGTGGGACAGAAAAAGTTCCTAGGTCTCCGCAGGAGTGAATGCAAAAGGGAGCTGTTGAGGTaGGATCGGTCAGGGTCGCGC | + |
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Preference number: 2 (lower is better) Translates to: QTRVGQKKFLGLRRSECKRELLR*DRSGSR Trigger: GCGCGACCCTGACCGATCCCACCTCAACAGCTCCCT...TTTGCATTCACTCCTGCGGAGACCTAGGAACTTTTTCTGTCCCACGCGCGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR CCA 72 bp | AGCAAAGGCCCGGGCGCCCGGCCCTGGCTCGCGGAATaGGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SKGPGARPWLAE*AARSQALRARA Trigger: AGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGGGCGCCCGGGCCTTTGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR CCA 72 bp | CGACGGCGAGATAGCAAAGGCCCGGGCGCCCGGCCCTaGCTCGCGGAATGGGCGGCCAGATCTCAGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: RRRDSKGPGARP*LAEWAARSQAL Trigger: CAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGGGCGCCCGGGCCTTTGCTATCTCGCCGTCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 72 bp | CCTGGCTCGCGGAATGGGCGGCCAGATCTCAGGCCCTaGGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGG | + |
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Preference number: 3 (lower is better) Translates to: PGSRNGRPDLRP*VPELSPSSNRG Trigger: CCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR-3UTR CAA 90 bp | GGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGAGAGTCAGGGAGCTGTaGAGGTGGGATCGGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GGQISGPACPSSVPVPTGRVREL*RWDRSG Trigger: CCCTGACCGATCCCACCTCAACAGCTCCCTGACTCT...CCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 72 bp | TCCTGCCTGGAGCGCCCAGCTGGCTGCGGCTCACTCTaGCAAGTGCACTGGGAGCCACCGACACGTCTCACT | + |
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Preference number: 3 (lower is better) Translates to: SCLERPAGCGSL*QVHWEPPTRLT Trigger: AGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCAGCCAGCTGGGCGCTCCAGGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR GCA 72 bp | TTGTCCGCCTCTGTCTTCTCCAGCTCCACCGCCTTCTaGAGCGCGCACAGCTCTGAGGGGGAACAGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LSASVFSSSTAF*SAHSSEGEQRG Trigger: GCCTCTCTGTTCCCCCTCAGAGCTGTGCGCGCTGCAGAAGGCGGTGGAGCTGGAGAAGACAGAGGCGGACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| 3UTR GCA 72 bp | TGGCTCAAGGCGCTGGAGAACAAAACGGGAGGTCTCTaGCCTCGGGGCAGTTCACACCCTGGTGAGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: WLKALENKTGGL*PRGSSHPGEGD Trigger: GTCTCCCTCACCAGGGTGTGAACTGCCCCGAGGGCAGAGACCTCCCGTTTTGTTCTCCAGCGCCTTGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| 3UTR TCA 72 bp | AACAGAGAGGCAGAGAGACGCTTGGTAAGAGCGGCTTaGCCTACGGAGCGCGGCCGCACAGTAATGGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: NREAERRLVRAA*PTERGRTVMVR Trigger: CCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCCTCTCTGTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| 3UTR GCA 72 bp | CTAAGACACCAGGCTGCAGGATCACTCATTGCACGCTaGATAATCGCCGCCACAAACTCTCCCGTGCGCAAG | + |
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Preference number: 3 (lower is better) Translates to: LRHQAAGSLIAR*IIAATNSPVRK Trigger: CTTGCGCACGGGAGAGTTTGTGGCGGCGATTATGCAGCGTGCAATGAGTGATCCTGCAGCCTGGTGTCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 72 bp | GGGACAGCTAAGACACCAGGCTGCAGGATCACTCATTaGACGCTGCATAATCGCCGCCACAAACTCTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: GTAKTPGCRITH*TLHNRRHKLSR Trigger: ACGGGAGAGTTTGTGGCGGCGATTATGCAGCGTGCAATGAGTGATCCTGCAGCCTGGTGTCTTAGCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR GCA 72 bp | CTTACAGCAATAGGTAAAAACATAAATACGGGTGGGTaGGTGGGCGGGCGACGGCGAGATAGCAAAGGCCCG | + |
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Preference number: 3 (lower is better) Translates to: LTAIGKNINTGG*VGGRRRDSKGP Trigger: CGGGCCTTTGCTATCTCGCCGTCGCCCGCCCACGCACCCACCCGTATTTATGTTTTTACCTATTGCTGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | GCGGCTTCCTCCGCCGTCGCGCCCGGGGCCGCTCCGCGTTGTCCGCCTCTGTCTCGGCGGCAGCCAGGCTaGGCTGCTGCTGTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AASSAVAPGAAPRCPPLSRRQPG*AAAVPG Trigger: ACCTGGAACAGCAGCAGCGCAGCCTGGCTGCCGCCG...AGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GCGGCTTCCTCCGCCGTCGCGCCCGGGGCCGCTCCGCGTTGTCCGCCTCTGTCTAGGCAGACGCACACTTaGCCGGTGAAGGCGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: AASSAVAPGAAPRCPPLSRQTHT*PVKARG Trigger: GCCGCGCGCCTTCACCGGCCAAGTGTGCGTCTGCCT...AGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GCGGCTTCCTCCGCCGTCGCGCCCGGGGCCGCTCCGCGTTGTCCGCCTCTGTCTCAGGGCTGGGGAACATaGTGGCAGCGCCAGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: AASSAVAPGAAPRCPPLSQGWGT*WQRQSH Trigger: GTGAGACTGGCGCTGCCACCATGTTCCCCAGCCCTG...AGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | AGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTCCTGGGGGCGCACACTTGGCCGGTaGAGGCGCGCGGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SPSSNRGCPWTLGGHSWGRTLGR*RRAAQL Trigger: GAGCTGGGCCGCGCGCCTTCACCGGCCAAGTGTGCG...CCCCCAGGAGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | GGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGAGCACGCTGGCCAGCTaGTCGCGTTCGGGGGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GGQISGPACPSSVPVPTGSTLAS*SRSGAD Trigger: GTCGGCCCCCGAACGCGACCAGCTGGCCAGCGTGCT...CCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR TCA 90 bp | GCCCGGCCCTGGCTCGCGGAATGGGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGAGTCAGGGAGCTGTTaGGGTGGGATCGGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: ARPWLAEWAARSQALRARESGSC*GGIGQG Trigger: ACCCTGACCGATCCCACCTCAACAGCTCCCTGACTC...TCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGGCCGGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | AGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTCCTGGGGGGCTGCCCACGGCCCCTaGCAGCTTCCCTGCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SPSSNRGCPWTLGGHSWGAAHGP*QLPCMV Trigger: CACCATGCAGGGAAGCTGCCAGGGGCCGTGGGCAGC...CCCCCAGGAGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACT 69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | AGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATCGCGCACCAGCACTaGCACCGCGATCCTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSQALRARAQSQFQPGVPIAHQH*HRDPAG Trigger: GCCCGCAGGATCGCGGTGCCAGTGCTGGTGCGCGAT...GGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTCCTGTTGGCGGCGGCAGTaGCCGGCTGCGCTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ELSPSSNRGCPWTLGGHSCWRRQ*PAALGK Trigger: CTTCCCCAGCGCAGCCGGCCACTGCCGCCGCCAACA...GGAGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | GTCAGGGAGCTGTTGAGGTGGGATCGGTCAGGGTCGCGCCACGCGGGTCCCTTCCCAGATCTCAGGCCCTaGGTGCCCGAGCTCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VRELLRWDRSGSRHAGPFPDLRP*VPELSP Trigger: GGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGG...GAAGGGACCCGCGTGGCGCGACCCTGACCGATCCCACCTCAACAGCTCCCTGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | AGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCGTCGCTGTAGGCACGTaGATAGAAGGCGGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: RSQALRARAQSQFQPGVPVAVGT*IEGGGG Trigger: GCCGCCCCCGCCTTCTATCCACGTGCCTACAGCGAC...GGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | GGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAGCACGCTGGCCAGCTaGTCGCGTTCGGGGGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GRETLGKSGLTYGARPHSSTLAS*SRSGAD Trigger: GTCGGCCCCCGAACGCGACCAGCTGGCCAGCGTGCT...ACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | GGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCCGCACACTTGGCCGGTaGAGGCGCGCGGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GKSGLTYGARPHSNGKGSRTLGR*RRAAQL Trigger: GAGCTGGGCCGCGCGCCTTCACCGGCCAAGTGTGCG...GGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCACGCACACTTGGCCGGTaGAGGCGCGCGGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LTYGARPHSNGKGSSWRPRTLGR*RRAAQL Trigger: GAGCTGGGCCGCGCGCCTTCACCGGCCAAGTGTGCG...TGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | CGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGGGCAGAAAGCGGCGCTaGCCACGGCCCCTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RPHSNGKGSSWRPLCPAWGRKRR*PRPLAA Trigger: AGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTGCC...CCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | GCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGAGCTCCACCGCCTTCTaGAGCGCGCACAGCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AARSQALRARAQSQFQPGSSTAF*SAHSSF Trigger: GAAAGAGCTGTGCGCGCTGCAGAAGGCGGTGGAGCT...CCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | AGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTCCTGGGGGAGTTCCAACCGGGGGTaGCCATGGACTCTCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SPSSNRGCPWTLGGHSWGSSNRG*PWTLGG Trigger: CCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACT...CCCCCAGGAGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | GTCAGGGAGCTGTTGAGGTGGGATCGGTCAGGGTCGCGCCACGCGGGTCCCTTCCAGGGCTGGGGAACATaGTGGCAGCGCCAGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: VRELLRWDRSGSRHAGPFQGWGT*WQRQSH Trigger: GTGAGACTGGCGCTGCCACCATGTTCCCCAGCCCTG...GAAGGGACCCGCGTGGCGCGACCCTGACCGATCCCACCTCAACAGCTCCCTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | CCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: PACPSSVPVPTGGAHGLSSRVLG*VGVAVG Trigger: GCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGA...CGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | CCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTATACGGGTGGGTGCGTaGGCGGGCGACGGCGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: PSSVPVPTGGAHGLSEGTIRVGA*AGDGEI Trigger: TATCTCGCCGTCGCCCGCCCACGCACCCACCCGTAT...AGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR TCA 90 bp | GGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTCGTAGGCCTCTGGCTTaGAGGCGGCCAGCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRETLGKSGLTYGARPHSRRPLA*RRPACR Trigger: CCTGCATGCTGGCCGCCTTCAAGCCAGAGGCCTACG...ACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | CAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTATAACCGTAGGGATTaGGGCCCACGCCGTAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QALRARAQSQFQPGVPMDYNRRD*GPRRRQ Trigger: CTGCCTACGGCGTGGGCCTCAATCCCTACGGTTATA...GTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | CAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACGCCAGGCTGCGCTGCTaGTGTTCCAGGTTTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QALRARAQSQFQPGVPMDARLRC*CSRFRM Trigger: CATCCTAAACCTGGAACAGCAGCAGCGCAGCCTGGC...GTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | GTCAGGGAGCTGTTGAGGTGGGATCGGTCAGGGTCGCGCCACGCGGGTCCCTTCCAGGCTCGGATACCATaGAGCGTGGACACTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRELLRWDRSGSRHAGPFQARIP*SVDTPE Trigger: CTCGGGAGTGTCCACGCTGCATGGTATCCGAGCCTG...GAAGGGACCCGCGTGGCGCGACCCTGACCGATCCCACCTCAACAGCTCCCTGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | CCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTATAAATACGGGTGGGTaGGTGGGCGGGCGACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSSVPVPTGGAHGLSEGTINTGG*VGGRRR Trigger: TCGCCGTCGCCCGCCCACGCACCCACCCGTATTTAT...AGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | AAACGGGAGGTCTCTGCCCTCGGGGCAGTTCACACCCTGGTGAGGGAGACAGACGCTGCCCACGGCCCCTaGCAGCTTCCCTGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KREVSALGAVHTLVRETDAAHGP*QLPCMV Trigger: CACCATGCAGGGAAGCTGCCAGGGGCCGTGGGCAGC...GTCTGTCTCCCTCACCAGGGTGTGAACTGCCCCGAGGGCAGAGACCTCCCGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CCA 90 bp | GGAATGGGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAGGCTGGGGAACATGGTaGCAGCGCCAGTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMGGQISGPACPSSVPVPGWGTW*QRQSHS Trigger: GCTGTGAGACTGGCGCTGCCACCATGTTCCCCAGCC...TGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | ACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGAGCGCCCCGGCGGCAGCCAGGCTaGGCTGCTGCTGTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TVMVRDPRGGHCVLPGAPRRQPG*AAAVPG Trigger: ACCTGGAACAGCAGCAGCGCAGCCTGGCTGCCGCCG...GGGCGCTCCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | GGAATGGGCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAATCTCAGGCCCTGCGTaGCCGAGCTCAGTCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMGGQISGPACPSSVPVPISGPA*PSSVPV Trigger: AACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGAT...TGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGCCCATTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCAGCTGCCCACGGCCCCTaGCAGCTTCCCTGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTYGARPHSNGKGSSWRPAAHGP*QLPCMV Trigger: CACCATGCAGGGAAGCTGCCAGGGGCCGTGGGCAGC...TGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GAACAGAGAGGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGAGGCAGACGCACACTTaGCCGGTGAAGGCGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQRGRETLGKSGLTYGARRQTHT*PVKARG Trigger: GCCGCGCGCCTTCACCGGCCAAGTGTGCGTCTGCCT...CCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCCTCTCTGTTC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | ACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGAGCACGCTGGCCAGCTaGTCGCGTTCGGGGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLGKSGLTYGARPHSNGKSTLAS*SRSGAD Trigger: GTCGGCCCCCGAACGCGACCAGCTGGCCAGCGTGCT...CTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | AGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCAAACATAAATACGGGTaGGTGCGTGGGCGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: RSQALRARAQSQFQPGVPKHKYG*VRGRAT Trigger: CGTCGCCCGCCCACGCACCCACCCGTATTTATGTTT...GGGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | TGCGGCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATCCCGTCGGCCAGCTCTaGATGTGTCCGGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSLCQVHWEPPTRLTQHPVGQL*MCPGSR Trigger: CCTGCTGCCCGGACACATCCAGAGCTGGCCGACGGG...ATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CCA 90 bp | ACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGAGCGCCCCCTGGAGCGCCCAGCTaGCTGCGGCTCACTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVMVRDPRGGHCVLPGAPPGAPS*LRLTLP Trigger: TGGCAGAGTGAGCCGCAGCCAGCTGGGCGCTCCAGG...GGGCGCTCCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | CGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGGGCTGCGGCTCACTCTaGCAAGTGCACTGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPHSNGKGSSWRPLCPAWGCGSL*QVHWEP Trigger: TGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCAGCC...CCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | TGCGGCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATTCTCACAGCGCCAGGTaGGCGGCAGAAAGCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSLCQVHWEPPTRLTQHSHSAR*AAESGA Trigger: AGCGCCGCTTTCTGCCGCCCACCTGGCGCTGTGAGA...ATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CCA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCAGTCGCTGTAGGCACGTaGATAGAAGGCGGGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTYGARPHSNGKGSSWRPVAVGT*IEGGGG Trigger: GCCGCCCCCGCCTTCTATCCACGTGCCTACAGCGAC...TGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | AACATAAATACGGGTGGGTGCGTGGGCGGGCGACGGCGAGATAGCAAAGGCCCGAGGGAGCTGTTGAGGTaGGATCGGTCAGGGTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NINTGGCVGGRRRDSKGPRELLR*DRSGSR Trigger: GCGCGACCCTGACCGATCCCACCTCAACAGCTCCCT...CGGGCCTTTGCTATCTCGCCGTCGCCCGCCCACGCACCCACCCGTATTTATGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | ACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGCCTGGAGCGCCCAGCTaGCTGCGGCTCACTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGKSGLTYGARPHSNGKPGAPS*LRLTLP Trigger: TGGCAGAGTGAGCCGCAGCCAGCTGGGCGCTCCAGG...CTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | CCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCCATGGACTCTCGGAGGGCACTGGTTTAGGATGTCTTTaGCTGAGAAGGGCGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSSVPVPTGGAHGLSEGTGLGCL*LRRAWA Trigger: CGCCCACGCCCTTCTCAGTCAAAGACATCCTAAACC...AGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTTGGAACTGGGACTGAGCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR TCA 90 bp | ACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGTTGGTAAGAGCGGCTTaGCCTACGGAGCGCGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGKSGLTYGARPHSNGKLVRAA*PTERGR Trigger: GCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAA...CTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | CTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATTGGTAAGAGCGGCTTaGCCTACGGAGCGCGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSGLTYGARPHSNGKGLVRAA*PTERGR Trigger: GCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAA...TCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | TGCACTGGGAGCCACCGACACGTCTCACTCAGCATTTGTAGAAAGTCAGGCTGGGGCAGAAAGCGGCGCTaGCCACGGCCCCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTGSHRHVSLSICRKSGWGRKRR*PRPLAA Trigger: AGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTGCC...CCAGCCTGACTTTCTACAAATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR GCA 90 bp | ATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAACGGCGGCAGCCAGGCTaGGCTGCTGCTGTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IAATNSPVRKNKRAWDRKRRQPG*AAAVPG Trigger: ACCTGGAACAGCAGCAGCGCAGCCTGGCTGCCGCCG...TTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | GGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCCCTGCCGCTGCCGCTTaGACTTGTAGCGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSGLTYGARPHSNGKGSPAAAA*TCSAGS Trigger: AGAACCGGCGCTACAAGTGCAAGCGGCAGCGGCAGG...GGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | GGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAAAACGGGAGGTCTCTaGCCTCGGGGCAGTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GRETLGKSGLTYGARPHSKTGGL*PRGSSH Trigger: GTGTGAACTGCCCCGAGGGCAGAGACCTCCCGTTTT...ACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GCGGCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATTGGCTGGGGAACATGGTaGCAGCGCCAGTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAHSAKCTGSHRHVSLSIGWGTW*QRQSHS Trigger: GCTGTGAGACTGGCGCTGCCACCATGTTCCCCAGCC...AATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CCA 90 bp | ACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGAGCGCCCGGCTGGGGAACATGGTaGCAGCGCCAGTCTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVMVRDPRGGHCVLPGAPGWGTW*QRQSHS Trigger: GCTGTGAGACTGGCGCTGCCACCATGTTCCCCAGCC...GGGCGCTCCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GAACAGAGAGGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCAGGGCTGGGGAACATaGTGGCAGCGCCAGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQRGRETLGKSGLTYGARQGWGT*WQRQSH Trigger: GTGAGACTGGCGCTGCCACCATGTTCCCCAGCCCTG...CCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCCTCTCTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | ACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGTCGCTGTAGGCACGTaGATAGAAGGCGGGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGKSGLTYGARPHSNGKVAVGT*IEGGGG Trigger: GCCGCCCCCGCCTTCTATCCACGTGCCTACAGCGAC...CTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSGLTYGARPHSNGKGSSRVLG*VGVAVG Trigger: GCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGA...GGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | ACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGAGCGCCCTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVMVRDPRGGHCVLPGAPSRVLG*VGVAVG Trigger: GCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGA...GGGCGCTCCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CCA 90 bp | GTCTCCGCAGGAGTGAATGCAAAATCCAGGGGACTCAGGGTCATGTTGGGAGCCCCCTGGCTCGCGGAATaGGCGGCCAGATCTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGVNAKSRGLRVMLGAPWLAE*AARSQA Trigger: GGCCTGAGATCTGGCCGCCCATTCCGCGAGCCAGGG...GGCTCCCAACATGACCCTGAGTCCCCTGGATTTTGCATTCACTCCTGCGGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR TCA 90 bp | GGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTGGTTTAGGATGTCTTTaGCTGAGAAGGGCGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRETLGKSGLTYGARPHSGLGCL*LRRAWA Trigger: CGCCCACGCCCTTCTCAGTCAAAGACATCCTAAACC...ACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | ACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAAAGTTCCTAGGTCTGGCAGAAAGCGGCGCTaGCCACGGCCCCTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPCARTNARGTEKVPRSGRKRR*PRPLAA Trigger: AGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTGCC...AGACCTAGGAACTTTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | TGCGGCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATGCAGCCAGGCTGCGCTaGTGCTGTTCCAGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CGSLCQVHWEPPTRLTQHAARLR*CCSRFR Trigger: CCTAAACCTGGAACAGCAGCAGCGCAGCCTGGCTGC...ATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR GCA 90 bp | GGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCGCAGCCAGGCTGCGCTaGTGCTGTTCCAGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSGLTYGARPHSNGKGSAARLR*CCSRFR Trigger: CCTAAACCTGGAACAGCAGCAGCGCAGCCTGGCTGC...GGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCATCCAGAGTCTGGTCCTaGCGCTGCCGCTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTYGARPHSNGKGSSWRPSRVWS*RCRLHL Trigger: CAAGTGCAAGCGGCAGCGGCAGGACCAGACTCTGGA...TGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | GTCTCCGCAGGAGTGAATGCAAAATCCAGGGGACTCAGGGTCATGTTGGGAGCCCGGGGTAAGCGGCAGTaGAGCTGTAGCCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSAGVNAKSRGLRVMLGARGKRQ*SCSQGC Trigger: GCAGCCCTGGCTACAGCTGCACTGCCGCTTACCCCG...GGCTCCCAACATGACCCTGAGTCCCCTGGATTTTGCATTCACTCCTGCGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | ATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAATCTCACAGCGCCAGGTaGGCGGCAGAAAGCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IAATNSPVRKNKRAWDRKSHSAR*AAESGA Trigger: AGCGCCGCTTTCTGCCGCCCACCTGGCGCTGTGAGA...TTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTCTGCCAAGTGCACTaGGAGCCACCGACACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTYGARPHSNGKGSSWRPLCQVH*EPPTRL Trigger: GAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAG...TGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | CGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCACTGTGTCCTGCCTGGGGTTTAGGATGTCTTTaGCTGAGAAGGGCGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RPHSNGKGSSWRPLCPAWGLGCL*LRRAWA Trigger: CGCCCACGCCCTTCTCAGTCAAAGACATCCTAAACC...CCAGGCAGGACACAGTGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR TCA 90 bp | ATTGCACGCTGCATAATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCCGTAGGCCTCTGGCTTaGAGGCGGCCAGCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IARCIIAATNSPVRKNKRRRPLA*RRPACR Trigger: CCTGCATGCTGGCCGCCTTCAAGCCAGAGGCCTACG...GCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGATTATGCAGCGTGCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR TCA 90 bp | GTCTCCGCAGGAGTGAATGCAAAATCCAGGGGACTCAGGGTCATGTTGGGAGCCGGAATCCCGGGGCTCTaGACCGCATTCAAGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSAGVNAKSRGLRVMLGAGIPGL*TAFKSP Trigger: CGGGGACTTGAATGCGGTTCAGAGCCCCGGGATTCC...GGCTCCCAACATGACCCTGAGTCCCCTGGATTTTGCATTCACTCCTGCGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | CTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCAGAGTCTGGTCCTaGCGCTGCCGCTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSGLTYGARPHSNGKGSRVWS*RCRLHL Trigger: CAAGTGCAAGCGGCAGCGGCAGGACCAGACTCTGGA...TCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | AAGACACCAGGCTGCAGGATCACTCATTGCACGCTGCATAATCGCCGCCACAAAAGCTGTAGCCAGGGCTaGAGGCCGCGCCGCCGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTPGCRITHCTLHNRRHKSCSQG*RPRRRN Trigger: GTTACGGCGGCGCGGCCTGCAGCCCTGGCTACAGCT...TTTGTGGCGGCGATTATGCAGCGTGCAATGAGTGATCCTGCAGCCTGGTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | ATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAATGGACACTCCCGAGTTaGTCTGCGGAATCCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IAATNSPVRKNKRAWDRKWTLPS*SAESRG Trigger: GCCCCGGGATTCCGCAGAGCAACTCGGGAGTGTCCA...TTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | AACATAAATACGGGTGGGTGCGTGGGCGGGCGACGGCGAGATAGCAAAGGCCCGGGATACCATGCAGCGTaGACACTCCCGAGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NINTGGCVGGRRRDSKGPGYHAA*TLPSCS Trigger: AGAGCAACTCGGGAGTGTCCACGCTGCATGGTATCC...CGGGCCTTTGCTATCTCGCCGTCGCCCGCCCACGCACCCACCCGTATTTATGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | ACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGCCAGGCTGCGCTGCTaGTGTTCCAGGTTTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLGKSGLTYGARPHSNGKARLRC*CSRFRM Trigger: CATCCTAAACCTGGAACAGCAGCAGCGCAGCCTGGC...CTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | CCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAAAGTTCCTGCCGCTGCCGCTTaGACTTGTAGCGCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQTLPCARTNARGTEKVPAAAA*TCSAGS Trigger: AGAACCGGCGCTACAAGTGCAAGCGGCAGCGGCAGG...AACTTTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | ATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAATCCAGAGTCTGGTCCTaGCGCTGCCGCTTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: IAATNSPVRKNKRAWDRKSRVWS*RCRLHL Trigger: CAAGTGCAAGCGGCAGCGGCAGGACCAGACTCTGGA...TTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | CTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGAAAAACGGGAGGTCTCTaGCCTCGGGGCAGTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSGLTYGARPHSNGKGKTGGL*PRGSSH Trigger: GTGTGAACTGCCCCGAGGGCAGAGACCTCCCGTTTT...TCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | TGCACTGGGAGCCACCGACACGTCTCACTCAGCATTTGTAGAAAGTCAGGCTGGGGCTGCGGCTCACTCTaGCAAGTGCACTGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTGSHRHVSLSICRKSGWGCGSL*QVHWEP Trigger: TGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCAGCC...CCAGCCTGACTTTCTACAAATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CCA 90 bp | CAAACGCGCGTGGGACAGAAAAAGTTCCTAGGTCTCCGCAGGAGTGAATGCAAAAGGCAGACGCACACTTaGCCGGTGAAGGCGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTRVGQKKFLGLRRSECKRQTHT*PVKARG Trigger: GCCGCGCGCCTTCACCGGCCAAGTGTGCGTCTGCCT...TTTGCATTCACTCCTGCGGAGACCTAGGAACTTTTTCTGTCCCACGCGCGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | GCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATTTGTGGTAAGGGATCCTCGTaGAGGCCACTGTGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHSAKCTGSHRHVSLSICGKGSS*RPLCPA Trigger: GGCAGGACACAGTGGCCTCCACGAGGATCCCTTACC...ACAAATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR GCA 90 bp | ATAGGTAAAAACATAAATACGGGTGGGTGCGTGGGCGGGCGACGGCGAGATAGCGCAGCCAGGCTGCGCTaGTGCTGTTCCAGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGKNINTGGCVGGRRRDSAARLR*CCSRFR Trigger: CCTAAACCTGGAACAGCAGCAGCGCAGCCTGGCTGC...GCTATCTCGCCGTCGCCCGCCCACGCACCCACCCGTATTTATGTTTTTACCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | ATTGCACGCTGCATAATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCTCACGAAGTTGTTGTTaGCGGCGGCAGTGGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IARCIIAATNSPVRKNKRSRSCC*RRQWPA