RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKILA (Homo sapiens)

Ensembl gene IDs: ENSG00000278709

Ensembl transcript IDs: ENST00000613231.1, ENST00000614771.2

Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGGCCCCGGGCGTGCGCCGGGCAGGCGTTCCAAGCTGACCGCCGTTaGGGAGAGGGCACAGCGCCCCTCCTCCGTTGCGCGGGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: RPRACAGQAFQADRR*GEGTAPLLRCAGAG
Trigger: CCCGGCACCCGCGCAACGGAGGAGGGGCGCTGTGCCCTCTCCCCAACGGCGGTCAGCTTGGAACGCCTGCCCGGCGCACGCCCGGGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CCA 90 bp CCAGGTCTCCCGAGACTTCCCGGAGGGCAGGGGCTGTGTCTGGAGTaGCTGAATTCCCCGGCTCAGGGTTGCAGCTCAGCCAGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: PGLPRLPGGQGLCLE*LNSPAQGCSSASLL
Trigger: CAACAAACTGGCTGAGCTGCAACCCTGAGCCGGGGAATTCAGCCACTCCAGACACAGCCCCTGCCCTCCGGGAAGTCTCGGGAGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp TCCTCCTTGGGTTCGGGTGAAAGCGCTTGGGGGTTCAGTGGGCCATaGTCCCCGAGCTGCTGGAGAACTGAAGGCGGACAGTCTCCTGCG +
Preference number: 5 (lower is better)
Translates to: SSLGSGESAWGFSGP*SPSCWRTEGGQSPA
Trigger: CGCAGGAGACTGTCCGCCTTCAGTTCTCCAGCAGCTCGGGGATCATGGCCCACTGAACCCCCAAGCGCTTTCACCCGAACCCAAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CCA 90 bp TGGGCAGCAGACAATGGGTGTGGATTCGCCCCAGGTCCCGCCGGCTaGGGCGGCGACAATACACCAGTCCCCGACAGCTATTTACATGAC +
Preference number: 5 (lower is better)
Translates to: WAADNGCGFAPGPAG*GGDNTPVPDSYLHD
Trigger: GTCATGTAAATAGCTGTCGGGGACTGGTGTATTGTCGCCGCCCCAGCCGGCGGGACCTGGGGCGAATCCACACCCATTGTCTGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 90 bp CCTCCTGGTCTTTCTGGGAGAGCTCTGGCAGCATCACTGTGCCTGTaGAGGGAGAGCGGGAACCCACTTCCTGCACCGGCTTTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PPGLSGRALAASLCL*RESGNPLPAPAFSE
Trigger: CTCAGAGAAAGCCGGTGCAGGAAGTGGGTTCCCGCTCTCCCTGCACAGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp CGCTTGGGGGTTCAGTGGGCCATGATCCCCGAGCTGCTGGAGAACTaGAGGCGGACAGTCTCCTGCGAAACCAGGCAATGGGTGATCCAT +
Preference number: 5 (lower is better)
Translates to: RLGVQWAMIPELLEN*RRTVSCETRQWVIH
Trigger: ATGGATCACCCATTGCCTGGTTTCGCAGGAGACTGTCCGCCTTCAGTTCTCCAGCAGCTCGGGGATCATGGCCCACTGAACCCCCAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CCA 90 bp ATGACAAGGGCTTCCGGGCGTGTCTACGCGAGTTCCCGTCTTTCCTaGTCGTCCTCCTTGGGTTCGGGTGAAAGCGCTTGGGGGTTCAGT +
Preference number: 5 (lower is better)
Translates to: MTRASGRVYASSRLS*SSSLGSGESAWGFS
Trigger: ACTGAACCCCCAAGCGCTTTCACCCGAACCCAAGGAGGACGACCAGGAAAGACGGGAACTCGCGTAGACACGCCCGGAAGCCCTTGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS TCA 90 bp CCAAGAGTGAGCTTCTCCTCCCAAACAGAAGACGGTCAGTGCCTCTaGACCTCCCTCTGGGCTGGGCACGCTTGGACTCCTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PRVSFSSQTEDGQCL*TSLWAGHAWTPPKS
