RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKIRAS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197885

Ensembl transcript IDs: ENST00000388759.7, ENST00000412028.5, ENST00000415901.6, ENST00000416026.2, ENST00000421515.6, ENST00000425478.7, ENST00000437230.5, ENST00000443659.6, ENST00000614374.4

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAAAAATATCCAGCATGGTGGAGTGGTGTTTCGAAGATGGGTTTaGTCACACATACTTTGTCGTACGTATCTACCCAAGCTGTCACTA +
Preference number: 1 (lower is better)
Translates to: WKNIQHGGVVFRRWV*SHILCRTYLPKLSL
Trigger: TAGTGACAGCTTGGGTAGATACGTACGACAAAGTATGTGTGATCAAACCCATCTTCGAAACACCACTCCACCATGCTGGATATTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 90 bp CTGTTAACTAACTGTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTaGTTCTATGTTGTGGACTACTTAAGTCTGCATTTGTTACTGTGC +
Preference number: 1 (lower is better)
Translates to: LLTNCKAWNRSCSVD*FYVVDYLSLHLLLC
Trigger: GCACAGTAACAAATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACAGTTAGTTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 90 bp AAACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTaGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTAC +
Preference number: 1 (lower is better)
Translates to: KPVVKYLKLLTNCKA*NRSCSVDWFYVVDY
Trigger: GTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 90 bp AGATTCAGAGAAATACTATACTTAATTGGAGGTCCAGGTTTTGCCTaGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCA +
Preference number: 1 (lower is better)
Translates to: RFREILYLIGGPGFA*QPGSLTSVKVNSVA
Trigger: TGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCAGGCAAAACCTGGACCTCCAATTAAGTATAGTATTTCTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR GCA 90 bp AAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAGTTaGTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCAT +
Preference number: 1 (lower is better)
Translates to: KYLKLLTNCKAWNRS*SVDWFYVVDYLSLH
Trigger: ATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 90 bp ATGTTACACAGAATGATTATGATATCTTCCGAAACAGCTTGGGGTTaGGGGGAAGTTACACATAGGTGCATTTGCATAACTATCCAAACT +
Preference number: 1 (lower is better)
Translates to: MLHRMIMISSETAWG*GEVTHRCICITIQT
Trigger: AGTTTGGATAGTTATGCAAATGCACCTATGTGTAACTTCCCCCCAACCCCAAGCTGTTTCGGAAGATATCATAATCATTCTGTGTAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTTTCCAGCCGACCCCTTaGTGGGAAGTATTGCCACTC +
Preference number: 2 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTFQPTP*WEVLPL
Trigger: GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAA...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCTCCAGCATGGTGGAGTaGTGTTTCGAAGATGGGTTT +
Preference number: 2 (lower is better)
Translates to: GCSLQSEALTVPVSTELSSSMVE*CFEDGF
Trigger: AAACCCATCTTCGAAACACCACTCCACCATGCTGGA...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CCA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTTTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTLPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CAA 90 bp AAGGGTCACATGAACACAGCTGGATGTTCATTGCAGTCTGAAGCCTaGACCGTTCCAGTCTCTACTGAACTCAGCCTAACACATAAGAGT +
Preference number: 2 (lower is better)
Translates to: KGHMNTAGCSLQSEA*TVPVSTELSLTHKS
Trigger: ACTCTTATGTGTTAGGCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTTCATGTGACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR TCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGGAGCTAAGGGTCACATaGACACAGCTGGATGTTCAT +
Preference number: 2 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQELRVT*TQLDVH
Trigger: ATGAACATCCAGCTGTGTTCATGTGACCCTTAGCTC...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp GTAATCTACATTCTTTTCTTCCAGCCGACCCCTTGGTGGGAAGTATTGCCACTCTCCATCTATGTAACATaGATGGGTGGGAAGCTAGAT +
Preference number: 2 (lower is better)
Translates to: VIYILFFQPTPWWEVLPLSIYVT*MGGKLD
Trigger: ATCTAGCTTCCCACCCATGCATGTTACATAGATGGA...GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAGAAAAGAATGTAGATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR TCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGGTCAGCCACATTGCTTaGGTCTTGCCAAAATCTTTA +
Preference number: 2 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQVSHIA*VLPKSL
Trigger: TAAAGATTTTGGCAAGACTCAAGCAATGTGGCTGAC...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CAA 90 bp ATGGAAAAATATCCAGCATGGTGGAGTGGTGTTTCGAAGATGGGTTaGATCACACATACTTTGTCGTACGTATCTACCCAAGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: MEKYPAWWSGVSKMG*ITHTLSYVSTQAVT
Trigger: AGTGACAGCTTGGGTAGATACGTACGACAAAGTATGTGTGATCAAACCCATCTTCGAAACACCACTCCACCATGCTGGATATTTTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR TCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 2 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR TCA 90 bp GTAATCTACATTCTTTTCTTCCAGCCGACCCCTTGGTGGGAAGTATTGCCACTCAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 2 (lower is better)
Translates to: VIYILFFQPTPWWEVLPLKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAGAAAAGAATGTAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTTCTGACTTGCAGATaGTGTAGTAGCAAGTACATG +
Preference number: 2 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQFLTCR*CSSKYM
Trigger: CATGTACTTGCTACTACAGCATCTGCAAGTCAGAAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR TCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 2 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR TCA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATTGGCAGTACATGTCCTaGCCCAGCAGTTCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYWQYMS*PSSSVS
Trigger: AGAAACAGAACTGCTGGGTCAGGACATGTACTGCCA...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 2 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 2 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSLGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGSKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLILPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGCAAGTACATGAGAAATaGGTTCCGTCATGGATAAAT +
Preference number: 2 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQQVHEK*VPSWIN
Trigger: ATTTATCCATGACGGAACCCATTTCTCATGTACTTG...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 2 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 2 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQLGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 2 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGLGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIILPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATGCGTGGAATAGGAGTTaGTCAGTGGATTGGTTCTAT +
Preference number: 2 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYAWNRS*SVDWFY
Trigger: ATAGAACCAATCCACTGAGCAACTCCTATTCCACGC...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR GCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTTACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 2 (lower is better)
Translates to: NWGFTILTLFVCHRRELLYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CCA 90 bp ACATGTCCTGACCCAGCAGTTCTGTTTCTGTATGTCTCTTTCAGAGAAACTTATAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: TCPDPAVLFLYVSFRETYSKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...ATAAGTTTCTCTGAAAGAGACATACAGAAACAGAACTGCTGGGTCAGGACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTAGTTGCTCAGTGGATTaGTTCTATGTTGTGGACTAC +
Preference number: 2 (lower is better)
Translates to: NWGFTILTLFVCHRRELLSCSVD*FYVVDY
Trigger: GTAGTCCACAACATAGAACCAATCCACTGAGCAACT...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR TCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 2 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR TCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTCTGAATCAGGACTTGTaGAAACCTGTAGTGAAATAC +
Preference number: 2 (lower is better)
Translates to: NWGFTILTLFVCHRRELLLNQDL*KPVVKY
Trigger: GTATTTCACTACAGGTTTTCACAAGTCCTGATTCAG...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLISKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR TCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 2 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 2 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCTTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 2 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSLGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKSKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR CAA 90 bp TACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTaGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCT +
Preference number: 2 (lower is better)
Translates to: YLTLPGTSTHAKHSN*SKAKSWVLVCLAKS