Trigger: AGCCGGCCACTGCCGCCGCCAACAACAACTTCGTGA...GCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGATTATGCAGCGTGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| 3UTR CAA 72 bp | GAACAGAGAGGCAGAGAGACGCTTGGTAAGAGCGGCTaGACCTACGGAGCGCGGCCGCACAGTAATGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQRGRETLGKSG*TYGARPHSNGK Trigger: CTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCCTCTCTGTTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR GCA 90 bp | GTCTCCGCAGGAGTGAATGCAAAATCCAGGGGACTCAGGGTCATGTTGGGAGCCCCACAAACTCTCCCGTaGGCAAGAACAAACGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSAGVNAKSRGLRVMLGAPQTLP*ARTNAR Trigger: ACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGG...GGCTCCCAACATGACCCTGAGTCCCCTGGATTTTGCATTCACTCCTGCGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR TCA 90 bp | ACGCGCGTGGGACAGAAAAAGTTCCTAGGTCTCCGCAGGAGTGAATGCAAAATCAGGTCTCCGCAGGAGTaGATGCAAAATCCAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGQKKFLGLRRSECKIRSPQE*MQNPGD Trigger: GTCCCCTGGATTTTGCATTCACTCCTGCGGAGACCT...GATTTTGCATTCACTCCTGCGGAGACCTAGGAACTTTTTCTGTCCCACGCGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | CCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAAAGTTTCACTCATTGCACGCTaGATAATCGCCGCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPQTLPCARTNARGTEKVSLIAR*IIAATN Trigger: GTTTGTGGCGGCGATTATGCAGCGTGCAATGAGTGA...AACTTTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | AAGACACCAGGCTGCAGGATCACTCATTGCACGCTGCATAATCGCCGCCACAAAGCTAAGACACCAGGCTaGAGGATCACTCATTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KTPGCRITHCTLHNRRHKAKTPG*RITHCT Trigger: CGTGCAATGAGTGATCCTGCAGCCTGGTGTCTTAGC...TTTGTGGCGGCGATTATGCAGCGTGCAATGAGTGATCCTGCAGCCTGGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CCA 90 bp | GCACTCTCTTTAATGGGAAGGGGATCGTCATTTCTTACAGCAATAGGTAAAAACAACCGGGGGTGCCCATaGACTCTCGGAGGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSLMGRGSSFLTAIGKNNRGCP*TLGGHS Trigger: GGAGTGCCCTCCGAGAGTCCATGGGCACCCCCGGTT...GTTTTTACCTATTGCTGTAAGAAATGACGATCCCCTTCCCATTAAAGAGAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR GCA 90 bp | ATGGGAAGGGGATCGTCATTTCTTACAGCAATAGGTAAAAACATAAATACGGGTTGCAGGATCACTCATTaGACGCTGCATAATCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: MGRGSSFLTAIGKNINTGCRITH*TLHNRR Trigger: GCGGCGATTATGCAGCGTGCAATGAGTGATCCTGCA...ACCCGTATTTATGTTTTTACCTATTGCTGTAAGAAATGACGATCCCCTTCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS TCA 90 bp | GGAGGCCCGGCGCAGCCGCCTCGGGCCCAGCGTAGGCCTCTGGCTTaGAGGCGGCCAGCATGCAGGAGGAGGGCGCCAGGGTCGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPAQPPRAQRRPLA*RRPACRRRAPGSPP Trigger: TGGAGGCGACCCTGGCGCCCTCCTCCTGCATGCTGGCCGCCTTCAAGCCAGAGGCCTACGCTGGGCCCGAGGCGGCTGCGCCGGGCCTCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS CCA 90 bp | CGGCAGAAAGCGGCGCTGCCCACGGCCCCTGGCAGCTTCCCTGCATaGTGCCGCCGCCCGCCCGCGCACCCGTCGGCCAGCTCTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RQKAALPTAPGSFPA*CRRPPAHPSASSGC Trigger: ACATCCAGAGCTGGCCGACGGGTGCGCGGGCGGGCGGCGGCACCATGCAGGGAAGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS CCA 90 bp | CTCTGGGAGGCCCGGCGCAGCCGCCTCGGGCCCAGCGTAGGCCTCTaGCTTGAAGGCGGCCAGCATGCAGGAGGAGGGCGCCAGGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LWEARRSRLGPSVGL*LEGGQHAGGGRQGR Trigger: GCGACCCTGGCGCCCTCCTCCTGCATGCTGGCCGCCTTCAAGCCAGAGGCCTACGCTGGGCCCGAGGCGGCTGCGCCGGGCCTCCCAGAG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS GCA 90 bp | CAGAAAGCGGCGCTGCCCACGGCCCCTGGCAGCTTCCCTGCATGGTaGCGCCGCCCGCCCGCGCACCCGTCGGCCAGCTCTGGATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QKAALPTAPGSFPAW*RRPPAHPSASSGCV Trigger: GACACATCCAGAGCTGGCCGACGGGTGCGCGGGCGGGCGGCGGCACCATGCAGGGAAGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000517440.1 |
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| CDS-3UTR CAA 90 bp | GCGGCTTCCTCCGCCGTCGCGCCCGGGGCCGCTCCGCGTTGTCCGCCTCTGTCTTCGGCTCTAGGGTCCTaGGCTGGGTCGGGGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AASSAVAPGAAPRCPPLSSALGS*AGSGSL Trigger: CAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGA...AGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS CCA 90 bp | CAGGGCTGGGGAACATGGTGGCAGCGCCAGTCTCACAGCGCCAGGTaGGCGGCAGAAAGCGGCGCTGCCCACGGCCCCTGGCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGWGTWWQRQSHSAR*AAESGAAHGPWQLP Trigger: GGGAAGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTGCCGCCCACCTGGCGCTGTGAGACTGGCGCTGCCACCATGTTCCCCAGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS GCA 90 bp | GGGAAGGCCCGGCGGGGTAAGCGGCAGTGCAGCTGTAGCCAGGGCTaGAGGCCGCGCCGCCGTAACCCGGATAGGCGGGGTAGGCGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GKARRGKRQCSCSQG*RPRRRNPDRRGRRY Trigger: ATAACGCCTACCCCGCCTATCCGGGTTACGGCGGCGCGGCCTGCAGCCCTGGCTACAGCTGCACTGCCGCTTACCCCGCCGGGCCTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS GCA 90 bp | AGGGTCGCGCCACGCGGGTCCCTTCCCTACCAGGCTCGGATACCATaGAGCGTGGACACTCCCGAGTTGCTCTGCGGAATCCCGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVAPRGSLPYQARIP*SVDTPELLCGIPGL Trigger: GAGCCCCGGGATTCCGCAGAGCAACTCGGGAGTGTCCACGCTGCATGGTATCCGAGCCTGGTAGGGAAGGGACCCGCGTGGCGCGACCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | GCGGCCAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGTTCACGAAGTTGTTGTaGGCGGCGGCAGTGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AARSQALRARAQSQFQPGFTKLL*AAAVAG