Trigger: GCTCTTTGGAGGAGTCCAAGCGTGCCCAGCCCAGAGGGAGGTTCAGAGGCACTGACCGTCTTCTGTTTGGGAGGAGAAGCTCACTCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 90 bp ACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCTaGGAGAGCTCTGGCAGCATCACTGTGCCTGTGCAGGGAGAGCGG +
Preference number: 5 (lower is better)
Translates to: TSLGLTSPEQASWSF*ESSGSITVPVQGER
Trigger: CCGCTCTCCCTGCACAGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTGGAGAAGTCAAGCCCAGGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 90 bp CTGGGCACACACGAAGCCTCCTATGAGTGCTGGCAGTCCAGCCTATaGTCCTTCCAAAGCAATTCTCCTTTCCTACTGCCCCGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LGTHEASYECWQSSL*SFQSNSPFLLPRQG
Trigger: CCCCTGACGGGGCAGTAGGAAAGGAGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTGTGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 90 bp CTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTaGCAGCATCACTGTGCCTGTGCAGGGAGAGCGGGAACCCACTTC +
Preference number: 5 (lower is better)
Translates to: LDFSRTSLLVFLGEL*QHHCACAGRAGTHF
Trigger: GAAGTGGGTTCCCGCTCTCCCTGCACAGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTGGAGAAGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp ACTCCTCCAAAGAGCTTGGACCAGCCTGAGCCACATCCCTGGGCTTaGCTTCTCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: TPPKSLDQPEPHPWA*LLQNKPPGLSGRAL
Trigger: CAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTGGAGAAGTCAAGCCCAGGGATGTGGCTCAGGCTGGTCCAAGCTCTTTGGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp GCGGGAACCCACTTCCTGCACCGGCTTTCTCTGAGTTCTTCAGGATaGATTCGCTCTGGTCTAGGTAAGTTCTACCCCGAGGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: AGTHFLHRLSLSSSG*IRSGLGKFYPEATF
Trigger: GAAGGTGGCCTCGGGGTAGAACTTACCTAGACCAGAGCGAATTCATCCTGAAGAACTCAGAGAAAGCCGGTGCAGGAAGTGGGTTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 90 bp GGCAGTCCAGCCTATGCTCCTTCCAAAGCAATTCTCCTTTCCTACTaGCCCGTCAGGGGCCCTGTCTGTGCTGGAATCATCATTGTCCTC +
Preference number: 5 (lower is better)
Translates to: GSPAYAPSKAILLSY*PVRGPVCAGIIIVL
Trigger: GAGGACAATGATGATTCCAGCACAGACAGGGCCCCTGACGGGGCAGTAGGAAAGGAGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp CCTCCATTGTGTAAATGCCATCTCACTTCCAAGACAATCAACGTGTaGCTTCTCCCAGCCAGACTAGCCAGGTCTCCCGAGACTTCCCGG +
Preference number: 5 (lower is better)
Translates to: PPLCKCHLTSKTINV*LLPARLARSPETSR
Trigger: CCGGGAAGTCTCGGGAGACCTGGCTAGTCTGGCTGGGAGAAGTCACACGTTGATTGTCTTGGAAGTGAGATGGCATTTACACAATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp CCTGTATTTAATTCTCGCAGTCCTGGGCACACACGAAGCCTCCTATaGGTGCTGGCAGTCCAGCCTATGCTCCTTCCAAAGCAATTCTCC +
Preference number: 5 (lower is better)
Translates to: PVFNSRSPGHTRSLL*VLAVQPMLLPKQFS
