RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKPD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000179846

Ensembl transcript IDs: ENST00000317951.6, ENST00000589776.1

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGATGGGGCAGGCCCTGTGGCAGGACGGGGCAGGCCTGGTCCCTaGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCT +
Preference number: 1 (lower is better)
Translates to: QDGAGPVAGRGRPGP*SDQDAESNSGLSTP
Trigger: AGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCAGGCCTGCCCCGTCCTGCCACAGGGCCTGCCCCATCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp TGTGAGGTCAGTGACCCAGTCCCATGGCCTGAGGGTGTGTGCCTTTaGAGAGCTCTCAGGTTCCTCGGGGGCTGTCCCCTCCACCAGCCT +
Preference number: 1 (lower is better)
Translates to: CEVSDPVPWPEGVCL*RALRFLGGCPLHQP
Trigger: AGGCTGGTGGAGGGGACAGCCCCCGAGGAACCTGAGAGCTCTGCAAAGGCACACACCCTCAGGCCATGGGACTGGGTCACTGACCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp CCGCAGCCTCTCCTGCCACAGAGATGCCAGATGAGGAGGCCAGCATaGTGCAGAGGAGTAAGTGGGCTTAGCAGGATGGGGCAGGCCCTG +
Preference number: 1 (lower is better)
Translates to: PQPLLPQRCQMRRPA*CRGVSGLSRMGQAL
Trigger: CAGGGCCTGCCCCATCCTGCTAAGCCCACTTACTCCTCTGCACCATGCTGGCCTCCTCATCTGGCATCTCTGTGGCAGGAGAGGCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 90 bp GGACAAGGACTGGGATTCCCTGAGGCCTGGGCGCTCCATGTTGCCTaGGTCAACCTGGCCCATCCACCTGTCATCTCTGCAGCCTCACCC +
Preference number: 1 (lower is better)
Translates to: GQGLGFPEAWALHVA*VNLAHPPVISAASP
Trigger: GGGTGAGGCTGCAGAGATGACAGGTGGATGGGCCAGGTTGACTCAGGCAACATGGAGCGCCCAGGCCTCAGGGAATCCCAGTCCTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp CAGCCTCTCCTGCCACAGAGATGCCAGATGAGGAGGCCAGCATGGTaGAGAGGAGTAAGTGGGCTTAGCAGGATGGGGCAGGCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: QPLLPQRCQMRRPAW*RGVSGLSRMGQALW
Trigger: CCACAGGGCCTGCCCCATCCTGCTAAGCCCACTTACTCCTCTGCACCATGCTGGCCTCCTCATCTGGCATCTCTGTGGCAGGAGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp TCTGTGCCTGCTCTCATGCTGGCACCGGCTTGTGGCCGCACTCCTTaGAAGCTATGTCCACGGCTCTGGCTCAGGTTCACCTGGGGGTGT +
Preference number: 1 (lower is better)
Translates to: SVPALMLAPACGRTP*KLCPRLWLRFTWGC
Trigger: ACACCCCCAGGTGAACCTGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp CTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTaGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LRSHTLSLIPGYVQC*PLWPLPAHTWNWAR
Trigger: CCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp CCCTGTGGCAGGACGGGGCAGGCCTGGTCCCTGGTCAGATCAGGATaGGGAGAGCAACTCCGGGCTCTCAACACCTCCATTTATTGCATG +
Preference number: 1 (lower is better)
Translates to: PCGRTGQAWSLVRSG*GEQLRALNTSIYCM
Trigger: CATGCAATAAATGGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCAGGCCTGCCCCGTCCTGCCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp AAGAACTGTGAGGTCAGTGACCCAGTCCCATGGCCTGAGGGTGTGTaGCTTTGCAGAGCTCTCAGGTTCCTCGGGGGCTGTCCCCTCCAC +
Preference number: 1 (lower is better)
Translates to: KNCEVSDPVPWPEGV*LCRALRFLGGCPLH
Trigger: GTGGAGGGGACAGCCCCCGAGGAACCTGAGAGCTCTGCAAAGGCACACACCCTCAGGCCATGGGACTGGGTCACTGACCTCACAGTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp CCTCACTGGTCCTTCTGTGCCTGCTCTCATGCTGGCACCGGCTTGTaGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAGGTT +
Preference number: 1 (lower is better)
Translates to: PHWSFCACSHAGTGL*PHSLEAMSTALAQV
Trigger: AACCTGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAGAAGGACCAGTGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 90 bp CCCAGGGAAGATCATAGAGGGCTCCCACTGACCTGCATGCACCTGTaGCAATTGCTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCT +
Preference number: 1 (lower is better)
Translates to: PREDHRGLPLTCMHL*QLLWPENSGAAARP
Trigger: AGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAGCAATTGTCACAGGTGCATGCAGGTCAGTGGGAGCCCTCTATGATCTTCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 90 bp ACCTCTGCTTGCCCAGCCCCAGGGAAGATCATAGAGGGCTCCCACTaGCCTGCATGCACCTGTGACAATTGCTGTGGCCAGAGAACTCCG +
Preference number: 1 (lower is better)
Translates to: TSACPAPGKIIEGSH*PACTCDNCCGQRTP
Trigger: CGGAGTTCTCTGGCCACAGCAATTGTCACAGGTGCATGCAGGTCAGTGGGAGCCCTCTATGATCTTCCCTGGGGCTGGGCAAGCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp AGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTaGTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGG +
Preference number: 1 (lower is better)
Translates to: SYSWTQAPLKLLGLC*SPGPQGSRIKWADG
Trigger: CCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp GGCTTCACCATGTTGGCCAGGCTGATGCAGCTTCTTACTGAGGCATaGGGGGCTTCAGTCCTGCCCTCACCTCCAGCCAAGTCTACACGT +
Preference number: 1 (lower is better)
Translates to: GFTMLARLMQLLTEA*GASVLPSPPAKSTR
Trigger: ACGTGTAGACTTGGCTGGAGGTGAGGGCAGGACTGAAGCCCCCCATGCCTCAGTAAGAAGCTGCATCAGCCTGGCCAACATGGTGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 90 bp TTCCCTGTCCTCATCAGGGGGCTGATGCAGTGGCTTCAGTGTCAGTaGCTAACCAGTGGCCCTGGAGTGACTCGTAAGGCAGGTACCCTG +
Preference number: 1 (lower is better)
Translates to: FPVLIRGLMQWLQCQ*LTSGPGVTRKAGTL
Trigger: CAGGGTACCTGCCTTACGAGTCACTCCAGGGCCACTGGTTAGTCACTGACACTGAAGCCACTGCATCAGCCCCCTGATGAGGACAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp GCTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATaGCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCAGTC +
Preference number: 1 (lower is better)
Translates to: AVARELRCCSQTWML*PALELKNCEVSDPV
Trigger: GACTGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp ATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCAGCTGGCTGAGGTaGCAGCGAGGTCTAACCCATTACGTTGAGAATGGAGCCACCCTA +
Preference number: 1 (lower is better)
Translates to: ICLGEVSATHSSWLR*QRGLTHYVENGATL
Trigger: TAGGGTGGCTCCATTCTCAACGTAATGGGTTAGACCTCGCTGGCACCTCAGCCAGCTGGAGTGGGTGGCACTAACCTCCCCCAGACAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp GTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTaGTTGCCCAGCCCCAGGGAAGATCATAGAGGGCTCCCACTGACC +
Preference number: 1 (lower is better)
Translates to: VSYQLSQSRNGKQHL*LPSPREDHRGLPLT
Trigger: GGTCAGTGGGAGCCCTCTATGATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp TGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCAGCTaGCTGAGGTGCCAGCGAGGTCTAACCCATTACGTTGAGAATGGA +
Preference number: 1 (lower is better)
Translates to: WTVICLGEVSATHSS*LRCQRGLTHYVENG
Trigger: TCCATTCTCAACGTAATGGGTTAGACCTCGCTGGCACCTCAGCCAGCTGGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 90 bp ATGTGGATGTTCAGAGTGGCAGGCAGCTCTTCACCAAGTTATTCCTaGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: MWMFRVAGSSSPSYS*TQAPLKLLGLCCSP
Trigger: TGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGCCACTCTGAACATCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 90 bp AGCAACTCCGGGCTCTCAACACCTCCATTTATTGCATGTATACCCTaGCTTCCTCACTGGTCCTTCTGTGCCTGCTCTCATGCTGGCACC +
Preference number: 1 (lower is better)
Translates to: SNSGLSTPPFIACIP*LPHWSFCACSHAGT
Trigger: GGTGCCAGCATGAGAGCAGGCACAGAAGGACCAGTGAGGAAGTCAGGGTATACATGCAATAAATGGAGGTGTTGAGAGCCCGGAGTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 90 bp TCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCATTTATTaGATGTATACCCTGACTTCCTCACTGGTCCTTCTGTGCCTGCTC +
Preference number: 1 (lower is better)
Translates to: SGCGEQLRALNTSIY*MYTLTSSLVLLCLL
Trigger: GAGCAGGCACAGAAGGACCAGTGAGGAAGTCAGGGTATACATGCAATAAATGGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 90 bp GTCCCGTGGCTTTACACAGGTGCAAGTTCTCATAGCAGCTCCACGTaGAGATACAGTGACCAACAGTTTGGCCACAGCTTGTACCACGTA +
Preference number: 1 (lower is better)
Translates to: VPWLYTGASSHSSST*RYSDQQFGHSLYHV
Trigger: TACGTGGTACAAGCTGTGGCCAAACTGTTGGTCACTGTATCTTCACGTGGAGCTGCTATGAGAACTTGCACCTGTGTAAAGCCACGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp AGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTaGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCACCCC +
Preference number: 2 (lower is better)
Translates to: SHTLSLIPGYVQCWP*WPLPAHTWNWARHP
Trigger: GGGGTGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTGGCTCATTCGGACCCTaGGTTGCGGCCCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: LWPENSGAAARPGCYAQPGSFGP*VAAPVQ
Trigger: CTGGACTGGGGCCGCAACCCAGGGTCCGAATGAGCC...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGGCTGGCACCGGCTTGTaGCCGCACTCCTTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGAGTGL*PHSLEA
Trigger: AGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGC...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTCTGCCGGCACACACTTaGAACTGGGCCAGGCACCCC +
Preference number: 2 (lower is better)
Translates to: LWPENSGAAARPGCYAQPLPAHT*NWARHP
Trigger: GGGGTGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAG...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACAGGACTGGGATTCCCTaGGGCCTGGGCGCTCCATGT +
Preference number: 2 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHRTGIP*GLGAPC
Trigger: ACATGGAGCGCCCAGGCCTCAGGGAATCCCAGTCCT...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp TTCTGTGCCTGCTCTCATGCTGGCACCGGCTTGTGGCCGCACTCCTaGGAAGCTATGTCCACGGCTCTGGCTCAGGTTCACCTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: FCACSHAGTGLWPHS*EAMSTALAQVHLGV
Trigger: CACCCCCAGGTGAACCTGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp GCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTaGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: AQKPHPQPHPRVCSV*ALVAPAGTHLELGQ
Trigger: CTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCACACAGAGATGCCAGATaGGGAGGCCAGCATGGTGCA +
Preference number: 2 (lower is better)
Translates to: SVLALVAPAGTHLELGQAHRDAR*GGQHGA
Trigger: TGCACCATGCTGGCCTCCTCATCTGGCATCTCTGTG...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCCCAGTGGCCCTGGAGTaGCTCGTAAGGCAGGTACCC +
Preference number: 2 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAPVALE*LVRQVP
Trigger: GGGTACCTGCCTTACGAGTCACTCCAGGGCCACTGG...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTATTCGGACCCTGGGTTaGGGCCCCAGTCCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAIRTLG*GPSPAP
Trigger: GGGGGCTGGACTGGGGCCGCAACCCAGGGTCCGAAT...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCCTGTGCCTGCTCTCATaGTGGCACCGGCTTGTGGCC +
Preference number: 2 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSLCLLS*WHRLVA
Trigger: GGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAG...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCATCCCATCTGGGCAGATaGAGGAACCCTTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SVLALVAPAGTHLELGQASHLGR*RNPCLL
Trigger: CAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGA...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCTGCCTGCTCTCATGCTaGCACCGGCTTGTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSCLLSC*HRLVAA
Trigger: TGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCA...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACTGGCTGGCTGTGGCTTaGGCCCTGTATGTCCCCATC +
Preference number: 2 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHWLAVA*ALYVPI
Trigger: GATGGGGACATACAGGGCCCAAGCCACAGCCAGCCA...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp CTTCCTCACTGGTCCTTCTGTGCCTGCTCTCATGCTGGCACCGGCTaGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LPHWSFCACSHAGTG*WPHSLEAMSTALAQ
Trigger: CTGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAGAAGGACCAGTGAGGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCGCGCTCCATGTTGCCTaGGTCAACCTGGCCCATCCA +
Preference number: 2 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAALHVA*VNLAHP
Trigger: TGGATGGGCCAGGTTGACTCAGGCAACATGGAGCGC...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGTCACTGGTCCTTCTGTaGCTGCTCTCATGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGSLVLL*LLSCWH
Trigger: GTGCCAGCATGAGAGCAGGCACAGAAGGACCAGTGA...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGTGCTCCCTGACTCATTaGTGGGAAAGGCGCACAGGT +
Preference number: 2 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGCSLTH*WERRTG
Trigger: ACCTGTGCGCCTTTCCCAGCAATGAGTCAGGGAGCA...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAAGTTCACCTGGGGGTGTaGGCCTCACAGGGCTCATTC +
Preference number: 2 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQVHLGV*ASQGSF
Trigger: GAATGAGCCCTGTGAGGCCCACACCCCCAGGTGAAC...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCCTATGTCCACGGCTCTaGCTCAGGTTCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSLCPRL*LRFTWG
Trigger: CCCCCAGGTGAACCTGAGCCAGAGCCGTGGACATAG...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGTGGGCTTAGCAGGATaGGGCAGGCCCTGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: LFLDPGPFEALRALLLPRVGLAG*GRPCGR
Trigger: CCTGCCACAGGGCCTGCCCCATCCTGCTAAGCCCAC...CCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGTCCCTGACTCATTGCTaGGAAAGGCGCACAGGTCAG +
Preference number: 2 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGSLTHC*ERRTGQ
Trigger: CTGACCTGTGCGCCTTTCCCAGCAATGAGTCAGGGA...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAACCTGCATGCACCTGTaGCAATTGCTGTGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LDPGPFEALRALLLPRASTCMHL*QLLWPE
Trigger: CTCTGGCCACAGCAATTGTCACAGGTGCATGCAGGT...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCGGCAGGCCTGGTCCCTaGTCAGATCAGGATGCGGAG +
Preference number: 2 (lower is better)
Translates to: HYVENGATLGVEQLAEVTGRPGP*SDQDAE
Trigger: CTCCGCATCCTGATCTGACCAGGGACCAGGCCTGCC...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCTGGGCGCTCCATGTTaGCTGAGTCAACCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: ETDLTVSRGPILLPLRPALGAPC*LSQPGP
Trigger: TGGGCCAGGTTGACTCAGGCAACATGGAGCGCCCAG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGTGGCCTGAGGGTGTGTaGCTTTGCAGAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGWPEGV*LCRALR
Trigger: CCTGAGAGCTCTGCAAAGGCACACACCCTCAGGCCA...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACTTGCCTGAGTCAACCTaGCCCATCCACCTGTCATCT +
Preference number: 2 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHLPEST*PIHLSS
Trigger: AGATGACAGGTGGATGGGCCAGGTTGACTCAGGCAA...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGGGTATGTTCAGTGTTaGCCCTTGTGGCCCCTGCCG +
Preference number: 2 (lower is better)
Translates to: LFLDPGPFEALRALLLPRGYVQC*PLWPLP
Trigger: CGGCAGGGGCCACAAGGGCCAACACTGAACATACCC...CCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp TCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTaGCCCAGCCCCAGGGAAGATCATAGAGGGCTCCCACTGACCTGC +
Preference number: 2 (lower is better)
Translates to: SYQLSQSRNGKQHLC*PSPREDHRGLPLTC
Trigger: GCAGGTCAGTGGGAGCCCTCTATGATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp AAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTaGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: KLFLDPGPFEALRAL*LPRASRIPDQVGRW
Trigger: CCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCTCCAGCTGGCTGAGGTaGCAGCGAGGTCTAACCCAT +
Preference number: 2 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPSSWLR*QRGLTH
Trigger: ATGGGTTAGACCTCGCTGGCACCTCAGCCAGCTGGA...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGCCCTTGTGGCCCCTaGCGGCACACACTTGGAACT +
