RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145506

Ensembl transcript IDs: ENST00000274150.4, ENST00000296849.10, ENST00000513296.2, ENST00000519933.5, ENST00000523688.1, ENST00000610777.2, ENST00000616539.4, ENST00000625977.1, ENST00000629123.1, ENST00000630368.2

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGGGCTCCCCATGGGCACACAGCCGGCAGCTGCTCTGCTCCCTaGCCTGAGGTCGCGGGCTGTGGTGTGCTGGGAGCGAGGTGTGCT +
Preference number: 1 (lower is better)
Translates to: GWAPHGHTAGSCSAP*PEVAGCGVLGARCA
Trigger: AGCACACCTCGCTCCCAGCACACCACAGCCCGCGACCTCAGGGCAGGGAGCAGAGCAGCTGCCGGCTGTGTGCCCATGGGGAGCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
3UTR CCA 90 bp CGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCT +
Preference number: 1 (lower is better)
Translates to: RAAGSLAPRSPLLLA*AAGPAPPRAPLWQA
Trigger: AGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 90 bp GTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTaGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGC +
Preference number: 1 (lower is better)
Translates to: VLVPLDHWHRVALSC*RGRQVPHHLVLHCG
Trigger: GCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 90 bp GTGGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTaGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCG +
Preference number: 1 (lower is better)
Translates to: VVVLVVVVVLVPLDH*HRVALSCWRGRQVP
Trigger: CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 90 bp GTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTT +
Preference number: 1 (lower is better)
Translates to: VGGRSRTTSCSTVAG*ACGALSGEWPSLPF
Trigger: AAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGT +
Preference number: 1 (lower is better)
Translates to: VVLVPLDHWHRVALS*WRGRQVPHHLVLHC
Trigger: ACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 90 bp CACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTaGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCC +
Preference number: 1 (lower is better)
Translates to: HLVLHCGRLSVWGLE*RVALPALLAVPLVA
Trigger: GGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 90 bp CAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTA +
Preference number: 1 (lower is better)
Translates to: QVPHHLVLHCGRLSV*GLEWRVALPALLAV
Trigger: TACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 90 bp GCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTaGGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGT +
Preference number: 1 (lower is better)
Translates to: APPRAPLWQAERVGP*VASGPPCPFGGTAC
Trigger: ACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 90 bp TCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCGGGCC +
Preference number: 1 (lower is better)
Translates to: SEAGTTCSTSTCDLR*CTACVSGSWERDRA
Trigger: GGCCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 90 bp GGCAGCAGGCTCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCG +
Preference number: 1 (lower is better)
Translates to: GSRLRGWHDVFHQHL*PAVVYGMCIWLLGA
Trigger: CGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 90 bp CAGGCTCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACC +
Preference number: 1 (lower is better)
Translates to: QAPRLARRVPPAPVT*GGVRHVYLAPGSGT
Trigger: GGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 90 bp GCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATaGCAGCACCTGCAGTCAGTTGCTGTTTGCTGTCGGAGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: APGPCPRVQGAPPPS*QHLQSVAVCCRRWG
Trigger: CCCCCACCTCCGACAGCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
3UTR GCA 90 bp GGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTaGACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTG +
Preference number: 1 (lower is better)
Translates to: GRRAEGAWALSTCPR*TTSIMPAPAVSCCL
Trigger: CAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
3UTR CCA 90 bp CCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTTATaGGTTACACAGACGAGCCTTAGAGCCAGGAAACATAGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: PCALQGLILESKQVL*VTQTSLRARKHSGF
Trigger: GAAGCCACTATGTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR-3UTR TCA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGAGGTGGTGGCCGTCCTaGGGGGCCTGGGGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGRWWPS*GAWGGR
Trigger: CCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCT...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGLVAVG*RWGLRE
Trigger: CTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAG...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CAA 90 bp CTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTaGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: LSVWGLEWRVALPAL*AVPLVAVGWRWGLR
Trigger: CCGCAGCCCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACTTTCCCGGACTTGCTaGTGGCTGGCACCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPALSRTC*WLAPQA
Trigger: CGCCTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAG...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCGAGTGGCCCTCCCTaGCCTTTTGGCGGTACCGCT +
Preference number: 2 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVASGPP*PFGGTA
Trigger: AGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCAGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTG +
Preference number: 2 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPAGRLSV*GLEWRV
Trigger: CACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCTGCCCTGGGGCTCCTaGTTTGCTTGCACAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LDHWHRVALSCWRGRQVPLPWGS*FACTGG
Trigger: CCCTCCTGTGCAAGCAAAGCAGGAGCCCCAGGGCAG...CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCAGGGGACTTGAGGAACTaGTTCTCCGGCCCCTTCGGC +
Preference number: 2 (lower is better)
Translates to: RSPLLLAWAAGPAPPRAPGDLRN*FSGPFG
Trigger: GCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCC...TGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCAAGGCTTTCCCGGACTTaGTGCTGGCTGGCACCCCAG +
Preference number: 2 (lower is better)
Translates to: RSPLLLAWAAGPAPPRAPRLSRT*CWLAPQ
Trigger: CTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAGCCT...TGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp CGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCAAGCAGGCTCCGAGGCTaGCACGACGTGTTCCACCAG +
Preference number: 2 (lower is better)
Translates to: RSPLLLAWAAGPAPPRAPSRLRG*HDVFHQ
Trigger: CTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCT...TGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCCTTGAGTGGCGAGTaGCCCTCCCTGCCCTTTTGG +
Preference number: 2 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVALSGE*PSLPFW
Trigger: CCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGC...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR TCA 90 bp CTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCCGGCAGGTAGTAGCTaGAGGCTTTCCCGGACTTGC +
Preference number: 2 (lower is better)
Translates to: LDHWHRVALSCWRGRQVPPAGSS*RLSRTC
Trigger: GCAAGTCCGGGAAAGCCTTCAGCTACTACCTGCCGG...CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGGCTCCTGCTTTGCTTaGACAGGAGGGGACCCTGAG +
Preference number: 2 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVGSCFA*TGGDPE
Trigger: CTCAGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCC...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp GTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: VLGSGARTGGSGGGGGGGRVALS*WRGRQV
Trigger: GACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCG...ACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTCTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAG +
Preference number: 2 (lower is better)
Translates to: VLGSGARTGGSGGGGGGGLVAVG*RWGLRE
Trigger: CTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAG...ACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTCCCTCCCTGCCCTTTTaGCGGTACCGCTTGTGGCCG +
Preference number: 2 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRPSLPF*RYRLWP
Trigger: CGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGG...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCA +
Preference number: 2 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGPLLLA*AAGPAP
Trigger: TGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGG...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCGGGCTGGGCTCCCCATaGGCACACAGCCGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCGLGSP*AHSRQL
Trigger: CAGCTGCCGGCTGTGTGCCCATGGGGAGCCCAGCCC...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
3UTR-3UTR TCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTAGCCCTTGGGGGACTTaGGGAACTGCTTCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRSPWGT*GTASPA
Trigger: GGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCT...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR TCA 90 bp GGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTTCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: GGARGGGGARAAGSLAPRSTVAG*ACGALS
Trigger: ACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGA...ACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTCTGGGGCTCCTGCTTTaGTTGCACAGGAGGGGACCC +
Preference number: 2 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRLGLLL*LHRRGP
Trigger: GGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAG...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTGCGAGTGGCCCTCCCTaGCCTTTTGGCGGTACCGCT +
Preference number: 2 (lower is better)
Translates to: GSGARTGGSGGGGGGGGAASGPP*PFGGTA
Trigger: AGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTGCGAGGCCCTGCCCTaGGGCTCCTGCTTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: GSGARTGGSGGGGGGGGACEALP*GSCFAC
Trigger: GCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCA...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR TCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCACAGGAGGGGACCCTaGGGCCAGTCTGTTAGCCAA +
Preference number: 2 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWHRRGP*GQSVSQ
Trigger: TTGGCTAACAGACTGGCCTCAGGGTCCCCTCCTGTG...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR TCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGC +
Preference number: 2 (lower is better)
Translates to: GSGARTGGSGGGGGGGGAFHQHL*PAVVYG
Trigger: GCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAA...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTTGTGTATCTGGCTCCTaGGAGCGGGACCGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: VLGSGARTGGSGGGGGGGCVSGS*ERDRAW
Trigger: CCAGGCCCGGTCCCGCTCCCAGGAGCCAGATACACA...ACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTCCCTCCCTGCCCTTTTaGCGGTACCGCTTGTGGCCG +
Preference number: 2 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGPSLPF*RYRLWP
Trigger: CGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGG...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTGCCTTGAGTGGCGAGTaGCCCTCCCTGCCCTTTTGG +
Preference number: 2 (lower is better)
Translates to: GSGARTGGSGGGGGGGGAALSGE*PSLPFW
Trigger: CCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGC...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTG +
Preference number: 2 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGGRLSV*GLEWRV
Trigger: CACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp TGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGGGGACTTGAGGAACTaGTTCTCCGGCCCCTTCGGC +
Preference number: 2 (lower is better)
Translates to: CLAVALGRVEVVVVVVVVGDLRN*FSGPFG
Trigger: GCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCC...CACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCGGCTCCTGCTTTGCTTaGACAGGAGGGGACCCTGAG +
Preference number: 2 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLGSCFA*TGGDPE
Trigger: CTCAGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCC...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp TGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGCCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTG +
Preference number: 2 (lower is better)
Translates to: CLAVALGRVEVVVVVVVVPAPVT*GGVRHV
Trigger: CACATGCCGTACACCACCGCAGGTCACAGGTGCTGG...CACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp CATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGAAGCCCATCCGGGCACTCCTTaGGCACTCCAGGGCCTCATT +
Preference number: 2 (lower is better)
Translates to: HSLPASHWDSLQQSPLEAHPGTP*ALQGLI
Trigger: AATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATG...GGCTTCAAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR-3UTR CCA 90 bp CGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTTGCGAGGCCCTGCCCTaGGGCTCCTGCTTTGCTTGC +
Preference number: 2 (lower is better)
Translates to: RVPPAPVTCGGVRHVYLACEALP*GSCFAC
Trigger: GCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCA...AGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTCGGGCTGTGGTGTGCTaGGAGCGAGGTGTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVRAVVC*ERGVLG
Trigger: GCCAAGCACACCTCGCTCCCAGCACACCACAGCCCG...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
3UTR-3UTR TCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCCACAGGAGGGGACCCTaGGGCCAGTCTGTTAGCCAA +
Preference number: 2 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCHRRGP*GQSVSQ
Trigger: TTGGCTAACAGACTGGCCTCAGGGTCCCCTCCTGTG...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR TCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAACAGCAGTCACCCCTTaGAGCCCCGGGAGGAACACC +
Preference number: 2 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPTAVTP*SPGRNT