Trigger: AGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 2 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 2 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 2 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 2 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKLGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 2 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNISKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CAA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTCTTCCAGCCGACCCCTaGGTGGGAAGTATTGCCACT +
Preference number: 3 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTLPADP*VGSIAT
Trigger: AGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAG...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CAA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTTCCGTCATGGATAAATaGGTACCCTGCCTTAGGGGG +
Preference number: 3 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTSVMDK*VPCLRG
Trigger: CCCCCTAAGGCAGGGTACCAATTTATCCATGACGGA...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CAA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 3 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CAA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCGTTTCGAAGATGGGTTaGATCACACATACTTTGTCG +
Preference number: 3 (lower is better)
Translates to: GCSLQSEALTVPVSTELSVSKMG*ITHTLS
Trigger: CGACAAAGTATGTGTGATCAAACCCATCTTCGAAAC...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR TCA 72 bp ATGCCGTTAACTGGTGACATTGAGCTAAGGGTCACATaGACACAGCTGGATGTTCATTGCAGTCTGAAGCCT +
Preference number: 3 (lower is better)
Translates to: MPLTGDIELRVT*TQLDVHCSLKP
Trigger: AGGCTTCAGACTGCAATGAACATCCAGCTGTGTTCATGTGACCCTTAGCTCAATGTCACCAGTTAACGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR TCA 72 bp ATCCAGCATGGTGGAGTGGTGTTTCGAAGATGGGTTTaGTCACACATACTTTGTCGTACGTATCTACCCAAG +
Preference number: 3 (lower is better)
Translates to: IQHGGVVFRRWV*SHILCRTYLPK
Trigger: CTTGGGTAGATACGTACGACAAAGTATGTGTGATCAAACCCATCTTCGAAACACCACTCCACCATGCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 72 bp CAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTaGTACCCTGCCTTAGGGGGCATTTTGGCAGTACAT +
Preference number: 3 (lower is better)
Translates to: QVHEKWVPSWIN*YPALGGILAVH
Trigger: ATGTACTGCCAAAATGCCCCCTAAGGCAGGGTACCAATTTATCCATGACGGAACCCATTTCTCATGTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR GCA 72 bp CAGAGAAATACTATACTTAATTGGAGGTCCAGGTTTTaGCTGGCAACCTGGCTCTTTAACCAGCGTAAAGGT +
Preference number: 3 (lower is better)
Translates to: QRNTILNWRSRF*LATWLFNQRKG
Trigger: ACCTTTACGCTGGTTAAAGAGCCAGGTTGCCAGGCAAAACCTGGACCTCCAATTAAGTATAGTATTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 72 bp AACTGTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTaGTTCTATGTTGTGGACTACTTAAGTCTGCATTTG +
Preference number: 3 (lower is better)
Translates to: NCKAWNRSCSVD*FYVVDYLSLHL
Trigger: CAAATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 3 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR-3UTR CAA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGGACATTTGGGTTCAGTaGCTTGTAGTCTGTAAATTT +
Preference number: 3 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQDIWVQ*LVVCKF
Trigger: AAATTTACAGACTACAAGCAACTGAACCCAAATGTC...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR GCA 72 bp AAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAGTTaGTCAGTGGATTGGTTCTATGTTGTGGACTACTTA +
Preference number: 3 (lower is better)
Translates to: KLLTNCKAWNRS*SVDWFYVVDYL
Trigger: TAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACAGTTAGTTAACAGCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CCA 72 bp AGAATGATTATGATATCTTCCGAAACAGCTTGGGGTTaGGGGGAAGTTACACATAGGTGCATTTGCATAACT +
Preference number: 3 (lower is better)
Translates to: RMIMISSETAWG*GEVTHRCICIT
Trigger: AGTTATGCAAATGCACCTATGTGTAACTTCCCCCCAACCCCAAGCTGTTTCGGAAGATATCATAATCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR CCA 72 bp GAAATACTATACTTAATTGGAGGTCCAGGTTTTGCCTaGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAAT +
Preference number: 3 (lower is better)
Translates to: EILYLIGGPGFA*QPGSLTSVKVN
Trigger: ATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCAGGCAAAACCTGGACCTCCAATTAAGTATAGTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 3 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
3UTR CCA 72 bp GTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTaGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTT +
Preference number: 3 (lower is better)
Translates to: VKYLKLLTNCKA*NRSCSVDWFYV
Trigger: AACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR-3UTR CAA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATTGTACATTTAGACATTaGGGTTCAGTTGCTTGTAGT +
Preference number: 3 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYCTFRH*GSVACS
Trigger: ACTACAAGCAACTGAACCCAAATGTCTAAATGTACA...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR TCA 72 bp ATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATaGAATTTAGCTTACTACCCCAAACTGTTCAATGTT +
Preference number: 3 (lower is better)
Translates to: MGLSLFSKISTR*NLAYYPKLFNV
Trigger: AACATTGAACAGTTTGGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTCCGCGAAGGCCTCCCTaGGAGGCTGGGGAAGCGTCG +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSPRRPP*EAGEAS
Trigger: CGACGCTTCCCCAGCCTCCCAGGGAGGCCTTCGCGG...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTCGCGGCCACCGGCTTTaGAGCCTGGACCCCAACTTG +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSRGHRL*SLDPNL
Trigger: CAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCG...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR TCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTGGCAGGAGAATCACTTaGACCCAGGGGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSGRRIT*TQGAEV
Trigger: AACCTCCGCCCCCTGGGTTCAAGTGATTCTCCTGCC...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR TCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGGCAGGAGAATCACTTaGACCCAGGGGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGGRRIT*TQGAEV
Trigger: AACCTCCGCCCCCTGGGTTCAAGTGATTCTCCTGCC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTGCAGGACGAGGGCGTaGTGCAGGCCGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLICRTRA*CRPEEA
Trigger: CGCCTCCTCCGGCCTGCAGCACGCCCTCGTCCTGCA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR CCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCAGGGGTCAGGGAGGGTaGGAGTTGGTAAAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GCSLQSEALTVPVSTELSRGQGG*ELVKSR
Trigger: CCTACTCTTTACCAACTCCCACCCTCCCTGACCCCT...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAAGGACGAGGGCGTGCTaGAGGCCGGAGGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKRTRAC*RPEEAP
Trigger: AGGCGCCTCCTCCGGCCTGCAGCACGCCCTCGTCCT...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR GCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCCTGGGCGCTGGGGCCTaGTGGAGGAGCTTCACGCAG +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSLGAGA*WRSFTQ
Trigger: CTGCGTGAAGCTCCTCCAGCAGGCCCCAGCGCCCAG...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATGGGGCCCAGATTTCTaGGCCCGTCGTGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKWGPDF*ARRAVA
Trigger: GGCCACCGCACGACGGGCGCAGAAATCTGGGCCCCA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTTCCAGCCGACCCCTTaGTGGGAAGTATTGCCACTC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGFQPTP*WEVLPL
Trigger: GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp GTAATCTACATTCTTTTCTTCCAGCCGACCCCTTGGTGGGAAGTATTGCCACTCGGTCCAGGTTTTGCCTaGCAACCTGGCTCTTTAACC +
Preference number: 4 (lower is better)
Translates to: VIYILFFQPTPWWEVLPLGPGFA*QPGSLT
Trigger: GGTTAAAGAGCCAGGTTGCCAGGCAAAACCTGGACC...GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAGAAAAGAATGTAGATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGGCGCTGGGGCCTGCTaGAGGAGCTTCACGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIGAGAC*RSFTQS
Trigger: AGACTGCGTGAAGCTCCTCCAGCAGGCCCCAGCGCC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR TCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTCACGCAGTCTGGAGCTaGAGGGACACAGCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIHAVWS*RDTASA
Trigger: GGCGCTCGCTGTGTCCCTTCAGCTCCAGACTGCGTG...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGCCTGGACCCCAACTTaGCTCCTCTCGCGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIAWTPT*LLSRRD
Trigger: GTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR GCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGSLFAH*CATSAS
Trigger: GGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGAAAGAGCTAGACTTTaGCTCCTCTCGCGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGERARL*LLSRRD