Preference number: 2 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNGPCGP*RHTLGT
Trigger: AGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCC...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCGGACAGTTATTTGTCTaGGGGAGGTTAGTGCCACCC +
Preference number: 2 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAGQLFV*GRLVPP
Trigger: GGGTGGCACTAACCTCCCCCAGACAAATAACTGTCC...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATCAGTGTTGGCCCTTGTaGCCCCTGCCGGCACACACT +
Preference number: 2 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNQCWPL*PLPAHT
Trigger: AGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTG...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp AGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTaGGAACTAAAGAACTGTGAGGTCAGTGACCCAGTCCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: RELRCCSQTWMLCPA*ELKNCEVSDPVPWP
Trigger: AGGCCATGGGACTGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGTGGAGCAGCTTGCTaGGGTCACCGAGGTCATCCT +
Preference number: 2 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLGGAAC*GHRGHP
Trigger: AGGATGACCTCGGTGACCTCAGCAAGCTGCTCCACC...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCTGGCTTCAGTGTCAGTaGCTAACCAGTGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPWLQCQ*LTSGPG
Trigger: TCCAGGGCCACTGGTTAGTCACTGACACTGAAGCCA...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTATGGTCCTTCTGTGCCTaGTCTCATGCTGGCACCGGC +
Preference number: 2 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLWSFCA*SHAGTG
Trigger: GCCGGTGCCAGCATGAGAGCAGGCACAGAAGGACCA...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp TTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGGTCATCCTCAGAAATaGCAGCCCCTGCCCTACTCA +
Preference number: 2 (lower is better)
Translates to: LFLDPGPFEALRALLLPRGHPQK*QPLPYS
Trigger: TGAGTAGGGCAGGGGCTGGCATTTCTGAGGATGACC...CCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGCCAGAGAACTCCGGTaGTGCAGCCAGACCTGGATG +
Preference number: 2 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLARELR*CSQTWM
Trigger: CATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGC...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGCCCTATTCTCCCATCTaGGCAGATGGAGGAACCCTT +
Preference number: 2 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGPYSPI*ADGGTL
Trigger: AAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGG...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAATGTGGCCGCACTCCTTaGAAGCTATGTCCACGGCTC +
Preference number: 2 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKCGRTP*KLCPRL
Trigger: GAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACA...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATAGAAATGCCAGCCCCTaGCCTACTCACAGAGGGGCA +
Preference number: 2 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNRNASP*PTHRGA
Trigger: TGCCCCTCTGTGAGTAGGGCAGGGGCTGGCATTTCT...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTATTGCATGTATACCCTaGCTTCCTCACTGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: GSEATPSASSQGMFSVGPIACIP*LPHWSF
Trigger: GAAGGACCAGTGAGGAAGTCAGGGTATACATGCAAT...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTACCATGTTGGCCAGGCTaGTGCAGCTTCTTACTGAGG +
Preference number: 2 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLPCWPG*CSFLLR
Trigger: CCTCAGTAAGAAGCTGCATCAGCCTGGCCAACATGG...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCAAACACCTCCATTTATTaGATGTATACCCTGACTTCC +
Preference number: 2 (lower is better)
Translates to: SVLALVAPAGTHLELGQANTSIY*MYTLTS
Trigger: GGAAGTCAGGGTATACATGCAATAAATGGAGGTGTT...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR GCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCGAGGGTGTGTGCCTTTaGAGAGCTCTCAGGTTCCTC +
Preference number: 2 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACEGVCL*RALRFL
Trigger: GAGGAACCTGAGAGCTCTGCAAAGGCACACACCCTC...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 90 bp ATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCATTTATaGCATGTATACCCTGACTTCCTCACTGGTCCTTCTGTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: IRMRRATPGSQHLHL*HVYPDFLTGPSVPA
Trigger: AGCAGGCACAGAAGGACCAGTGAGGAAGTCAGGGTATACATGCAATAAATGGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR TCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATTCTAACCCATTACGTTaGGAATGGAGCCACCCTAGG +
Preference number: 2 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNSNPLR*EWSHPR
Trigger: CCTAGGGTGGCTCCATTCTCAACGTAATGGGTTAGA...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAAGGACGGGGCAGGCCTaGTCCCTGGTCAGATCAGGA +
Preference number: 2 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQRTGQA*SLVRSG
Trigger: TCCTGATCTGACCAGGGACCAGGCCTGCCCCGTCCT...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp CCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATaGAGGAACCCTTGCCTCCTGCTGCCCGCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: PQSSPLFSHLGR*RNPCLLLPAKS
Trigger: GGACTTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp TCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTaGCGGCACACACTTGGAACTGGGCCAGGCACCCCA +
Preference number: 3 (lower is better)
Translates to: SQGMFSVGPCGP*RHTLGTGPGTP
Trigger: TGGGGTGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp AGTGACCCAGTCCCATGGCCTGAGGGTGTGTGCCTTTaGAGAGCTCTCAGGTTCCTCGGGGGCTGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: SDPVPWPEGVCL*RALRFLGGCPL
Trigger: GAGGGGACAGCCCCCGAGGAACCTGAGAGCTCTGCAAAGGCACACACCCTCAGGCCATGGGACTGGGTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCATGCAGTGGCACCATCTaGGCTCCAGCCACCACCTCC +
Preference number: 3 (lower is better)
Translates to: LDPGPFEALRALLLPRASCSGTI*APATTS
Trigger: GGAGGTGGTGGCTGGAGCCAAGATGGTGCCACTGCA...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGTTGTGGCCGCACTCCTaGGAAGCTATGTCCACGGCT +
Preference number: 3 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGLWPHS*EAMSTA
Trigger: AGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAA...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTCCTGGGCGCTCCATGTaGCCTGAGTCAACCTGGCCC +
Preference number: 3 (lower is better)
Translates to: GSEATPSASSQGMFSVGPPGRSM*PESTWP
Trigger: GGGCCAGGTTGACTCAGGCAACATGGAGCGCCCAGG...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCCTGCCGGCACACACTaGGAACTGGGCCAGGCACCC +
Preference number: 3 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAPAGTH*ELGQAP
Trigger: GGGTGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp AGGACGGGGCAGGCCTGGTCCCTGGTCAGATCAGGATaGGGAGAGCAACTCCGGGCTCTCAACACCTCCATT +
Preference number: 3 (lower is better)
Translates to: RTGQAWSLVRSG*GEQLRALNTSI
Trigger: AATGGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCAGGCCTGCCCCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp GCTCTCATGCTGGCACCGGCTTGTGGCCGCACTCCTTaGAAGCTATGTCCACGGCTCTGGCTCAGGTTCACC +
Preference number: 3 (lower is better)
Translates to: ALMLAPACGRTP*KLCPRLWLRFT
Trigger: GGTGAACCTGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp CTGAGGCCTGGGCGCTCCATGTTGCCTGAGTCAACCTaGCCCATCCACCTGTCATCTCTGCAGCCTCACCCA +
Preference number: 3 (lower is better)
Translates to: LRPGRSMLPEST*PIHLSSLQPHP
Trigger: TGGGTGAGGCTGCAGAGATGACAGGTGGATGGGCCAGGTTGACTCAGGCAACATGGAGCGCCCAGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp CCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATaGGGGAAGGGAGTGGAGAAGGGAAACCTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: PRASRIPDQVGR*GKGVEKGNLLP
Trigger: AGGGAGCAGGTTTCCCTTCTCCACTCCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAACTGCTCCCTGACTCATaGCTGGGAAAGGCGCACAGG +
Preference number: 3 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQLLPDS*LGKAHR
Trigger: CCTGTGCGCCTTTCCCAGCAATGAGTCAGGGAGCAG...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTaGTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGG +
Preference number: 3 (lower is better)
Translates to: WTQAPLKLLGLC*SPGPQGSRIKW
Trigger: CCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp TCCTTCTGTGCCTGCTCTCATGCTGGCACCGGCTTGTaGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SFCACSHAGTGL*PHSLEAMSTAL
Trigger: CAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAGAAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp CACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTaGCCCTTGTGGCCCCTGCCGGCACACACTTGGAAC +
Preference number: 3 (lower is better)
Translates to: HTLSLIPGYVQC*PLWPLPAHTWN
Trigger: GTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCAGATGGAGGAACCCTaGCCTCCTGCTGCCCGCCAA +
Preference number: 3 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAQMEEP*PPAARQ
Trigger: TTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 72 bp CAGGCACCCCAGGGCCTGAGCGTGTGGCTGAACATTTaGCCAGTGAGGAATCAGGAACTGCCCAGAGGAGTG +
Preference number: 3 (lower is better)
Translates to: QAPQGLSVWLNI*PVRNQELPRGV
Trigger: CACTCCTCTGGGCAGTTCCTGATTCCTCACTGGTCAAATGTTCAGCCACACGCTCAGGCCCTGGGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR TCA 72 bp ATGGGGGAAGGGAGTGGAGAAGGGAAACCTGCTCCCTaGCTCATTGCTGGGAAAGGCGCACAGGTCAGCCGT +
Preference number: 3 (lower is better)
Translates to: MGEGSGEGKPAP*LIAGKGAQVSR
Trigger: ACGGCTGACCTGTGCGCCTTTCCCAGCAATGAGTCAGGGAGCAGGTTTCCCTTCTCCACTCCCTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp GCACCTGTGACAATTGCTGTGGCCAGAGAACTCCGGTaGTGCAGCCAGACCTGGATGCTATGCCCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: APVTIAVARELR*CSQTWMLCPAL
Trigger: CAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAGCAATTGTCACAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp ATCCTTCTCCCTCTGAGGCCAGCTCTCCCTGACTGCTaGGAAACAGCTCCCAGGAGGTCCAGGCGTATCCTA +
Preference number: 3 (lower is better)
Translates to: ILLPLRPALPDC*ETAPRRSRRIL
Trigger: TAGGATACGCCTGGACCTCCTGGGAGCTGTTTCCCAGCAGTCAGGGAGAGCTGGCCTCAGAGGGAGAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp ATGTTGGCCAGGCTGATGCAGCTTCTTACTGAGGCATaGGGGGCTTCAGTCCTGCCCTCACCTCCAGCCAAG +
Preference number: 3 (lower is better)
Translates to: MLARLMQLLTEA*GASVLPSPPAK
Trigger: CTTGGCTGGAGGTGAGGGCAGGACTGAAGCCCCCCATGCCTCAGTAAGAAGCTGCATCAGCCTGGCCAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAACTGGCTGGCTGTGGCTaGGGCCCTGTATGTCCCCAT +
Preference number: 3 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKLAGCG*GPVCPH
Trigger: ATGGGGACATACAGGGCCCAAGCCACAGCCAGCCAG...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp GGGGAGGTTAGTGCCACCCACTCCAGCTGGCTGAGGTaGCAGCGAGGTCTAACCCATTACGTTGAGAATGGA +
Preference number: 3 (lower is better)
Translates to: GEVSATHSSWLR*QRGLTHYVENG
Trigger: TCCATTCTCAACGTAATGGGTTAGACCTCGCTGGCACCTCAGCCAGCTGGAGTGGGTGGCACTAACCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp TTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTaGCCAGCCCCAGGGAAGATCATAGAGGGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: LVSPGMGNSTSA*PAPGKIIEGSH
Trigger: GTGGGAGCCCTCTATGATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp CAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTaGTTGCCCAGCCCCAGGGAAGATCATAGAGGGCTC +
Preference number: 3 (lower is better)
Translates to: QLSQSRNGKQHL*LPSPREDHRGL
Trigger: GAGCCCTCTATGATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp ATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCAGCTaGCTGAGGTGCCAGCGAGGTCTAACCCATTACGTT +
Preference number: 3 (lower is better)
Translates to: ICLGEVSATHSS*LRCQRGLTHYV
Trigger: AACGTAATGGGTTAGACCTCGCTGGCACCTCAGCCAGCTGGAGTGGGTGGCACTAACCTCCCCCAGACAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp AGTGGCCCTGGAGTGACTCGTAAGGCAGGTACCCTGTaGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACC +
Preference number: 3 (lower is better)
Translates to: SGPGVTRKAGTL*TVICLGEVSAT
Trigger: GGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGCCTTACGAGTCACTCCAGGGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTCGTGTGGCTGAACATTaGACCAGTGAGGAATCAGGA +
Preference number: 3 (lower is better)
Translates to: GSEATPSASSQGMFSVGPRVAEH*TSEESG
Trigger: TCCTGATTCCTCACTGGTCAAATGTTCAGCCACACG...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp GAACTAAAGAACTGTGAGGTCAGTGACCCAGTCCCATaGCCTGAGGGTGTGTGCCTTTGCAGAGCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: ELKNCEVSDPVP*PEGVCLCRALR
Trigger: CCTGAGAGCTCTGCAAAGGCACACACCCTCAGGCCATGGGACTGGGTCACTGACCTCACAGTTCTTTAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp AGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATaGCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGT +
Preference number: 3 (lower is better)
Translates to: RELRCCSQTWML*PALELKNCEVS
Trigger: ACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CCA 72 bp TTCAGAGTGGCAGGCAGCTCTTCACCAAGTTATTCCTaGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: FRVAGSSSPSYS*TQAPLKLLGLC
Trigger: ACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGCCACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAACATTCGGACCCTGGGTaGCGGCCCCAGTCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQHSDPG*RPQSSP
Trigger: GGGGCTGGACTGGGGCCGCAACCCAGGGTCCGAATG...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR GCA 72 bp GGAGAGCAACTCCGGGCTCTCAACACCTCCATTTATTaGATGTATACCCTGACTTCCTCACTGGTCCTTCTG +
Preference number: 3 (lower is better)
Translates to: GEQLRALNTSIY*MYTLTSSLVLL
Trigger: CAGAAGGACCAGTGAGGAAGTCAGGGTATACATGCAATAAATGGAGGTGTTGAGAGCCCGGAGTTGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR-3UTR CAA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAACAACACCTCCATTTATaGCATGTATACCCTGACTTC +
Preference number: 3 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKQHLHL*HVYPDF
Trigger: GAAGTCAGGGTATACATGCAATAAATGGAGGTGTTG...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCAGCCCGGTGGGCAGCGTaGGGGGTATCGCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: SVLALVAPAGTHLELGQAARWAA*GVSRVG
Trigger: CCCTACCCGCGATACCCCCCACGCTGCCCACCGGGC...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCAGGTAAGGTGGGCGCCTaGGGGGCGCTGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SVLALVAPAGTHLELGQAGKVGA*GALAGS
Trigger: GGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTACC...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAGACTGGGGCTGCCGCTaGTGCTGCAGGACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGDWGCR*CCRTEG
Trigger: GCCCTCCGTCCTGCAGCAGCAGCGGCAGCCCCAGTC...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGGGCTGGGACTGGGGCTaGCGCTGCTGCTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGGWDWG*RCCCRT
Trigger: CGTCCTGCAGCAGCAGCGGCAGCCCCAGTCCCAGCC...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAGGCTCGGAGGGCCGCTaGGTCCTGGCGCCACTGATG +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSGSEGR*VLAPLM
Trigger: CATCAGTGGCGCCAGGACTCAGCGGCCCTCCGAGCC...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTCGGTCCTCCAGGCACTaGAGCGCCCAGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPRSSRH*SAQLRR