Trigger: GGAGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTGTGTGCCCAGGACTGCGAGAATTAAATACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 90 bp GCTCCACCACTGTGTGACTTTCAACAAGCGACTTCCTTGACCAGCTaGCCGCTCTGTAAAATGGGGAGAGTAATATTCGGCCACACTGAG +
Preference number: 5 (lower is better)
Translates to: APPLCDFQQATSLTS*PLCKMGRVIFGHTE
Trigger: CTCAGTGTGGCCGAATATTACTCTCCCCATTTTACAGAGCGGGCAGCTGGTCAAGGAAGTCGCTTGTTGAAAGTCACACAGTGGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp CAGCTATGTCCCACTCATCTTTGGGTGACCCTCAGGTTCGGACCCTaGGGTCTGAACACTGCATTAAGCTCTCCAGACAGAATCAACTTC +
Preference number: 5 (lower is better)
Translates to: QLCPTHLWVTLRFGP*GLNTALSSPDRINF
Trigger: GAAGTTGATTCTGTCTGGAGAGCTTAATGCAGTGTTCAGACCTCAGGGTCCGAACCTGAGGGTCACCCAAAGATGAGTGGGACATAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 90 bp TTAATTCTCGCAGTCCTGGGCACACACGAAGCCTCCTATGAGTGCTaGCAGTCCAGCCTATGCTCCTTCCAAAGCAATTCTCCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: LILAVLGTHEASYEC*QSSLCSFQSNSPFL
Trigger: TAGGAAAGGAGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTGTGTGCCCAGGACTGCGAGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 90 bp TATTTAATTCTCGCAGTCCTGGGCACACACGAAGCCTCCTATGAGTaGTGGCAGTCCAGCCTATGCTCCTTCCAAAGCAATTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: YLILAVLGTHEASYE*WQSSLCSFQSNSPF
Trigger: GAAAGGAGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTGTGTGCCCAGGACTGCGAGAATTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 90 bp CACCATCAGCACTCAATAAATGGTAGCCACTGCCGGTGTCGCAGATaGATCAATGGGAGGTCAAGCGTTGTGGGTAGGTTTGGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: HHQHSINGSHCRCRR*INGRSSVVGRFGFF
Trigger: AAAGAAACCAAACCTACCCACAACGCTTGACCTCCCATTGATCCATCTGCGACACCGGCAGTGGCTACCATTTATTGAGTGCTGATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp GCTGAATTCCCCGGCTCAGGGTTGCAGCTCAGCCAGTTTGTTGATTaGATGAATGAAGAAATGGCTGAAAGCAGGGGTGGTAATGATGAC +
Preference number: 5 (lower is better)
Translates to: AEFPGSGLQLSQFVD*MNEEMAESRGGNDD
Trigger: GTCATCATTACCACCCCTGCTTTCAGCCATTTCTTCATTCATTCAATCAACAAACTGGCTGAGCTGCAACCCTGAGCCGGGGAATTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp ATGGGAGGTCAAGCGTTGTGGGTAGGTTTGGTTTCTTTAAGCCACTaGATTAACTGGTTATTTTTGCCTGCTGGCAGTGCAGCCTCCATT +
Preference number: 5 (lower is better)
Translates to: MGGQALWVGLVSLSH*INWLFLPAGSAASI
Trigger: AATGGAGGCTGCACTGCCAGCAGGCAAAAATAACCAGTTAATTCAGTGGCTTAAAGAAACCAAACCTACCCACAACGCTTGACCTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 90 bp AAAATGGGGAGAGTAATATTCGGCCACACTGAGTCGGTGTCAGGTTaGGTTAATATTTGGAGAGTTTCTGGCACAGGTAGGTGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: KMGRVIFGHTESVSG*VNIWRVSGTGRCSL