Trigger: GGTGTTCCTCCCGGGGCTTCAAGGGGTGACTGCTGT...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR-3UTR CCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCT +
Preference number: 2 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVTCDLR*CTACVS
Trigger: AGATACACATGCCGTACACCACCGCAGGTCACAGGT...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACCTGGGGCTCCTGCTTTaGTTGCACAGGAGGGGACCC +
Preference number: 2 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNLGLLL*LHRRGP
Trigger: GGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAG...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 72 bp GTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTG +
Preference number: 3 (lower is better)
Translates to: VPLDHWHRVALS*WRGRQVPHHLV
Trigger: CACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp CCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAGGTGGTGGCCGTCCTG +
Preference number: 3 (lower is better)
Translates to: PALLAVPLVAVG*RWGLREVVAVL
Trigger: CAGGACGGCCACCACCTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp CCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTaGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTC +
Preference number: 3 (lower is better)
Translates to: PLDHWHRVALSC*RGRQVPHHLVL
Trigger: GAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 72 bp GGGCCTGGGGCGGCAGGACGGCCGGCAGGTAGTAGCTaGAGGCTTTCCCGGACTTGCTGCTGGCTGGCACCC +
Preference number: 3 (lower is better)
Translates to: GPGAAGRPAGSS*RLSRTCCWLAP
Trigger: GGGTGCCAGCCAGCAGCAAGTCCGGGAAAGCCTTCAGCTACTACCTGCCGGCCGTCCTGCCGCCCCAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTG +
Preference number: 3 (lower is better)
Translates to: GSLAPRSPLLLA*AAGPAPPRAPL
Trigger: CAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CAA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGGAGCCCTTGGGGGACTaGAGGAACTGCTTCTCCGGC +
Preference number: 3 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGEPLGD*RNCFSG
Trigger: GCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTC...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 72 bp AGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: RSRTTSCSTVAG*ACGALSGEWPS
Trigger: GGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp GACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTaGGAGCGGGACCGGGCCTGGAGGTGCGAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: DLRWCTACVSGS*ERDRAWRCEAL
Trigger: CAGGGCCTCGCACCTCCAGGCCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp CTGCTCCCTGCCCTGAGGTCGCGGGCTGTGGTGTGCTaGGAGCGAGGTGTGCTTGGCAGTGGCGCTAGGACG +
Preference number: 3 (lower is better)
Translates to: LLPALRSRAVVC*ERGVLGSGART
Trigger: CGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCCAGCACACCACAGCCCGCGACCTCAGGGCAGGGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CAA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGGCTTCCCGGAGCCCTaGGGGGACTTGAGGAACTGC +
Preference number: 3 (lower is better)
Translates to: GRLSVWGLEWRVALPALLGFPEP*GDLRNC
Trigger: GCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAAGCC...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 72 bp CGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTaGGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGT +
Preference number: 3 (lower is better)
Translates to: RAPLWQAERVGP*VASGPPCPFGG
Trigger: ACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp CACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: HHLVLHCGRLSV*GLEWRVALPAL
Trigger: AAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp TGGTGGTGGTGGTGGTGGTGGTGGTGCTCGTGGTGGTaGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCG +
Preference number: 3 (lower is better)
Translates to: WWWWWWWWCSWW*WCSCRWITGTA
Trigger: CGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACCACCACCACCACCACCACCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CAA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGCATCCGGGCACTCCTaGCGCACTCCAGGGCCTCAT +
Preference number: 3 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLASGHS*RTPGPH
Trigger: ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR CCA 72 bp AAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCGTGGTaGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACC +
Preference number: 3 (lower is better)
Translates to: KWWWWWWWWCSW*WWCSCRWITGT
Trigger: GGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACCACCACCACCACCACCACCACTT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR CCA 72 bp TGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCGTaGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGC +
Preference number: 3 (lower is better)
Translates to: WKWWWWWWWWCS*WWWCSCRWITG
Trigger: GCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACCACCACCACCACCACCACCACTTCCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CAA 90 bp GTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGAGCCCTTGGGGGACTaGAGGAACTGCTTCTCCGGC +
Preference number: 3 (lower is better)
Translates to: VLGSGARTGGSGGGGGGGEPLGD*RNCFSG
Trigger: GCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTC...ACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 72 bp GCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTaGACCACCTCCATCATGCCAGCACCTGCAGTCAGT +
Preference number: 3 (lower is better)
Translates to: AEGAWALSTCPR*TTSIMPAPAVS
Trigger: ACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
3UTR CCA 72 bp GGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGG +
Preference number: 3 (lower is better)
Translates to: GTTCSTSTCDLR*CTACVSGSWER
Trigger: CCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR-3UTR CAA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGGGAGCGAGGTGTGCTaGGCAGTGGCGCTAGGACGG +
Preference number: 3 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVGSEVC*AVALGR
Trigger: CCGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR TCA 72 bp CTCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGCATGTGTATCTGGCTC +
Preference number: 3 (lower is better)
Translates to: LRGWHDVFHQHL*PAVVYGMCIWL
Trigger: GAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 72 bp AGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTGTATCTGGCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: RLARRVPPAPVT*GGVRHVYLAPG
Trigger: CCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
3UTR GCA 72 bp GGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTaGGCACTCCAGGGCCTCATTTTGGAATCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: GRNTHPKHPGTP*ALQGLILESKQ
Trigger: CTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp GTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACAGGTGGTGGCCGTCCTaGGGGGCCTGGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VALSCWRGRQVPHHLVLHRWWPS*GAWGGR
Trigger: CCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCT...GTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CGGGAGGTGGTGGCCGTCCTGAGGGGCCTGGGGCGGCAGGACGGCCGGCAGGTATCAATGTTGAGGCGCTaGCCGCCCGGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: REVVAVLRGLGRQDGRQVSMLRR*PPGPRG
Trigger: CCCGCGAGGACCGGGCGGGCAGCGCCTCAACATTGA...TACCTGCCGGCCGTCCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCAGGCTCTCTCTCCGCTTaGGGGCGGCGGCGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPAGSLSA*GRRRRA
Trigger: AGCACGCCGCCGCCGCCCGCAAGCGGAGAGAGAGCC...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CGGGAGGTGGTGGCCGTCCTGAGGGGCCTGGGGCGGCAGGACGGCCGGCAGGTATGTGTATCTGGCTCCTaGGAGCGGGACCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: REVVAVLRGLGRQDGRQVCVSGS*ERDRAW
Trigger: CCAGGCCCGGTCCCGCTCCCAGGAGCCAGATACACA...TACCTGCCGGCCGTCCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCTCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCCGTAGGGTGGCGGTaGGGGCTGCGGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVAVGWR*GLREVV
Trigger: CACCACCTCCCGCAGCCCCCACCGCCACCCTACGGC...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGCTTCCTCCGCGCCTTTaGGGCCGCTCGCGTACGCGG +
Preference number: 4 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVLPPRL*GRSRTR
Trigger: CCGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAG...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CGGGAGGTGGTGGCCGTCCTGAGGGGCCTGGGGCGGCAGGACGGCCGGCAGGTAACCTGTAGGGGACACTaGTCCTCCCGGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: REVVAVLRGLGRQDGRQVTCRGH*SSRKGP
Trigger: GGGGCCTTTCCGGGAGGACCAGTGTCCCCTACAGGT...TACCTGCCGGCCGTCCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPALVAVG*RWGLRE
Trigger: CTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAG...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGCTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVLVAVG*RWGLRE
Trigger: CTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAG...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: VALSCWRGRQVPHHLVLHPLLLA*AAGPAP
Trigger: TGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGG...GTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGGTAGCCCTCTCCTGCTaGCGTGGGCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LDHWHRVALSCWRGRQVPVALSC*RGRQVP
Trigger: CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC...CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGGTAGCCCTCTCCTGCTaGCGTGGGCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGVALSC*RGRQVP
Trigger: CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCTGGCCACTGTGGGTaGCCTGCCTGGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPAPGHCG*PAWLHS
Trigger: GCTGTGGAGCCAGGCAGGTCACCCACAGTGGCCAGG...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGTCAATGTTGAGGCGCTaGCCGCCCGGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGSMLRR*PPGPRG
Trigger: CCCGCGAGGACCGGGCGGGCAGCGCCTCAACATTGA...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCGCTCAGGTGCAGGGCTaGGTTCTGAAGCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGAQVQG*VLKPGP
Trigger: CGGCCCCGGCTTCAGAACTCAGCCCTGCACCTGAGC...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCGGAGTGCGTCAATGTTaGGGCGCTGCCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGGVRQC*GAARPV
Trigger: GACCGGGCGGGCAGCGCCTCAACATTGACGCACTCC...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTAGGTGGTGGCCGTCCTaGGGGGCCTGGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLRWWPS*GAWGGR
Trigger: CCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCT...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCTCAATGTTGAGGCGCTaGCCGCCCGGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGSMLRR*PPGPRG
Trigger: CCCGCGAGGACCGGGCGGGCAGCGCCTCAACATTGA...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TTCCCGGAGCCCTTGGGGGACTTGAGGAACTGCTTCTCCGGCCCCTTCGGCCGGCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FPEPLGDLRNCFSGPFGRRVALS*WRGRQV
Trigger: GACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCG...CCGGCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALRVALS*WRGRQV
Trigger: GACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCG...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTGTGGGCTCCCGGTCCTaGCCAGCAGGAGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: GGARGGGGARAAGSLAPRVGSRS*PAGGPS
Trigger: GGAGGGTCCTCCTGCTGGCCAGGACCGGGAGCCCAC...ACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: GRLSVWGLEWRVALPALLPLLLA*AAGPAP
Trigger: TGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGG...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCAGTGCCGCTGGATCACTaGCACCGCGTAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPAVPLDH*HRVALS
Trigger: GGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCAC...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGGTGCCGCTGGATCACTaGCACCGCGTAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGVPLDH*HRVALS
Trigger: GGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCAC...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTCCGTCATCTGCGCTaGGGAGTTGTCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RSPLLLAWAAGPAPPRAPLRHLR*GVVPGA
Trigger: AGCACCCGGGACAACTCCTCAGCGCAGATGACGGAG...TGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGAGCCCTTGGGGGACTTaGGGAACTGCTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGSPWGT*GTASPA
Trigger: GGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCT...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACGGGGACTTGAGGAACTaGTTCTCCGGCCCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VALSCWRGRQVPHHLVLHGDLRN*FSGPFG
Trigger: GCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCC...GTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTTTCCCGGACTTGCTaGTGGCTGGCACCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGLSRTC*WLAPQA
Trigger: CGCCTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAG...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGGGGTCCCCATTaGGCAGCTCCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGPWGPH*AAPACP
Trigger: GGGACAAGCAGGAGCTGCCCAATGGGGACCCCAAGG...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCATCCTGCAACGGGTaGGCTCCCGGTCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWPSCNG*APGPGQ
Trigger: CTGGCCAGGACCGGGAGCCCACCCGTTGCAGGATGG...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCAGCAGGCTCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGCGCTCCGAGCAGGGCTaGGGGTCAGTACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AAGSEAGTTCSTSTCDLRRSEQG*GSVLGL
Trigger: GAGGCCCAGTACTGACCCCCAGCCCTGCTCGGAGCG...CCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGAGCAGGCTCCGAGGCTaGCACGACGTGTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGSRLRG*HDVFHQ