Trigger: CCGCCTGAGCTGGGCGCTGCAGTGCCTGGAGGACCG...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGACAGCGCAGCAGGCTCTaGGCCTCGGCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGQRSRL*ASATVK
Trigger: CTTCACCGTGGCCGAGGCGCAGAGCCTGCTGCGCTG...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACCTGGGAGGTGAGGGCTaGGACTGGGGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHLGGEG*DWGCRC
Trigger: GCAGCGGCAGCCCCAGTCCCAGCCCTCACCTCCCAG...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACCGCTGCGCGGCCTCCTaGTGCATCAGCGCCGTGATC +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHRCAAS*CISAVI
Trigger: GATCACGGCGCTGATGCAGCAGGAGGCCGCGCAGCG...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTCCTCGCTCTCGCGCTaGGCGGCCTCCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPSSLSR*AASCCI
Trigger: GATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGA...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAGGCCGCCACTGCACGTaGTGCAGCTCCTCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSGRHCT*CSSSLS
Trigger: CGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCGGCC...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAGGCACGCGGCCAGGATaGTGGGGTCCACGACCAGGA +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSGTRPG*WGPRPG
Trigger: TCCTGGTCGTGGACCCCAGCATCCTGGCCGCGTGCC...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAGCGCCTGAGGGGCGCTaGCAGGTTCCTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSAPEGR*QVPWGQ
Trigger: CTGTCCCCAAGGAACCTGCCAGCGCCCCTCAGGCGC...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTCCCTGGAGGCGCTGTTaGCCCGGTGGGCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPPWRRC*PGGQRG
Trigger: CCCACGCTGCCCACCGGGCCAACAGCGCCTCCAGGG...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCCGCGTGGCCGCCCAGTaGCAAGTAGAGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSRVAAQ*QVEQPH
Trigger: GTGGGGCTGCTCTACTTGTCACTGGGCGGCCACGCG...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp GCAGGTACCCTGTGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCGCGCCTCGGCCACGGTaGAGGGGAAGTCGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGTLWTVICLGEVSATHSAPRPR*RGSRRP
Trigger: TGGGCGCCGACTTCCCCTTCACCGTGGCCGAGGCGC...GGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCATGGAGTGGTCCAGGTTaGCCGTGCAGCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRALLLPRASWSGPG*PCSAAG
Trigger: GCCTGCTGCGCTGCACGGTCAACCTGGACCACTCCA...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAGAGGCCAGCTCTCCCTaGCTGCTGGGAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGEASSP*LLGNSS
Trigger: GGAGCTGTTTCCCAGCAGTCAGGGAGAGCTGGCCTC...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTCCCGGCGCCAGCCACTaGCACCCACTTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPPGASH*HPLGGC
Trigger: ACAGCCACCAAGTGGGTGGCAGTGGCTGGCGCCGGG...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTGGAACTGCACGTTCCTaGGCCGCAGGTGCACCTCGG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPGTARS*AAGAPR
Trigger: CCGAGGTGCACCTGCGGCGCAGGAACGTGCAGTTCC...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAGCACCACGCGCAGCCTaGGCCGCTGGTAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRALLLPRASAPRAA*AAGRSP
Trigger: TGGAGATCTACCAGCGGCGCAGGCTGCGCGTGGTGC...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCATGCTGCTGCTGCTGCTaGAGCAGGCGCACGGTGATG +
Preference number: 4 (lower is better)
Translates to: SVLALVAPAGTHLELGQACCCCC*SRRTVM
Trigger: CATCACCGTGCGCCTGCTGCAGCAGCAGCAGCAGCA...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTGGCCGACAGGGCCCATaGGCTCGGAGGGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAGRQGP*ARRAAE
Trigger: CTCAGCGGCCCTCCGAGCCCATGGGCCCTGTCGGCC...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGGCTGCCGCAGGGGGCTaGGAGGTGAGGGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGAAAGG*EVRAGT
Trigger: AGTCCCAGCCCTCACCTCCCAGCCCCCTGCGGCAGC...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTCCGTGGTGGGTAAGGTaGGCGCCTGAGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPPWWVR*APEGRW
Trigger: CCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGG...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTGAGCTGGGCCACTCCTaGCCATGGCTGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPELGHS*PWLVPW
Trigger: CCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTC...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCACTGCCGGCACACACTTaGAACTGGGCCAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRALLLPRASLPAHT*NWARHP
Trigger: GGGGTGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAG...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGACAGTGTTGGCCCTTGTaGCCCCTGCCGGCACACACT +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGQCWPL*PLPAHT
Trigger: AGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTG...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAACAGTCGCGCTCGTCGTaGAGGCAGAAGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQQSRSS*RQKSAS
Trigger: GGAGGCGCTCTTCTGCCTTCACGACGAGCGCGACTG...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCTTCGCCGGCTTGCCCTaGGGCACGGCCCGACGGGGG +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACFAGLP*GTARRG
Trigger: CCCCCGTCGGGCCGTGCCTCAGGGCAAGCCGGCGAA...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACCCAGTGGCCCTGGAGTaGCTCGTAAGGCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHPVALE*LVRQVP
Trigger: GGGTACCTGCCTTACGAGTCACTCCAGGGCCACTGG...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCACTCTGGCAGCAGTCCTaGCTGGTGGCCGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSLWQQS*LVAGLL
Trigger: CAACAAGCCGGCCACCAGGCAGGACTGCTGCCAGAG...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTAAGTCCCCCTGCTGCTaGTGCTGCTGCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPKSPCC*CCCSRR
Trigger: GCGCCTGCTGCAGCAGCAGCAGCAGCAGGGGGACTT...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACTCTGGGCTTCGTGAATaGGGCAGAGCCGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHSGLRE*GRAAAA
Trigger: TGCGGCAGCGGCTCTGCCCCATTCACGAAGCCCAGA...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTCCATGGCTGGTGCCGTaGTGGGTAAGGTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPPWLVP*WVRWAP
Trigger: AGGCGCCCACCTTACCCACCACGGCACCAGCCATGG...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCGGCAGCAGTCCTGCCTaGTGGCCGGCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAGSSPA*WPACCP
Trigger: TGGGCAACAAGCCGGCCACCAGGCAGGACTGCTGCC...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCGGCTCATTCGGACCCTaGGTTGCGGCCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAGSFGP*VAAPVQ
Trigger: CTGGACTGGGGCCGCAACCCAGGGTCCGAATGAGCC...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCACCTCCTGGCTGGCTGTaGCTTGGGCCCTGTATGTCC +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRALLLPRASPPGWL*LGPCMS
Trigger: GGACATACAGGGCCCAAGCCACAGCCAGCCAGGAGG...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTACGTGTCCAGCCCGGTaGCCTCCAGCACCACGCGCA +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPATCPAR*PPAPRA
Trigger: TGCGCGTGGTGCTGGAGGTCACCGGGCTGGACACGT...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAAGGCTGCCGCTGCTGCTaGAGGACGGAGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKGCRCC*RTEGRR
Trigger: CCTCCTGCCCTCCGTCCTGCAGCAGCAGCGGCAGCC...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTAGGTACCACAGTAGCTaGGGGACGCCCCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPRYHSS*GTPQPL
Trigger: GAGCGGCTGGGGCGTCCCGCAGCTACTGTGGTACCT...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAATCGGTGCCCGCGTACTaGCAGGCGCTAAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQSVPAY*QALKRM
Trigger: CATCCGCTTTAGCGCCTGGCAGTACGCGGGCACCGA...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCACATAGTGGCGGCGGATaGCCTCGCACAACGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRALLLPRASHSGGG*PRTTWS
Trigger: TGACCACGTTGTGCGAGGGCATCCGCCGCCACTATG...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCCACGCTGAAGGGCAGTaGGCCATAGTGGCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAHAEGQ*AIVAAD
Trigger: ATCCGCCGCCACTATGGCGCACTGCCCTTCAGCGTG...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAACCGTGCCCTTCATGTTaGCCGCGCTCTCTAGGCACG +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQPCPSC*PRSLGT
Trigger: CGTGCCTAGAGAGCGCGGGCAACATGAAGGGCACGG...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTAGGTCGTCGCGGCTCTaGACCGCATCGTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPRSSRL*TASCRN
Trigger: GTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCT...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCCCTGCTGCTGCTGCTaGTGCAGCAGGCGCACGGTG +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAPCCCC*CSRRTV
Trigger: CACCGTGCGCCTGCTGCAGCAGCAGCAGCAGCAGGG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTTCCCCCTGCTGCTGCTaGTGCTGCAGCAGGCGCACG +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPASPCCC*CCSRRT
Trigger: CGTGCGCCTGCTGCAGCAGCAGCAGCAGCAGGGGGA...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGCGCCCCCGGTCTGCTaGCGGTCCTCCAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNAPPVC*RSSRHC
Trigger: GCAGTGCCTGGAGGACCGGCAGCAGACCGGGGGCGC...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAACCACCTGGGCTGGATTaGCCTGGACGGAAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQPPGLD*PGRKSA
Trigger: TGCGCTCTTCCGTCCAGGGCAATCCAGCCCAGGTGG...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTGCTaGCCGCCAAGTCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGTLASC*PPSPPF
Trigger: AAATGGAGGACTTGGCGGGCAGCAGGAGGCAAGGGT...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCATTCGGACCCTGGGTTaGGGCCCCAGTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPIRTLG*GPSPAP
Trigger: GGGGGCTGGACTGGGGCCGCAACCCAGGGTCCGAAT...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCCTGTGCCTGCTCTCATaGTGGCACCGGCTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWALCLLS*WHRLVA
Trigger: GGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAG...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGCTGGTCAGATCAGGATaGGGAGAGCAACTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGLVRSG*GEQLRA
Trigger: AGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAG...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGAGAAATGCCAGCCCCTaGCCTACTCACAGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGRNASP*PTHRGA
Trigger: TGCCCCTCTGTGAGTAGGGCAGGGGCTGGCATTTCT...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGTGGCCTGAGGGTGTGTaGCTTTGCAGAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGWPEGV*LCRALR
Trigger: CCTGAGAGCTCTGCAAAGGCACACACCCTCAGGCCA...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCAGCAGCCAGACCTGGATaGTATGCCCAGCCTTGGAAC +
Preference number: 4 (lower is better)
Translates to: SVLALVAPAGTHLELGQAAARPG*YAQPWN
Trigger: GTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGC...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTGCCAGAGAACTCCGGTaGTGCAGCCAGACCTGGATG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPARELR*CSQTWM
Trigger: CATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGC...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACGGGAAACAGCACCTCTaGTTGCCCAGCCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHGKQHL*LPSPRE
Trigger: TTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTTCCC...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACCAATGCCACTCGCTCTaGCAGCAGTCCTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHQCHSL*QQSCLV
Trigger: CACCAGGCAGGACTGCTGCCAGAGCGAGTGGCATTG...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGCGCCGGCGGATGGAGTaGTCCAGGTTGACCGTGCAG +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGRRRME*SRLTVQ
Trigger: CTGCACGGTCAACCTGGACCACTCCATCCGCCGGCG...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTTGGGCTGGATTGCCCTaGACGGAAGAGCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPWAGLP*TEERTG
Trigger: GCCTGTGCGCTCTTCCGTCCAGGGCAATCCAGCCCA...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp CTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTaGTGGCCCCTGCCGGCACACACTTGGAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLIPGYVQCWP*WPLPAHTWNWA
Trigger: GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGGTGGAGGGGGAATTGTaGGGGAGCAATGAAATCGCG +
Preference number: 4 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGVEGEL*GSNEIA
Trigger: CGCGATTTCATTGCTCCCTCACAATTCCCCCTCCAC...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTAGCCTCTGTGGGCATTaGATGATACGGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPSLCGH*MIRWRG
Trigger: CCCCCTCCACCGTATCATTCAATGCCCACAGAGGCT...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGCCCTTCTGGGCTTCGTaGATGGGGCAGAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LFLDPGPFEALRALLLPRPFWAS*MGQSRC
Trigger: GCAGCGGCTCTGCCCCATTCACGAAGCCCAGAAGGG...CCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTAGGACTGGGATTCCCTaGGGCCTGGGCGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPRTGIP*GLGAPC
Trigger: ACATGGAGCGCCCAGGCCTCAGGGAATCCCAGTCCT...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAAGGTGGAGCAGCTTGCTaGGGTCACCGAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQGGAAC*GHRGHP
Trigger: AGGATGACCTCGGTGACCTCAGCAAGCTGCTCCACC...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACGGGAAACCTGCTCCCTaGCTCATTGCTGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHGKPAP*LIAGKG
Trigger: GCCTTTCCCAGCAATGAGTCAGGGAGCAGGTTTCCC...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCGGGGACAGTGGAGGTTaGAGGCAGCCCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTGDSGG*RQPLLG
Trigger: GCCCAGAAGGGGCTGCCTGCAACCTCCACTGTCCCC...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACTTGTCCAGCATCATGTaGAGGCGGCAGCCGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHLSSIM*RRQPKG
Trigger: CCCTTTCGGCTGCCGCCTGCACATGATGCTGGACAA...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCACGCGGCGCCGACAATaGCACTCGCTCTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTTRRRQ*HSLWQQ
Trigger: CTGCTGCCAGAGCGAGTGGCATTGTCGGCGCCGCGT...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGATGGCTTACGAACAGGTaGTTGCCCACCGAGTACACG +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGWLTNR*LPTEYT
Trigger: CGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCA...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCCCGGCAGCCACGGCTTaGGCGTCATCTCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTPAATA*ASSRGT
Trigger: TGTACCGCGAGATGACGCGCAAGCCGTGGCTGCCGG...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTATGGCCTTCGCCGGCTTaGCCTGAGGCACGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLWPSPA*PEARPD
Trigger: GTCGGGCCGTGCCTCAGGGCAAGCCGGCGAAGGCCA...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCCTGGGCGCTCCATGTTaGCTGAGTCAACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSLGAPC*LSQPGP
Trigger: TGGGCCAGGTTGACTCAGGCAACATGGAGCGCCCAG...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTGGCCCTTGTGGCCCCTaGCGGCACACACTTGGAACT +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPGPCGP*RHTLGT