Trigger: TAAGGAGCACCTACCTGTGCCAGAAACTCTCCAAATATTAACTCAACCTGACACCGACTCAGTGTGGCCGAATATTACTCTCCCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 72 bp CGGCTGGCACCGAGTTCGGCTCCCCGGCCCCGGGCGTaGGCCGGGCAGGCGTTCCAAGCTGACCGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: RLAPSSAPRPRA*AGQAFQADRRW
Trigger: CCAACGGCGGTCAGCTTGGAACGCCTGCCCGGCGCACGCCCGGGGCCGGGGAGCCGAACTCGGTGCCAGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CCA 72 bp GCGTGCGCCGGGCAGGCGTTCCAAGCTGACCGCCGTTaGGGAGAGGGCACAGCGCCCCTCCTCCGTTGCGCG +
Preference number: 6 (lower is better)
Translates to: ACAGQAFQADRR*GEGTAPLLRCA
Trigger: CGCGCAACGGAGGAGGGGCGCTGTGCCCTCTCCCCAACGGCGGTCAGCTTGGAACGCCTGCCCGGCGCACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS GCA 72 bp GGGAGAGGGCACAGCGCCCCTCCTCCGTTGCGCGGGTaGCGGGTCTACGTGGGCCGCCTAGCTCTGGCCCTT +
Preference number: 6 (lower is better)
Translates to: GRGHSAPPPLRG*RVYVGRLALAL
Trigger: AAGGGCCAGAGCTAGGCGGCCCACGTAGACCCGGCACCCGCGCAACGGAGGAGGGGCGCTGTGCCCTCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp CCGAGACTTCCCGGAGGGCAGGGGCTGTGTCTGGAGTaGCTGAATTCCCCGGCTCAGGGTTGCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PRLPGGQGLCLE*LNSPAQGCSSA
Trigger: GGCTGAGCTGCAACCCTGAGCCGGGGAATTCAGCCACTCCAGACACAGCCCCTGCCCTCCGGGAAGTCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp GACAATGGGTGTGGATTCGCCCCAGGTCCCGCCGGCTaGGGCGGCGACAATACACCAGTCCCCGACAGCTAT +
Preference number: 6 (lower is better)
Translates to: DNGCGFAPGPAG*GGDNTPVPDSY
Trigger: ATAGCTGTCGGGGACTGGTGTATTGTCGCCGCCCCAGCCGGCGGGACCTGGGGCGAATCCACACCCATTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp GGTTCGGGTGAAAGCGCTTGGGGGTTCAGTGGGCCATaGTCCCCGAGCTGCTGGAGAACTGAAGGCGGACAG +
Preference number: 6 (lower is better)
Translates to: GSGESAWGFSGP*SPSCWRTEGGQ
Trigger: CTGTCCGCCTTCAGTTCTCCAGCAGCTCGGGGATCATGGCCCACTGAACCCCCAAGCGCTTTCACCCGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS GCA 72 bp CTTTCTGGGAGAGCTCTGGCAGCATCACTGTGCCTGTaGAGGGAGAGCGGGAACCCACTTCCTGCACCGGCT +
Preference number: 6 (lower is better)
Translates to: LSGRALAASLCL*RESGNPLPAPA
Trigger: AGCCGGTGCAGGAAGTGGGTTCCCGCTCTCCCTGCACAGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp GCTTCCGGGCGTGTCTACGCGAGTTCCCGTCTTTCCTaGTCGTCCTCCTTGGGTTCGGGTGAAAGCGCTTGG +
Preference number: 6 (lower is better)
Translates to: ASGRVYASSRLS*SSSLGSGESAW
Trigger: CCAAGCGCTTTCACCCGAACCCAAGGAGGACGACCAGGAAAGACGGGAACTCGCGTAGACACGCCCGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CCA 72 bp TCTACGCGAGTTCCCGTCTTTCCTGGTCGTCCTCCTTaGGTTCGGGTGAAAGCGCTTGGGGGTTCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: STRVPVFPGRPP*VRVKALGGSVG