Trigger: GTCTCTCCGCGAGAGGAGGCAAAGTCTAGCTCTTTC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412028.5
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAACGCGGCCACCGGCTTTaGAGCCTGGACCCCAACTTG +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDERGHRL*SLDPNL
Trigger: CAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCG...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCCGACTCCCCGCAGACTaGGTAGCACCGCCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIRLPAD*VAPPLL
Trigger: TAACAGGGGCGGTGCTACCCAGTCTGCGGGGAGTCG...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR TCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCGGCAGGAGAATCACTTaGACCCAGGGGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSGRRIT*TQGAEV
Trigger: AACCTCCGCCCCCTGGGTTCAAGTGATTCTCCTGCC...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR TCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGGCAGGAGAATCACTTaGACCCAGGGGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIGRRIT*TQGAEV
Trigger: AACCTCCGCCCCCTGGGTTCAAGTGATTCTCCTGCC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR TCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTAGGCAAAGGAAAGCTTaGTTTGCTCTGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSRQRKA*FALGLR
Trigger: TCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTGGCAGTACATGTCCTaGCCCAGCAGTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQWQYMS*PSSSVS
Trigger: AGAAACAGAACTGCTGGGTCAGGACATGTACTGCCA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCGTAGTAGCAAGTACATaGGAAATGGGTTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: GCSLQSEALTVPVSTELSVVAST*EMGSVM
Trigger: CATGACGGAACCCATTTCTCATGTACTTGCTACTAC...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp GTAATCTACATTCTTTTCTTCCAGCCGACCCCTTGGTGGGAAGTATTGCCACTCATGTTCATTGCAGTCTaGAGCCTTGACCGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VIYILFFQPTPWWEVLPLMFIAV*SLDRSS
Trigger: ACTGGAACGGTCAAGGCTTCAGACTGCAATGAACAT...GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAGAAAAGAATGTAGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGCCTGGACCCCAACTTaGCTCCTCTCGCGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKAWTPT*LLSRRD
Trigger: GTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTGCCTGGACCCCAACTTaGCTCCTCTCGCGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIAWTPT*LLSRRD
Trigger: GTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGC...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR GCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTCACAAACCACAACCTTaGAGCCCTTTCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSHKPQP*SPFPSS
Trigger: AGAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTG...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTACCCGCAACGCAAAATaGCAGCATTTTCTCGGCATT +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSTRNAK*QHFLGI
Trigger: AATGCCGAGAAAATGCTGGCATTTTGCGTTGCGGGT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCACCGGCTTTGGAGCCTaGACCCCAACTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSTGFGA*TPTCLL
Trigger: GAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGT...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSLPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTCCAGCATGGTGGAGTaGTGTTTCGAAGATGGGTTT +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSSSMVE*CFEDGF
Trigger: AAACCCATCTTCGAAACACCACTCCACCATGCTGGA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGCCTCGGGGAAGGCGTaGGGCTTTCCCGAAGGGATA +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKASGKA*GFPEGI
Trigger: TATCCCTTCGGGAAAGCCCCACGCCTTCCCCGAGGC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR TCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTCGCTCGAAGGAGCTCTaGGGTGCTTCGATCCCGAGC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIRSKEL*GASIPS
Trigger: GCTCGGGATCGAAGCACCTCAGAGCTCCTTCGAGCG...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGCCTGGACCCCAACTTaGCTCCTCTCGCGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIAWTPT*LLSRRD
Trigger: GTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388759.7
ENST00000425478.7
ENST00000437230.5
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAACCAGGGGGCGGAGGTTaGACTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEPGGGG*TELRLH
Trigger: GTGCAATCTCAGCTCAGTGCAACCTCCGCCCCCTGG...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTG +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGASTCL*SERSIL
Trigger: CAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCTCCATCTATGTAACATaGATGGGTGGGAAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: GCSLQSEALTVPVSTELSSIYVT*MGGKLD
Trigger: ATCTAGCTTCCCACCCATGCATGTTACATAGATGGA...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAACTCAGGCTCGAATCTTaGGGAGCAGGGGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQLRLES*GAGGGT
Trigger: TGTCCCGCCCCCTGCTCCGCAAGATTCGAGCCTGAG...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGCACAGTCTTAAAAACTaGTTCCAGATCCCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGHSLKN*FQIPSG
Trigger: GCCCGAAGGGATCTGGAAGCAGTTTTTAAGACTGTG...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR CCA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATACCGGCTTTGGAGCCTaGACCCCAACTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYTGFGA*TPTCLL
Trigger: GAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGT...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGLPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTCTCTCAGCGCAGCTCTaGGGCCCAGATTTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNILSAQL*GPDFCA
Trigger: GGCGCAGAAATCTGGGCCCCAGAGCTGCGCTGAGAG...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAAAATCCCTGGGCGCTaGGGCCTGCTGGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEKIPGR*GLLEEL
Trigger: AAGCTCCTCCAGCAGGCCCCAGCGCCCAGGGATTTT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443659.6
3UTR CAA 72 bp ATGAACACAGCTGGATGTTCATTGCAGTCTGAAGCCTaGACCGTTCCAGTCTCTACTGAACTCAGCCTAACA +
Preference number: 4 (lower is better)
Translates to: MNTAGCSLQSEA*TVPVSTELSLT
Trigger: TGTTAGGCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGTCAGCCACATTGCTTaGGTCTTGCCAAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTVSHIA*VLPKSL
Trigger: TAAAGATTTTGGCAAGACTCAAGCAATGTGGCTGAC...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGYFLTF*PLLCHF
Trigger: GAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCAAGCATTTTCTGACTTaGAGATGCTGTAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: GCSLQSEALTVPVSTELSKHFLT*RCCSSK
Trigger: CTTGCTACTACAGCATCTGCAAGTCAGAAAATGCTT...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGGCGTGGAATAGGAGTTaGTCAGTGGATTGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQAWNRS*SVDWFY
Trigger: ATAGAACCAATCCACTGAGCAACTCCTATTCCACGC...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp ACATGTCCTGACCCAGCAGTTCTGTTTCTGTATGTCTCTTTCAGAGAAACTTATTGGAGGTCCAGGTTTTaGCTGGCAACCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TCPDPAVLFLYVSFRETYWRSRF*LATWLF
Trigger: AAAGAGCCAGGTTGCCAGGCAAAACCTGGACCTCCA...ATAAGTTTCTCTGAAAGAGACATACAGAAACAGAACTGCTGGGTCAGGACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTGAAGGAGCTCTGAGGTaGTTCGATCCCGAGCGACTC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIEGALR*FDPERL
Trigger: GAGTCGCTCGGGATCGAAGCACCTCAGAGCTCCTTC...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTATTCCGAGGAGGAAGTaGAGGACGAGGGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIIPRRK*RTRACC
Trigger: GCAGCACGCCCTCGTCCTGCACTTCCTCCTCGGAAT...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGGGACGAAATCCGTATaGAGAAAAAGCGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKGTKSV*RKSAGP
Trigger: CGGCCCGGCGCTTTTTCTGCATACGGATTTCGTCCC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAACCGGCTTTGGAGCCTaGACCCCAACTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQTGFGA*TPTCLL
Trigger: GAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGT...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTAAATATCCAGCATGGTaGAGTGGTGTTTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSKYPAW*SGVSKM
Trigger: CATCTTCGAAACACCACTCCACCATGCTGGATATTT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTTTGCCTGGCAACCTaGCTCTTTAACCAGCGTAAA +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQFCLAT*LFNQRK
Trigger: TTTACGCTGGTTAAAGAGCCAGGTTGCCAGGCAAAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTAGGACAAAATCCCTaGGCGCTGGGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELGQNP*ALGPAG
Trigger: TCCAGCAGGCCCCAGCGCCCAGGGATTTTGTCCTAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR TCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTCGGTCTGTTTCTACTaGAGCCATGTATACATCTTC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGSVCFY*SHVYIF