Trigger: AGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCC...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAAATCAGTCGGAGTCTTaGTCTGTCGCCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGNQSES*SVAQAG
Trigger: TCCAGCCTGGGCGACAGAGCAAGACTCCGACTGATT...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTGGGAGCACACAGGCTTaGCGTAGCCTCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPGSTQA*RSLCGH
Trigger: ATGCCCACAGAGGCTACGCCAAGCCTGTGTGCTCCC...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATCGGGCAGCTGGGTGCTaGGGGCCTGCTCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNRAAGC*GPAPEA
Trigger: TGCCTCAGGAGCAGGCCCCCAGCACCCAGCTGCCCG...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTAGAAGTAGTGCCCGTTaGGGCTCTGGGCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPRSSAR*GSGHPW
Trigger: CCAAGGATGCCCAGAGCCCCAACGGGCACTACTTCT...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTACAGGGACCGGCACGTaGCAGAGTGTCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPTGTGT*QSVLAR
Trigger: CCTGGCCAAGACACTCTGCCACGTGCCGGTCCCTGT...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGTACCCTGTGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCTGCCCTCGCACAACGTaGTCACCAGGCCGGCCCACA +
Preference number: 4 (lower is better)
Translates to: AGTLWTVICLGEVSATHSCPRTT*SPGRPT
Trigger: TGTGGGCCGGCCTGGTGACCACGTTGTGCGAGGGCA...GGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAAAAGATGAAGGGCGCGTaGCTGTCGGACAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQKMKGA*LSDSSV
Trigger: CACGCTGCTGTCCGACAGCCACGCGCCCTTCATCTT...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAAAGGCGGCACGGCCACTaGTTGGCGAGCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKRRHGH*LASTTH
Trigger: GTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCGCCT...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAAGCAACGCCTTGGTCATaGTGTGCAGCTCGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQATPWS*CAARGC
Trigger: ACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGC...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCGCCAAGTCCCCAGTGTaGTGGCCTTCGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTAKSPV*WPSPAC
Trigger: GCAAGCCGGCGAAGGCCACCACACTGGGGACTTGGC...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTCATTTAAGGCCCACCTaGGCTGGATTGCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPHLRPT*AGLPWT
Trigger: CGTCCAGGGCAATCCAGCCCAGGTGGGCCTTAAATG...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTCCCATCTGGGCAGATaGAGGAACCCTTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPSHLGR*RNPCLL
Trigger: CAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGA...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCGTGGGCTTAGCAGGATaGGGCAGGCCCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTVGLAG*GRPCGR
Trigger: CCTGCCACAGGGCCTGCCCCATCCTGCTAAGCCCAC...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAGATGGGGGAAGGGAGTaGAGAAGGGAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSDGGRE*RRETCS
Trigger: GGAGCAGGTTTCCCTTCTCCACTCCCTTCCCCCATC...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp TGGTCCTTCTGTGCCTGCTCTCATGCTGGCACCGGCTaGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCT +
Preference number: 4 (lower is better)
Translates to: WSFCACSHAGTG*WPHSLEAMSTA
Trigger: AGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCACAGAAGGACCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp CCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTaGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAA +
Preference number: 4 (lower is better)
Translates to: PHPQPHPRVCSV*ALVAPAGTHLE
Trigger: TTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTaGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTG +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRAL*LPRASRIPDQV
Trigger: CACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTGCTGCATCAGCGCCGTaGTCTTGTCCAGCATCATGT +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPAASAP*SCPASC
Trigger: ACATGATGCTGGACAAGATCACGGCGCTGATGCAGC...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATCCGAGTACACGGCCATaGGCAGCCCCGAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNPSTRP*AAPSPT
Trigger: TGTCGGGCTCGGGGCTGCTCATGGCCGTGTACTCGG...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTTCTTCACCTCGCACATaGAACCCAGCTGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPSSPRT*NPAGCR
Trigger: TCGGCAGCCAGCTGGGTTTCATGTGCGAGGTGAAGA...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAAAGCACAGGAAGTCGGTaGGCAGCTCCACCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQSTGSR*AAPPPS
Trigger: AGAAGGAGGTGGAGCTGCTCACCGACTTCCTGTGCT...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCCCCAGTCCCATGGCCTaGGGGTGTGTGCCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTPSPMA*GCVPLQ
Trigger: CTGCAAAGGCACACACCCTCAGGCCATGGGACTGGG...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTCCATGTTGGCCAGGCTaGTGCAGCTTCTTACTGAGG +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPPCWPG*CSFLLR
Trigger: CCTCAGTAAGAAGCTGCATCAGCCTGGCCAACATGG...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCCAGCATCCTTTTCGGTaGCCCAACTCTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSQHPFR*PNSGSQ
Trigger: CTGGGACCCAGAGTTGGGGCACCGAAAAGGATGCTG...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACTCGGTGATGATGGGCTaGAGGAACACCAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHSVMMG*RNTRYH
Trigger: GTGGTACCTGGTGTTCCTGCAGCCCATCATCACCGA...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTTGGTGGCCGGCTTGTTaGCCAGCACCGAGTACACGC +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAWWPAC*PAPSTR
Trigger: GCGTGTACTCGGTGCTGGGCAACAAGCCGGCCACCA...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTTACGAACAGGTGCTTaGCCACCGAGTACACGGCCA +
Preference number: 4 (lower is better)
Translates to: LWPENSGAAARPGCYAQPLRTGA*PPSTRP
Trigger: TGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAA...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGGCCTTGGTCATGGTGTaGAGCTCGCGGCTGTTGTCG +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGALVMV*SSRLLS
Trigger: CGACAACAGCCGCGAGCTGCACACCATGACCAAGGC...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAACCACCGGCCATAGCTTaGCCCTGTGGGCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKPPAIA*PCGPSP
Trigger: GGGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGG...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTAACAGCACCTCTGCTTaGCCAGCCCCAGGGAAGATC +
Preference number: 4 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPNSTSA*PAPGKI
Trigger: GATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTT...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAGCAATGAAATCGCGGTaGTCCAATTTGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGAMKSR*SNLGRG
Trigger: GCCTCTCCCCAAATTGGACCACCGCGATTTCATTGC...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCCATCAGTGGGCTCGCTaGGCTTCAGGAGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPHQWAR*ASGGRQ
Trigger: CTGGCGTCCTCCTGAAGCCCAGCGAGCCCACTGATG...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCGGGGCCGGGCATCAGTaGGCTCGCTGGGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACGAGHQ*ARWASG
Trigger: TCCTGAAGCCCAGCGAGCCCACTGATGCCCGGCCCC...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCAGCAGTCCTGCCTGGTaGCCGGCTTGTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTSSPAW*PACCPA
Trigger: TGCTGGGCAACAAGCCGGCCACCAGGCAGGACTGCT...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGCACATGAAACCCAGCTaGCTGCCGAACTTTTCACGC +
Preference number: 4 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGHMKPS*LPNFSR
Trigger: GCGTGAAAAGTTCGGCAGCCAGCTGGGTTTCATGTG...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTACAGAAGAGCGCCTCCTaGATTCGCCGCGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLQKSAS*IRRAAS
Trigger: CGAGGCGGCGCGGCGAATCCAGGAGGCGCTCTTCTG...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGCACGGCCACTGGTTaGCGAGCACCACCCACGCCA +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNGTATG*RAPPTP
Trigger: TGGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCC...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGTACCCTGTGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCTGGCTCAGGTTCACCTaGGGGTGTGGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: AGTLWTVICLGEVSATHSWLRFT*GCGPHR
Trigger: CCTGTGAGGCCCACACCCCCAGGTGAACCTGAGCCA...GGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCTGTGGCCGCACTCCTTaGAAGCTATGTCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSCGRTP*KLCPRL
Trigger: GAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACA...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTTGCCTGCTCTCATGCTaGCACCGGCTTGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPACLLSC*HRLVAA
Trigger: TGCGGCCACAAGCCGGTGCCAGCATGAGAGCAGGCA...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCGGGCAAGCTAGGGCATaGGGACAAGGACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAGQARA*GQGLGF
Trigger: GAATCCCAGTCCTTGTCCCCATGCCCTAGCTTGCCC...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAGGACAGTTATTTGTCTaGGGGAGGTTAGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGGQLFV*GRLVPP
Trigger: GGGTGGCACTAACCTCCCCCAGACAAATAACTGTCC...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp CCAGGCACCCCAGGGCCTGAGCGTGTGGCTGAACATTaGACCAGTGAGGAATCAGGAACTGCCCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PGTPGPERVAEH*TSEESGTAQRS
Trigger: ACTCCTCTGGGCAGTTCCTGATTCCTCACTGGTCAAATGTTCAGCCACACGCTCAGGCCCTGGGGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGCACCGGCTTGTGGCCGCACTCCTTGGAAGCTATGTCCACGGCTCTGGCTCAACCGCGTTTCCAATGTaGAGAGCCGAAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: WHRLVAALLGSYVHGSGSTAFPM*RAESRT
Trigger: TGTCCTGCTTTCGGCTCTTCACATTGGAAACGCGGT...TGAGCCAGAGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp GCAGGTACCCTGTGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCGCACCGAGTACACGCTaGAGGGCAGTGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: AGTLWTVICLGEVSATHSAPSTR*RAVRHS
Trigger: ACTATGGCGCACTGCCCTTCAGCGTGTACTCGGTGC...GGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCGCGCTCCATGTTGCCTaGGTCAACCTGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPALHVA*VNLAHP
Trigger: TGGATGGGCCAGGTTGACTCAGGCAACATGGAGCGC...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCTGGCTTCAGTGTCAGTaGCTAACCAGTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAWLQCQ*LTSGPG
Trigger: TCCAGGGCCACTGGTTAGTCACTGACACTGAAGCCA...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAAACCTGCATGCACCTGTaGCAATTGCTGTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WTQAPLKLLGLCCSPGPQTCMHL*QLLWPE
Trigger: CTCTGGCCACAGCAATTGTCACAGGTGCATGCAGGT...TTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAATGCGCGGCCTCCTGCTaGATCAGCGCCGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKCAASC*ISAVIL
Trigger: CAAGATCACGGCGCTGATGCAGCAGGAGGCCGCGCA...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACGCCACTGCACGTGCTaGAGCTCCTCGCTCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPRHCTC*SSSLSR
Trigger: GCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACCCACAGCTTGTCGGTaGCCGCGTACTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPPTACR*PRTARR
Trigger: GCGCCTGGCAGTACGCGGGCACCGACAAGCTGTGGG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGTCGAGCACGTTCTaGAACGCCTTGGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWARSSTF*NALVMV
Trigger: CACCATGACCAAGGCGTTGCAGAACGTGCTCGACCT...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTCCAGCTGGCTGAGGTaGCAGCGAGGTCTAACCCAT +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPSSWLR*QRGLTH
Trigger: ATGGGTTAGACCTCGCTGGCACCTCAGCCAGCTGGA...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCTGTAATGTTTGTGCATaGCAGCCGGGCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWACNVCA*QPGSWV
Trigger: CACCCAGCTGCCCGGCTGCCATGCACAAACATTACA...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGTACCCTGTGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCGTTCCTTGGGGACAGTaGAGGTTGCAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGTLWTVICLGEVSATHSVPWGQ*RLQAAP
Trigger: AGGGGCTGCCTGCAACCTCCACTGTCCCCAAGGAAC...GGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATTGGCTGGTGCCGTGGTaGGTAAGGTGGGCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNWLVPW*VRWAPE
Trigger: CTCAGGCGCCCACCTTACCCACCACGGCACCAGCCA...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACCGAGCCCGACAGTGTaGTGGCCGCGCCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPPSPTV*WPRRQT
Trigger: TGTTTGGCGGCGCGGCCACCACACTGTCGGGCTCGG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCCATAGCTTGCCCCTGTaGGCCAAGTCCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HYVENGATLGVEQLAEVTHSLPL*AKSPVW
Trigger: CCACACTGGGGACTTGGCCCACAGGGGCAAGCTATG...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAAGGCAGGCCTGGTCCCTaGTCAGATCAGGATGCGGAG +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKGRPGP*SDQDAE
Trigger: CTCCGCATCCTGATCTGACCAGGGACCAGGCCTGCC...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAAAGGACGGGGCAGGCCTaGTCCCTGGTCAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKRTGQA*SLVRSG
Trigger: TCCTGATCTGACCAGGGACCAGGCCTGCCCCGTCCT...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTTGGCTGGCTGTGGCTTaGGCCCTGTATGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAWLAVA*ALYVPI
Trigger: GATGGGGACATACAGGGCCCAAGCCACAGCCAGCCA...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGCTTCTTACTGAGGCATaGGGGGCTTCAGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGLLTEA*GASVLP
Trigger: GGGCAGGACTGAAGCCCCCCATGCCTCAGTAAGAAG...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCAATTGCATGTATACCCTaGCTTCCTCACTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVLALVAPAGTHLELGQAIACIP*LPHWSF
Trigger: GAAGGACCAGTGAGGAAGTCAGGGTATACATGCAAT...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACCATAGCAGCTCCACGTaGAGATACAGTGACCAACAG +
Preference number: 4 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHHSSST*RYSDQQ
Trigger: CTGTTGGTCACTGTATCTTCACGTGGAGCTGCTATG...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCTTCCTGCGCCGCAGGTaGACCTCGGTGATGATGGGC +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACFLRRR*TSVMMG
Trigger: GCCCATCATCACCGAGGTGCACCTGCGGCGCAGGAA...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATAGCCGTTATCGGCCGTaGCCTTCATGTTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNSRYRP*PSCCPR
Trigger: GCGCGGGCAACATGAAGGGCACGGCCGATAACGGCT...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCAGCATCGTGCAGGAACTaGAGCTTGGTGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPASCRN*SLVRRP
Trigger: GGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGC...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACCCCCAAAGTCCCCCTaGTGCTGCTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPPPKSP*CCCCCS