Trigger: CTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCT...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATGCCGTAGGGTGGCGGTaGGGGCTGCGGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEHPPQASGHSLRTPGPHAVGWR*GLREVV
Trigger: CACCACCTCCCGCAGCCCCCACCGCCACCCTACGGC...ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR CAA 72 bp TGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTaGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WGLEWRVALPAL*AVPLVAVGWRW
Trigger: CCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGTGGAGGGCTCAGGGCTaGCGGTTAGCTTCACACGGA +
Preference number: 4 (lower is better)
Translates to: LDHWHRVALSCWRGRQVPWRAQG*RLASHG
Trigger: TCCGTGTGAAGCTAACCGTCAGCCCTGAGCCCTCCA...CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCAAGGTGGTGGCCGTCCTaGGGGGCCTGGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSRWWPS*GAWGGR
Trigger: CCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCT...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGAGCGTGTGGGGCCTTaGGTGGCGAGTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLERVGP*VASGPP
Trigger: GGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp GCCCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGACAGCAGTCACCCCTTaGAGCCCCGGGAGGAACACC +
Preference number: 4 (lower is better)
Translates to: APGGTPTPSIRALLAHSRTAVTP*SPGRNT
Trigger: GGTGTTCCTCCCGGGGCTTCAAGGGGTGACTGCTGT...CCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCGCGGCGTGCTTCGACTaGAGTTTCCCCATCGCCGCC +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALAACFD*SFPIAA
Trigger: GGCGGCGATGGGGAAACTGCAGTCGAAGCACGCCGC...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TTCCCGGAGCCCTTGGGGGACTTGAGGAACTGCTTCTCCGGCCCCTTCGGCCGGGCGGCGTGCTTCGACTaGAGTTTCCCCATCGCCGCC +
Preference number: 4 (lower is better)
Translates to: FPEPLGDLRNCFSGPFGRAACFD*SFPIAA
Trigger: GGCGGCGATGGGGAAACTGCAGTCGAAGCACGCCGC...CCGGCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCTTCCTCCGCGCCTTTaGGGCCGCTCGCGTACGCGG +
Preference number: 4 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLLPPRL*GRSRTR
Trigger: CCGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAG...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGAAGCCCTTCCTCCGCGCCTTTaGGGCCGCTCGCGTACGCGG +
Preference number: 4 (lower is better)
Translates to: HSLPASHWDSLQQSPLEALPPRL*GRSRTR
Trigger: CCGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAG...GGCTTCAAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGCGGGCCCTCGCGGTTTaGTGCCCTCTCTCCGTCATC +
Preference number: 4 (lower is better)
Translates to: GRLSVWGLEWRVALPALLRALAV*CPLSVI
Trigger: GATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCG...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGTCACACGGAGGGTCTTaGTGCTGCCCGAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGSHGGS*CCPRSG
Trigger: ACCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGA...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGTGGTGGTGGTGCTCGTaGCGCTGGATCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: ASGPPCPFGGTACGRRVAWWWCS*RWITGT
Trigger: GGTGCCAGTGATCCAGCGGCACGAGCACCACCACCA...CGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCCCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGACCTGTAGGGGACACTaGTCCTCCCGGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: APGGTPTPSIRALLAHSRTCRGH*SSRKGP
Trigger: GGGGCCTTTCCGGGAGGACCAGTGTCCCCTACAGGT...CCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCACCTGTAGGGGACACTaGTCCTCCCGGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGTCRGH*SSRKGP
Trigger: GGGGCCTTTCCGGGAGGACCAGTGTCCCCTACAGGT...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGCTGCTGCCCGAGGAGTaGTTGACCGAGGCATCCACG +
Preference number: 4 (lower is better)
Translates to: ASGPPCPFGGTACGRRVALLPEE*LTEAST
Trigger: CGTGGATGCCTCGGTCAACCACTCCTCGGGCAGCAG...CGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCGTGGGCTCCCGGTCCTaGCCAGCAGGAGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLVGSRS*PAGGPS
Trigger: GGAGGGTCCTCCTGCTGGCCAGGACCGGGAGCCCAC...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCTGCGAGGCCCTGCCCTaGGGCTCCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALCEALP*GSCFAC
Trigger: GCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCA...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTTGTGTATCTGGCTCCTaGGAGCGGGACCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRCVSGS*ERDRAW
Trigger: CCAGGCCCGGTCCCGCTCCCAGGAGCCAGATACACA...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCCCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGAGCAGGCTCCGAGGCTaGCACGACGTGTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: APGGTPTPSIRALLAHSRSRLRG*HDVFHQ
Trigger: CTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCT...CCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPLVAVG*RWGLRE
Trigger: CTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAG...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATCTTGTGGCCGTAGGGTaGCGGTGGGGGCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: EEHPPQASGHSLRTPGPHLVAVG*RWGLRE
Trigger: CTCCCGCAGCCCCCACCGCCACCCTACGGCCACAAG...ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp TTCCCGGAGCCCTTGGGGGACTTGAGGAACTGCTTCTCCGGCCCCTTCGGCCGGCCCTCCCTGCCCTTTTaGCGGTACCGCTTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FPEPLGDLRNCFSGPFGRPSLPF*RYRLWP
Trigger: CGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGG...CCGGCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLPLLLA*AAGPAP
Trigger: TGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGG...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTCGGGCTGTGGTGTGCTaGGAGCGAGGTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGARGGGGARAAGSLAPRRAVVC*ERGVLG
Trigger: GCCAAGCACACCTCGCTCCCAGCACACCACAGCCCG...ACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAGGGCTGGGCTCCCCATaGGCACACAGCCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPGLGSP*AHSRQL
Trigger: CAGCTGCCGGCTGTGTGCCCATGGGGAGCCCAGCCC...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGAAGCCGGAGGTGAGGGAAGATaGCTCCACGCCGCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HSLPASHWDSLQQSPLEAGGEGR*LHAARG
Trigger: CCCCCGCGCGGCGTGGAGCCATCTTCCCTCACCTCC...GGCTTCAAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAGGAGGTGAGGGAAGATaGCTCCACGCCGCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPGGEGR*LHAARG
Trigger: CCCCCGCGCGGCGTGGAGCCATCTTCCCTCACCTCC...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCCCGGCCTCGCACTaGGACAGCCTACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGLPASH*DSLQQS
Trigger: TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAG...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR CAA 72 bp GGTCGCGGGCTGTGGTGTGCTGGGAGCGAGGTGTGCTaGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGLWCAGSEVC*AVALGRVEVVV
Trigger: CACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCCAGCACACCACAGCCCGCGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAGCTCAGGTGCAGGGCTaGGTTCTGAAGCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPAQVQG*VLKPGP
Trigger: CGGCCCCGGCTTCAGAACTCAGCCCTGCACCTGAGC...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGGAGTGCGTCAATGTTaGGGCGCTGCCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLGVRQC*GAARPV
Trigger: GACCGGGCGGGCAGCGCCTCAACATTGACGCACTCC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp GGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTTGCCCGAGGAGTGGTTaGCCGAGGCATCCACGACCT +
Preference number: 4 (lower is better)
Translates to: GGARGGGGARAAGSLAPRCPRSG*PRHPRP
Trigger: AGGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCA...ACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp GCCCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGCCGGCAGGTAGTAGCTaGAGGCTTTCCCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: APGGTPTPSIRALLAHSRPAGSS*RLSRTC
Trigger: GCAAGTCCGGGAAAGCCTTCAGCTACTACCTGCCGG...CCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp TTCCCGGAGCCCTTGGGGGACTTGAGGAACTGCTTCTCCGGCCCCTTCGGCCGGTCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FPEPLGDLRNCFSGPFGRSTVAG*ACGALS
Trigger: ACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGA...CCGGCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp TCTGCTGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCGGTGCCGGTAGGAGGTaGGGGAAGATGGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: SAAWPPAGSRGCSLLSTSGAGRR*GKMAPR
Trigger: GCGTGGAGCCATCTTCCCTCACCTCCTACCGGCACC...GCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTGTTCACCCTCCATCCTaGAACGGGTGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GGARGGGGARAAGSLAPRVHPPS*NGWAPG
Trigger: ACCGGGAGCCCACCCGTTGCAGGATGGAGGGTGAAC...ACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGCTGCCCTGGGGCTCCTaGTTTGCTTGCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRLSVWGLEWRVALPALLLPWGS*FACTGG
Trigger: CCCTCCTGTGCAAGCAAAGCAGGAGCCCCAGGGCAG...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGPAPVT*GGVRHV
Trigger: CACATGCCGTACACCACCGCAGGTCACAGGTGCTGG...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCGGGGACTTGAGGAACTaGTTCTCCGGCCCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALGDLRN*FSGPFG
Trigger: GCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCC...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGCGAGTGGCCCTCCCTaGCCTTTTGGCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: VWGLEWRVALPALLAVPLASGPP*PFGGTA
Trigger: AGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC...AAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCTCGTGGTGGTGGTGGTaGTCGTGCCGCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGSWWWW*SCRWIT
Trigger: AGTGATCCAGCGGCACGAGCACCACCACCACCACGA...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTTCGCGGGCTGTGGTGTaGTGGGAGCGAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRSRAVV*WERGVL
Trigger: AAGCACACCTCGCTCCCAGCACACCACAGCCCGCGA...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CGGGAGGTGGTGGCCGTCCTGAGGGGCCTGGGGCGGCAGGACGGCCGGCAGGTACATCATGCCAGCACCTaGAGTCAGTTGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: REVVAVLRGLGRQDGRQVHHAST*SQLLFA
Trigger: AGCAAACAGCAACTGACTGCAGGTGCTGGCATGATG...TACCTGCCGGCCGTCCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCATGCTGCTTGGCCTCCTaGGGGGAGCCGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPCCLAS*GEPRML
Trigger: GAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCA...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATCGCTCCGAGCAGGGCTaGGGGTCAGTACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EEHPPQASGHSLRTPGPHRSEQG*GSVLGL
Trigger: GAGGCCCAGTACTGACCCCCAGCCCTGCTCGGAGCG...ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VWGLEWRVALPALLAVPLGRLSV*GLEWRV
Trigger: CACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC...AAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTAGAGCAGAGGGCGCCTaGGCCTTGTCCACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRRAEGA*ALSTCP
Trigger: TGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCT...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CCTTCTGCTGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACACTCCGTCATCTGCGCTaGGGAGTTGTCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSAAWPPAGSRGCSLLSTLRHLR*GVVPGA
Trigger: AGCACCCGGGACAACTCCTCAGCGCAGATGACGGAG...TGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTGCCCGAGGAGTGGTTaGCCGAGGCATCCACGACCT +
Preference number: 4 (lower is better)
Translates to: GSGARTGGSGGGGGGGGACPRSG*PRHPRP
Trigger: AGGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCA...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGCACAGGAGGGGACCCTaGGGCCAGTCTGTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: GRLSVWGLEWRVALPALLHRRGP*GQSVSQ
Trigger: TTGGCTAACAGACTGGCCTCAGGGTCCCCTCCTGTG...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGGCAGGTAGTAGCTaGAGGCTTTCCCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWPAGSS*RLSRTC
Trigger: GCAAGTCCGGGAAAGCCTTCAGCTACTACCTGCCGG...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTAGGTGGTGGCCGTCCTaGGGGGCCTGGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVRWWPS*GAWGGR
Trigger: CCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCT...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCCTTCCTCCGCGCCTTTaGGGCCGCTCGCGTACGCGG +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVLPPRL*GRSRTR
Trigger: CCGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAG...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCGGGAGGAGTTGTCCCGGGTaGTCGCGGCCCTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VTCGGVRHVYLAPGSGTGRSCPG*SRPSAF
Trigger: GAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCT...CCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TCTGCTGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCGCCCTCGCGGTTTGCTaGCCTCTCTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SAAWPPAGSRGCSLLSTSALAVC*PLSVIC
Trigger: GCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGC...GCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTCGGGCCCTCGCGGTTTaGTGCCCTCTCTCCGTCATC +
Preference number: 4 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGRALAV*CPLSVI
Trigger: GATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCG...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACGGGCCCTCGCGGTTTaGTGCCCTCTCTCCGTCATC +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPRALAV*CPLSVI