Trigger: GCCCACTGAACCCCCAAGCGCTTTCACCCGAACCCAAGGAGGACGACCAGGAAAGACGGGAACTCGCGTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CAA 72 bp GTCTACGCGAGTTCCCGTCTTTCCTGGTCGTCCTCCTaGGGTTCGGGTGAAAGCGCTTGGGGGTTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: VYASSRLSWSSS*GSGESAWGFSG
Trigger: CCCACTGAACCCCCAAGCGCTTTCACCCGAACCCAAGGAGGACGACCAGGAAAGACGGGAACTCGCGTAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS TCA 72 bp GTTCAGTGGGCCATGATCCCCGAGCTGCTGGAGAACTaGAGGCGGACAGTCTCCTGCGAAACCAGGCAATGG +
Preference number: 6 (lower is better)
Translates to: VQWAMIPELLEN*RRTVSCETRQW
Trigger: CCATTGCCTGGTTTCGCAGGAGACTGTCCGCCTTCAGTTCTCCAGCAGCTCGGGGATCATGGCCCACTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS TCA 72 bp AGCTTCTCCTCCCAAACAGAAGACGGTCAGTGCCTCTaGACCTCCCTCTGGGCTGGGCACGCTTGGACTCCT +
Preference number: 6 (lower is better)
Translates to: SFSSQTEDGQCL*TSLWAGHAWTP
Trigger: AGGAGTCCAAGCGTGCCCAGCCCAGAGGGAGGTTCAGAGGCACTGACCGTCTTCTGTTTGGGAGGAGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp TCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTaGCAGCATCACTGTGCCTGTGCAGGGAGAGCGGGA +
Preference number: 6 (lower is better)
Translates to: SRTSLLVFLGEL*QHHCACAGRAG
Trigger: TCCCGCTCTCCCTGCACAGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp AGGGTCCTGGGTTGGCACACAGGCTCCACCACTGTGTaGCTTTCAACAAGCGACTTCCTTGACCAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RVLGWHTGSTTV*LSTSDFLDQLP
Trigger: GGGCAGCTGGTCAAGGAAGTCGCTTGTTGAAAGTCACACAGTGGTGGAGCCTGTGTGCCAACCCAGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 72 bp CTCCAATTTCTCTTCCCTGAGCCCCCAGGGACCTTGTaGTCCTCAGAAGATAGGCTAGCCCCAAGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: LQFLFPEPPGTL*SSEDRLAPRAW
Trigger: CCAGGCTCTTGGGGCTAGCCTATCTTCTGAGGAGCACAAGGTCCCTGGGGGCTCAGGGAAGAGAAATTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS TCA 72 bp AGGGGTGGTAATGATGACCTCCTTCACCCTAGGAAGTaGATGGGACCCAGGTCATCTCCAGGCCCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: RGGNDDLLHPRK*MGPRSSPGPAS
Trigger: ACTGGCTGGGCCTGGAGATGACCTGGGTCCCATTCACTTCCTAGGGTGAAGGAGGTCATCATTACCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 72 bp CTCGCAGTCCTGGGCACACACGAAGCCTCCTATGAGTaGTGGCAGTCCAGCCTATGCTCCTTCCAAAGCAAT +
Preference number: 6 (lower is better)
Translates to: LAVLGTHEASYE*WQSSLCSFQSN
Trigger: ATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTGTGTGCCCAGGACTGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CAA 72 bp CTCAGCCGAGGTCACACAGCTATGTCCCACTCATCTTaGGGTGACCCTCAGGTTCGGACCCTGAGGTCTGAA +
Preference number: 6 (lower is better)
Translates to: LSRGHTAMSHSS*GDPQVRTLRSE
Trigger: TTCAGACCTCAGGGTCCGAACCTGAGGGTCACCCAAAGATGAGTGGGACATAGCTGTGTGACCTCGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 72 bp GCCTATGCTCCTTCCAAAGCAATTCTCCTTTCCTACTaGCCCGTCAGGGGCCCTGTCTGTGCTGGAATCATC +