Trigger: GCTGCAGCAGCAGCAGCAGCAGGGGGACTTTGGGGG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGGAGGGTGTGTGCCTTTaGAGAGCTCTCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGEGVCL*RALRFL
Trigger: GAGGAACCTGAGAGCTCTGCAAAGGCACACACCCTC...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCTCTTAGGGCTCTGTTaGTCCCCAGGGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPALLGLC*SPGPQG
Trigger: TCCTTGAGGCCCTGGGGAGCAACAGAGCCCTAAGAG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAAGCTGCCAGTGTGATTaGGGGGAAGGCCGACAGGGC +
Preference number: 4 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLSCQCD*GEGRQG
Trigger: GCCCTGTCGGCCTTCCCCCCAATCACACTGGCAGCT...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCAGGCCACTCCTGGCCATaGCTGGTGCCGTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPGHSWP*LVPWWV
Trigger: TACCCACCACGGCACCAGCCATGGCCAGGAGTGGCC...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCAAGTCCCCAGTGTGGTaGCCTTCGCCGGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACKSPVW*PSPACP
Trigger: AGGGCAAGCCGGCGAAGGCCACCACACTGGGGACTT...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCCCCTATTCTCCCATCTaGGCAGATGGAGGAACCCTT +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAPYSPI*ADGGTL
Trigger: AAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGG...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCGCTGGCACCGGCTTGTaGCCGCACTCCTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACAGTGL*PHSLEA
Trigger: AGCTTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGC...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCAGCCACCCACTCCAGCTaGCTGAGGTGCCAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPATHSS*LRCQRG
Trigger: ACCTCGCTGGCACCTCAGCCAGCTGGAGTGGGTGGC...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGTGCCCAGAGGGAAAGTaGGGGAGCCCTAGTGTAACC +
Preference number: 4 (lower is better)
Translates to: LFLDPGPFEALRALLLPRCPEGK*GSPSVT
Trigger: GGTTACACTAGGGCTCCCCCACTTTCCCTCTGGGCA...CCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGAGTGACCCAGTCCCATaGCCTGAGGGTGTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LFLDPGPFEALRALLLPRSDPVP*PEGVCL
Trigger: AAGGCACACACCCTCAGGCCATGGGACTGGGTCACT...CCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTGATCAAGTGGGCAGATaGGGGAAGGGAGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSEATPSASSQGMFSVGPDQVGR*GKGVEK
Trigger: CTTCTCCACTCCCTTCCCCCATCTGCCCACTTGATC...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp AAGGGAGTGGAGAAGGGAAACCTGCTCCCTGACTCATaGCTGGGAAAGGCGCACAGGTCAGCCGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KGVEKGNLLPDS*LGKAHRSAVLL
Trigger: AAGGAGCACGGCTGACCTGTGCGCCTTTCCCAGCAATGAGTCAGGGAGCAGGTTTCCCTTCTCCACTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAATTGTGAGGGAGCAATaGAATCGCGGTGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: LDPGPFEALRALLLPRASIVREQ*NRGGPI
Trigger: AATTGGACCACCGCGATTTCATTGCTCCCTCACAAT...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACCAAAGTCCCCCTGCTaGTGCTGCTGCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPPKSPC*CCCCSR
Trigger: CCTGCTGCAGCAGCAGCAGCAGCAGGGGGACTTTGG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATTCGGTGCCCCAACTCTaGGTCCCAGAAGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNSVPQL*VPEVVP
Trigger: GGGCACTACTTCTGGGACCCAGAGTTGGGGCACCGA...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAACGTGGCAGAGTGTCTTaGCCAGGCAGCTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKRGRVS*PGSCSR
Trigger: TCTACTGCAGCTGCCTGGCCAAGACACTCTGCCACG...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATAAGGCCCACCTGGGCTaGATTGCCCTGGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNKAHLG*IALDGR
Trigger: TCTTCCGTCCAGGGCAATCCAGCCCAGGTGGGCCTT...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCGTTCACCTGGGGGTGTaGGCCTCACAGGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACVHLGV*ASQGSF
Trigger: GAATGAGCCCTGTGAGGCCCACACCCCCAGGTGAAC...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCTATGTCCACGGCTCTaGCTCAGGTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACLCPRL*LRFTWG
Trigger: CCCCCAGGTGAACCTGAGCCAGAGCCGTGGACATAG...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAAGGCAGGTACCCTGTaGACAGTTATTTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAKAGTL*TVICLG
Trigger: CCCCAGACAAATAACTGTCCACAGGGTACCTGCCTT...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGCTCTCCCTGACTGCTaGGAAACAGCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNALPDC*ETAPRR
Trigger: CCTCCTGGGAGCTGTTTCCCAGCAGTCAGGGAGAGC...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAGTTTATTGTCACATGTaGATGTTCAGAGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGVYCHM*MFRVAG
Trigger: GCCTGCCACTCTGAACATCCACATGTGACAATAAAC...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp CTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTaGCCCAGCCCCAGGGAAGATCATAGAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSQSRNGKQHLC*PSPREDHRGLP
Trigger: TGGGAGCCCTCTATGATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp GCTGGGAAAGGCGCACAGGTCAGCCGTGCTCCTTTTTaGTTCGTGACAACGGTCCCGTGGCTTTACACAGGT +
Preference number: 4 (lower is better)
Translates to: AGKGAQVSRAPF*FVTTVPWLYTG
Trigger: ACCTGTGTAAAGCCACGGGACCGTTGTCACGAACAAAAAAGGAGCACGGCTGACCTGTGCGCCTTTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCGCTACAGGGATATATTaGCCCCAACCACACATCTAC +
Preference number: 4 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWAATGIY*PQPHIY
Trigger: GTAGATGTGTGGTTGGGGTCAATATATCCCTGTAGC...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGCACGTGAAGATACAGTaGCCAACAGTTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGHVKIQ*PTVWPQ
Trigger: CTGTGGCCAAACTGTTGGTCACTGTATCTTCACGTG...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAAGCCGCTCGATCTTCTTaGGCTGGCTTACGAACAGGT +
Preference number: 4 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKAARSS*AGLRTG
Trigger: ACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGC...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCTCTGCACCGCATCGTaGAGGAACTGCAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACLCTAS*RNCSLV
Trigger: CACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAG...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCATGGTCCTTCTGTGCCTaGTCTCATGCTGGCACCGGC +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPWSFCA*SHAGTG
Trigger: GCCGGTGCCAGCATGAGAGCAGGCACAGAAGGACCA...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGTCGATCTTCTTGCGCTaGCTTACGAACAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGSIFLR*LTNRCL
Trigger: CAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGA...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATCGTTCTGCAACGCCTTaGTCATGGTGTGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNRSATP*SWCAAR
Trigger: GCGAGCTGCACACCATGACCAAGGCGTTGCAGAACG...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCAGGGTATGTTCAGTGTTaGCCCTTGTGGCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPGYVQC*PLWPLP
Trigger: CGGCAGGGGCCACAAGGGCCAACACTGAACATACCC...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTGTGACAACGGTCCCGTaGCTTTACACAGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ETDLTVSRGPILLPLRPAVTTVP*LYTGAS
Trigger: ACTTGCACCTGTGTAAAGCCACGGGACCGTTGTCAC...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACACAGAGATGCCAGATaGGGAGGCCAGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPHRDAR*GGQHGA
Trigger: TGCACCATGCTGGCCTCCTCATCTGGCATCTCTGTG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATCGCGGTGGTCCAATTTaGGGAGAGGCTCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNRGGPI*GEAQQT
Trigger: AGTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCG...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCAGAAACAAACCCAACTaGAACTGGCTTAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPRNKPN*NWLKGG
Trigger: GCCTCCCTTAAGCCAGTTTCAGTTGGGTTTGTTTCT...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCATCACTGGTCCTTCTGTaGCTGCTCTCATGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPSLVLL*LLSCWH
Trigger: GTGCCAGCATGAGAGCAGGCACAGAAGGACCAGTGA...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCATGCTCCCTGACTCATTaGTGGGAAAGGCGCACAGGT +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPCSLTH*WERRTG
Trigger: ACCTGTGCGCCTTTCCCAGCAATGAGTCAGGGAGCA...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATTGGAGAAGGGAAACCTaGTCCCTGACTCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNWRRET*SLTHCW
Trigger: CCAGCAATGAGTCAGGGAGCAGGTTTCCCTTCTCCA...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTACAAACTCGGGCAAGATaGGTGTACCGCGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLQTRAR*VYRVSN
Trigger: ATTGGAAACGCGGTACACCCATCTTGCCCGAGTTTG...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGGCTCTGGGCATCCTTaGCGAAGTGGACTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLGSGHP*RSGLCN
Trigger: ATTACAAAGTCCACTTCGCCAAGGATGCCCAGAGCC...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCATCTGTGGGCATTGAATaGTACGGTGGAGGGGGAATT +
Preference number: 4 (lower is better)
Translates to: TWMLCPALELKNCEVSDPSVGIE*YGGGGI
Trigger: AATTCCCCCTCCACCGTATCATTCAATGCCCACAGA...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR TCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAACGCCGCCAAACACCTTaGGCAGGCTGCCGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQRRQTP*AGCRSG
Trigger: GCCCGAGCGGCAGCCTGCTCAAGGTGTTTGGCGGCG...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
3UTR CAA 72 bp CGGAGAGCAACTCCGGGCTCTCAACACCTCCATTTATaGCATGTATACCCTGACTTCCTCACTGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRATPGSQHLHL*HVYPDFLTGPS
Trigger: AGAAGGACCAGTGAGGAAGTCAGGGTATACATGCAATAAATGGAGGTGTTGAGAGCCCGGAGTTGCTCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAAGCCCGACAGTGTGGTaGCCGCGCCGCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQSPTVW*PRRQTP
Trigger: AGGTGTTTGGCGGCGCGGCCACCACACTGTCGGGCT...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCAACACCTCCATTTATTaGATGTATACCCTGACTTCC +
Preference number: 4 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACNTSIY*MYTLTS
Trigger: GGAAGTCAGGGTATACATGCAATAAATGGAGGTGTT...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAATGCCCGTTGGGGCTCTaGGCATCCTTGGCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQCPLGL*ASLAKW
Trigger: CCACTTCGCCAAGGATGCCCAGAGCCCCAACGGGCA...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAGCAGTGGCACCATCTTaGCTCCAGCCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQAVAPS*LQPPPP
Trigger: GGGAGGTGGTGGCTGGAGCCAAGATGGTGCCACTGC...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAACGCTGGCAGGTTCCTTaGGGACAGTGGAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQRWQVP*GQWRLQ
Trigger: CTGCAACCTCCACTGTCCCCAAGGAACCTGCCAGCG...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAACGGATGAAAAGGAACTaGACGTTCCTGCGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQRMKRN*TFLRRR
Trigger: CCTGCGGCGCAGGAACGTGCAGTTCCTTTTCATCCG...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR GCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAGGTCATCCTCAGAAATaGCAGCCCCTGCCCTACTCA +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQGHPQK*QPLPYS
Trigger: TGAGTAGGGCAGGGGCTGGCATTTCTGAGGATGACC...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAATTGCCTGAGTCAACCTaGCCCATCCACCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQLPEST*PIHLSS
Trigger: AGATGACAGGTGGATGGGCCAGGTTGACTCAGGCAA...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CCA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAATGTGGATGTTCAGAGTaGCAGGCAGCTCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQCGCSE*QAALHQ
Trigger: TTGGTGAAGAGCTGCCTGCCACTCTGAACATCCACA...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp CGGCCCTCGGGCGCGCCCCCGGTCTGCTGCCGGTCCTCCAGGCACTaGAGCGCCCAGCTCAGGCGGCACGGCCACTGGTTGGCGAGCACC +
Preference number: 5 (lower is better)
Translates to: RPSGAPPVCCRSSRH*SAQLRRHGHWLAST
Trigger: GGTGCTCGCCAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGTGCCTGGAGGACCGGCAGCAGACCGGGGGCGCGCCCGAGGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp CCTCCAGGCACTGCAGCGCCCAGCTCAGGCGGCACGGCCACTGGTTaGCGAGCACCACCCACGCCACCGCCTGGCGCGGCGTGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PPGTAAPSSGGTATG*RAPPTPPPGAAWGP
Trigger: GGGGCCCCACGCCGCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGTGCCTGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS TCA 90 bp GCAGCCCCGAGCCCGACAGTGTGGTGGCCGCGCCGCCAAACACCTTaGGCAGGCTGCCGCTCGGGCTGCCGTGGCCCAGCGCGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: AAPSPTVWWPRRQTP*AGCRSGCRGPARGR
Trigger: GCGGCCACGCGCTGGGCCACGGCAGCCCGAGCGGCAGCCTGCTCAAGGTGTTTGGCGGCGCGGCCACCACACTGTCGGGCTCGGGGCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp CAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGCTGCATCAGCGCTaGGGGAAGGGAGCCCGGGAGCCGCGTGAGCCGCAGACCCGCCGG +
Preference number: 5 (lower is better)
Translates to: QLLALALRGLLLHQR*GKGAREPREPQTRR
Trigger: CCGGCGGGTCTGCGGCTCACGCGGCTCCCGGGCTCCCTTCCCGCAGCGCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589776.1
CDS CCA 90 bp CGGTCCTCCAGGCACTGCAGCGCCCAGCTCAGGCGGCACGGCCACTaGTTGGCGAGCACCACCCACGCCACCGCCTGGCGCGGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: RSSRHCSAQLRRHGH*LASTTHATAWRGVG
Trigger: CCCCACGCCGCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGTGCCTGGAGGACCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS TCA 90 bp CCTGTGGGCCAAGTCCCCAGTGTGGTGGCCTTCGCCGGCTTGCCCTaGGGCACGGCCCGACGGGGGCGCCCTGGAGGCGCTGTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: PVGQVPSVVAFAGLP*GTARRGRPGGAVGP
Trigger: CGGGCCAACAGCGCCTCCAGGGCGCCCCCGTCGGGCCGTGCCTCAGGGCAAGCCGGCGAAGGCCACCACACTGGGGACTTGGCCCACAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp GGGACGCCCCAGCCGCTCACGGCACGCGGCCGCCACTGCACGTGCTaGAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGCTGCATCAGC +
Preference number: 5 (lower is better)
Translates to: GTPQPLTARGRHCTC*SSSLSRCAASCCIS
Trigger: GCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCGGCCGCGTGCCGTGAGCGGCTGGGGCGTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp TGCGGGACGCCCCAGCCGCTCACGGCACGCGGCCGCCACTGCACGTaGTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGCTGCATC +
Preference number: 5 (lower is better)
Translates to: CGTPQPLTARGRHCT*CSSSLSRCAASCCI
Trigger: GATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCGGCCGCGTGCCGTGAGCGGCTGGGGCGTCCCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp AGTAGCTGCGGGACGCCCCAGCCGCTCACGGCACGCGGCCGCCACTaGACGTGCTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSCGTPQPLTARGRH*TCCSSSLSRCAASC
Trigger: GCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCGGCCGCGTGCCGTGAGCGGCTGGGGCGTCCCGCAGCTACT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp CACAGGCCGCTGGGGCGGGCAGGGGCCGGGCATCAGTGGGCTCGCTaGGCTTCAGGAGGACGCCAGCCGCGGAGGGTAGAGCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: HRPLGRAGAGHQWAR*ASGGRQPRRVELGH