Trigger: GATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCG...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCTCACACGGAGGGTCTTaGTGCTGCCCGAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALSHGGS*CCPRSG
Trigger: ACCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGA...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGCACCCTTGGCTCCTCTaGCAGTTCACCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: ASGPPCPFGGTACGRRVAHPWLL*QFTLHP
Trigger: AGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTG...CGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGGGGCCTCCTGACGTGTaGAGACAACCTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWGPPDV*RQPPVS
Trigger: GCTGACAGGAGGTTGTCTGCACACGTCAGGAGGCCC...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGTCTGTTAGCCAAGTCTaGAGTCAGACGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGSVSQV*SQTATS
Trigger: GCTGGTGGCCGTCTGACTGCAGACTTGGCTAACAGA...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCGGCTCCTGCTTTGCTTaGACAGGAGGGGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALGSCFA*TGGDPE
Trigger: CTCAGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCC...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGCCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GRLSVWGLEWRVALPALLPAPVT*GGVRHV
Trigger: CACATGCCGTACACCACCGCAGGTCACAGGTGCTGG...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTCTTTCCCGGACTTGCTaGTGGCTGGCACCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: VLGSGARTGGSGGGGGGGLSRTC*WLAPQA
Trigger: CGCCTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAG...ACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TCTGCTGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGGTGGTGGTGCTCGTaGCGCTGGATCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: SAAWPPAGSRGCSLLSTSWWWCS*RWITGT
Trigger: GGTGCCAGTGATCCAGCGGCACGAGCACCACCACCA...GCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGTCGTGGTGGTGGTGGTaGTCGTGCCGCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWSWWWW*SCRWIT
Trigger: AGTGATCCAGCGGCACGAGCACCACCACCACCACGA...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GAGGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGAGCTGCTCTGCTCCCTaGCCTGAGGTCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EVCLAVALGRVEVVVVVVSCSAP*PEVAGC
Trigger: ACAGCCCGCGACCTCAGGGCAGGGAGCAGAGCAGCT...CACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATGCGGGGAGCCGCGGATaGTCCCTGCTAAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: EEHPPQASGHSLRTPGPHAGSRG*SLLSTS
Trigger: GCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGC...ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GAGGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGTGCGAGGCCCTGCCCTaGGGCTCCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: EVCLAVALGRVEVVVVVVCEALP*GSCFAC
Trigger: GCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCA...CACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTTGCGAGGCCCTGCCCTaGGGCTCCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLCEALP*GSCFAC
Trigger: GCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCA...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GCAGCAGGCTCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTACGGCATGTGTATCTaGCTCCTGGGAGCGGGACCG +
Preference number: 4 (lower is better)
Translates to: AAGSEAGTTCSTSTCDLRYGMCI*LLGAGP
Trigger: CGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTA...CCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCCCTCCCTGCCCTTTTaGCGGTACCGCTTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCPSLPF*RYRLWP
Trigger: CGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGG...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCGRLSV*GLEWRV
Trigger: CACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTCCTCTCCTGCTGGCGTaGGCGGCAGGTCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLPLLLA*AAGPAP
Trigger: TGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGG...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATGTGCCGCTGGATCACTaGCACCGCGTAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EEHPPQASGHSLRTPGPHVPLDH*HRVALS
Trigger: GGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCAC...ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTCGGGCTGTGGTGTGCTaGGAGCGAGGTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGRAVVC*ERGVLG
Trigger: GCCAAGCACACCTCGCTCCCAGCACACCACAGCCCG...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGGGCTGGGCTCCCCATaGGCACACAGCCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLGLGSP*AHSRQL
Trigger: CAGCTGCCGGCTGTGTGCCCATGGGGAGCCCAGCCC...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCGTGTTCACCGCCATGTaGCATCGAGGGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGVFTAM*HRGQKS
Trigger: GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACAC...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCGCTCAGGTGCAGGGCTaGGTTCTGAAGCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVAQVQG*VLKPGP
Trigger: CGGCCCCGGCTTCAGAACTCAGCCCTGCACCTGAGC...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp GTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCGGGTGGAGGGCTCAGGGCTaGCGGTTAGCTTCACACGGA +
Preference number: 4 (lower is better)
Translates to: VTCGGVRHVYLAPGSGTGWRAQG*RLASHG
Trigger: TCCGTGTGAAGCTAACCGTCAGCCCTGAGCCCTCCA...CCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCAGCCCTTGGGGGACTTaGGGAACTGCTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCSPWGT*GTASPA
Trigger: GGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCT...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp GAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATAGCCCTTGGGGGACTTaGGGAACTGCTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: EEHPPQASGHSLRTPGPHSPWGT*GTASPA
Trigger: GGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCT...ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTTCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLSTVAG*ACGALS
Trigger: ACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGA...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAACAGCAGTCACCCCTTaGAGCCCCGGGAGGAACACC +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPTAVTP*SPGRNT
Trigger: GGTGTTCCTCCCGGGGCTTCAAGGGGTGACTGCTGT...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCAGGAGTTGTCCCGGGTaGTCGCGGCCCTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCRSCPG*SRPSAF
Trigger: GAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCT...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCGGGCCTCTCTCCGTCATCTaGGCTGAGGAGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VTCGGVRHVYLAPGSGTGPLSVI*AEELSR
Trigger: CCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGG...CCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCGCCCTCGCGGTTTGCTaGCCTCTCTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCALAVC*PLSVIC
Trigger: GCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGC...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTTCAATGTTGAGGCGCTaGCCGCCCGGTCCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLSMLRR*PPGPRG
Trigger: CCCGCGAGGACCGGGCGGGCAGCGCCTCAACATTGA...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGAAGCCGTTCACCCTCCATCCTaGAACGGGTGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HSLPASHWDSLQQSPLEAVHPPS*NGWAPG
Trigger: ACCGGGAGCCCACCCGTTGCAGGATGGAGGGTGAAC...GGCTTCAAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCACCCTTGGCTCCTCTaGCAGTTCACCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWHPWLL*QFTLHP
Trigger: AGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTG...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTCCACTGTGGGTGACCTaGCTGGCTCCACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLGSGARTGGSGGGGGGGPLWVT*LAPQLP
Trigger: AGGGAGCTGTGGAGCCAGGCAGGTCACCCACAGTGG...ACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGGCTCCTGCTTTGCTTaGACAGGAGGGGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: VWGLEWRVALPALLAVPLGSCFA*TGGDPE
Trigger: CTCAGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCC...AAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGCTGGGGCTCCTGCTTTaGTTGCACAGGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SEAGTTCSTSTCDLRWCTLGLLL*LHRRGP
Trigger: GGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAG...CGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCTGCCCTGGGGCTCCTaGTTTGCTTGCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCLPWGS*FACTGG
Trigger: CCCTCCTGTGCAAGCAAAGCAGGAGCCCCAGGGCAG...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGAGGCTTTCCCGGACTTaGTGCTGGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: CLAVALGRVEVVVVVVVVRLSRT*CWLAPQ
Trigger: CTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAGCCT...CACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTAGGCTTTCCCGGACTTaGTGCTGGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLRLSRT*CWLAPQ
Trigger: CTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAGCCT...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGCTGGGAGCGAGGTGTaGTTGGCAGTGGCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGAGSEV*LAVALG
Trigger: TCCTAGCGCCACTGCCAAGCACACCTCGCTCCCAGC...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCTGCTGCTTGGCCTCCTaGGGGGAGCCGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVCCLAS*GEPRML
Trigger: GAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCA...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTCTGCTGCCCGAGGAGTaGTTGACCGAGGCATCCACG +
Preference number: 4 (lower is better)
Translates to: GVLGSGARTGGSGGGGGGLLPEE*LTEAST
Trigger: CGTGGATGCCTCGGTCAACCACTCCTCGGGCAGCAG...ACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTCCATCCTGCAACGGGTaGGCTCCCGGTCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLPSCNG*APGPGQ
Trigger: CTGGCCAGGACCGGGAGCCCACCCGTTGCAGGATGG...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCCTGTCAGCCACCCTTaGCTCCTCTGCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: GSGARTGGSGGGGGGGGAPVSHP*LLCQFT
Trigger: GGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGG...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCCGCTCCGAGCAGGGCTaGGGGTCAGTACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVRSEQG*GSVLGL
Trigger: GAGGCCCAGTACTGACCCCCAGCCCTGCTCGGAGCG...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTCGCTCCGAGCAGGGCTaGGGGTCAGTACTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLRSEQG*GSVLGL
Trigger: GAGGCCCAGTACTGACCCCCAGCCCTGCTCGGAGCG...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCAGCAGGCTCCGAGGCTaGCACGACGTGTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLSRLRG*HDVFHQ
Trigger: CTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCT...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGAAGCCGCCTTGAGTGGCGAGTaGCCCTCCCTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HSLPASHWDSLQQSPLEAALSGE*PSLPFW
Trigger: CCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGC...GGCTTCAAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCGTAGCCCTCTCCTGCTaGCGTGGGCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCVALSC*RGRQVP
Trigger: CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTGGGCTGGGCTCCCCATaGGCACACAGCCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVPPAPVTCGGVRHVYLAGLGSP*AHSRQL
Trigger: CAGCTGCCGGCTGTGTGCCCATGGGGAGCCCAGCCC...AGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GAGGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGAGAGCAGAGGGCGCCTaGGCCTTGTCCACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: EVCLAVALGRVEVVVVVVRAEGA*ALSTCP
Trigger: TGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCT...CACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAAGAGCAGAGGGCGCCTaGGCCTTGTCCACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPRAEGA*ALSTCP
Trigger: TGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCT...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACTCCCGGCCTCGCACTaGGACAGCCTACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPLPASH*DSLQQS
Trigger: TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAG...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTCTGCCTTCTGCTGCTTaGCCTCCTGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLLPSAA*PPAGSR
Trigger: GCGGCTCCCCGCAGGAGGCCAAGCAGCAGAAGGCAG...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTCATAGATGGTGTGCATaGGGCTGGACATGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRHRWCA*GWTCPP
Trigger: GGGAGGACATGTCCAGCCTCATGCACACCATCTATG...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCTGGAGGGCTCAGGGCTaGCGGTTAGCTTCACACGGA +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCWRAQG*RLASHG
Trigger: TCCGTGTGAAGCTAACCGTCAGCCCTGAGCCCTCCA...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp ACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCCCTGGCCACTGTGGGTaGCCTGCCTGGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TCSTSTCDLRWCTACVSGPGHCG*PAWLHS
Trigger: GCTGTGGAGCCAGGCAGGTCACCCACAGTGGCCAGG...GCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCACAGGAGGGGACCCTaGGGCCAGTCTGTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCHRRGP*GQSVSQ
Trigger: TTGGCTAACAGACTGGCCTCAGGGTCCCCTCCTGTG...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGCCCTTGGGGGACTTaGGGAACTGCTTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCSPWGT*GTASPA
Trigger: GGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCT...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCCGGCAGGTAGTAGCTaGAGGCTTTCCCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCPAGSS*RLSRTC