Trigger: GCCGGCCACTGCCGCCGCCAACAACAACTTCGTGAA...CCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTGGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS TCA 90 bp | CGCCGTAACCCGGATAGGCGGGGTAGGCGTTATAACCGTAGGGATTaGGGCCCACGCCGTAGGCAGGCGCGTAGGGCGCCGAGTCCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: RRNPDRRGRRYNRRD*GPRRRQARRAPSPL Trigger: TAGGGGACTCGGCGCCCTACGCGCCTGCCTACGGCGTGGGCCTCAATCCCTACGGTTATAACGCCTACCCCGCCTATCCGGGTTACGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | AAACGGGAGGTCTCTGCCCTCGGGGCAGTTCACACCCTGGTGAGGGAGACAGACTCGGCTCTAGGGTCCTaGGCTGGGTCGGGGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KREVSALGAVHTLVRETDSALGS*AGSGSL Trigger: CAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGA...GTCTGTCTCCCTCACCAGGGTGTGAACTGCCCCGAGGGCAGAGACCTCCCGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CAA 90 bp | GGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCAAGGCAGACGCACACTaGGCCGGTGAAGGCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSGLTYGARPHSNGKGSKADAH*AGEGAR Trigger: CCGCGCGCCTTCACCGGCCAAGTGTGCGTCTGCCTT...GGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CAA 90 bp | CAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCAAGTTCACGAAGTTGTaGTTGGCGGCGGCAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QISGPACPSSVPVPTGGAKFTKL*LAAAVA Trigger: GGCCACTGCCGCCGCCAACAACAACTTCGTGAACTT...GGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | TGCGGCTCACTCTGCCAAGTGCACTGGGAGCCACCGACACGTCTCACTCAGCATCTTGGTAAGAGCGGCTaGACCTACGGAGCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CGSLCQVHWEPPTRLTQHLGKSG*TYGARP Trigger: CGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAG...ATGCTGAGTGAGACGTGTCGGTGGCTCCCAGTGCACTTGGCAGAGTGAGCCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS-3UTR CAA 90 bp | CAGATCTCAGGCCCTGCGTGCCCGAGCTCAGTCCCAGTTCCAACCGGGGGTGCCAGGTTTAGGATGTCTTaGACTGAGAAGGGCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QISGPACPSSVPVPTGGARFRMS*TEKGVG Trigger: GCCCACGCCCTTCTCAGTCAAAGACATCCTAAACCT...GGCACCCCCGGTTGGAACTGGGACTGAGCTCGGGCACGCAGGGCCTGAGATCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | ATCGCCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAATCGGCTCTAGGGTCCTaGGCTGGGTCGGGGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IAATNSPVRKNKRAWDRKSALGS*AGSGSL Trigger: CAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGA...TTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGGCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | CTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGACTTGGTAAGAGCGGCTaGACCTACGGAGCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGKSGLTYGARPHSNGKGLGKSG*TYGARP Trigger: CGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAG...TCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS GCA 90 bp | TTCCCTACCAGGCTCGGATACCATGCAGCGTGGACACTCCCGAGTTaGTCTGCGGAATCCCGGGGCTCTGAACCGCATTCAAGTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FPTRLGYHAAWTLPS*SAESRGSEPHSSPR Trigger: TCGGGGACTTGAATGCGGTTCAGAGCCCCGGGATTCCGCAGAGCAACTCGGGAGTGTCCACGCTGCATGGTATCCGAGCCTGGTAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS TCA 90 bp | TGCAGCGTGGACACTCCCGAGTTGCTCTGCGGAATCCCGGGGCTCTaGACCGCATTCAAGTCCCCGACGCCGAAGTTCACGAAGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSVDTPELLCGIPGL*TAFKSPTPKFTKLL Trigger: CAACAACTTCGTGAACTTCGGCGTCGGGGACTTGAATGCGGTTCAGAGCCCCGGGATTCCGCAGAGCAACTCGGGAGTGTCCACGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | GGCAGAGAGACGCTTGGTAAGAGCGGCTTGACCTACGGAGCGCGGCCGCACAGTAGGTTTAGGATGTCTTaGACTGAGAAGGGCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRETLGKSGLTYGARPHSRFRMS*TEKGVG Trigger: GCCCACGCCCTTCTCAGTCAAAGACATCCTAAACCT...ACTGTGCGGCCGCGCTCCGTAGGTCAAGCCGCTCTTACCAAGCGTCTCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
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| CDS-3UTR CAA 90 bp | ACGCGCGTGGGACAGAAAAAGTTCCTAGGTCTCCGCAGGAGTGAATGCAAAATCAAGGCAGACGCACACTaGGCCGGTGAAGGCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRVGQKKFLGLRRSECKIKADAH*AGEGAR Trigger: CCGCGCGCCTTCACCGGCCAAGTGTGCGTCTGCCTT...GATTTTGCATTCACTCCTGCGGAGACCTAGGAACTTTTTCTGTCCCACGCGCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
||
| CDS-3UTR CAA 90 bp | TTGACCTACGGAGCGCGGCCGCACAGTAATGGTAAGGGATCCTCGTGGAGGCCAAGGTTTAGGATGTCTTaGACTGAGAAGGGCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTYGARPHSNGKGSSWRPRFRMS*TEKGVG Trigger: GCCCACGCCCTTCTCAGTCAAAGACATCCTAAACCT...TGGCCTCCACGAGGATCCCTTACCATTACTGTGCGGCCGCGCTCCGTAGGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424406.2 ENST00000521848.1 |
||