Trigger: GTGGCCCAGCTCTACCCTCCGCGGCTGGCGTCCTCCTGAAGCCCAGCGAGCCCACTGATGCCCGGCCCCTGCCCGCCCCAGCGGCCTGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp GCAGCTGCGCGCTCTCGCCCCCGGCGTCCCCCGGCAGCCACGGCTTaGGCGTCATCTCGCGGTACAACAGGTCGTCGCGGCTCTGCACCG +
Preference number: 5 (lower is better)
Translates to: AAARSRPRRPPAATA*ASSRGTTGRRGSAP
Trigger: CGGTGCAGAGCCGCGACGACCTGTTGTACCGCGAGATGACGCGCAAGCCGTGGCTGCCGGGGGACGCCGGGGGCGAGAGCGCGCAGCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp TGCACGTGCTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGCTaGATCAGCGCTGCGGGAAGGGAGCCCGGGAGCCGCGTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: CTCCSSSLSRCAASC*ISAAGREPGSRVSR
Trigger: GCGGCTCACGCGGCTCCCGGGCTCCCTTCCCGCAGCGCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589776.1
CDS CCA 90 bp GCCACTGGTTGGCGAGCACCACCCACGCCACCGCCTGGCGCGGCGTaGGGCCCCCAAAGTCCCCCTGCTGCTGCTGCTGCTGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ATGWRAPPTPPPGAA*GPQSPPAAAAAAAG
Trigger: GCCTGCTGCAGCAGCAGCAGCAGCAGGGGGACTTTGGGGGCCCCACGCCGCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCAACCAGTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp CACTGCACGTGCTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTaGTGCATCAGCGCTGCGGGAAGGGAGCCCGGGAGCCGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: HCTCCSSSLSRCAAS*CISAAGREPGSRVS
Trigger: GCTCACGCGGCTCCCGGGCTCCCTTCCCGCAGCGCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589776.1
CDS CCA 90 bp GGAGGACGCCAGCCGCGGAGGGTAGAGCTGGGCCACTCCTGGCCATaGCTGGTGCCGTGGTGGGTAAGGTGGGCGCCTGAGGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GGRQPRRVELGHSWP*LVPWWVRWAPEGRW
Trigger: CCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTACCCTCCGCGGCTGGCGTCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp CGGCGGATGGAGTGGTCCAGGTTGACCGTGCAGCGCAGCAGGCTCTaGGCCTCGGCCACGGTGAAGGGGAAGTCGGCGCCCAGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RRMEWSRLTVQRSRL*ASATVKGKSAPRKR
Trigger: GCGCTTCCTGGGCGCCGACTTCCCCTTCACCGTGGCCGAGGCGCAGAGCCTGCTGCGCTGCACGGTCAACCTGGACCACTCCATCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp CCGCGGAGGGTAGAGCTGGGCCACTCCTGGCCATGGCTGGTGCCGTaGTGGGTAAGGTGGGCGCCTGAGGGGCGCTGGCAGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PRRVELGHSWPWLVP*WVRWAPEGRWQVPW
Trigger: CCAAGGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTACCCTCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp GCTTCAGGAGGACGCCAGCCGCGGAGGGTAGAGCTGGGCCACTCCTaGCCATGGCTGGTGCCGTGGTGGGTAAGGTGGGCGCCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ASGGRQPRRVELGHS*PWLVPWWVRWAPEG
Trigger: CCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTACCCTCCGCGGCTGGCGTCCTCCTGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp GCCAGCAGCCCCAGGCACACGCGGCGCCGACAATGCCACTCGCTCTaGCAGCAGTCCTGCCTGGTGGCCGGCTTGTTGCCCAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: ASSPRHTRRRQCHSL*QQSCLVAGLLPSTE
Trigger: CTCGGTGCTGGGCAACAAGCCGGCCACCAGGCAGGACTGCTGCCAGAGCGAGTGGCATTGTCGGCGCCGCGTGTGCCTGGGGCTGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp AGCGCGCTGACGGCTCGGATGAGACCCATGCGCCGGCGGATGGAGTaGTCCAGGTTGACCGTGCAGCGCAGCAGGCTCTGCGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SALTARMRPMRRRME*SRLTVQRSRLCASA
Trigger: GGCCGAGGCGCAGAGCCTGCTGCGCTGCACGGTCAACCTGGACCACTCCATCCGCCGGCGCATGGGTCTCATCCGAGCCGTCAGCGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp GAGCTGGGCCACTCCTGGCCATGGCTGGTGCCGTGGTGGGTAAGGTaGGCGCCTGAGGGGCGCTGGCAGGTTCCTTGGGGACAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ELGHSWPWLVPWWVR*APEGRWQVPWGQWR
Trigger: CCTCCACTGTCCCCAAGGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp CGGAGGGTAGAGCTGGGCCACTCCTGGCCATGGCTGGTGCCGTGGTaGGTAAGGTGGGCGCCTGAGGGGCGCTGGCAGGTTCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RRVELGHSWPWLVPW*VRWAPEGRWQVPWG
Trigger: TCCCCAAGGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTACCCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS TCA 90 bp CCACTCCTGGCCATGGCTGGTGCCGTGGTGGGTAAGGTGGGCGCCTaGGGGGCGCTGGCAGGTTCCTTGGGGACAGTGGAGGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: PLLAMAGAVVGKVGA*GALAGSLGTVEVAG
Trigger: GCCTGCAACCTCCACTGTCCCCAAGGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp ACCTCGGTGATGATGGGCTGCAGGAACACCAGGTACCACAGTAGCTaGGGGACGCCCCAGCCGCTCACGGCACGCGGCCGCCACTGCACG +
Preference number: 5 (lower is better)
Translates to: TSVMMGCRNTRYHSS*GTPQPLTARGRHCT
Trigger: CGTGCAGTGGCGGCCGCGTGCCGTGAGCGGCTGGGGCGTCCCGCAGCTACTGTGGTACCTGGTGTTCCTGCAGCCCATCATCACCGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp CCTGGACGGAAGAGCGCACAGGCCACCGGCCATAGCTTGCCCCTGTaGGCCAAGTCCCCAGTGTGGTGGCCTTCGCCGGCTTGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PGRKSAQATGHSLPL*AKSPVWWPSPACPE
Trigger: CTCAGGGCAAGCCGGCGAAGGCCACCACACTGGGGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGGCCTGTGCGCTCTTCCGTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGACGGCACGGCCACTGGTaGGCGAGCACCACCCACGCC +
Preference number: 5 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGRHGHW*ASTTHA
Trigger: GGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCG...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GTTGCTCCCCAGGGCCTCAAGGATCCCGGATCAAGTGGGCAGATGGGGGAAGGGAGGCCGGCCCACAGCTaGTCGGTGCCCGCGTACTGC +
Preference number: 5 (lower is better)
Translates to: VAPQGLKDPGSSGQMGEGRPAHS*SVPAYC
Trigger: GCAGTACGCGGGCACCGACAAGCTGTGGGCCGGCCT...CCCTTCCCCCATCTGCCCACTTGATCCGGGATCCTTGAGGCCCTGGGGAGCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCACCCGGCAGCCACGGCTaGCGCGTCATCTCGCGGTAC +
Preference number: 5 (lower is better)
Translates to: SVLALVAPAGTHLELGQAPGSHG*RVISRY
Trigger: GTACCGCGAGATGACGCGCAAGCCGTGGCTGCCGGG...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTGCCCTGGAGGCGCTGTaGGCCCGGTGGGCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPALEAL*ARWAAW
Trigger: CCACGCTGCCCACCGGGCCAACAGCGCCTCCAGGGC...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS TCA 90 bp AGTCCTGCCTGGTGGCCGGCTTGTTGCCCAGCACCGAGTACACGCTaGAGGGCAGTGCGCCATAGTGGCGGCGGATGCCCTCGCACAACG +
Preference number: 5 (lower is better)
Translates to: SPAWWPACCPAPSTR*RAVRHSGGGCPRTT
Trigger: CGTTGTGCGAGGGCATCCGCCGCCACTATGGCGCACTGCCCTTCAGCGTGTACTCGGTGCTGGGCAACAAGCCGGCCACCAGGCAGGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS TCA 90 bp TGCGCTGGCTTACGAACAGGTGCTTGCCCACCGAGTACACGGCCATaGGCAGCCCCGAGCCCGACAGTGTGGTGGCCGCGCCGCCAAACA +
Preference number: 5 (lower is better)
Translates to: CAGLRTGACPPSTRP*AAPSPTVWWPRRQT
Trigger: TGTTTGGCGGCGCGGCCACCACACTGTCGGGCTCGGGGCTGCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp TGGATTGCCCTGGACGGAAGAGCGCACAGGCCACCGGCCATAGCTTaGCCCTGTGGGCCAAGTCCCCAGTGTGGTGGCCTTCGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: WIALDGRAHRPPAIA*PCGPSPQCGGLRRL
Trigger: AAGCCGGCGAAGGCCACCACACTGGGGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGGCCTGTGCGCTCTTCCGTCCAGGGCAATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp CCGTGGTGGGTAAGGTGGGCGCCTGAGGGGCGCTGGCAGGTTCCTTaGGGACAGTGGAGGTTGCAGGCAGCCCCTTCTGGGCTTCGTGAA +
Preference number: 5 (lower is better)
Translates to: PWWVRWAPEGRWQVP*GQWRLQAAPSGLRE
Trigger: TTCACGAAGCCCAGAAGGGGCTGCCTGCAACCTCCACTGTCCCCAAGGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp CCCTTGCCTCCTGCTGCCCGCCAAGTCCTCCATTTAAGGCCCACCTaGGCTGGATTGCCCTGGACGGAAGAGCGCACAGGCCACCGGCCA +
Preference number: 5 (lower is better)
Translates to: PLPPAARQVLHLRPT*AGLPWTEERTGHRP
Trigger: TGGCCGGTGGCCTGTGCGCTCTTCCGTCCAGGGCAATCCAGCCCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCAGCAGGAGGCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp CGCGACACCAGCCGCTCGATCTTCTTGCGCTGGCTTACGAACAGGTaGTTGCCCACCGAGTACACGGCCATGAGCAGCCCCGAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: RDTSRSIFLRWLTNR*LPTEYTAMSSPEPD
Trigger: GTCGGGCTCGGGGCTGCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp CACGGCTTGCGCGTCATCTCGCGGTACAACAGGTCGTCGCGGCTCTaGACCGCATCGTGCAGGAACTGCAGCTTGGTGCGGCGGCCCATA +
Preference number: 5 (lower is better)
Translates to: HGLRVISRYNRSSRL*TASCRNCSLVRRPI
Trigger: TATGGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCTGTTGTACCGCGAGATGACGCGCAAGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp TCGCCGTCCAGGTCGAGCACGTTCTGCAACGCCTTGGTCATGGTGTaGAGCTCGCGGCTGTTGTCGCGGAAAACGTCCCAGAGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: SPSRSSTFCNALVMV*SSRLLSRKTSQRRA
Trigger: CGCGCGCCTCTGGGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp AAGCGCTCGAAGAGCTCGGGGTCGCCGTCCAGGTCGAGCACGTTCTaGAACGCCTTGGTCATGGTGTGCAGCTCGCGGCTGTTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: KRSKSSGSPSRSSTF*NALVMVCSSRLLSR
Trigger: CCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCCCGAGCTCTTCGAGCGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp CGGGGTCGCCGTCCAGGTCGAGCACGTTCTGCAACGCCTTGGTCATaGTGTGCAGCTCGCGGCTGTTGTCGCGGAAAACGTCCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RGRRPGRARSATPWS*CAARGCCRGKRPRG
Trigger: GCCTCTGGGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp GCCTCCTGCTGCCCGCCAAGTCCTCCATTTAAGGCCCACCTGGGCTaGATTGCCCTGGACGGAAGAGCGCACAGGCCACCGGCCATAGCT +
Preference number: 5 (lower is better)
Translates to: ASCCPPSPPFKAHLG*IALDGRAHRPPAIA
Trigger: AGCTATGGCCGGTGGCCTGTGCGCTCTTCCGTCCAGGGCAATCCAGCCCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCAGCAGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCACTGGTGGCCGGCTTGTaGCCCAGCACCGAGTACACG +
Preference number: 5 (lower is better)
Translates to: SVLALVAPAGTHLELGQALVAGL*PSTEYT
Trigger: CGTGTACTCGGTGCTGGGCAACAAGCCGGCCACCAG...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp AGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACCCTGCCGGCACACACTaGGAACTGGGCCAGGCACCC +
Preference number: 5 (lower is better)
Translates to: SLIPGYVQCWPLWPLPAHPAGTH*ELGQAP
Trigger: GGGTGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGG...GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATACCCTGGGATGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp CGGTACAACAGGTCGTCGCGGCTCTGCACCGCATCGTGCAGGAACTaGAGCTTGGTGCGGCGGCCCATAATGGGCACAGAGAAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RYNRSSRLCTASCRN*SLVRRPIMGTEKGS
Trigger: GCTGCCCTTCTCTGTGCCCATTATGGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCTGTTGTACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp GCCAGGATGCTGGGGTCCACGACCAGGATGAAGATGAAGGGCGCGTaGCTGTCGGACAGCAGCGTGTTGATGGCGTTGAGCACGCCCACC +
Preference number: 5 (lower is better)
Translates to: ARMLGSTTRMKMKGA*LSDSSVLMALSTPT
Trigger: GGTGGGCGTGCTCAACGCCATCAACACGCTGCTGTCCGACAGCCACGCGCCCTTCATCTTCATCCTGGTCGTGGACCCCAGCATCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 90 bp AGAGCTCGGGGTCGCCGTCCAGGTCGAGCACGTTCTGCAACGCCTTaGTCATGGTGTGCAGCTCGCGGCTGTTGTCGCGGAAAACGTCCC +
Preference number: 5 (lower is better)
Translates to: RARGRRPGRARSATP*SWCAARGCCRGKRP
Trigger: GGGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCCCGAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp CTGGACCCAGGCCCCTTTGAAGCTCTTAGGGCTCTGTTGCTCCCCAGGGCCTCAGCCGTGCCCTTCATGTaGCCCGCGCTCTCTAGGCAC +
Preference number: 5 (lower is better)
Translates to: LDPGPFEALRALLLPRASAVPFM*PALSRH
Trigger: GTGCCTAGAGAGCGCGGGCAACATGAAGGGCACGGC...TGAGGCCCTGGGGAGCAACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTGTTCAGTGTTGGCCCTaGTGGCCCCTGCCGGCACAC +
Preference number: 5 (lower is better)
Translates to: LWPENSGAAARPGCYAQPVQCWP*WPLPAH
Trigger: GTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAAC...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp AACGTGGTCACCAGGCCGGCCCACAGCTTGTCGGTGCCCGCGTACTaGCAGGCGCTAAAGCGGATGAAAAGGAACTGCACGTTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: NVVTRPAHSLSVPAY*QALKRMKRNCTFLR
Trigger: GCGCAGGAACGTGCAGTTCCTTTTCATCCGCTTTAGCGCCTGGCAGTACGCGGGCACCGACAAGCTGTGGGCCGGCCTGGTGACCACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp GTCATCTCGCGGTACAACAGGTCGTCGCGGCTCTGCACCGCATCGTaGAGGAACTGCAGCTTGGTGCGGCGGCCCATAATGGGCACAGAG +
Preference number: 5 (lower is better)
Translates to: VISRYNRSSRLCTAS*RNCSLVRRPIMGTE
Trigger: CTCTGTGCCCATTATGGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCTGTTGTACCGCGAGATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp TACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCCCAGCCCCGCGCCGCCAAACACCTaGAGCAGGCTGCCGCTCGGG +
Preference number: 5 (lower is better)
Translates to: YQLSQSRNGKQHLCLPSPAPPNT*SRLPLG
Trigger: CCCGAGCGGCAGCCTGCTCAAGGTGTTTGGCGGCGC...GGGGCTGGGCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTATGGAGTGGTCCAGGTaGACCGTGCAGCGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LWPENSGAAARPGCYAQPMEWSR*TVQRSR
Trigger: CCTGCTGCGCTGCACGGTCAACCTGGACCACTCCAT...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCCCTGGGCGCTCCATGTaGCCTGAGTCAACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSPGRSM*PESTWP
Trigger: GGGCCAGGTTGACTCAGGCAACATGGAGCGCCCAGG...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp CGGTCACAGGGACCGGCACGTGGCAGAGTGTCTTGGCCAGGCAGCTaGAGTAGACGTCATCCTCTGTCAGGATGTCGGAGCTGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: RSQGPARGRVSWPGS*SRRHPLSGCRSCRQ
Trigger: CTGCCTACAGCTCCGACATCCTGACAGAGGATGACGTCTACTGCAGCTGCCTGGCCAAGACACTCTGCCACGTGCCGGTCCCTGTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCAAAACAGCACCTCTGCTaGCCCAGCCCCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SVLALVAPAGTHLELGQAKQHLC*PSPRED
Trigger: ATCTTCCCTGGGGCTGGGCAAGCAGAGGTGCTGTTT...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CTGGGTTGCGGCCCCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGACAGGGCTTCACCATGTaGGCCAGGCTGATGCAGCTT +
Preference number: 5 (lower is better)
Translates to: LGCGPSPAPYSPIWADGGQGFTM*ARLMQL
Trigger: AAGCTGCATCAGCCTGGCCAACATGGTGAAGCCCTG...TCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGGGGCCGCAACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTTGCAGTGGCACCATCTaGGCTCCAGCCACCACCTCC +
Preference number: 5 (lower is better)
Translates to: PVQPPILPSGQMEEPLPPCSGTI*APATTS
Trigger: GGAGGTGGTGGCTGGAGCCAAGATGGTGCCACTGCA...AGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp TCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGGCATGGACCCAGGCCCCTTaGAAGCTCTTAGGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: SVLALVAPAGTHLELGQAWTQAP*KLLGLC
Trigger: ACAGAGCCCTAAGAGCTTCAAAGGGGCCTGGGTCCA...TGCCTGGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp GCTGGCTGCCGAACTTTTCACGCGACACCAGCCGCTCGATCTTCTTaGGCTGGCTTACGAACAGGTGCTTGCCCACCGAGTACACGGCCA +
Preference number: 5 (lower is better)
Translates to: AGCRTFHATPAARSS*AGLRTGACPPSTRP
Trigger: TGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAAGTTCGGCAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 90 bp CCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTGCTaGCCGCCAAGTCCTCCATTTAAGGCCCACCTGGGCTGGATTGCC +
Preference number: 5 (lower is better)
Translates to: PYSPIWADGGTLASC*PPSPPFKAHLGWIA