Trigger: GCAAGTCCGGGAAAGCCTTCAGCTACTACCTGCCGG...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCGAGCGTGTGGGGCCTTaGGTGGCGAGTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCERVGP*VASGPP
Trigger: GGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTC...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CCCACCGGCCCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCGGCGTGCTTCGACTaGAGTTTCCCCATCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PTGPVPSHFMMHKPGKASAACFD*SFPIAA
Trigger: GGCGGCGATGGGGAAACTGCAGTCGAAGCACGCCGC...TGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGGGCCGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCCTCTCTCCGTCATCTaGGCTGAGGAGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLPLSVI*AEELSR
Trigger: CCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGG...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACGCCCTCGCGGTTTGCTaGCCTCTCTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: TCDLRWCTACVSGSWERDALAVC*PLSVIC
Trigger: GCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGC...GTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCCGGGCCCTCGCGGTTTaGTGCCCTCTCTCCGTCATC +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVRALAV*CPLSVI
Trigger: GATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCG...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGGGCCTCCTGACGTGTaGAGACAACCTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLGPPDV*RQPPVS
Trigger: GCTGACAGGAGGTTGTCTGCACACGTCAGGAGGCCC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCGGGCCTCCTGACGTGTaGAGACAACCTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLGPPDV*RQPPVS
Trigger: GCTGACAGGAGGTTGTCTGCACACGTCAGGAGGCCC...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCAGGTAGTGGTTTCTaGGCTCCGTGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALPGSGF*APCSRP
Trigger: TGGACGAGAACACGGAGCGCAGAAACCACTACCTGG...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCCTGGGGCTCCTGCTTTaGTTGCACAGGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCLGLLL*LHRRGP
Trigger: GGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAG...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGCCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SEAGTTCSTSTCDLRWCTPAPVT*GGVRHV
Trigger: CACATGCCGTACACCACCGCAGGTCACAGGTGCTGG...CGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCGGGGACTTGAGGAACTaGTTCTCCGGCCCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCGDLRN*FSGPFG
Trigger: GCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCC...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCCTTTCCCGGACTTGCTaGTGGCTGGCACCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVLSRTC*WLAPQA
Trigger: CGCCTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAG...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PKHPGTPCALQGLILESKRVALS*WRGRQV
Trigger: GACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCG...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTCGCGTAGCCCTCTCCTaGTGGCGTGGGCGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVRVALS*WRGRQV
Trigger: GACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCG...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACTGGTGGTGGTGCTCGTaGCGCTGGATCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: TCDLRWCTACVSGSWERDWWWCS*RWITGT
Trigger: GGTGCCAGTGATCCAGCGGCACGAGCACCACCACCA...GTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCATCGTGGTGGTGGTGGTaGTCGTGCCGCTGGATCACT +
Preference number: 4 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPSWWWW*SCRWIT
Trigger: AGTGATCCAGCGGCACGAGCACCACCACCACCACGA...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCTCGCGGGCTGTGGTGTaGTGGGAGCGAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCSRAVV*WERGVL
Trigger: AAGCACACCTCGCTCCCAGCACACCACAGCCCGCGA...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCAAGCTGCTCTGCTCCCTaGCCTGAGGTCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSSCSAP*PEVAGC
Trigger: ACAGCCCGCGACCTCAGGGCAGGGAGCAGAGCAGCT...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCTCCACGTGTCCAAGGTaGACCACCTCCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALSTCPR*TTSIMP
Trigger: TGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCAGCAGGCTCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTCCACGTGTCCAAGGTaGACCACCTCCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: AAGSEAGTTCSTSTCDLRSTCPR*TTSIMP
Trigger: TGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA...CCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGAGCCTGCTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp ACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACGGAAAGGCCCCTCCTTaGGGTCCCCATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TCDLRWCTACVSGSWERDGKAPP*GPHWAA
Trigger: AGCTGCCCAATGGGGACCCCAAGGAGGGGCCTTTCC...GTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCCTGCTGCCCGAGGAGTaGTTGACCGAGGCATCCACG +
Preference number: 4 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCLLPEE*LTEAST
Trigger: CGTGGATGCCTCGGTCAACCACTCCTCGGGCAGCAG...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGTGGGCTCCCGGTCCTaGCCAGCAGGAGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVVGSRS*PAGGPS
Trigger: GGAGGGTCCTCCTGCTGGCCAGGACCGGGAGCCCAC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGGCCTTGAGTGGCGAGTaGCCCTCCCTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPAPVTCGGVRHVYLAPGALSGE*PSLPFW
Trigger: CCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGC...CCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGTAGCCCTCTCCTGCTaGCGTGGGCGGCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVVALSC*RGRQVP
Trigger: CGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTAC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCGGGGTGTTCACCGCCATGTaGCATCGAGGGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VTCGGVRHVYLAPGSGTGVFTAM*HRGQKS
Trigger: GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACAC...CCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCGGAGTGCGTCAATGTTaGGGCGCTGCCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCGVRQC*GAARPV
Trigger: GACCGGGCGGGCAGCGCCTCAACATTGACGCACTCC...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTACATGTCCTCCCTGGTaGCCTTCCCGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GSGARTGGSGGGGGGGGATCPPW*PSRSCQ
Trigger: TTGACAACTGCGGGAAGGTCACCAGGGAGGACATGT...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR TCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCATGCCCGAGGAGTGGTTaGCCGAGGCATCCACGACCT +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSCPRSG*PRHPRP
Trigger: AGGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCA...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTTGCCCGAGGAGTGGTTaGCCGAGGCATCCACGACCT +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLCPRSG*PRHPRP
Trigger: AGGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCA...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCAAGGAGTTGTCCCGGGTaGTCGCGGCCCTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSRSCPG*SRPSAF
Trigger: GAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCT...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGCCTCTCTCCGTCATCTaGGCTGAGGAGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PPAPVTCGGVRHVYLAPGPLSVI*AEELSR
Trigger: CCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGG...CCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCCTGGGGCTCCTGCTTTaGTTGCACAGGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVLGLLL*LHRRGP
Trigger: GGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAG...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTAGGCTTTCCCGGACTTaGTGCTGGCTGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLRLSRT*CWLAPQ
Trigger: CTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAGCCT...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCAGGCTCCTGCTTTGCTTaGACAGGAGGGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSGSCFA*TGGDPG
Trigger: CCCTGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCC...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCAACTGCTGCCTTCTGCTaGTTGGCCTCCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSTAAFC*LASCGE
Trigger: CTCCCCGCAGGAGGCCAAGCAGCAGAAGGCAGCAGT...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCACCTGTAGGGGACACTaGTCCTCCCGGAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVTCRGH*SSRKGP
Trigger: GGGGCCTTTCCGGGAGGACCAGTGTCCCCTACAGGT...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGACCGAGACATCGCACTaGAGTGCGTCAATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GALSGEWPSLPFWRYRLWTETSH*SASMLR
Trigger: CCTCAACATTGACGCACTCCAGTGCGATGTCTCGGT...CCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCCTGCTGCCCGAGGAGTaGTTGACCGAGGCATCCACG +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVLLPEE*LTEAST
Trigger: CGTGGATGCCTCGGTCAACCACTCCTCGGGCAGCAG...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCCCTGTCAGCCACCCTTaGCTCCTCTGCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCPVSHP*LLCQFT
Trigger: GGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGG...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GGTGGTGCTCGTGGTGGTGGTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCT +
Preference number: 4 (lower is better)
Translates to: GGARGGGGARAAGSLAPRTCDLR*CTACVS
Trigger: AGATACACATGCCGTACACCACCGCAGGTCACAGGT...ACGCGGTGCCAGTGATCCAGCGGCACGAGCACCACCACCACCACGAGCACCACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAGCCGTAGGGTGGCGGTaGGGGCTGCGGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPAVGWR*GLREVV
Trigger: CACCACCTCCCGCAGCCCCCACCGCCACCCTACGGC...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCGRLSV*GLEWRV
Trigger: CACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGTGTTCACCGCCATGTaGCATCGAGGGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLVFTAM*HRGQKS
Trigger: GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACAC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCATAGATGGTGTGCATaGGGCTGGACATGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCHRWCA*GWTCPP
Trigger: GGGAGGACATGTCCAGCCTCATGCACACCATCTATG...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp CGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTTTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: RVPPAPVTCGGVRHVYLAFHQHL*PAVVYG
Trigger: GCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAA...AGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGGCGGCGTGCTTCGACTaGAGTTTCCCCATCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PKHPGTPCALQGLILESKAACFD*SFPIAA
Trigger: GGCGGCGATGGGGAAACTGCAGTCGAAGCACGCCGC...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTTCACACGGAGGGTCTTaGTGCTGCCCGAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLSHGGS*CCPRSG
Trigger: ACCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGA...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTGTTCACCCTCCATCCTaGAACGGGTGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RVPPAPVTCGGVRHVYLAVHPPS*NGWAPG
Trigger: ACCGGGAGCCCACCCGTTGCAGGATGGAGGGTGAAC...AGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCCTGCCCTGGGGCTCCTaGTTTGCTTGCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCLPWGS*FACTGG
Trigger: CCCTCCTGTGCAAGCAAAGCAGGAGCCCCAGGGCAG...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCGAGTGGCCCTCCCTaGCCTTTTGGCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVASGPP*PFGGTA
Trigger: AGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCGCTGGGAGCGAGGTGTaGTTGGCAGTGGCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCAGSEV*LAVALG
Trigger: TCCTAGCGCCACTGCCAAGCACACCTCGCTCCCAGC...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTAGCTGCTCTGCTCCCTaGCCTGAGGTCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVSCSAP*PEVAGC
Trigger: ACAGCCCGCGACCTCAGGGCAGGGAGCAGAGCAGCT...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GAGGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGCACCTGCAGTCAGTTaGTGTTTGCTGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EVCLAVALGRVEVVVVVVAPAVS*CLLSEV
Trigger: CACCTCCGACAGCAAACAGCAACTGACTGCAGGTGC...CACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCTCCACGTGTCCAAGGTaGACCACCTCCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCSTCPR*TTSIMP
Trigger: TGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCGCGGGGAGCCGCGGATaGTCCCTGCTAAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCAGSRG*SLLSTS
Trigger: GCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGC...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCCCTTGGGGTCCCCATTaGGCAGCTCCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCPWGPH*AAPACP
Trigger: GGGACAAGCAGGAGCTGCCCAATGGGGACCCCAAGG...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTACCGAGACATCGCACTaGAGTGCGTCAATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VWGLEWRVALPALLAVPLTETSH*SASMLR
Trigger: CCTCAACATTGACGCACTCCAGTGCGATGTCTCGGT...AAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAGTGGGCTCCCGGTCCTaGCCAGCAGGAGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPVGSRS*PAGGPS
Trigger: GGAGGGTCCTCCTGCTGGCCAGGACCGGGAGCCCAC...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCTGTCAGCCACCCTTaGCTCCTCTGCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSPVSHP*LLCQFT
Trigger: GGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGG...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTACCCAGGGCCGAATCTaGACGTGTAGTTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: VWGLEWRVALPALLAVPLTQGRI*TCSSQS