Preference number: 6 (lower is better)
Translates to: AYAPSKAILLSY*PVRGPVCAGII
Trigger: GATGATTCCAGCACAGACAGGGCCCCTGACGGGGCAGTAGGAAAGGAGAATTGCTTTGGAAGGAGCATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp ACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTaGTCTTTCTGGGAGAGCTCTGGCAGCATCACTGTG +
Preference number: 6 (lower is better)
Translates to: TSLGLTSPEQAS*SFWESSGSITV
Trigger: CACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTGGAGAAGTCAAGCCCAGGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp GCAGTCCTGGGCACACACGAAGCCTCCTATGAGTGCTaGCAGTCCAGCCTATGCTCCTTCCAAAGCAATTCT +
Preference number: 6 (lower is better)
Translates to: AVLGTHEASYEC*QSSLCSFQSNS
Trigger: AGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTGTGTGCCCAGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CAA 72 bp TTTCTCCAATTTCTCTTCCCTGAGCCCCCAGGGACCTaGTGCTCCTCAGAAGATAGGCTAGCCCCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: FLQFLFPEPPGT*CSSEDRLAPRA
Trigger: GGCTCTTGGGGCTAGCCTATCTTCTGAGGAGCACAAGGTCCCTGGGGGCTCAGGGAAGAGAAATTGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613231.1
ENST00000614771.2
CDS CAA 90 bp GTGAAAGCACTCAGCCGAGGTCACACAGCTATGTCCCACTCATCTTaGGGTGACCCTCAGGTTCGGACCCTGAGGTCTGAACACTGCATT +
Preference number: 6 (lower is better)
Translates to: VKALSRGHTAMSHSS*GDPQVRTLRSEHCI
Trigger: AATGCAGTGTTCAGACCTCAGGGTCCGAACCTGAGGGTCACCCAAAGATGAGTGGGACATAGCTGTGTGACCTCGGCTGAGTGCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp CCCACTCATCTTTGGGTGACCCTCAGGTTCGGACCCTaGGGTCTGAACACTGCATTAAGCTCTCCAGACAGA +
Preference number: 6 (lower is better)
Translates to: PTHLWVTLRFGP*GLNTALSSPDR
Trigger: TCTGTCTGGAGAGCTTAATGCAGTGTTCAGACCTCAGGGTCCGAACCTGAGGGTCACCCAAAGATGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 72 bp CACGAAGCCTCCTATGAGTGCTGGCAGTCCAGCCTATaGTCCTTCCAAAGCAATTCTCCTTTCCTACTGCCC +
Preference number: 6 (lower is better)
Translates to: HEASYECWQSSL*SFQSNSPFLLP
Trigger: GGGCAGTAGGAAAGGAGAATTGCTTTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGGCTTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CAA 90 bp GGCACACAGGCTCCACCACTGTGTGACTTTCAACAAGCGACTTCCTaGACCAGCTGCCCGCTCTGTAAAATGGGGAGAGTAATATTCGGC +
Preference number: 6 (lower is better)
Translates to: GTQAPPLCDFQQATS*TSCPLCKMGRVIFG
Trigger: GCCGAATATTACTCTCCCCATTTTACAGAGCGGGCAGCTGGTCAAGGAAGTCGCTTGTTGAAAGTCACACAGTGGTGGAGCCTGTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp GGCATCGATCCCTTCATTCCTCGCAATCACACCACGTaGAGGTGCCATGAAGCCACCCCATTTTGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: GIDPFIPRNHTT*RCHEATPFCRR