Trigger: GAAGATGTATACATGGCTTCAGTAGAAACAGACCGA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 4 (lower is better)
Translates to: GCSLQSEALTVPVSTELSKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTTACACAGCTGTAGATaGGGTATCCTAGAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSLHSCR*GILEKV
Trigger: AACCTTTTCTAGGATACCTCATCTACAGCTGTGTAA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTGCAGTCTGAAGCCTTaGCCGTTCCAGTCTCTACTG +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLICSLKP*PFQSLL
Trigger: CAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLISLFAH*CATSAS
Trigger: GGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTAAGGAAAGCTTGATTTaGTCTGGGGTTGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSKESLI*SGVEKV
Trigger: AACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATCAGCCGACCCCTTGGTaGGAAGTATTGCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYQPTPW*EVLPLS
Trigger: ACTGAGTGGCAATACTTCCCACCAAGGGGTCGGCTG...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CAA 72 bp AGTGGTGTTTCGAAGATGGGTTTGATCACACATACTTaGTCGTACGTATCTACCCAAGCTGTCACTATTCGC +
Preference number: 4 (lower is better)
Translates to: SGVSKMGLITHT*SYVSTQAVTIR
Trigger: GCGAATAGTGACAGCTTGGGTAGATACGTACGACAAAGTATGTGTGATCAAACCCATCTTCGAAACACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
3UTR CAA 72 bp TATCCAGCATGGTGGAGTGGTGTTTCGAAGATGGGTTaGATCACACATACTTTGTCGTACGTATCTACCCAA +
Preference number: 4 (lower is better)
Translates to: YPAWWSGVSKMG*ITHTLSYVSTQ
Trigger: TTGGGTAGATACGTACGACAAAGTATGTGTGATCAAACCCATCTTCGAAACACCACTCCACCATGCTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTTCGAAGATGGGTTTaGTCACACATACTTTGTCGT +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQFRRWV*SHILCR
Trigger: ACGACAAAGTATGTGTGATCAAACCCATCTTCGAAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGGGAGAAAAATGGAATaGACTAAGATAAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTGRKME*TKIKTD
Trigger: GTCTGTCTTTATCTTAGTTCATTCCATTTTTCTCCC...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIISLFAH*CATSAS
Trigger: GGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: NWGFTILTLFVCHRRELLSLFAH*CATSAS
Trigger: GGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGAAGGAAAGCTTGATTTaGTCTGGGGTTGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGKESLI*SGVEKV
Trigger: AACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTT...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 4 (lower is better)
Translates to: GCSLQSEALTVPVSTELSEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGCTTCCTGTAGACCTCTaGTGTCATAAAGATGTAACT +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGLPVDL*CHKDVT
Trigger: AGTTACATCTTTATGACACCAGAGGTCTACAGGAAG...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSSKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTCCGTCATGGATAAATTaGTACCCTGCCTTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NWGFTILTLFVCHRRELLPSWIN*YPALGG
Trigger: GCCCCCTAAGGCAGGGTACCAATTTATCCATGACGG...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp AACACAGCTGGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTCAAGTACATGAGAAATaGGTTCCGTCATGGATAAAT +
Preference number: 4 (lower is better)
Translates to: NTAGCSLQSEALTVPVSTQVHEK*VPSWIN
Trigger: ATTTATCCATGACGGAACCCATTTCTCATGTACTTG...AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCAGCCTTTGCCACATCTaGACGCATAATCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLISLCHI*THNLEG
Trigger: TCCTTCCAGATTATGCGTTCAGATGTGGCAAAGGCT...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTG +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIASTCL*SERSIL
Trigger: CAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTG +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIFCPLL*HFSVHL
Trigger: CAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAATCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQSLFAH*CATSAS
Trigger: GGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNISLFAH*CATSAS
Trigger: GGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCCATCCCCAGCAACTATaGCTGGCACATATTAGACAC +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIHPQQL*LAHIRH
Trigger: GTGTCTAATATGTGCCAGGCATAGTTGCTGGGGATG...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCTTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSLPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAAGGCAAAGGAAAGCTTaGTTTGCTCTGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKRQRKA*FALGLR
Trigger: TCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCT...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAGGCAAAGGAAAGCTTaGTTTGCTCTGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDERQRKA*FALGLR
Trigger: TCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTAGGCAAAGGAAAGCTTaGTTTGCTCTGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIRQRKA*FALGLR
Trigger: TCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCT...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAACACAAACCACAACCTTaGAGCCCTTTCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEHKPQP*SPFPSS
Trigger: AGAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTG...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTCACAAACCACAACCTTaGAGCCCTTTCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIHKPQP*SPFPSS
Trigger: AGAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTG...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTCACAAACCACAACCTTaGAGCCCTTTCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: NWGFTILTLFVCHRRELLHKPQP*SPFPSS
Trigger: AGAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTG...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTG +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEASTCL*SERSIL
Trigger: CAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGC...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTG +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKASTCL*SERSIL
Trigger: CAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCTACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSYFLTF*PLLCHF
Trigger: GAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTA...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTTTACTGTCCTTAAGTaGCTAATCATTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGFTVLK*LIIFKR
Trigger: CCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTTACTGTCCTTAAGTaGCTAATCATTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQFTVLK*LIIFKR
Trigger: CCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTGCCCTCAAGTATCTaGTCTATCAACAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELPSSI*SINRGL
Trigger: CAGACCCCTGTTGATAGACCAGATACTTGAGGGCAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp TGGCAACCTGGCTCTTTAACCAGCGTAAAGGTTAATAGTGTTGCACTGCAACAGTTGAGTGTTGTTTGTTaGGAGAAAAATGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: WQPGSLTSVKVNSVALQQLSVVC*EKNGMN
Trigger: GTTCATTCCATTTTTCTCCCAACAAACAACACTCAA...CTGTTGCAGTGCAACACTATTAACCTTTACGCTGGTTAAAGAGCCAGGTTGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAAGGCAAAGGAAAGCTTaGTTTGCTCTGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQRQRKA*FALGLR
Trigger: TCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCT...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGTCAGCCACATTGCTTaGGTCTTGCCAAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIVSHIA*VLPKSL
Trigger: TAAAGATTTTGGCAAGACTCAAGCAATGTGGCTGAC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTG +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQASTCL*SERSIL
Trigger: CAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGC...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIYFLTF*PLLCHF
Trigger: GAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKYFLTF*PLLCHF
Trigger: GAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATTTAATAGTGTTGCACTaGAACAGCCCCGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYLIVLH*NSPEDF
Trigger: GAAGTCTTCGGGGCTGTTGCAGTGCAACACTATTAA...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGAAGGCCAAAAATTCTaGGTTGTTTCCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKEGQKF*VVSCCI
Trigger: GATGCAGCAGGAAACAACGCAGAATTTTTGGCCTTC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAACTAACTGTAAGGCGTaGAATAGGAGTTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKTNCKA*NRSCSV
Trigger: CACTGAGCAACTCCTATTCCACGCCTTACAGTTAGT...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCGAAAAATATCCAGCATaGTGGAGTGGTGTTTCGAAG +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSEKYPA*WSGVSK