Trigger: GGCAATCCAGCCCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CTGTGGCCAGAGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTCGCGGTGGTCCAATTaGGGGAGAGGCTCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: LWPENSGAAARPGCYAQPSRWSN*GRGSAN
Trigger: GTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCGA...AGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCTCTGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CATTACGTTGAGAATGGAGCCACCCTAGGGGTGGAGCAGCTTGCTGAGGTCACCTGGGGACAGTGGAGGTaGCAGGCAGCCCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: HYVENGATLGVEQLAEVTWGQWR*QAAPSG
Trigger: CCCAGAAGGGGCTGCCTGCAACCTCCACTGTCCCCA...GGTGACCTCAGCAAGCTGCTCCACCCCTAGGGTGGCTCCATTCTCAACGTAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTGCGCTGGCAGGTTCCTaGGGGACAGTGGAGGTTGCA +
Preference number: 5 (lower is better)
Translates to: GSEATPSASSQGMFSVGPALAGS*GTVEVA
Trigger: TGCAACCTCCACTGTCCCCAAGGAACCTGCCAGCGC...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTTGCAGCTCGCGGCTGTaGTCGCGGAAAACGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GSEATPSASSQGMFSVGPCSSRL*SRKTSQ
Trigger: CTGGGACGTTTTCCGCGACAACAGCCGCGAGCTGCA...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGCAGATGGAGGAACCCTaGCCTCCTGCTGCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGQMEEP*PPAARQ
Trigger: TTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTG...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTACATTCGGACCCTGGGTaGCGGCCCCAGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLHSDPG*RPQSSP
Trigger: GGGGCTGGACTGGGGCCGCAACCCAGGGTCCGAATG...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp CAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGCATGCTGGCACCGGCTaGTGGCCGCACTCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: QLPGGPGVSYQLSQSRNGHAGTG*WPHSLE
Trigger: TTCCAAGGAGTGCGGCCACAAGCCGGTGCCAGCATG...CCCATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp CATAGAAACCCACGGTCACAGGGACCGGCACGTGGCAGAGTGTCTTaGCCAGGCAGCTGCAGTAGACGTCATCCTCTGTCAGGATGTCGG +
Preference number: 5 (lower is better)
Translates to: HRNPRSQGPARGRVS*PGSCSRRHPLSGCR
Trigger: CCGACATCCTGACAGAGGATGACGTCTACTGCAGCTGCCTGGCCAAGACACTCTGCCACGTGCCGGTCCCTGTGACCGTGGGTTTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp CTGCCGAACTTTTCACGCGACACCAGCCGCTCGATCTTCTTGCGCTaGCTTACGAACAGGTGCTTGCCCACCGAGTACACGGCCATGAGC +
Preference number: 5 (lower is better)
Translates to: LPNFSRDTSRSIFLR*LTNRCLPTEYTAMS
Trigger: GCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAAGTTCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp TATGTTCAGTGTTGGCCCTTGTGGCCCCTGCCGGCACACACTTGGAACTGGGCCAGCCGCTCGATCTTCTaGCGCTGGCTTACGAACAGG +
Preference number: 5 (lower is better)
Translates to: YVQCWPLWPLPAHTWNWASRSIF*RWLTNR
Trigger: CCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCT...GGCCCAGTTCCAAGTGTGTGCCGGCAGGGGCCACAAGGGCCAACACTGAACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAGCCACCGGCCATAGCTaGCCCCTGTGGGCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLATGHS*PLWAKS
Trigger: GGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGGC...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTACCCACCTGGGCTGGATaGCCCTGGACGGAAGAGCGC +
Preference number: 5 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLPTWAG*PWTEER
Trigger: GCGCTCTTCCGTCCAGGGCAATCCAGCCCAGGTGGG...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCAGGTACCCTGTGGACAGTTATTTGTCTGGGGGAGGTTAGTGCCACCCACTCCCTGGCTGGCTGTGGCTaGGGCCCTGTATGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: AGTLWTVICLGEVSATHSLAGCG*GPVCPH
Trigger: ATGGGGACATACAGGGCCCAAGCCACAGCCAGCCAG...GGAGTGGGTGGCACTAACCTCCCCCAGACAAATAACTGTCCACAGGGTACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GGCTCAGAAGCCACACCCTCAGCCTCATCCCAGGGTATGTTCAGTGTTGGCCCTAGGGTATGTTCAGTGTaGGCCCTTGTGGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GSEATPSASSQGMFSVGPRVCSV*ALVAPA
Trigger: GGCAGGGGCCACAAGGGCCAACACTGAACATACCCT...AGGGCCAACACTGAACATACCCTGGGATGAGGCTGAGGGTGTGGCTTCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 90 bp GCGCTAAAGCGGATGAAAAGGAACTGCACGTTCCTGCGCCGCAGGTaGACCTCGGTGATGATGGGCTGCAGGAACACCAGGTACCACAGT +
Preference number: 5 (lower is better)
Translates to: ALKRMKRNCTFLRRR*TSVMMGCRNTRYHS
Trigger: ACTGTGGTACCTGGTGTTCCTGCAGCCCATCATCACCGAGGTGCACCTGCGGCGCAGGAACGTGCAGTTCCTTTTCATCCGCTTTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp AAACAGCTCCCAGGAGGTCCAGGCGTATCCTACCAGCTTAGTCAGTCCAGGAATGCCACTGCCACCCACTaGGTGGCTGTGGTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: KQLPGGPGVSYQLSQSRNATATH*VAVVGQ
Trigger: CTGGCCTACCACAGCCACCAAGTGGGTGGCAGTGGC...ATTCCTGGACTGACTAAGCTGGTAGGATACGCCTGGACCTCCTGGGAGCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTAAGCGTGTTGATGGCGTaGAGCACGCCCACCACGCGC +
Preference number: 5 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLSVLMA*STPTTR
Trigger: GCGCGTGGTGGGCGTGCTCAACGCCATCAACACGCT...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCTGCTCCCTGACTCATaGCTGGGAAAGGCGCACAGG +
Preference number: 5 (lower is better)
Translates to: ETDLTVSRGPILLPLRPALLPDS*LGKAHR
Trigger: CCTGTGCGCCTTTCCCAGCAATGAGTCAGGGAGCAG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp CGCGGTGGTCCAATTTGGGGAGAGGCTCAGCAAACTCGGGCAAGATaGGTGTACCGCGTTTCCAATGTGAAGAGCCGAAAGCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: RGGPIWGEAQQTRAR*VYRVSNVKSRKQDR
Trigger: CCTGTCCTGCTTTCGGCTCTTCACATTGGAAACGCGGTACACCCATCTTGCCCGAGTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp GTGAGCAGCTCCACCTCCTTCTTCACCTCGCACATGAAACCCAGCTaGCTGCCGAACTTTTCACGCGACACCAGCCGCTCGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VSSSTSFFTSHMKPS*LPNFSRDTSRSIFL
Trigger: CAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAAGTTCGGCAGCCAGCTGGGTTTCATGTGCGAGGTGAAGAAGGAGGTGGAGCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS-3UTR CAA 90 bp ACCTGGATGCTATGCCCAGCCTTGGAACTAAAGAACTGTGAGGTCAGTGACCCACTTACGAACAGGTGCTaGCCCACCGAGTACACGGCC +
Preference number: 5 (lower is better)
Translates to: TWMLCPALELKNCEVSDPLTNRC*PTEYTA
Trigger: GGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAG...TGGGTCACTGACCTCACAGTTCTTTAGTTCCAAGGCTGGGCATAGCATCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCGTATCCTACCAGCTTAGTCAGTCCAGGAATGGGAAACAGCACCTCTGCTTGCTTGTGGCCGCACTCCTaGGAAGCTATGTCCACGGCT +
Preference number: 5 (lower is better)
Translates to: AYPTSLVSPGMGNSTSACLWPHS*EAMSTA
Trigger: AGCCGTGGACATAGCTTCCAAGGAGTGCGGCCACAA...GCAAGCAGAGGTGCTGTTTCCCATTCCTGGACTGACTAAGCTGGTAGGATACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp TGGTCCCTGGTCAGATCAGGATGCGGAGAGCAACTCCGGGCTCTCAACACCTCCGGCTACAGGGATATATaGACCCCAACCACACATCTA +
Preference number: 5 (lower is better)
Translates to: WSLVRSGCGEQLRALNTSGYRDI*TPTTHL
Trigger: TAGATGTGTGGTTGGGGTCAATATATCCCTGTAGCC...GGAGGTGTTGAGAGCCCGGAGTTGCTCTCCGCATCCTGATCTGACCAGGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 90 bp ATGATACGGTGGAGGGGGAATTGTGAGGGAGCAATGAAATCGCGGTaGTCCAATTTGGGGAGAGGCTCAGCAAACTCGGGCAAGATGGGT +
Preference number: 5 (lower is better)
Translates to: MIRWRGNCEGAMKSR*SNLGRGSANSGKMG
Trigger: ACCCATCTTGCCCGAGTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCGATTTCATTGCTCCCTCACAATTCCCCCTCCACCGTATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GAAACAGACTTAACGGTGTCACGAGGCCCCATCCTTCTCCCTCTGAGGCCAGCTCGTGTGGCTGAACATTaGACCAGTGAGGAATCAGGA +
Preference number: 5 (lower is better)
Translates to: ETDLTVSRGPILLPLRPARVAEH*TSEESG
Trigger: TCCTGATTCCTCACTGGTCAAATGTTCAGCCACACG...AGCTGGCCTCAGAGGGAGAAGGATGGGGCCTCGTGACACCGTTAAGTCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp AGAACTCCGGTGCTGCAGCCAGACCTGGATGCTATGCCCAGCCTTGGAACTAAAACAGTGACCAACAGTTaGGCCACAGCTTGTACCACG +
Preference number: 5 (lower is better)
Translates to: RTPVLQPDLDAMPSLGTKTVTNS*ATACTT
Trigger: CGTGGTACAAGCTGTGGCCAAACTGTTGGTCACTGT...TTTAGTTCCAAGGCTGGGCATAGCATCCAGGTCTGGCTGCAGCACCGGAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp GCAGGCAGCTCTTCACCAAGTTATTCCTGGACCCAGGCCCCTTTGAAGCTCTTACAGTTTGGCCACAGCTaGTACCACGTAACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AGSSSPSYSWTQAPLKLLQFGHS*YHVTEA
Trigger: AGCCTCTGTTACGTGGTACAAGCTGTGGCCAAACTG...TAAGAGCTTCAAAGGGGCCTGGGTCCAGGAATAACTTGGTGAAGAGCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAGTGATGGGCACGGTGTaGACGATGCGCCGCATGGAC +
Preference number: 5 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQVMGTV*TMRRMD
Trigger: GTCCATGCGGCGCATCGTCAACACCGTGCCCATCAC...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAATCAGCGCCGTGATCTaGTCCAGCATCATGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQISAVI*SSIMCR
Trigger: CCTGCACATGATGCTGGACAAGATCACGGCGCTGAT...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS-3UTR CAA 90 bp AGGAGTGAAAATTTATTTTCAGCTTGGATTCCAGGTGGTAAGAAACAAACCCAAAGCCGTGCTCCTTTTTaGTTCGTGACAACGGTCCCG +
Preference number: 5 (lower is better)
Translates to: RSENLFSAWIPGGKKQTQSRAPF*FVTTVP
Trigger: CGGGACCGTTGTCACGAACAAAAAAGGAGCACGGCT...TTGGGTTTGTTTCTTACCACCTGGAATCCAAGCTGAAAATAAATTTTCACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 72 bp CCCCAGCCGCTCACGGCACGCGGCCGCCACTGCACGTaGTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PQPLTARGRHCT*CSSSLSRCAAS
Trigger: GGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCGGCCGCGTGCCGTGAGCGGCTGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp TCCTCCAGGCACTGCAGCGCCCAGCTCAGGCGGCACGGCCACTGGTaGGCGAGCACCACCCACGCCACCGCCTGGCGCGGCGTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SSRHCSAQLRRHGHW*ASTTHATAWRGVGP
Trigger: GGGCCCCACGCCGCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGTGCCTGGAGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp AGCAGCCCCGAGCCCGACAGTGTGGTGGCCGCGCCGCCAAACACCTaGAGCAGGCTGCCGCTCGGGCTGCCGTGGCCCAGCGCGTGGCCG +
Preference number: 6 (lower is better)
Translates to: SSPEPDSVVAAPPNT*SRLPLGLPWPSAWP
Trigger: CGGCCACGCGCTGGGCCACGGCAGCCCGAGCGGCAGCCTGCTCAAGGTGTTTGGCGGCGCGGCCACCACACTGTCGGGCTCGGGGCTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp CAGCCGCTCACGGCACGCGGCCGCCACTGCACGTGCTaGAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: QPLTARGRHCTC*SSSLSRCAASC
Trigger: GCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCACGTGCAGTGGCGGCCGCGTGCCGTGAGCGGCTG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp GGCGCGCCCCCGGTCTGCTGCCGGTCCTCCAGGCACTaGAGCGCCCAGCTCAGGCGGCACGGCCACTGGTTG +
Preference number: 6 (lower is better)
Translates to: GAPPVCCRSSRH*SAQLRRHGHWL
Trigger: CAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGTGCCTGGAGGACCGGCAGCAGACCGGGGGCGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp ACTGCAGCGCCCAGCTCAGGCGGCACGGCCACTGGTTaGCGAGCACCACCCACGCCACCGCCTGGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: TAAPSSGGTATG*RAPPTPPPGAA
Trigger: CGCCGCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp GGCGCCCTGGAGGCGCTGTTGGCCCGGTGGGCAGCGTaGGGGGTATCGCGGGTAGGGGACTTGGGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: GALEALLARWAA*GVSRVGDLGGL
Trigger: CAGCCCGCCCAAGTCCCCTACCCGCGATACCCCCCACGCTGCCCACCGGGCCAACAGCGCCTCCAGGGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS TCA 72 bp CAAGTCCCCAGTGTGGTGGCCTTCGCCGGCTTGCCCTaGGGCACGGCCCGACGGGGGCGCCCTGGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: QVPSVVAFAGLP*GTARRGRPGGA
Trigger: AGCGCCTCCAGGGCGCCCCCGTCGGGCCGTGCCTCAGGGCAAGCCGGCGAAGGCCACCACACTGGGGACTTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp CGCTCTCGCCCCCGGCGTCCCCCGGCAGCCACGGCTTaGGCGTCATCTCGCGGTACAACAGGTCGTCGCGGC +
Preference number: 6 (lower is better)
Translates to: RSRPRRPPAATA*ASSRGTTGRRG
Trigger: GCCGCGACGACCTGTTGTACCGCGAGATGACGCGCAAGCCGTGGCTGCCGGGGGACGCCGGGGGCGAGAGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp TGGGCCAAGTCCCCAGTGTGGTGGCCTTCGCCGGCTTaGCCTGAGGCACGGCCCGACGGGGGCGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: WAKSPVWWPSPA*PEARPDGGALE
Trigger: CTCCAGGGCGCCCCCGTCGGGCCGTGCCTCAGGGCAAGCCGGCGAAGGCCACCACACTGGGGACTTGGCCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp TGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTGCTaGATCAGCGCTGCGGGAAGGGAGCCCGGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: CSSSLSRCAASC*ISAAGREPGSR
Trigger: GCGGCTCCCGGGCTCCCTTCCCGCAGCGCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589776.1
CDS CCA 72 bp CTGGGGCGGGCAGGGGCCGGGCATCAGTGGGCTCGCTaGGCTTCAGGAGGACGCCAGCCGCGGAGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: LGRAGAGHQWAR*ASGGRQPRRVE
Trigger: CTCTACCCTCCGCGGCTGGCGTCCTCCTGAAGCCCAGCGAGCCCACTGATGCCCGGCCCCTGCCCGCCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp TGGCGAGCACCACCCACGCCACCGCCTGGCGCGGCGTaGGGCCCCCAAAGTCCCCCTGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: WRAPPTPPPGAA*GPQSPPAAAAA
Trigger: AGCAGCAGCAGCAGCAGGGGGACTTTGGGGGCCCCACGCCGCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp AGGCACTGCAGCGCCCAGCTCAGGCGGCACGGCCACTaGTTGGCGAGCACCACCCACGCCACCGCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: RHCSAQLRRHGH*LASTTHATAWR
Trigger: GCGCCAGGCGGTGGCGTGGGTGGTGCTCGCCAACCAGTGGCCGTGCCGCCTGAGCTGGGCGCTGCAGTGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS TCA 72 bp CCACCACGCGCTCCGGGTAGCACGTGTCCAGCCCGGTaGCCTCCAGCACCACGCGCAGCCTGCGCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: PPRAPGSTCPAR*PPAPRAACAAG
Trigger: ACCAGCGGCGCAGGCTGCGCGTGGTGCTGGAGGTCACCGGGCTGGACACGTGCTACCCGGAGCGCGTGGTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp TGCTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTaGTGCATCAGCGCTGCGGGAAGGGAGCCCGGGAGC +
Preference number: 6 (lower is better)
Translates to: CCSSSLSRCAAS*CISAAGREPGS
Trigger: GCTCCCGGGCTCCCTTCCCGCAGCGCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589776.1
CDS CAA 72 bp GAGCCCGACAGTGTGGTGGCCGCGCCGCCAAACACCTaGAGCAGGCTGCCGCTCGGGCTGCCGTGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: EPDSVVAAPPNT*SRLPLGLPWPS
Trigger: GCTGGGCCACGGCAGCCCGAGCGGCAGCCTGCTCAAGGTGTTTGGCGGCGCGGCCACCACACTGTCGGGCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp AGCAGCTGCGCGCTCTCGCCCCCGGCGTCCCCCGGCAGCCACGGCTaGCGCGTCATCTCGCGGTACAACAGGTCGTCGCGGCTCTGCACC +
Preference number: 6 (lower is better)
Translates to: SSCALSPPASPGSHG*RVISRYNRSSRLCT
Trigger: GGTGCAGAGCCGCGACGACCTGTTGTACCGCGAGATGACGCGCAAGCCGTGGCTGCCGGGGGACGCCGGGGGCGAGAGCGCGCAGCTGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp AGCGCCAGCAGCCCCAGGCACACGCGGCGCCGACAATaGCACTCGCTCTGGCAGCAGTCCTGCCTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SASSPRHTRRRQ*HSLWQQSCLVA
Trigger: GGCCACCAGGCAGGACTGCTGCCAGAGCGAGTGGCATTGTCGGCGCCGCGTGTGCCTGGGGCTGCTGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp GGACGCCAGCCGCGGAGGGTAGAGCTGGGCCACTCCTaGCCATGGCTGGTGCCGTGGTGGGTAAGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GRQPRRVELGHS*PWLVPWWVRWA
Trigger: CGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTACCCTCCGCGGCTGGCGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS TCA 72 bp CCGTGCAGCGCAGCAGGCTCTGCGCCTCGGCCACGGTaGAGGGGAAGTCGGCGCCCAGGAAGCGCTCGAAGA +