Trigger: TCTTCTGCAAAATGGGGTGGCTTCATGGCACCTTCACGTGGTGTGATTGCGAGGAATGAAGGGATCGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS GCA 72 bp GGTGACCCTCAGGTTCGGACCCTGAGGTCTGAACACTaGATTAAGCTCTCCAGACAGAATCAACTTCGGAAC +
Preference number: 6 (lower is better)
Translates to: GDPQVRTLRSEH*IKLSRQNQLRN
Trigger: GTTCCGAAGTTGATTCTGTCTGGAGAGCTTAATGCAGTGTTCAGACCTCAGGGTCCGAACCTGAGGGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CAA 72 bp GCTCCACCACTGTGTGACTTTCAACAAGCGACTTCCTaGACCAGCTGCCCGCTCTGTAAAATGGGGAGAGTA +
Preference number: 6 (lower is better)
Translates to: APPLCDFQQATS*TSCPLCKMGRV
Trigger: TACTCTCCCCATTTTACAGAGCGGGCAGCTGGTCAAGGAAGTCGCTTGTTGAAAGTCACACAGTGGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp CACTTCCTGCACCGGCTTTCTCTGAGTTCTTCAGGATaGATTCGCTCTGGTCTAGGTAAGTTCTACCCCGAG +
Preference number: 6 (lower is better)
Translates to: HFLHRLSLSSSG*IRSGLGKFYPE
Trigger: CTCGGGGTAGAACTTACCTAGACCAGAGCGAATTCATCCTGAAGAACTCAGAGAAAGCCGGTGCAGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp CCCGGCTCAGGGTTGCAGCTCAGCCAGTTTGTTGATTaGATGAATGAAGAAATGGCTGAAAGCAGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: PGSGLQLSQFVD*MNEEMAESRGG
Trigger: ACCACCCCTGCTTTCAGCCATTTCTTCATTCATTCAATCAACAAACTGGCTGAGCTGCAACCCTGAGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp TGTAAATGCCATCTCACTTCCAAGACAATCAACGTGTaGCTTCTCCCAGCCAGACTAGCCAGGTCTCCCGAG +
Preference number: 6 (lower is better)
Translates to: CKCHLTSKTINV*LLPARLARSPE
Trigger: CTCGGGAGACCTGGCTAGTCTGGCTGGGAGAAGTCACACGTTGATTGTCTTGGAAGTGAGATGGCATTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CCA 72 bp CACTCAATAAATGGTAGCCACTGCCGGTGTCGCAGATaGATCAATGGGAGGTCAAGCGTTGTGGGTAGGTTT +
Preference number: 6 (lower is better)
Translates to: HSINGSHCRCRR*INGRSSVVGRF
Trigger: AAACCTACCCACAACGCTTGACCTCCCATTGATCCATCTGCGACACCGGCAGTGGCTACCATTTATTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp AGAGTAATATTCGGCCACACTGAGTCGGTGTCAGGTTaGGTTAATATTTGGAGAGTTTCTGGCACAGGTAGG +
Preference number: 6 (lower is better)
Translates to: RVIFGHTESVSG*VNIWRVSGTGR
Trigger: CCTACCTGTGCCAGAAACTCTCCAAATATTAACTCAACCTGACACCGACTCAGTGTGGCCGAATATTACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS CAA 72 bp ACTGGTTATTTTTGCCTGCTGGCAGTGCAGCCTCCATaGTGTAAATGCCATCTCACTTCCAAGACAATCAAC +
Preference number: 6 (lower is better)
Translates to: TGYFCLLAVQPP*CKCHLTSKTIN
Trigger: GTTGATTGTCTTGGAAGTGAGATGGCATTTACACAATGGAGGCTGCACTGCCAGCAGGCAAAAATAACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614771.2
CDS TCA 72 bp CAAGCGTTGTGGGTAGGTTTGGTTTCTTTAAGCCACTaGATTAACTGGTTATTTTTGCCTGCTGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: QALWVGLVSLSH*INWLFLPAGSA
Trigger: TGCACTGCCAGCAGGCAAAAATAACCAGTTAATTCAGTGGCTTAAAGAAACCAAACCTACCCACAACGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614771.2