| CDS-3UTR CAA 90 bp | CAAACGCGCGTGGGACAGAAAAAGTTCCTAGGTCTCCGCAGGAGTGAATGCAAAGTGGACACTCCCGAGTaGCTCTGCGGAATCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTRVGQKKFLGLRRSECKVDTPE*LCGIPG Trigger: CCCCGGGATTCCGCAGAGCAACTCGGGAGTGTCCAC...TTTGCATTCACTCCTGCGGAGACCTAGGAACTTTTTCTGTCCCACGCGCGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | CCGCCACAAACTCTCCCGTGCGCAAGAACAAACGCGCGTGGGACAGAAAAAGTTCCGAAGTTCACGAAGTaGTTGTTGGCGGCGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PPQTLPCARTNARGTEKVPKFTK*LLAAAV Trigger: CACTGCCGCCGCCAACAACAACTTCGTGAACTTCGG...AACTTTTTCTGTCCCACGCGCGTTTGTTCTTGCGCACGGGAGAGTTTGTGGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS-3UTR CAA 90 bp | GCACTCTCTTTAATGGGAAGGGGATCGTCATTTCTTACAGCAATAGGTAAAAACAGAGTCAGGGAGCTGTaGAGGTGGGATCGGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ALSLMGRGSSFLTAIGKNRVREL*RWDRSG Trigger: CCCTGACCGATCCCACCTCAACAGCTCCCTGACTCT...GTTTTTACCTATTGCTGTAAGAAATGACGATCCCCTTCCCATTAAAGAGAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS CCA 72 bp | GCCCGGCGCAGCCGCCTCGGGCCCAGCGTAGGCCTCTaGCTTGAAGGCGGCCAGCATGCAGGAGGAGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: ARRSRLGPSVGL*LEGGQHAGGGR Trigger: GCGCCCTCCTCCTGCATGCTGGCCGCCTTCAAGCCAGAGGCCTACGCTGGGCCCGAGGCGGCTGCGCCGGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS GCA 72 bp | CGGCGGGGTAAGCGGCAGTGCAGCTGTAGCCAGGGCTaGAGGCCGCGCCGCCGTAACCCGGATAGGCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RRGKRQCSCSQG*RPRRRNPDRRG Trigger: ACCCCGCCTATCCGGGTTACGGCGGCGCGGCCTGCAGCCCTGGCTACAGCTGCACTGCCGCTTACCCCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS GCA 72 bp | GTCTCACAGCGCCAGGTGGGCGGCAGAAAGCGGCGCTaGCCACGGCCCCTGGCAGCTTCCCTGCATGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VSQRQVGGRKRR*PRPLAASLHGA Trigger: GGCACCATGCAGGGAAGCTGCCAGGGGCCGTGGGCAGCGCCGCTTTCTGCCGCCCACCTGGCGCTGTGAGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS CCA 72 bp | AGGGTCCTTGGCTGGGTCGGGGTCGCTGTAGGCACGTaGATAGAAGGCGGGGGCGGCGGGAAAGGCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: RVLGWVGVAVGT*IEGGGGGKGRR Trigger: GCGTCTGCCTTTCCCGCCGCCCCCGCCTTCTATCCACGTGCCTACAGCGACCCCGACCCAGCCAAGGACCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS TCA 72 bp | CCGGATAGGCGGGGTAGGCGTTATAACCGTAGGGATTaGGGCCCACGCCGTAGGCAGGCGCGTAGGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: PDRRGRRYNRRD*GPRRRQARRAP Trigger: CGGCGCCCTACGCGCCTGCCTACGGCGTGGGCCTCAATCCCTACGGTTATAACGCCTACCCCGCCTATCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS CAA 72 bp | ACCGCATTCAAGTCCCCGACGCCGAAGTTCACGAAGTaGTTGTTGGCGGCGGCAGTGGCCGGCTGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TAFKSPTPKFTK*LLAAAVAGCAG Trigger: CCCAGCGCAGCCGGCCACTGCCGCCGCCAACAACAACTTCGTGAACTTCGGCGTCGGGGACTTGAATGCGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS GCA 72 bp | CCACGCGGGTCCCTTCCCTACCAGGCTCGGATACCATaGAGCGTGGACACTCCCGAGTTGCTCTGCGGAATC | + |
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Preference number: 6 (lower is better) Translates to: PRGSLPYQARIP*SVDTPELLCGI Trigger: GATTCCGCAGAGCAACTCGGGAGTGTCCACGCTGCATGGTATCCGAGCCTGGTAGGGAAGGGACCCGCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS TCA 72 bp | GACACTCCCGAGTTGCTCTGCGGAATCCCGGGGCTCTaGACCGCATTCAAGTCCCCGACGCCGAAGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: DTPELLCGIPGL*TAFKSPTPKFT Trigger: CGTGAACTTCGGCGTCGGGGACTTGAATGCGGTTCAGAGCCCCGGGATTCCGCAGAGCAACTCGGGAGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS GCA 72 bp | AGGCTCGGATACCATGCAGCGTGGACACTCCCGAGTTaGTCTGCGGAATCCCGGGGCTCTGAACCGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: RLGYHAAWTLPS*SAESRGSEPHS Trigger: TGAATGCGGTTCAGAGCCCCGGGATTCCGCAGAGCAACTCGGGAGTGTCCACGCTGCATGGTATCCGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS GCA 72 bp | TTGTCCGCCTCTGTCTTCTCCAGCTCCACCGCCTTCTaGAGCGCGCACAGCTCTTTCTTTTCGGCTCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSASVFSSSTAF*SAHSSFFSALG Trigger: CCCTAGAGCCGAAAAGAAAGAGCTGTGCGCGCTGCAGAAGGCGGTGGAGCTGGAGAAGACAGAGGCGGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS CCA 72 bp | GCACAGCTCTTTCTTTTCGGCTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGCACGTGGATAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: AQLFLFGSRVLG*VGVAVGTWIEG Trigger: GCCTTCTATCCACGTGCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGAAAAGAAAGAGCTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329198.5 |
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| CDS CAA 72 bp | AGGCTGCGCTGCTGCTGTTCCAGGTTTAGGATGTCTTaGACTGAGAAGGGCGTGGGCGTGAGAGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLRCCCSRFRMS*TEKGVGVRAGL Trigger: CAGCCCTGCTCTCACGCCCACGCCCTTCTCAGTCAAAGACATCCTAAACCTGGAACAGCAGCAGCGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000329198.5 ENST00000424406.2 ENST00000517440.1 ENST00000521848.1 |
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| CDS CCA 72 bp | TTCACACCCTTTCTTTTCGGCTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGCACGTGGATAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FTPFLFGSRVLG*VGVAVGTWIEG Trigger: GCCTTCTATCCACGTGCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGAAAAGAAAGGGTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521848.1 |
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| CDS CCA 72 bp | ATTTCAGGCTTTCTTTTCGGCTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGCACGTGGATAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ISGFLFGSRVLG*VGVAVGTWIEG Trigger: GCCTTCTATCCACGTGCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGAAAAGAAAGCCTGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424406.2 |
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| CDS CCA 72 bp | AAGTTGTGCTTTCTTTTCGGCTCTAGGGTCCTTGGCTaGGTCGGGGTCGCTGTAGGCACGTGGATAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: KLCFLFGSRVLG*VGVAVGTWIEG Trigger: GCCTTCTATCCACGTGCCTACAGCGACCCCGACCCAGCCAAGGACCCTAGAGCCGAAAAGAAAGCACAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517440.1 |
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