Trigger: CTTCGAAACACCACTCCACCATGCTGGATATTTTTC...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCCTGCCAAACAGGTCTTaGCAAATAAACATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSLPNRS*QINILL
Trigger: GAGCAGAATGTTTATTTGCCAAGACCTGTTTGGCAG...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR TCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCAGAAGCTCCACTCTTTaGAAGGATTCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSRSSTL*KDSRLF
Trigger: GAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCT...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: NWGFTILTLFVCHRRELLDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR TCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGTCAGCCACATTGCTTaGGTCTTGCCAAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKVSHIA*VLPKSL
Trigger: TAAAGATTTTGGCAAGACTCAAGCAATGTGGCTGAC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp ACATGTCCTGACCCAGCAGTTCTGTTTCTGTATGTCTCTTTCAGAGAAACTTATTGTAGCAGCAATAGCTaGTTTGTAAGTATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: TCPDPAVLFLYVSFRETYCSSNS*FVSIVF
Trigger: AAAGACGATACTTACAAATCAGCTATTGCTGCTACA...ATAAGTTTCTCTGAAAGAGACATACAGAAACAGAACTGCTGGGTCAGGACATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAATACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQYFLTF*PLLCHF
Trigger: GAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTA...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIYFLTF*PLLCHF
Trigger: GAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCAAGGAAAGCTTGATTTaGTCTGGGGTTGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSKESLI*SGVEKV
Trigger: AACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTT...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTACAGTCAGCCACATTaGTTGAGTCTTGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIYSQPH*LSLAKI
Trigger: GATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATCCATCTATGTAACATaGATGGGTGGGAAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKSIYVT*MGGKLD
Trigger: ATCTAGCTTCCCACCCATGCATGTTACATAGATGGA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388759.7
ENST00000425478.7
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAACTTGGTGGGAAGTATTaGCACTCAGTATATGACCAA +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELGGKY*HSVYDQ
Trigger: TTGGTCATATACTGAGTGGCAATACTTCCCACCAAG...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAACTCAGGATATCATTCTaGTTACTGCCCATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKLRISF*LLPISK
Trigger: CTTGGAAATGGGCAGTAAGCAGAATGATATCCTGAG...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCCTTCCTGTAGACCTCTaGTGTCATAAAGATGTAACT +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSLPVDL*CHKDVT
Trigger: AGTTACATCTTTATGACACCAGAGGTCTACAGGAAG...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAAGAAGCTCCACTCTTTaGAAGGATTCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKRSSTL*KDSRLF
Trigger: GAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCT...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTAGAAGCTCCACTCTTTaGAAGGATTCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIRSSTL*KDSRLF
Trigger: GAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCT...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAGAAGCTCCACTCTTTaGAAGGATTCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDERSSTL*KDSRLF
Trigger: GAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQDLLWG*ESLLAN
Trigger: ATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATC...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGTCAGCCACATTGCTTaGGTCTTGCCAAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQVSHIA*VLPKSL
Trigger: TAAAGATTTTGGCAAGACTCAAGCAATGTGGCTGAC...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGTCAGCCACATTGCTTaGGTCTTGCCAAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIVSHIA*VLPKSL
Trigger: TAAAGATTTTGGCAAGACTCAAGCAATGTGGCTGAC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAACTTCCTGTAGACCTCTaGTGTCATAAAGATGTAACT +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELPVDL*CHKDVT
Trigger: AGTTACATCTTTATGACACCAGAGGTCTACAGGAAG...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTAGAAGCTCCACTCTTTaGAAGGATTCAAGGTTATTC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIRSSTL*KDSRLF
Trigger: GAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCT...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAAAATCTCCACAAGATaGAATTTAGCTTACTACCCC +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEKISTR*NLAYYP
Trigger: GGGGTAGTAAGCTAAATTTCATCTTGTGGAGATTTT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR TCA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATGTAGCAGCAATAGCTaGTTTGTAAGTATCGTCTTT +
Preference number: 4 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKCSSNS*FVSIVF
Trigger: AAAGACGATACTTACAAATCAGCTATTGCTGCTACA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388759.7
ENST00000425478.7
CDS-3UTR TCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTCTGAATCAGGACTTGTaGAAACCTGTAGTGAAATAC +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNILNQDL*KPVVKY
Trigger: GTATTTCACTACAGGTTTTCACAAGTCCTGATTCAG...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAAAGGAAAGCTTGATTTaGTCTGGGGTTGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQKESLI*SGVEKV
Trigger: AACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTT...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTAAGGAAAGCTTGATTTaGTCTGGGGTTGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIKESLI*SGVEKV
Trigger: AACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTT...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 4 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLILGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCTTTACTGTCCTTAAGTaGCTAATCATTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSFTVLK*LIIFKR
Trigger: CCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAA...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTTTCTGACTTGCAGATaGTGTAGTAGCAAGTACATG +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIFLTCR*CSSKYM
Trigger: CATGTACTTGCTACTACAGCATCTGCAAGTCAGAAA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAACTTCCTGTAGACCTCTaGTGTCATAAAGATGTAACT +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQLPVDL*CHKDVT
Trigger: AGTTACATCTTTATGACACCAGAGGTCTACAGGAAG...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTCTTCCTGTAGACCTCTaGTGTCATAAAGATGTAACT +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNILPVDL*CHKDVT
Trigger: AGTTACATCTTTATGACACCAGAGGTCTACAGGAAG...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDESKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIISKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATGTAACATGCATGGGTaGGAAGCTAGATTAATATTC +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDECNMHG*EARLIF
Trigger: GAATATTAATCTAGCTTCCCACCCATGCATGTTACA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388759.7
ENST00000425478.7
CDS-3UTR CCA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTTGTAACATGCATGGGTaGGAAGCTAGATTAATATTC +
Preference number: 4 (lower is better)
Translates to: NWGFTILTLFVCHRRELLCNMHG*EARLIF
Trigger: GAATATTAATCTAGCTTCCCACCCATGCATGTTACA...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTTACTGTCCTTAAGTaGCTAATCATTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEFTVLK*LIIFKR
Trigger: CCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAAGCAAAGCTAAATCATaGGTCTTAGTCTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQSKAKS*VLVCLA
Trigger: TGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTAATACTATACTTAATTaGAGGTCCAGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNINTILN*RSRFCL
Trigger: CAGGCAAAACCTGGACCTCCAATTAAGTATAGTATT...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGAAGTTACACATAGGTaGATTTGCATAACTATCCAA +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIEVTHR*ICITIQ
Trigger: TTGGATAGTTATGCAAATGCACCTATGTGTAACTTC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 4 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNILGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAATTGGGCTTAGAAGTTTaGATAATGTTACACAGAATG +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQLGLEV*IMLHRM
Trigger: CATTCTGTGTAACATTATGCAAACTTCTAAGCCCAA...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR GCA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAATTTACTGTCCTTAAGTaGCTAATCATTTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQFTVLK*LIIFKR
Trigger: CCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAA...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS GCA 90 bp CCACCGCGGTACGCGGCCACCGGCTTTGGAGCCTGGACCCCAACTTaGCTCCTCTCGCGGAGAGACAGTCGCCGACGCTCGCTTAGCCGC +