Preference number: 6 (lower is better)
Translates to: PCSAAGSAPRPR*RGSRRPGSARR
Trigger: TCTTCGAGCGCTTCCTGGGCGCCGACTTCCCCTTCACCGTGGCCGAGGCGCAGAGCCTGCTGCGCTGCACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp GTAGAGCTGGGCCACTCCTGGCCATGGCTGGTGCCGTaGTGGGTAAGGTGGGCGCCTGAGGGGCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: VELGHSWPWLVP*WVRWAPEGRWQ
Trigger: CTGCCAGCGCCCCTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp CAGCCGCGGAGGGTAGAGCTGGGCCACTCCTGGCCATaGCTGGTGCCGTGGTGGGTAAGGTGGGCGCCTGAG +
Preference number: 6 (lower is better)
Translates to: QPRRVELGHSWP*LVPWWVRWAPE
Trigger: CTCAGGCGCCCACCTTACCCACCACGGCACCAGCCATGGCCAGGAGTGGCCCAGCTCTACCCTCCGCGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp GTGCGCCATAGTGGCGGCGGATGCCCTCGCACAACGTaGTCACCAGGCCGGCCCACAGCTTGTCGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: VRHSGGGCPRTT*SPGRPTACRCP
Trigger: CGGGCACCGACAAGCTGTGGGCCGGCCTGGTGACCACGTTGTGCGAGGGCATCCGCCGCCACTATGGCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp AGCACGTTCTGCAACGCCTTGGTCATGGTGTGCAGCTCGCGGCTGTaGTCGCGGAAAACGTCCCAGAGGCGCGCGCGGCCCTCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: STFCNALVMVCSSRL*SRKTSQRRARPSGA
Trigger: CGCGCCCGAGGGCCGCGCGCGCCTCTGGGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp ACGGCTCGGATGAGACCCATGCGCCGGCGGATGGAGTGGTCCAGGTaGACCGTGCAGCGCAGCAGGCTCTGCGCCTCGGCCACGGTGAAG +
Preference number: 6 (lower is better)
Translates to: TARMRPMRRRMEWSR*TVQRSRLCASATVK
Trigger: CTTCACCGTGGCCGAGGCGCAGAGCCTGCTGCGCTGCACGGTCAACCTGGACCACTCCATCCGCCGGCGCATGGGTCTCATCCGAGCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp CCCTCGCACAACGTGGTCACCAGGCCGGCCCACAGCTaGTCGGTGCCCGCGTACTGCCAGGCGCTAAAGCGG +
Preference number: 6 (lower is better)
Translates to: PSHNVVTRPAHS*SVPAYCQALKR
Trigger: CCGCTTTAGCGCCTGGCAGTACGCGGGCACCGACAAGCTGTGGGCCGGCCTGGTGACCACGTTGTGCGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp ATGAGACCCATGCGCCGGCGGATGGAGTGGTCCAGGTaGACCGTGCAGCGCAGCAGGCTCTGCGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: MRPMRRRMEWSR*TVQRSRLCASA
Trigger: GGCCGAGGCGCAGAGCCTGCTGCGCTGCACGGTCAACCTGGACCACTCCATCCGCCGGCGCATGGGTCTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp CTGGATTGCCCTGGACGGAAGAGCGCACAGGCCACCGGCCATAGCTaGCCCCTGTGGGCCAAGTCCCCAGTGTGGTGGCCTTCGCCGGCT +
Preference number: 6 (lower is better)
Translates to: LDCPGRKSAQATGHS*PLWAKSPVWWPSPA
Trigger: AGCCGGCGAAGGCCACCACACTGGGGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGGCCTGTGCGCTCTTCCGTCCAGGGCAATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp GTAAGGTGGGCGCCTGAGGGGCGCTGGCAGGTTCCTTaGGGACAGTGGAGGTTGCAGGCAGCCCCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: VRWAPEGRWQVP*GQWRLQAAPSG
Trigger: CCCAGAAGGGGCTGCCTGCAACCTCCACTGTCCCCAAGGAACCTGCCAGCGCCCCTCAGGCGCCCACCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp ACGGCTCGGATGAGACCCATGCGCCGGCGGATGGAGTaGTCCAGGTTGACCGTGCAGCGCAGCAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: TARMRPMRRRME*SRLTVQRSRLC
Trigger: GCAGAGCCTGCTGCGCTGCACGGTCAACCTGGACCACTCCATCCGCCGGCGCATGGGTCTCATCCGAGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp TGCAACGCCTTGGTCATGGTGTGCAGCTCGCGGCTGTaGTCGCGGAAAACGTCCCAGAGGCGCGCGCGGCCC +
Preference number: 6 (lower is better)
Translates to: CNALVMVCSSRL*SRKTSQRRARP
Trigger: GGGCCGCGCGCGCCTCTGGGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp CCTGGACGGAAGAGCGCACAGGCCACCGGCCATAGCTaGCCCCTGTGGGCCAAGTCCCCAGTGTGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: PGRKSAQATGHS*PLWAKSPVWWP
Trigger: AGGCCACCACACTGGGGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGGCCTGTGCGCTCTTCCGTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp CGGCGGATGCCCTCGCACAACGTGGTCACCAGGCCGGCCCACAGCTaGTCGGTGCCCGCGTACTGCCAGGCGCTAAAGCGGATGAAAAGG +
Preference number: 6 (lower is better)
Translates to: RRMPSHNVVTRPAHS*SVPAYCQALKRMKR
Trigger: CCTTTTCATCCGCTTTAGCGCCTGGCAGTACGCGGGCACCGACAAGCTGTGGGCCGGCCTGGTGACCACGTTGTGCGAGGGCATCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS TCA 72 bp GGAAGGCCGACAGGGCCCATGGGCTCGGAGGGCCGCTaGGTCCTGGCGCCACTGATGACAGCATCCTTTTCG +
Preference number: 6 (lower is better)
Translates to: GRPTGPMGSEGR*VLAPLMTASFS
Trigger: CGAAAAGGATGCTGTCATCAGTGGCGCCAGGACTCAGCGGCCCTCCGAGCCCATGGGCCCTGTCGGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS TCA 72 bp TTACGAACAGGTGCTTGCCCACCGAGTACACGGCCATaGGCAGCCCCGAGCCCGACAGTGTGGTGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: LRTGACPPSTRP*AAPSPTVWWPR
Trigger: GCGCGGCCACCACACTGTCGGGCTCGGGGCTGCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp CTGGACGGAAGAGCGCACAGGCCACCGGCCATAGCTTaGCCCTGTGGGCCAAGTCCCCAGTGTGGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LDGRAHRPPAIA*PCGPSPQCGGL
Trigger: AAGGCCACCACACTGGGGACTTGGCCCACAGGGGCAAGCTATGGCCGGTGGCCTGTGCGCTCTTCCGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp GGGTCGCCGTCCAGGTCGAGCACGTTCTGCAACGCCTaGGTCATGGTGTGCAGCTCGCGGCTGTTGTCGCGG +
Preference number: 6 (lower is better)
Translates to: GSPSRSSTFCNA*VMVCSSRLLSR
Trigger: CCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp TGCTGCAGCTCCTCGCTCTCGCGCTGCGCGGCCTCCTaGTGCATCAGCGCCGTGATCTTGTCCAGCATCATG +
Preference number: 6 (lower is better)
Translates to: CCSSSLSRCAAS*CISAVILSSIM
Trigger: CATGATGCTGGACAAGATCACGGCGCTGATGCAGCAGGAGGCCGCGCAGCGCGAGAGCGAGGAGCTGCAGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 72 bp GGAAGAGGTAGCCGTTATCGGCCGTGCCCTTCATGTTaGCCGCGCTCTCTAGGCACGCGGCCAGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: GRGSRYRPCPSC*PRSLGTRPGCW
Trigger: CCAGCATCCTGGCCGCGTGCCTAGAGAGCGCGGGCAACATGAAGGGCACGGCCGATAACGGCTACCTCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp AGGTCGTCGCGGCTCTGCACCGCATCGTGCAGGAACTaGAGCTTGGTGCGGCGGCCCATAATGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: RSSRLCTASCRN*SLVRRPIMGTE
Trigger: CTCTGTGCCCATTATGGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp CGCGTCATCTCGCGGTACAACAGGTCGTCGCGGCTCTaGACCGCATCGTGCAGGAACTGCAGCTTGGTGCGG +
Preference number: 6 (lower is better)
Translates to: RVISRYNRSSRL*TASCRNCSLVR
Trigger: CCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCTGTTGTACCGCGAGATGACGCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp AAGAGCTCGGGGTCGCCGTCCAGGTCGAGCACGTTCTaGAACGCCTTGGTCATGGTGTGCAGCTCGCGGCTG +
Preference number: 6 (lower is better)
Translates to: KSSGSPSRSSTF*NALVMVCSSRL
Trigger: CAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCCCGAGCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp GGTCGCCGTCCAGGTCGAGCACGTTCTGCAACGCCTTaGTCATGGTGTGCAGCTCGCGGCTGTTGTCGCGGA +
Preference number: 6 (lower is better)
Translates to: GRRPGRARSATP*SWCAARGCCRG
Trigger: TCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp TGCCCGCCAAGTCCTCCATTTAAGGCCCACCTGGGCTaGATTGCCCTGGACGGAAGAGCGCACAGGCCACCG +
Preference number: 6 (lower is better)
Translates to: CPPSPPFKAHLG*IALDGRAHRPP
Trigger: CGGTGGCCTGTGCGCTCTTCCGTCCAGGGCAATCCAGCCCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp CCTGCTGCCCGCCAAGTCCTCCATTTAAGGCCCACCTaGGCTGGATTGCCCTGGACGGAAGAGCGCACAGGC +
Preference number: 6 (lower is better)
Translates to: PAARQVLHLRPT*AGLPWTEERTG
Trigger: GCCTGTGCGCTCTTCCGTCCAGGGCAATCCAGCCCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCAGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp TCGCGGCTCTGCACCGCATCGTGCAGGAACTGCAGCTaGGTGCGGCGGCCCATAATGGGCACAGAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: SRLCTASCRNCS*VRRPIMGTEKG
Trigger: GCCCTTCTCTGTGCCCATTATGGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp ACCAGGCCGGCCCACAGCTTGTCGGTGCCCGCGTACTaGCAGGCGCTAAAGCGGATGAAAAGGAACTGCACG +
Preference number: 6 (lower is better)
Translates to: TRPAHSLSVPAY*QALKRMKRNCT
Trigger: CGTGCAGTTCCTTTTCATCCGCTTTAGCGCCTGGCAGTACGCGGGCACCGACAAGCTGTGGGCCGGCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp CCCATCTGGGCAGATGGAGGAACCCTTGCCTCCTGCTaGCCGCCAAGTCCTCCATTTAAGGCCCACCTGGGC +
Preference number: 6 (lower is better)
Translates to: PIWADGGTLASC*PPSPPFKAHLG
Trigger: GCCCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CAA 90 bp GACACCAGCCGCTCGATCTTCTTGCGCTGGCTTACGAACAGGTGCTaGCCCACCGAGTACACGGCCATGAGCAGCCCCGAGCCCGACAGT +
Preference number: 6 (lower is better)
Translates to: DTSRSIFLRWLTNRC*PTEYTAMSSPEPDS
Trigger: ACTGTCGGGCTCGGGGCTGCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp AACAGGTCGTCGCGGCTCTGCACCGCATCGTGCAGGAACTGCAGCTaGGTGCGGCGGCCCATAATGGGCACAGAGAAGGGCAGCGTGACA +
Preference number: 6 (lower is better)
Translates to: NRSSRLCTASCRNCS*VRRPIMGTEKGSVT
Trigger: TGTCACGCTGCCCTTCTCTGTGCCCATTATGGGCCGCCGCACCAAGCTGCAGTTCCTGCACGATGCGGTGCAGAGCCGCGACGACCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp AAGAGCTCGGGGTCGCCGTCCAGGTCGAGCACGTTCTGCAACGCCTaGGTCATGGTGTGCAGCTCGCGGCTGTTGTCGCGGAAAACGTCC +
Preference number: 6 (lower is better)
Translates to: KSSGSPSRSSTFCNA*VMVCSSRLLSRKTS
Trigger: GGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCCCGAGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp CCAGTCCAGCCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTaGCCTCCTGCTGCCCGCCAAGTCCTCCATTTAAGGCCCACCTGG +
Preference number: 6 (lower is better)
Translates to: PVQPPILPSGQMEEP*PPAARQVLHLRPTW
Trigger: CCAGGTGGGCCTTAAATGGAGGACTTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGGCTGGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 72 bp AGCCGCTCGATCTTCTTGCGCTGGCTTACGAACAGGTaGTTGCCCACCGAGTACACGGCCATGAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SRSIFLRWLTNR*LPTEYTAMSSP
Trigger: GGGGCTGCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp CCACGGTCACAGGGACCGGCACGTGGCAGAGTGTCTTaGCCAGGCAGCTGCAGTAGACGTCATCCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: PRSQGPARGRVS*PGSCSRRHPLS
Trigger: TGACAGAGGATGACGTCTACTGCAGCTGCCTGGCCAAGACACTCTGCCACGTGCCGGTCCCTGTGACCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp CTGGGGTCCACGACCAGGATGAAGATGAAGGGCGCGTaGCTGTCGGACAGCAGCGTGTTGATGGCGTTGAGC +
Preference number: 6 (lower is better)
Translates to: LGSTTRMKMKGA*LSDSSVLMALS
Trigger: GCTCAACGCCATCAACACGCTGCTGTCCGACAGCCACGCGCCCTTCATCTTCATCCTGGTCGTGGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp CGCTCGATCTTCTTGCGCTGGCTTACGAACAGGTGCTaGCCCACCGAGTACACGGCCATGAGCAGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: RSIFLRWLTNRC*PTEYTAMSSPE
Trigger: CTCGGGGCTGCTCATGGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp AGCTGGCTGCCGAACTTTTCACGCGACACCAGCCGCTCGATCTTCTaGCGCTGGCTTACGAACAGGTGCTTGCCCACCGAGTACACGGCC +
Preference number: 6 (lower is better)
Translates to: SWLPNFSRDTSRSIF*RWLTNRCLPTEYTA
Trigger: GGCCGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAAGTTCGGCAGCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS GCA 72 bp AGGTCGAGCACGTTCTGCAACGCCTTGGTCATGGTGTaGAGCTCGCGGCTGTTGTCGCGGAAAACGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RSSTFCNALVMV*SSRLLSRKTSQ
Trigger: CTGGGACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp GGTGCCCCAACTCTGGGTCCCAGAAGTAGTGCCCGTTaGGGCTCTGGGCATCCTTGGCGAAGTGGACTTTGT +
Preference number: 6 (lower is better)
Translates to: GAPTLGPRSSAR*GSGHPWRSGLC
Trigger: ACAAAGTCCACTTCGCCAAGGATGCCCAGAGCCCCAACGGGCACTACTTCTGGGACCCAGAGTTGGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp CGTCCAGGTCGAGCACGTTCTGCAACGCCTTGGTCATaGTGTGCAGCTCGCGGCTGTTGTCGCGGAAAACGT +
Preference number: 6 (lower is better)
Translates to: RPGRARSATPWS*CAARGCCRGKR
Trigger: ACGTTTTCCGCGACAACAGCCGCGAGCTGCACACCATGACCAAGGCGTTGCAGAACGTGCTCGACCTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp TCCACCTCCTTCTTCACCTCGCACATGAAACCCAGCTaGCTGCCGAACTTTTCACGCGACACCAGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: STSFFTSHMKPS*LPNFSRDTSRS
Trigger: CGAGCGGCTGGTGTCGCGTGAAAAGTTCGGCAGCCAGCTGGGTTTCATGTGCGAGGTGAAGAAGGAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp CCGAACTTTTCACGCGACACCAGCCGCTCGATCTTCTaGCGCTGGCTTACGAACAGGTGCTTGCCCACCGAG +
Preference number: 6 (lower is better)
Translates to: PNFSRDTSRSIF*RWLTNRCLPTE
Trigger: CTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAAGTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 72 bp CCCCCTATTCTCCCATCTGGGCAGATGGAGGAACCCTaGCCTCCTGCTGCCCGCCAAGTCCTCCATTTAAGG +
Preference number: 6 (lower is better)
Translates to: PPILPSGQMEEP*PPAARQVLHLR
Trigger: CCTTAAATGGAGGACTTGGCGGGCAGCAGGAGGCAAGGGTTCCTCCATCTGCCCAGATGGGAGAATAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS GCA 72 bp CGAACTTTTCACGCGACACCAGCCGCTCGATCTTCTTaGGCTGGCTTACGAACAGGTGCTTGCCCACCGAGT +
Preference number: 6 (lower is better)
Translates to: RTFHATPAARSS*AGLRTGACPPS
Trigger: ACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAAGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CCA 72 bp TTTTCACGCGACACCAGCCGCTCGATCTTCTTGCGCTaGCTTACGAACAGGTGCTTGCCCACCGAGTACACG +
Preference number: 6 (lower is better)
Translates to: FSRDTSRSIFLR*LTNRCLPTEYT
Trigger: CGTGTACTCGGTGGGCAAGCACCTGTTCGTAAGCCAGCGCAAGAAGATCGAGCGGCTGGTGTCGCGTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317951.6
ENST00000589776.1
CDS CAA 90 bp TGGAGGGGGAATTGTGAGGGAGCAATGAAATCGCGGTGGTCCAATTaGGGGAGAGGCTCAGCAAACTCGGGCAAGATGGGTGTACCGCGT +
Preference number: 6 (lower is better)
Translates to: WRGNCEGAMKSRWSN*GRGSANSGKMGVPR
Trigger: ACGCGGTACACCCATCTTGCCCGAGTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCGATTTCATTGCTCCCTCACAATTCCCCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp TGGAGGGGGAATTGTGAGGGAGCAATGAAATCGCGGTaGTCCAATTTGGGGAGAGGCTCAGCAAACTCGGGC +
Preference number: 6 (lower is better)
Translates to: WRGNCEGAMKSR*SNLGRGSANSG
Trigger: GCCCGAGTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCGATTTCATTGCTCCCTCACAATTCCCCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp CCCAGAAGTAGTGCCCGTTGGGGCTCTGGGCATCCTTaGCGAAGTGGACTTTGTAATGTTTGTGCATGGCAG +
Preference number: 6 (lower is better)
Translates to: PRSSARWGSGHP*RSGLCNVCAWQ
Trigger: CTGCCATGCACAAACATTACAAAGTCCACTTCGCCAAGGATGCCCAGAGCCCCAACGGGCACTACTTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CCA 72 bp CCAATTTGGGGAGAGGCTCAGCAAACTCGGGCAAGATaGGTGTACCGCGTTTCCAATGTGAAGAGCCGAAAG +
Preference number: 6 (lower is better)
Translates to: PIWGEAQQTRAR*VYRVSNVKSRK
Trigger: CTTTCGGCTCTTCACATTGGAAACGCGGTACACCCATCTTGCCCGAGTTTGCTGAGCCTCTCCCCAAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS TCA 72 bp CTGTGGGCATTGAATGATACGGTGGAGGGGGAATTGTaGGGGAGCAATGAAATCGCGGTGGTCCAATTTGGG +
Preference number: 6 (lower is better)
Translates to: LWALNDTVEGEL*GSNEIAVVQFG
Trigger: CCCAAATTGGACCACCGCGATTTCATTGCTCCCTCACAATTCCCCCTCCACCGTATCATTCAATGCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317951.6
CDS CAA 72 bp AATTGTGAGGGAGCAATGAAATCGCGGTGGTCCAATTaGGGGAGAGGCTCAGCAAACTCGGGCAAGATGGGT +
Preference number: 6 (lower is better)
Translates to: NCEGAMKSRWSN*GRGSANSGKMG
Trigger: ACCCATCTTGCCCGAGTTTGCTGAGCCTCTCCCCAAATTGGACCACCGCGATTTCATTGCTCCCTCACAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317951.6