Trigger: GGATTGAGAACTACACGTCCAGATTCGGCCCTGGGT...AAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTTGCGAGGCCCTGCCCTaGGGCTCCTGCTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVCEALP*GSCFAC
Trigger: GCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCA...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGTGTGTATCTGGCTCCTaGGAGCGGGACCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PKHPGTPCALQGLILESKCVSGS*ERDRAW
Trigger: CCAGGCCCGGTCCCGCTCCCAGGAGCCAGATACACA...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGCCGTAGGGTGGCGGTaGGGGCTGCGGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAEAVGWR*GLREVV
Trigger: CACCACCTCCCGCAGCCCCCACCGCCACCCTACGGC...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTCCCTCCCTGCCCTTTTaGCGGTACCGCTTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVPSLPF*RYRLWP
Trigger: CGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGG...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGGGCAGGCTGAGCGTGTaGGGCCTTGAGTGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PKHPGTPCALQGLILESKGRLSV*GLEWRV
Trigger: CACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCGTGCCGCTGGATCACTaGCACCGCGTAGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCVPLDH*HRVALS
Trigger: GGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCAC...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCCGGGCTGTGGTGTGCTaGGAGCGAGGTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCRAVVC*ERGVLG
Trigger: GCCAAGCACACCTCGCTCCCAGCACACCACAGCCCG...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGGAGTGCGTCAATGTTaGGGCGCTGCCCGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSGVRQC*GAARPV
Trigger: GACCGGGCGGGCAGCGCCTCAACATTGACGCACTCC...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTTTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVFHQHL*PAVVYG
Trigger: GCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAA...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGTGTGGGGCCTTaGGTGGCGAGTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAEERVGP*VASGPP
Trigger: GGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTC...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGGAGCGTGTGGGGCCTTaGGTGGCGAGTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASERVGP*VASGPP
Trigger: GGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTC...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTTCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVSTVAG*ACGALS
Trigger: ACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGA...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCCCTCGCGGTTTGCTaGCCTCTCTCCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVALAVC*PLSVIC
Trigger: GCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCCTGCCCTGGGGCTCCTaGTTTGCTTGCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCLPWGS*FACTGG
Trigger: CCCTCCTGTGCAAGCAAAGCAGGAGCCCCAGGGCAG...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTTCTGCTGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACACATCATGCCAGCACCTaGAGTCAGTTGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSAAWPPAGSRGCSLLSTHHAST*SQLLFA
Trigger: AGCAAACAGCAACTGACTGCAGGTGCTGGCATGATG...TGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGGCTCCTGCTTTGCTTaGACAGGAGGGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVGSCFA*TGGDPG
Trigger: CCCTGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCACCGAGACATCGCACTaGAGTGCGTCAATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLTETSH*SASMLR
Trigger: CCTCAACATTGACGCACTCCAGTGCGATGTCTCGGT...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCCCATCCTGCAACGGGTaGGCTCCCGGTCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSPSCNG*APGPGQ
Trigger: CTGGCCAGGACCGGGAGCCCACCCGTTGCAGGATGG...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTACGGCATGTGTATCTaGCTCCTGGGAGCGGGACCG +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCYGMCI*LLGAGP
Trigger: CGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTA...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTTACGGCATGTGTATCTaGCTCCTGGGAGCGGGACCG +
Preference number: 4 (lower is better)
Translates to: VPPAPVTCGGVRHVYLAPYGMCI*LLGAGP
Trigger: CGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTA...AGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp TGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCT +
Preference number: 4 (lower is better)
Translates to: CLAVALGRVEVVVVVVVVTCDLR*CTACVS
Trigger: AGATACACATGCCGTACACCACCGCAGGTCACAGGT...CACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCAGAGCAGAGGGCGCCTaGGCCTTGTCCACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCRAEGA*ALSTCP
Trigger: TGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCT...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCGTGTTCACCGCCATGTaGCATCGAGGGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVVFTAM*HRGQKS
Trigger: GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACAC...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGTCAAAGCAGGTTTTATaGGTTACACAGACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AAGPAPPRAPLWQAERVGSKQVL*VTQTSL
Trigger: AAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGA...CCCCACACGCTCAGCCTGCCACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGTCAAAGCAGGTTTTATaGGTTACACAGACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGSKQVL*VTQTSL
Trigger: AAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGA...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCCTGCCTTCTGCTGCTTaGCCTCCTGCGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSLPSAA*PPAGSR
Trigger: GCGGCTCCCCGCAGGAGGCCAAGCAGCAGAAGGCAG...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
3UTR CAA 72 bp CGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTaGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: REEHPPQASGHS*RTPGPHFGIKA
Trigger: TGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACATAGATGGTGTGCATaGGGCTGGACATGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSHRWCA*GWTCPP
Trigger: GGGAGGACATGTCCAGCCTCATGCACACCATCTATG...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGTGGAGGGCTCAGGGCTaGCGGTTAGCTTCACACGGA +
Preference number: 4 (lower is better)
Translates to: PKHPGTPCALQGLILESKWRAQG*RLASHG
Trigger: TCCGTGTGAAGCTAACCGTCAGCCCTGAGCCCTCCA...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTCCGGCAGGTAGTAGCTaGAGGCTTTCCCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVPAGSS*RLSRTC
Trigger: GCAAGTCCGGGAAAGCCTTCAGCTACTACCTGCCGG...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGGTGCCGGTAGGAGGTaGGGGAAGATGGCTCCACGC +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSGAGRR*GKMAPR
Trigger: GCGTGGAGCCATCTTCCCTCACCTCCTACCGGCACC...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCCACCCTTGGCTCCTCTaGCAGTTCACCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCHPWLL*QFTLHP
Trigger: AGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTG...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTCCAGGTAGTGGTTTCTaGGCTCCGTGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLPGSGF*APCSRP
Trigger: TGGACGAGAACACGGAGCGCAGAAACCACTACCTGG...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCCACCGGCCCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCACCAGGTAGTGGTTTCTaGGCTCCGTGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PTGPVPSHFMMHKPGKASPGSGF*APCSRP
Trigger: TGGACGAGAACACGGAGCGCAGAAACCACTACCTGG...TGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGGGCCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCCTTTCCCGGACTTGCTaGTGGCTGGCACCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSLSRTC*WLAPQA
Trigger: CGCCTGGGGTGCCAGCCAGCAGCAAGTCCGGGAAAG...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGCGAGTGGCCCTCCCTaGCCTTTTGGCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSASGPP*PFGGTA
Trigger: AGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCATCATGCCAGCACCTaGAGTCAGTTGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCHHAST*SQLLFA
Trigger: AGCAAACAGCAACTGACTGCAGGTGCTGGCATGATG...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCATCCACGTGTCCAAGGTaGACCACCTCCATCATGCCA +
Preference number: 4 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSSTCPR*TTSIMP
Trigger: TGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCATGTGTATCTGGCTCCTaGGAGCGGGACCGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPCVSGS*ERDRAW
Trigger: CCAGGCCCGGTCCCGCTCCCAGGAGCCAGATACACA...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTCCCTCCCTGCCCTTTTaGCGGTACCGCTTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFPSLPF*RYRLWP
Trigger: CGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGG...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCACATGTCCTCCCTGGTaGCCTTCCCGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCTCPPW*PSRSCQ
Trigger: TTGACAACTGCGGGAAGGTCACCAGGGAGGACATGT...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCTTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSFHQHL*PAVVYG
Trigger: GCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAA...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTCACCCTTGGCTCCTCTaGCAGTTCACCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVHPWLL*QFTLHP
Trigger: AGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTG...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCTGTTAGCCAAGTCTaGAGTCAGACGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TCSTSTCDLRWCTACVSGSVSQV*SQTATS
Trigger: GCTGGTGGCCGTCTGACTGCAGACTTGGCTAACAGA...GCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGCGAGTGGCCCTCCCTaGCCTTTTGGCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAEASGPP*PFGGTA
Trigger: AGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGC...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTTGGTGGTGGTGCTCGTaGCGCTGGATCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFWWWCS*RWITGT
Trigger: GGTGCCAGTGATCCAGCGGCACGAGCACCACCACCA...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGCTGGGAGCGAGGTGTaGTTGGCAGTGGCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSAGSEV*LAVALG
Trigger: TCCTAGCGCCACTGCCAAGCACACCTCGCTCCCAGC...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAGCTGGGAGCGAGGTGTaGTTGGCAGTGGCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPAGSEV*LAVALG
Trigger: TCCTAGCGCCACTGCCAAGCACACCTCGCTCCCAGC...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTTCGCGGGCTGTGGTGTaGTGGGAGCGAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFSRAVV*WERGVL
Trigger: AAGCACACCTCGCTCCCAGCACACCACAGCCCGCGA...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAAGCTGCTCTGCTCCCTaGCCTGAGGTCGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAESCSAP*PEVAGC
Trigger: ACAGCCCGCGACCTCAGGGCAGGGAGCAGAGCAGCT...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTACTGCTGCCTTCTGCTaGTTGGCCTCCTGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFTAAFC*LASCGE
Trigger: CTCCCCGCAGGAGGCCAAGCAGCAGAAGGCAGCAGT...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCACCTTGGGGTCCCCATTaGGCAGCTCCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPPWGPH*AAPACP
Trigger: GGGACAAGCAGGAGCTGCCCAATGGGGACCCCAAGG...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTACCCAGGGCCGAATCTaGACGTGTAGTTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLTQGRI*TCSSQS
Trigger: GGATTGAGAACTACACGTCCAGATTCGGCCCTGGGT...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCACCGGCCCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAACCCAGGGCCGAATCTaGACGTGTAGTTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: PTGPVPSHFMMHKPGKASTQGRI*TCSSQS
Trigger: GGATTGAGAACTACACGTCCAGATTCGGCCCTGGGT...TGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGGGCCGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAACGGGCTGTGGTGTGCTaGGAGCGAGGTGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAERAVVC*ERGVLG
Trigger: GCCAAGCACACCTCGCTCCCAGCACACCACAGCCCG...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAATTCCACCAGCACCTGTaGCCTGCGGTGGTGTACGGC +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAEFHQHL*PAVVYG
Trigger: GCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAA...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAATCCACTGTGGCAGGCTaGGCGTGTGGGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAESTVAG*ACGALS
Trigger: ACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGA...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTTCACACGGAGGGTCTTaGTGCTGCCCGAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFSHGGS*CCPRSG
Trigger: ACCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGA...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGGTTCACCCTCCATCCTaGAACGGGTGGGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASVHPPS*NGWAPG
Trigger: ACCGGGAGCCCACCCGTTGCAGGATGGAGGGTGAAC...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTGGGCCTCCTGACGTGTaGAGACAACCTCCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFGPPDV*RQPPVS
Trigger: GCTGACAGGAGGTTGTCTGCACACGTCAGGAGGCCC...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGCTGGGGCTCCTGCTTTaGTTGCACAGGAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASLGLLL*LHRRGP
Trigger: GGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAG...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAACCTTGGGGTCCCCATTaGGCAGCTCCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RKHSGFRCVHRHVASRAEPWGPH*AAPACP