Preference number: 5 (lower is better)
Translates to: PPRYAATGFGAWTPT*LLSRRDSRRRSLSR
Trigger: GCGGCTAAGCGAGCGTCGGCGACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTACCGCGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS CCA 90 bp AAGACAGCGGCTCCACCGCGGTACGCGGCCACCGGCTTTGGAGCCTaGACCCCAACTTGCCTCCTCTCGCGGAGAGACAGTCGCCGACGC +
Preference number: 5 (lower is better)
Translates to: KTAAPPRYAATGFGA*TPTCLLSRRDSRRR
Trigger: GCGTCGGCGACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTACCGCGGTGGAGCCGCTGTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS GCA 90 bp TCTGTCTTGCAGATTCCGAGGAGGAAGTGCAGGACGAGGGCGTGCTaGAGGCCGGAGGAGGCGCCTCGGGGAAGGCGTGGGGCTTTCCCG +
Preference number: 5 (lower is better)
Translates to: SVLQIPRRKCRTRAC*RPEEAPRGRRGAFP
Trigger: CGGGAAAGCCCCACGCCTTCCCCGAGGCGCCTCCTCCGGCCTGCAGCACGCCCTCGTCCTGCACTTCCTCCTCGGAATCTGCAAGACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS GCA 90 bp GGCGTGGGGCTTTCCCGAAGGGATACGCTCGAAGGAGCTCTGAGGTaGTTCGATCCCGAGCGACTCCCCGCAGACTGGGTAGCACCGCCC +
Preference number: 5 (lower is better)
Translates to: GVGLSRRDTLEGALR*FDPERLPADWVAPP
Trigger: GGGCGGTGCTACCCAGTCTGCGGGGAGTCGCTCGGGATCGAAGCACCTCAGAGCTCCTTCGAGCGTATCCCTTCGGGAAAGCCCCACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS CCA 90 bp GACCTCAAAGACAGCGGCTCCACCGCGGTACGCGGCCACCGGCTTTaGAGCCTGGACCCCAACTTGCCTCCTCTCGCGGAGAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: DLKDSGSTAVRGHRL*SLDPNLPPLAERQS
Trigger: CGACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTACCGCGGTGGAGCCGCTGTCTTTGAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGAGCCTGGACCCCAACTaGCCTCCTCTCGCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGSLDPN*PPLAER
Trigger: TCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCT...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS GCA 90 bp GTAACAGTCACCTCCCACAGTCTTACTTTCTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCCACTTGTCTCTGCTCAGAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: VTVTSHSLTFSLFAH*CATSASTCLCSERS
Trigger: CGACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAAGACTGTGGGAGGTGACTGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS GCA 90 bp CCGATCTGTAACAGTCACCTCCCACAGTCTTACTTTCTCACTTTTTaGCCACTGCTGTGCCACTTCAGCGTCCACTTGTCTCTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: PICNSHLPQSYFLTF*PLLCHFSVHLSLLR
Trigger: TCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAAGACTGTGGGAGGTGACTGTTACAGATCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTGCCTTAGGGGGCATTTaGGCAGTACATGTCCTGACC +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSALGGI*AVHVLT
Trigger: GGTCAGGACATGTACTGCCAAAATGCCCCCTAAGGC...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGCTTCCAGCCGACCCCTaGGTGGGAAGTATTGCCACT +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGLPADP*VGSIAT
Trigger: AGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAG...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTCCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTCACTTCAGCGTCCACTaGTCTCTGCTCAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSHFSVH*SLLRKV
Trigger: GACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTG...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAGCTCAGGCTCGAATCTaGCGGAGCAGGGGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEAQARI*RSRGRD
Trigger: GTCCCGCCCCCTGCTCCGCAAGATTCGAGCCTGAGC...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS GCA 90 bp AGTCACCTCCCACAGTCTTACTTTCTCACTTTTTGCCCACTGCTGTaGCACTTCAGCGTCCACTTGTCTCTGCTCAGAAAGGTCGATTTT +
Preference number: 5 (lower is better)
Translates to: SHLPQSYFLTFCPLL*HFSVHLSLLRKVDF
Trigger: AAAATCGACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAAGACTGTGGGAGGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCAGCCTGGACCCCAACTaGCCTCCTCTCGCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLISLDPN*PPLAER
Trigger: TCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCT...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGCACTTCAGCGTCCACTaGTCTCTGCTCAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGHFSVH*SLLRKV
Trigger: GACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTG...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTCCGTCATGGATAAATaGGTACCCTGCCTTAGGGGG +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGSVMDK*VPCLRG
Trigger: CCCCCTAAGGCAGGGTACCAATTTATCCATGACGGA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAGCCTGGACCCCAACTaGCCTCCTCTCGCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDESLDPN*PPLAER
Trigger: TCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS GCA 90 bp TCACTTTTTGCCCACTGCTGTGCCACTTCAGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTGTTTCCTAATACCACAATTGCTACC +
Preference number: 5 (lower is better)
Translates to: SLFAHCCATSASTCL*SERSILFPNTTIAT
Trigger: GGTAGCAATTGTGGTATTAGGAAACAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000443659.6
ENST00000614374.4
CDS GCA 90 bp TCACTTTTTGCCCACTGCTGTGCCACTTCAGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTGTTTCCTAATACCACAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: SLFAHCCATSASTCL*SERSILFPNTTIVA
Trigger: GGCAACAATTGTGGTATTAGGAAACAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412028.5
ENST00000415901.6
ENST00000437230.5
CDS-3UTR CAA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAAGCCTGGACCCCAACTaGCCTCCTCTCGCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQSLDPN*PPLAER
Trigger: TCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCT...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTTACTTTCTCACTTTTaGCCCACTGCTGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSLLSHF*PTAVPL
Trigger: AAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp ACATGTCCTGACCCAGCAGTTCTGTTTCTGTATGTCTCTTTCAGAGAAACTTATCACTTCAGCGTCCACTaGTCTCTGCTCAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: TCPDPAVLFLYVSFRETYHFSVH*SLLRKV
Trigger: GACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTG...ATAAGTTTCTCTGAAAGAGACATACAGAAACAGAACTGCTGGGTCAGGACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTGAATTAGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSELEFP*FFLPGK
Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCTAATTC...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTAGTCAGCCACATTGCTaGAGTCTTGCCAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSSQPHC*SLAKIF
Trigger: AAAGATTTTGGCAAGACTCAAGCAATGTGGCTGACT...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTGCACTGAGCTGAGATaGCACCACTTCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIICTELR*HHFTPA
Trigger: GGCTGGAGTGAAGTGGTGCAATCTCAGCTCAGTGCA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCCCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCCCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTCAGAAGCTCCACTCTTaGAAAGGATTCAAGGTTATT +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSQKLHS*KGFKVI
Trigger: AATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCTG...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCCACTTCAGCGTCCACTaGTCTCTGCTCAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIHFSVH*SLLRKV
Trigger: GACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTG...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCCACTTCAGCGTCCACTaGTCTCTGCTCAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSHFSVH*SLLRKV
Trigger: GACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTG...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGAATTAGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGELEFP*FFLPGK
Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCTAATTC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGAGTCAGCCACATTGCTaGAGTCTTGCCAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGSQPHC*SLAKIF
Trigger: AAAGATTTTGGCAAGACTCAAGCAATGTGGCTGACT...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GGATGTTCATTGCAGTCTGAAGCCTTGACCGTTCCAGTCTCTACTGAACTCAGCGATACGCTACATAAATaGGGGTTTCACAATTCTTAC +
Preference number: 5 (lower is better)
Translates to: GCSLQSEALTVPVSTELSDTLHK*GFHNSY
Trigger: GTAAGAATTGTGAAACCCCAATTTATGTAGCGTATC...GCTGAGTTCAGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAATGAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp ACATGTCCTGACCCAGCAGTTCTGTTTCTGTATGTCTCTTTCAGAGAAACTTATACAGCTGGATGTTCATaGCAGTCTGAAGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: TCPDPAVLFLYVSFRETYTAGCS*QSEALT
Trigger: GGTCAAGGCTTCAGACTGCAATGAACATCCAGCTGT...ATAAGTTTCTCTGAAAGAGACATACAGAAACAGAACTGCTGGGTCAGGACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATTTGGAGGTCCAGGTTTaGCCTGGCAACCTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYLEVQV*PGNLAL
Trigger: AAGAGCCAGGTTGCCAGGCAAAACCTGGACCTCCAA...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAACCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAACCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTCCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGTCTTGTATACATCTTCCATaGTTTCGCAATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: KRRSKQFALKYLVYQQGSCIHLP*FRNLPF
Trigger: GAATGGAAGATTGCGAAACAATGGAAGATGTATACA...AGACCCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTCACTTCAGCGTCCACTaGTCTCTGCTCAGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIHFSVH*SLLRKV
Trigger: GACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTG...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GTAATCTACATTCTTTTCTTCCAGCCGACCCCTTGGTGGGAAGTATTGCCACTCTGTACATTTAGACATTaGGGTTCAGTTGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: VIYILFFQPTPWWEVLPLCTFRH*GSVACS
Trigger: ACTACAAGCAACTGAACCCAAATGTCTAAATGTACA...GAGTGGCAATACTTCCCACCAAGGGGTCGGCTGGAAGAAAAGAATGTAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AATTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTGAGCTGCTTATGATTTaGAAGGGGTCAGGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: NWGFTILTLFVCHRRELLELLMI*KGSGRV
Trigger: CACCCTCCCTGACCCCTTCAAAATCATAAGCAGCTC...AAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAACCACAAACCACAACCTaGCAGCCCTTTCCCATCTTC +
Preference number: 5 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQPQTTT*QPFPIF
Trigger: GAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGG...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGTGTATACATCTTCCATaGTTTCGCAATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGCIHLP*FRNLPF
Trigger: GAATGGAAGATTGCGAAACAATGGAAGATGTATACA...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAAGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TTTCAAGAGGAGGAGCAAACAGTTTGCCCTCAAGTATCTGGTCTATCAACAGGGGACATTTGGGTTCAGTaGCTTGTAGTCTGTAAATTT +
Preference number: 5 (lower is better)
Translates to: FQEEEQTVCPQVSGLSTGDIWVQ*LVVCKF
Trigger: AAATTTACAGACTACAAGCAACTGAACCCAAATGTC...CCCTGTTGATAGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCCTCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTGCAGTCTGAAGCCTaGACCGTTCCAGTCTCTACT +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIILQSEA*TVPVST
Trigger: AGTAGAGACTGGAACGGTCAAGGCTTCAGACTGCAA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGAGCTAGACTCTGTCTaGCAGATTCCGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIELDSV*QIPRRK
Trigger: CTTCCTCCTCGGAATCTGCAAGACAGAGTCTAGCTC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTTACTTTCTCACTTTTaGCCCACTGCTGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLILLSHF*PTAVPL
Trigger: AAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGGAGGAGCAAACAGTTaGCCCTCAAGTATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQGGANS*PSSIWS
Trigger: AGACCAGATACTTGAGGGCAAACTGTTTGCTCCTCC...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS TCA 90 bp TTGTTTTTCCTCCCAGGCAAAGGAAAGCTTGATTTGCTCTGGGGTTaGGAAAGTTTACTGGCTAATAAAGTGAATGGTTCAATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFFLPGKGKLDLLWG*ESLLANKVNGSIRV
Trigger: AACTCTGATTGAACCATTCACTTTATTAGCCAGTAAACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCTGGGAGGAAAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTACTTTCTCACTTTTaGCCCACTGCTGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELLSHF*PTAVPL
Trigger: AAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATTACTTTCTCACTTTTaGCCCACTGCTGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKLLSHF*PTAVPL
Trigger: AAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTACTTTCTCACTTTTaGCCCACTGCTGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIILLSHF*PTAVPL
Trigger: AAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCGAATTAGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLIELEFP*FFLPGK
Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCTAATTC...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCTTACAGTCAGCCACATaGCTTGAGTCTTGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLILQSAT*LESCQN
Trigger: ATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTAA...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TTGGGGTTTCACAATTCTTACATTATTTGTCTGTCACAGAAGAGAGCTGCTTATGAGTTGCTCAGTGGATaGGTTCTATGTTGTGGACTA +
Preference number: 5 (lower is better)
Translates to: LGFHNSYIICLSQKRAAYELLSG*VLCCGL
Trigger: TAGTCCACAACATAGAACCAATCCACTGAGCAACTC...ATAAGCAGCTCTCTTCTGTGACAGACAAATAATGTAAGAATTGTGAAACCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCGTTTCGAAGATGGGTTaGATCACACATACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSVSKMG*ITHTLS
Trigger: CGACAAAGTATGTGTGATCAAACCCATCTTCGAAAC...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AGATACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCCTCATGTTAGCAAATTaGGGACGAAATCCGTATGCA +
Preference number: 5 (lower is better)
Translates to: RYSLPSRKYSFTVLKCLILMLAN*GRNPYA
Trigger: TGCATACGGATTTCGTCCCAAATTTGCTAACATGAG...GATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CAA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCCAGAAGCTCCACTCTTaGAAAGGATTCAAGGTTATT +
Preference number: 5 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSQKLHS*KGFKVI
Trigger: AATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCTG...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTTACTTTCTCACTTTTaGCCCACTGCTGTGCCACTT +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNILLSHF*PTAVPL
Trigger: AAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAGAATTAGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDEELEFP*FFLPGK
Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCTAATTC...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTGAATTAGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIIELEFP*FFLPGK
Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCTAATTC...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAAAGTCAGCCACATTGCTaGAGTCTTGCCAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDESQPHC*SLAKIF
Trigger: AAAGATTTTGGCAAGACTCAAGCAATGTGGCTGACT...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp TACAGTCTTCCTTCCAGAAAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTACAGTCAGCCACATaGCTTGAGTCTTGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: YSLPSRKYSFTVLKCLIILQSAT*LESCQN
Trigger: ATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTAA...AATGATTAGGCACTTAAGGACAGTAAAGCTGTATTTTCTGGAAGGAAGACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATTACAGTCAGCCACATaGCTTGAGTCTTGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDELQSAT*LESCQN
Trigger: ATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTAA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAATTACAGTCAGCCACATaGCTTGAGTCTTGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKLQSAT*LESCQN
Trigger: ATTTTGGCAAGACTCAAGCAATGTGGCTGACTGTAA...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTCCTGCCAAACAGGTCTaGGCAAATAAACATTCTGCT +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIPAKQV*ANKHSA
Trigger: AGCAGAATGTTTATTTGCCAAGACCTGTTTGGCAGG...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS-3UTR CAA 90 bp ACCTACTTAACACTACCTGGTACCTCAACTCATGCTAAACATTCTAATTTGAGCTGTATACATCTTCCATaGTTTCGCAATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: TYLTLPGTSTHAKHSNLSCIHLP*FRNLPF
Trigger: GAATGGAAGATTGCGAAACAATGGAAGATGTATACA...GCTCAAATTAGAATGTTTAGCATGAGTTGAGGTACCAGGTAGTGTTAAGTAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAACAGAAGCTCCACTCTTaGAAAGGATTCAAGGTTATT +
Preference number: 5 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKQKLHS*KGFKVI
Trigger: AATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCTG...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGAATTAGAGTTCCCTTaGTTTTTCCTCCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIELEFP*FFLPGK
Trigger: TTTGCCTGGGAGGAAAAACAAAGGGAACTCTAATTC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAAGTCAGCCACATTGCTaGAGTCTTGCCAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQSQPHC*SLAKIF
Trigger: AAAGATTTTGGCAAGACTCAAGCAATGTGGCTGACT...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAACTTTTCTTTTGCCTTTaGGTTGCCATTCGCAGATTC +
Preference number: 5 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQLFFCL*VAIRRF
Trigger: GAATCTGCGAATGGCAACCAAAAGGCAAAAGAAAAG...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAAGATGAATGTATACATCTTCCATaGTTTCGCAATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: SKAKSWVLVCLAKSPQDECIHLP*FRNLPF