Trigger: GGGACAAGCAGGAGCTGCCCAATGGGGACCCCAAGG...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCACCCAGGGCCGAATCTaGACGTGTAGTTCTCAATCC +
Preference number: 4 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCTQGRI*TCSSQS
Trigger: GGATTGAGAACTACACGTCCAGATTCGGCCCTGGGT...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGGCCTTGAGTGGCGAGTaGCCCTCCCTGCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASALSGE*PSLPFW
Trigger: CCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGC...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGTCCCCTCTCACTTCATaGTGCACAAGCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PKHPGTPCALQGLILESKSPLTS*CTSQAK
Trigger: CTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGA...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGCCTCTCTCCGTCATCTaGGCTGAGGAGTTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASPLSVI*AEELSR
Trigger: CCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGG...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGCATCCGGGCACTCCTTaGGCACTCCAGGGCCTCATT +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASHPGTP*ALQGLI
Trigger: AATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATG...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACCCATCCTGCAACGGGTaGGCTCCCGGTCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNPSCNG*APGPGQ
Trigger: CTGGCCAGGACCGGGAGCCCACCCGTTGCAGGATGG...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCT +
Preference number: 4 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCTCDLR*CTACVS
Trigger: AGATACACATGCCGTACACCACCGCAGGTCACAGGT...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTTCAAAGCAGGTTTTATaGGTTACACAGACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLSKQVL*VTQTSL
Trigger: AAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGA...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR TCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTACATGTCCTCCCTGGTaGCCTTCCCGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFTCPPW*PSRSCQ
Trigger: TTGACAACTGCGGGAAGGTCACCAGGGAGGACATGT...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAGCACCTGCAGTCAGTTaGTGTTTGCTGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPAPAVS*CLLSEV
Trigger: CACCTCCGACAGCAAACAGCAACTGACTGCAGGTGC...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTCATCATGCCAGCACCTaGAGTCAGTTGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVHHAST*SQLLFA
Trigger: AGCAAACAGCAACTGACTGCAGGTGCTGGCATGATG...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp CTTAGAGCCAGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGCATAGATGGTGTGCATaGGGCTGGACATGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRARKHSGFRCVHRHVASHRWCA*GWTCPP
Trigger: GGGAGGACATGTCCAGCCTCATGCACACCATCTATG...CGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCTGGCTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCTCCCCTCTCACTTCATaGTGCACAAGCCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSSPLTS*CTSQAK
Trigger: CTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGA...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACCCACTGTGGGTGACCTaGCTGGCTCCACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNPLWVT*LAPQLP
Trigger: AGGGAGCTGTGGAGCCAGGCAGGTCACCCACAGTGG...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACGGGGACTTGAGGAACTaGTTCTCCGGCCCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNGDLRN*FSGPFG
Trigger: GCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCC...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACTCGCGGGCTGTGGTGTaGTGGGAGCGAGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNSRAVV*WERGVL
Trigger: AAGCACACCTCGCTCCCAGCACACCACAGCCCGCGA...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp ATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGCAGGTTTACCGAGACATCGCACTaGAGTGCGTCAATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: IRALLAHSRASFWNQSRFTETSH*SASMLR
Trigger: CCTCAACATTGACGCACTCCAGTGCGATGTCTCGGT...AAACCTGCTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAACCTGTGACCTGCGGTaGTGTACGGCATGTGTATCT +
Preference number: 4 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPTCDLR*CTACVS
Trigger: AGATACACATGCCGTACACCACCGCAGGTCACAGGT...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CCA 90 bp CCCACCGGCCCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCATCAAAGCAGGTTTTATaGGTTACACAGACGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PTGPVPSHFMMHKPGKASSKQVL*VTQTSL
Trigger: AAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGA...TGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGGGCCGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACCCAGCACCTGTGACCTaGGGTGGTGTACGGCATGTG +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNPAPVT*GGVRHV
Trigger: CACATGCCGTACACCACCGCAGGTCACAGGTGCTGG...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACCCTGTCAGCCACCCTTaGCTCCTCTGCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNPVSHP*LLCQFT
Trigger: GGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGG...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR TCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACACATGTCCTCCCTGGTaGCCTTCCCGCAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNTCPPW*PSRSCQ
Trigger: TTGACAACTGCGGGAAGGTCACCAGGGAGGACATGT...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACCCAGGTAGTGGTTTCTaGGCTCCGTGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNPGSGF*APCSRP
Trigger: TGGACGAGAACACGGAGCGCAGAAACCACTACCTGG...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR GCA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACGCACCTGCAGTCAGTTaGTGTTTGCTGTCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNAPAVS*CLLSEV
Trigger: CACCTCCGACAGCAAACAGCAACTGACTGCAGGTGC...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp GGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCAGCTTCCTCCGCGCCTTaGCGGCCGCTCGCGTACGCG +
Preference number: 5 (lower is better)
Translates to: GSLAPRSPLLLAWAAGPAASSAP*RPLAYA
Trigger: CGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAGC...TGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CGGGAGGTGGTGGCCGTCCTGAGGGGCCTGGGGCGGCAGGACGGCCGGCAGGTATGGAGTGCGTCAATGTaGAGGCGCTGCCCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: REVVAVLRGLGRQDGRQVWSASM*RRCPPG
Trigger: ACCGGGCGGGCAGCGCCTCAACATTGACGCACTCCA...TACCTGCCGGCCGTCCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCTCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS GCA 90 bp GTTGAGGCGCTGCCCGCCCGGTCCTCGCGGGCCCTCGCGGTTTGCTaGCCTCTCTCCGTCATCTGCGCTGAGGAGTTGTCCCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: VEALPARSSRALAVC*PLSVICAEELSRVL
Trigger: GAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGCGAGGACCGGGCGGGCAGCGCCTCAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCGCGGGCCCTCGCGGTTaGCTGCCCTCTCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: PGRNTHPKHPGTPCALQGAGPRG*LPSLRH
Trigger: ATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGC...GCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp GGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGTGGCCGTAGGGTGGCGGTGGGGTGGAGTGCGTCAATGTaGAGGCGCTGCCCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: GPPCPFGGTACGRRVAVGWSASM*RRCPPG
Trigger: ACCGGGCGGGCAGCGCCTCAACATTGACGCACTCCA...CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS TCA 90 bp CTCGCGGGCCCTCGCGGTTTGCTGCCCTCTCTCCGTCATCTGCGCTaGGGAGTTGTCCCGGGTGCTCGCGGCCCTCAGCTTTCTCAGCGG +
Preference number: 5 (lower is better)
Translates to: LAGPRGLLPSLRHLR*GVVPGARGPQLSQR
Trigger: CCGCTGAGAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 90 bp CGGTCCTCGCGGGCCCTCGCGGTTTGCTGCCCTCTCTCCGTCATCTaGGCTGAGGAGTTGTCCCGGGTGCTCGCGGCCCTCAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: RSSRALAVCCPLSVI*AEELSRVLAALSFL
Trigger: GAGAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGCGAGGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 90 bp AATGTTGAGGCGCTGCCCGCCCGGTCCTCGCGGGCCCTCGCGGTTTaGTGCCCTCTCTCCGTCATCTGCGCTGAGGAGTTGTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: NVEALPARSSRALAV*CPLSVICAEELSRV
Trigger: CACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGCGAGGACCGGGCGGGCAGCGCCTCAACATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGCTTCCTCCGCGCCTTaGCGGCCGCTCGCGTACGCG +
Preference number: 5 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLASSAP*RPLAYA
Trigger: CGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAGC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp GTGCTCCACTGTGGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCATCTGCGCTGAGGAGTaGTCCCGGGTGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: VLHCGRLSVWGLEWRVALICAEE*SRVLAA
Trigger: GGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGAT...GAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCCACAGTGGAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CGGGAGGTGGTGGCCGTCCTGAGGGGCCTGGGGCGGCAGGACGGCCGGCAGGTAAGCACCTGCAGTCAGTaGCTGTTTGCTGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: REVVAVLRGLGRQDGRQVSTCSQ*LFAVGG
Trigger: ACCTCCGACAGCAAACAGCAACTGACTGCAGGTGCT...TACCTGCCGGCCGTCCTGCCGCCCCAGGCCCCTCAGGACGGCCACCACCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGTTGGGCAGCTCCTGCTaGTCCCGCGCGCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PPAPVTCGGVRHVYLAPGLGSSC*SRARRS
Trigger: GGAGCGGCGCGCGCGGGACAAGCAGGAGCTGCCCAA...CCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp GCCCCGGGAGGAACACCCACCCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGAGCCCTTGGGGGACTaGAGGAACTGCTTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: APGGTPTPSIRALLAHSREPLGD*RNCFSG
Trigger: GCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTC...CCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGGGTGGGTGTTCCTCCCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp CCTTCTGCTGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAGGGAGCGAGGTGTGCTaGGCAGTGGCGCTAGGACGG +
Preference number: 5 (lower is better)
Translates to: PSAAWPPAGSRGCSLLSTGSEVC*AVALGR
Trigger: CCGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCC...TGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCAGCAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp GGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGCTGGGAGCGAGGTGTGCTaGGCAGTGGCGCTAGGACGG +
Preference number: 5 (lower is better)
Translates to: GSGARTGGSGGGGGGGGAGSEVC*AVALGR
Trigger: CCGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCC...AGCACCACCACCACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCGCTTCCTCCGCGCCTTaGCGGCCGCTCGCGTACGCG +
Preference number: 5 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVASSAP*RPLAYA
Trigger: CGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAGC...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCGCGGGCCCTCGCGGTTaGCTGCCCTCTCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCAGPRG*LPSLRH
Trigger: ATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGC...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp GTGGTGCTCGTGCCGCTGGATCACTGGCACCGCGTAGCCCTCTCCTGCTGGCGTTTCACACGGAGGGTCTaGCTGCTGCCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: VVLVPLDHWHRVALSCWRFTRRV*LLPEEW
Trigger: CCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGAA...ACGCCAGCAGGAGAGGGCTACGCGGTGCCAGTGATCCAGCGGCACGAGCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCGCCCTCCCTGCCCTTTaGGCGGTACCGCTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: QKSRGRLGLVHVSKVHHLALPAL*AVPLVA
Trigger: GGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGC...GAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGGGAGCGAGGTGTGCTaGGCAGTGGCGCTAGGACGG +
Preference number: 5 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLGSEVC*AVALGR
Trigger: CCGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCGCTTCCTCCGCGCCTTaGCGGCCGCTCGCGTACGCG +
Preference number: 5 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCASSAP*RPLAYA
Trigger: CGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAGC...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTGAAGCCCTGCCCGAGGAGTGGTaGACCGAGGCATCCACGACC +
Preference number: 5 (lower is better)
Translates to: HSLPASHWDSLQQSPLEALPEEW*TEASTT
Trigger: GGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCAG...GGCTTCAAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp GTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCGGGTTCACACGGAGGGTCTaGCTGCTGCCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: VTCGGVRHVYLAPGSGTGFTRRV*LLPEEW
Trigger: CCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGAA...CCCGGTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp TTCCCGGAGCCCTTGGGGGACTTGAGGAACTGCTTCTCCGGCCCCTTCGGCCGGTCCTGTCAGCCACCCTaGGCTCCTCTGCCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: FPEPLGDLRNCFSGPFGRSCQPP*APLPVH
Trigger: GTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGA...CCGGCCGAAGGGGCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp GGCAGGCTGAGCGTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGTCCTGTCAGCCACCCTaGGCTCCTCTGCCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: GRLSVWGLEWRVALPALLSCQPP*APLPVH
Trigger: GTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGA...CAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACACGCTCAGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp GTGTGGGGCCTTGAGTGGCGAGTGGCCCTCCCTGCCCTTTTGGCGGTACCGCTTGAGCCCTTGGGGGACTaGAGGAACTGCTTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: VWGLEWRVALPALLAVPLEPLGD*RNCFSG