Trigger: GAATGGAAGATTGCGAAACAATGGAAGATGTATACA...TTCATCTTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTCAGAAGCTCCACTCTTaGAAAGGATTCAAGGTTATT +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIQKLHS*KGFKVI
Trigger: AATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCTG...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp AAATACAGCTTTACTGTCCTTAAGTGCCTAATCATTTTCAAGAGGAGGAGCAAACAATTCTTACATTATTaGTCTGTCACAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: KYSFTVLKCLIIFKRRSKQFLHY*SVTEES
Trigger: GCTCTCTTCTGTGACAGACAAATAATGTAAGAATTG...TTTGCTCCTCCTCTTGAAAATGATTAGGCACTTAAGGACAGTAAAGCTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTTGATCACACATACTTaGTCGTACGTATCTACCCAA +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNILITHT*SYVSTQ
Trigger: TTGGGTAGATACGTACGACAAAGTATGTGTGATCAA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTGTAAAGAAACTCCAATaGAGTGTTGTTTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNIVKKLQ*SVVCWE
Trigger: CTCCCAACAAACAACACTCAATTGGAGTTTCTTTAC...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425478.7
CDS-3UTR CAA 90 bp AATTTGAGCAAAGCTAAATCATGGGTCTTAGTCTGTTTAGCAAAATCTCCACAATGTATACATCTTCCATaGTTTCGCAATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: NLSKAKSWVLVCLAKSPQCIHLP*FRNLPF
Trigger: GAATGGAAGATTGCGAAACAATGGAAGATGTATACA...TTGTGGAGATTTTGCTAAACAGACTAAGACCCATGATTTAGCTTTGCTCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS-3UTR CAA 90 bp GAGAAACAACACAAACTCAGACATCTAAGTCAGATCAAATTAGAGCCCAATATTTGTATACATCTTCCATaGTTTCGCAATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: EKQHKLRHLSQIKLEPNICIHLP*FRNLPF
Trigger: GAATGGAAGATTGCGAAACAATGGAAGATGTATACA...AATATTGGGCTCTAATTTGATCTGACTTAGATGTCTGAGTTTGTGTTGTTTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000388759.7
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS CCA 72 bp CGACGCCCCGACTCCGCGAAGGCCTCCCTGGGAGGCTaGGGAAGCGTCGGGGGATCTCTCAGCGCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: RRPDSAKASLGG*GSVGGSLSAAL
Trigger: CAGAGCTGCGCTGAGAGATCCCCCGACGCTTCCCCAGCCTCCCAGGGAGGCCTTCGCGGAGTCGGGGCGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS TCA 72 bp TGGGGCCTGCTGGAGGAGCTTCACGCAGTCTGGAGCTaGAGGGACACAGCGAGCGCCCCGACCCGCGACGCC +
Preference number: 6 (lower is better)
Translates to: WGLLEELHAVWS*RDTASAPTRDA
Trigger: GGCGTCGCGGGTCGGGGCGCTCGCTGTGTCCCTTCAGCTCCAGACTGCGTGAAGCTCCTCCAGCAGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS CCA 72 bp GACAGCGGCTCCACCGCGGTACGCGGCCACCGGCTTTaGAGCCTGGACCCCAACTTGCCTCCTCTCGCGGAG +
Preference number: 6 (lower is better)
Translates to: DSGSTAVRGHRL*SLDPNLPPLAE
Trigger: CTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTACCGCGGTGGAGCCGCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS CCA 72 bp GCTGGGGAAGCGTCGGGGGATCTCTCAGCGCAGCTCTaGGGCCCAGATTTCTGCGCCCGTCGTGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: AGEASGDLSAQL*GPDFCARRAVA
Trigger: GGCCACCGCACGACGGGCGCAGAAATCTGGGCCCCAGAGCTGCGCTGAGAGATCCCCCGACGCTTCCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS GCA 72 bp TACGCGGCCACCGGCTTTGGAGCCTGGACCCCAACTTaGCTCCTCTCGCGGAGAGACAGTCGCCGACGCTCG +
Preference number: 6 (lower is better)
Translates to: YAATGFGAWTPT*LLSRRDSRRRS
Trigger: CGAGCGTCGGCGACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS CCA 72 bp GCTCCACCGCGGTACGCGGCCACCGGCTTTGGAGCCTaGACCCCAACTTGCCTCCTCTCGCGGAGAGACAGT +
Preference number: 6 (lower is better)
Translates to: APPRYAATGFGA*TPTCLLSRRDS
Trigger: ACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTACCGCGGTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS CAA 72 bp GTACGCGGCCACCGGCTTTGGAGCCTGGACCCCAACTaGCCTCCTCTCGCGGAGAGACAGTCGCCGACGCTC +
Preference number: 6 (lower is better)
Translates to: VRGHRLWSLDPN*PPLAERQSPTL
Trigger: GAGCGTCGGCGACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS CAA 90 bp AGACCTCAAAGACAGCGGCTCCACCGCGGTACGCGGCCACCGGCTTaGGAGCCTGGACCCCAACTTGCCTCCTCTCGCGGAGAGACAGTC +
Preference number: 6 (lower is better)
Translates to: RPQRQRLHRGTRPPA*EPGPQLASSRGETV
Trigger: GACTGTCTCTCCGCGAGAGGAGGCAAGTTGGGGTCCAGGCTCCAAAGCCGGTGGCCGCGTACCGCGGTGGAGCCGCTGTCTTTGAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388759.7
ENST00000415901.6
ENST00000416026.2
ENST00000425478.7
ENST00000437230.5
CDS GCA 72 bp GAGCTAGACTCTGTCTTGCAGATTCCGAGGAGGAAGTaGAGGACGAGGGCGTGCTGCAGGCCGGAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: ELDSVLQIPRRK*RTRACCRPEEA
Trigger: CGCCTCCTCCGGCCTGCAGCACGCCCTCGTCCTGCACTTCCTCCTCGGAATCTGCAAGACAGAGTCTAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS TCA 72 bp TGGGGCTTTCCCGAAGGGATACGCTCGAAGGAGCTCTaGGGTGCTTCGATCCCGAGCGACTCCCCGCAGACT +
Preference number: 6 (lower is better)
Translates to: WGFPEGIRSKEL*GASIPSDSPQT
Trigger: AGTCTGCGGGGAGTCGCTCGGGATCGAAGCACCTCAGAGCTCCTTCGAGCGTATCCCTTCGGGAAAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS CCA 72 bp CTGAGGTGCTTCGATCCCGAGCGACTCCCCGCAGACTaGGTAGCACCGCCCCTGTTAGGATGCCGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: LRCFDPERLPAD*VAPPLLGCRLF
Trigger: AAACAGACGGCATCCTAACAGGGGCGGTGCTACCCAGTCTGCGGGGAGTCGCTCGGGATCGAAGCACCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS GCA 72 bp CTTTCCCGAAGGGATACGCTCGAAGGAGCTCTGAGGTaGTTCGATCCCGAGCGACTCCCCGCAGACTGGGTA +
Preference number: 6 (lower is better)
Translates to: LSRRDTLEGALR*FDPERLPADWV
Trigger: TACCCAGTCTGCGGGGAGTCGCTCGGGATCGAAGCACCTCAGAGCTCCTTCGAGCGTATCCCTTCGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421515.6
CDS GCA 72 bp GGTTCTCATGTTAGCAAATTTGGGACGAAATCCGTATaGAGAAAAAGCGCCGGGCCGCCCGCAATCCACCCA +
Preference number: 6 (lower is better)
Translates to: GSHVSKFGTKSV*RKSAGPPAIHP
Trigger: TGGGTGGATTGCGGGCGGCCCGGCGCTTTTTCTGCATACGGATTTCGTCCCAAATTTGCTAACATGAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS GCA 72 bp ACCTCCCACAGTCTTACTTTCTCACTTTTTGCCCACTaGTGTGCCACTTCAGCGTCCACTTGTCTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: TSHSLTFSLFAH*CATSASTCLCS
Trigger: TGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAAAGTGAGAAAGTAAGACTGTGGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS GCA 72 bp GCCCACTGCTGTGCCACTTCAGCGTCCACTTGTCTCTaGTCAGAAAGGTCGATTTTGTTTCCTAATACCACA +
Preference number: 6 (lower is better)
Translates to: AHCCATSASTCL*SERSILFPNTT
Trigger: TGTGGTATTAGGAAACAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS GCA 72 bp CTGCTTACTGCCCATTTCCAAGAAGGCCAAAAATTCTaGGTTGTTTCCTGCTGCATCCCCAGCAACTATGCC +
Preference number: 6 (lower is better)
Translates to: LLTAHFQEGQKF*VVSCCIPSNYA
Trigger: GGCATAGTTGCTGGGGATGCAGCAGGAAACAACGCAGAATTTTTGGCCTTCTTGGAAATGGGCAGTAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS CAA 72 bp TTACTGCCCATTTCCAAGAAGGCCAAAAATTCTGCGTaGTTTCCTGCTGCATCCCCAGCAACTATGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLPISKKAKNSA*FPAASPATMPG
Trigger: GCCAGGCATAGTTGCTGGGGATGCAGCAGGAAACAACGCAGAATTTTTGGCCTTCTTGGAAATGGGCAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS GCA 72 bp TTTTCCCCACAGATAACAATCCACAAACCACAACCTTaGAGCCCTTTCCCATCTTCTCTCAGGATATCACTG +
Preference number: 6 (lower is better)
Translates to: FSPQITIHKPQP*SPFPSSLRISL
Trigger: CAGTGATATCCTGAGAGAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGGATTGTTATCTGTGGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000614374.4
CDS GCA 72 bp TTTTCCCCACAGATAACAATCCACAAACCACAACCTTaGAGCCCTTTCCCATCTTCTCTCAGGATATCATTC +
Preference number: 6 (lower is better)
Translates to: FSPQITIHKPQP*SPFPSSLRISF
Trigger: GAATGATATCCTGAGAGAAGATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGGATTGTTATCTGTGGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS GCA 72 bp CTTTCCCATCTTCTCTCAGGATATCATTCTGCTTACTaGCCATTTCCAAGAAGGCCAAAAATTCTGCGTTGT +
Preference number: 6 (lower is better)
Translates to: LSHLLSGYHSAY*PFPRRPKILRC
Trigger: ACAACGCAGAATTTTTGGCCTTCTTGGAAATGGGCAGTAAGCAGAATGATATCCTGAGAGAAGATGGGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443659.6
CDS CAA 90 bp TTTGTCTTTGAACTTATCGATTTCTTTCTTCAGAAGCTCCACTCTTaGAAAGGATTCAAGGTTATTCACACTGTACACAAGAACGAAGCC +
Preference number: 6 (lower is better)
Translates to: FVFELIDFFLQKLHS*KGFKVIHTVHKNEA
Trigger: GGCTTCGTTCTTGTGTACAGTGTGAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCTGAAGAAAGAAATCGATAAGTTCAAAGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4
CDS CAA 72 bp GAACTTATCGATTTCTTTCTTCAGAAGCTCCACTCTTaGAAAGGATTCAAGGTTATTCACACTGTACACAAG +
Preference number: 6 (lower is better)
Translates to: ELIDFFLQKLHS*KGFKVIHTVHK
Trigger: CTTGTGTACAGTGTGAATAACCTTGAATCCTTTCAAAGAGTGGAGCTTCTGAAGAAAGAAATCGATAAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388759.7
ENST00000412028.5
ENST00000415901.6
ENST00000416026.2
ENST00000421515.6
ENST00000425478.7
ENST00000437230.5
ENST00000443659.6
ENST00000614374.4