Trigger: GCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTC...AAGCGGTACCGCCAAAAGGGCAGGGAGGGCCACTCGCCACTCAAGGCCCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAGGCTTCCCGGAGCCCTaGGGGGACTTGAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPGFPEP*GDLRNC
Trigger: GCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAAGCC...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp TGCTTGGCCTCCTGCGGGGAGCCGCGGATGCTCCCTGCTAAGCACAAGCTGCTTGGCTTCCCGGAGCCCTaGGGGGACTTGAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: CLASCGEPRMLPAKHKLLGFPEP*GDLRNC
Trigger: GCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAAGCC...AAGCAGCTTGTGCTTAGCAGGGAGCATCCGCGGCTCCCCGCAGGAGGCCAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp CAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCGGCTTCCCGGAGCCCTaGGGGGACTTGAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: QRAPGPCPRVQGAPPPSCGFPEP*GDLRNC
Trigger: GCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAAGCC...GCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CTGGGCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCGCCCTCCCTGCCCTTTaGGCGGTACCGCTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LGLVHVSKVHHLHHASTCALPAL*AVPLVA
Trigger: GGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGC...GCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGGGGAGCGAGGTGTGCTaGGCAGTGGCGCTAGGACGG +
Preference number: 5 (lower is better)
Translates to: PPAPVTCGGVRHVYLAPGGSEVC*AVALGR
Trigger: CCGTCCTAGCGCCACTGCCAAGCACACCTCGCTCCC...CCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CCCTCTCCTGCTGGCGTGGGCGGCAGGTCCCGCACCACCTCGTGCTCCACTGTGAGCACCTGCAGTCAGTaGCTGTTTGCTGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PSPAGVGGRSRTTSCSTVSTCSQ*LFAVGG
Trigger: ACCTCCGACAGCAAACAGCAACTGACTGCAGGTGCT...CACAGTGGAGCACGAGGTGGTGCGGGACCTGCCGCCCACGCCAGCAGGAGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGGAGGGCGCCTGGGCCTaGTCCACGTGTCCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: PPAPVTCGGVRHVYLAPGEGAWA*STCPRC
Trigger: GCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTC...CCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS GCA 90 bp TTTGCTGCCCTCTCTCCGTCATCTGCGCTGAGGAGTTGTCCCGGGTaGTCGCGGCCCTCAGCTTTCTCAGCGGGGAGTGCCACCTGTAGG +
Preference number: 5 (lower is better)
Translates to: FAALSPSSALRSCPG*SRPSAFSAGSATCR
Trigger: CCTACAGGTGGCACTCCCCGCTGAGAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 90 bp CCTGACGTGTGCAGACAACCTCCTGTCAGCCACCCTTGGCTCCTCTaGCAGTTCACCCTCCATCCTGCAACGGGTGGGCTCCCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PDVCRQPPVSHPWLL*QFTLHPATGGLPVL
Trigger: CAGGACCGGGAGCCCACCCGTTGCAGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGAGGTTGTCTGCACACGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000519933.5
ENST00000523688.1
ENST00000610777.2
ENST00000616539.4
ENST00000629123.1
ENST00000630368.2
CDS-3UTR CAA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTATCTGCGCTGAGGAGTaGTCCCGGGTGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLICAEE*SRVLAA
Trigger: GGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGAT...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCGCGGGCCCTCGCGGTTaGCTGCCCTCTCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVAGPRG*LPSLRH
Trigger: ATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGC...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp ACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCTCCTGGGAGCGGGACCTGCCCGAGGAGTGGTaGACCGAGGCATCCACGACC +
Preference number: 5 (lower is better)
Translates to: TCDLRWCTACVSGSWERDLPEEW*TEASTT
Trigger: GGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCAG...GTCCCGCTCCCAGGAGCCAGATACACATGCCGTACACCACCGCAGGTCACAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp TCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGAGCCCTTGGGGGACTaGAGGAACTGCTTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SEAGTTCSTSTCDLRWCTEPLGD*RNCFSG
Trigger: GCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTC...CGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCAGAGGGCGCCTGGGCCTaGTCCACGTGTCCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSEGAWA*STCPRC
Trigger: GCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTC...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS CCA 90 bp ACTGGGCCTCCTGACGTGTGCAGACAACCTCCTGTCAGCCACCCTTaGCTCCTCTGCCAGTTCACCCTCCATCCTGCAACGGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TGPPDVCRQPPVSHP*LLCQFTLHPATGGL
Trigger: GAGCCCACCCGTTGCAGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGAGGTTGTCTGCACACGTCAGGAGGCCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000523688.1
ENST00000610777.2
ENST00000616539.4
ENST00000629123.1
CDS CCA 90 bp GAGTGGACGCCTGACGTGTGCAGACAACCTCCTGTCAGCCACCCTTaGCTCCTCTGCCAGTTCACCCTCCATCCTGCAACGGGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: EWTPDVCRQPPVSHP*LLCQFTLHPATGGL
Trigger: GAGCCCACCCGTTGCAGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGAGGTTGTCTGCACACGTCAGGCGTCCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519933.5
ENST00000630368.2
CDS-3UTR CAA 90 bp CCCACCGGCCCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCATGGAGTGCGTCAATGTaGAGGCGCTGCCCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: PTGPVPSHFMMHKPGKASWSASM*RRCPPG
Trigger: ACCGGGCGGGCAGCGCCTCAACATTGACGCACTCCA...TGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGGGCCGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp CCTCAGCTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACTGCCCGAGGAGTGGTaGACCGAGGCATCCACGACC +
Preference number: 5 (lower is better)
Translates to: PQLFHSLPASHWDSLQQSLPEEW*TEASTT
Trigger: GGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCAG...TGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp GAGGTGTGCTTGGCAGTGGCGCTAGGACGGGTGGAAGTGGTGGTGGTGGTGGTGCCGACTCCTCTAGCCTaGTCCCCACTGTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: EVCLAVALGRVEVVVVVVPTPLA*SPLCVL
Trigger: CAGGACACACAGTGGGGACAAGGCTAGAGGAGTCGG...CACCACCACCACCACCACTTCCACCCGTCCTAGCGCCACTGCCAAGCACACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp TCCGAGGCTGGCACGACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGCCGACTCCTCTAGCCTaGTCCCCACTGTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SEAGTTCSTSTCDLRWCTPTPLA*SPLCVL
Trigger: CAGGACACACAGTGGGGACAAGGCTAGAGGAGTCGG...CGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGTCGTGCCAGCCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp GCCTTGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCGGCTTCCCGGAGCCCTaGGGGGACTTGAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: ALSTCPRCTTSIMPAPAVGFPEP*GDLRNC
Trigger: GCAGTTCCTCAAGTCCCCCAAGGGCTCCGGGAAGCC...GACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp ACGTGTTCCACCAGCACCTGTGACCTGCGGTGGTGTACGGCATGTGTATCTGGCGCCCTCCCTGCCCTTTaGGCGGTACCGCTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: TCSTSTCDLRWCTACVSGALPAL*AVPLVA
Trigger: GGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGC...GCCAGATACACATGCCGTACACCACCGCAGGTCACAGGTGCTGGTGGAACACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274150.4
ENST00000610777.2
CDS-3UTR CAA 90 bp TCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCGCCCTCCCTGCCCTTTaGGCGGTACCGCTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: STCPRCTTSIMPAPAVSCALPAL*AVPLVA
Trigger: GGCCACAAGCGGTACCGCCAAAAGGGCAGGGAGGGC...GCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS TCA 90 bp AGAGCCGCAGGTGCTCTAGGGAGTGGCTCATGCTGTAGTGGCACCTaGTCACCACTCTGGGACCACTGTAGCCACTGCGCCAGCCACACC +
Preference number: 5 (lower is better)
Translates to: RAAGALGSGSCCSGT*SPLWDHCSHCASHT
Trigger: GGTGTGGCTGGCGCAGTGGCTACAGTGGTCCCAGAGTGGTGATCAGGTGCCACTACAGCATGAGCCACTCCCTAGAGCACCTGCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1
CDS-3UTR CAA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGAGGGCGCCTGGGCCTaGTCCACGTGTCCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVEGAWA*STCPRC
Trigger: GCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTC...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 90 bp CGCAGAGCAGGAAGGAGAGTGGACGCCTGGGCACAGACAGTCAAGTaGCGTCCAGAGAAACAAGGTCACAGCCGACCCCCAGAACCCTGT +
Preference number: 5 (lower is better)
Translates to: RRAGRRVDAWAQTVK*RPEKQGHSRPPEPC
Trigger: ACAGGGTTCTGGGGGTCGGCTGTGACCTTGTTTCTCTGGACGGCACTTGACTGTCTGTGCCCAGGCGTCCACTCTCCTTCCTGCTCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1
CDS-3UTR CAA 90 bp GTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTGCTGTTTGCTGGAGTGCGTCAATGTaGAGGCGCTGCCCGCCCGGT +
Preference number: 5 (lower is better)
Translates to: VQGAPPPSCQHLQSVAVCWSASM*RRCPPG
Trigger: ACCGGGCGGGCAGCGCCTCAACATTGACGCACTCCA...GCAAACAGCAACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CTTTTCCATTCGCTCCCGGCCTCGCACTGGGACAGCCTACAGCAGTCACCCCTTTCCTGTCAGCCACCCTaGGCTCCTCTGCCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: LFHSLPASHWDSLQQSPLSCQPP*APLPVH
Trigger: GTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGA...AAGGGGTGACTGCTGTAGGCTGTCCCAGTGCGAGGCCGGGAGCGAATGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp AGGGCAGAAGAGCAGAGGGCGCCTGGGCCTTGTCCACGTGTCCAAGGTGCACCAAGCACCTGCAGTCAGTaGCTGTTTGCTGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RAEEQRAPGPCPRVQGAPSTCSQ*LFAVGG
Trigger: ACCTCCGACAGCAAACAGCAACTGACTGCAGGTGCT...TGGTGCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTCTGCTCTTCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGCGGGCCCTCGCGGTTaGCTGCCCTCTCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSAGPRG*LPSLRH
Trigger: ATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGC...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTTTCACACGGAGGGTCTaGCTGCTGCCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVFTRRV*LLPEEW
Trigger: CCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGAA...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CCCAAGCATCCGGGCACTCCTTGCGCACTCCAGGGCCTCATTTTGGAATCAAAGGAGCCCTTGGGGGACTaGAGGAACTGCTTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PKHPGTPCALQGLILESKEPLGD*RNCFSG
Trigger: GCCGGAGAAGCAGTTCCTCAAGTCCCCCAAGGGCTC...CTTTGATTCCAAAATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCCTGCCCGAGGAGTGGTaGACCGAGGCATCCACGACC +
Preference number: 5 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSLPEEW*TEASTT
Trigger: GGTCGTGGATGCCTCGGTCAACCACTCCTCGGGCAG...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp TGTCCACGTGTCCAAGGTGCACCACCTCCATCATGCCAGCACCTGCAGTCAGTTTCCTGTCAGCCACCCTaGGCTCCTCTGCCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: CPRVQGAPPPSCQHLQSVSCQPP*APLPVH
Trigger: GTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGA...AACTGACTGCAGGTGCTGGCATGATGGAGGTGGTGCACCTTGGACACGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp AGGAAACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGGGCGCCTGGGCCTaGTCCACGTGTCCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: RKHSGFRCVHRHVASRAEEGAWA*STCPRC
Trigger: GCACCTTGGACACGTGGACAAGGCCCAGGCGCCCTC...TTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAGCATCCGGGCACTCCTaGCGCACTCCAGGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPASGHS*RTPGPH
Trigger: ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGC...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp AACATAGTGGCTTCAGATGTGTTCACCGCCATGTGGCATCGAGGGCAGAAGAGCGCATCCGGGCACTCCTaGCGCACTCCAGGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: NIVASDVFTAMWHRGQKSASGHS*RTPGPH
Trigger: ATGAGGCCCTGGAGTGCGCAAGGAGTGCCCGGATGC...GCTCTTCTGCCCTCGATGCCACATGGCGGTGAACACATCTGAAGCCACTATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCATTCACACGGAGGGTCTaGCTGCTGCCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPFTRRV*LLPEEW
Trigger: CCACTCCTCGGGCAGCAGCAAGACCCTCCGTGTGAA...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS-3UTR CAA 90 bp TGGAATCAAAGCAGGTTTTATGGGTTACACAGACGAGCCTTAGAGCCAGGAAACATCTGCGCTGAGGAGTaGTCCCGGGTGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: WNQSRFYGLHRRALEPGNICAEE*SRVLAA
Trigger: GGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGAT...GTTTCCTGGCTCTAAGGCTCGTCTGTGTAACCCATAAAACCTGCTTTGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS-3UTR CAA 90 bp CCTGTCCCCTCTCACTTCATGATGCACAAGCCAGGCAAAGCCTCAGCTTTTCCAAGCACCTGCAGTCAGTaGCTGTTTGCTGTCGGAGGT +
Preference number: 5 (lower is better)
Translates to: PVPSHFMMHKPGKASAFPSTCSQ*LFAVGG
Trigger: ACCTCCGACAGCAAACAGCAACTGACTGCAGGTGCT...TGGAAAAGCTGAGGCTTTGCCTGGCTTGTGCATCATGAAGTGAGAGGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296849.10
ENST00000616539.4
CDS GCA 72 bp TCTCTCCGCTTGCGGGCGGCGGCGGCGTGCTTCGACTaGAGTTTCCCCATCGCCGCCGCCACGCCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: SLRLRAAAACFD*SFPIAAATPRR
Trigger: CCGGCGGGGCGTGGCGGCGGCGATGGGGAAACTGCAGTCGAAGCACGCCGCCGCCGCCCGCAAGCGGAGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS CAA 90 bp AGCTCCTGCTTGTCCCGCGCGCGCCGCTCCGCTTCCTCCGCGCCTTaGCGGCCGCTCGCGTACGCGGACGCCACGAAGCTGTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SSCLSRARRSASSAP*RPLAYADATKLSPS
Trigger: GGAAGGGGACAGCTTCGTGGCGTCCGCGTACGCGAGCGGCCGCAAAGGCGCGGAGGAAGCGGAGCGGCGCGCGCGGGACAAGCAGGAGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp GCGCTGCCCGCCCGGTCCTCGCGGGCCCTCGCGGTTTaGTGCCCTCTCTCCGTCATCTGCGCTGAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: ALPARSSRALAV*CPLSVICAEEL
Trigger: CAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGCGAGGACCGGGCGGGCAGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp CGGGCCCTCGCGGTTTGCTGCCCTCTCTCCGTCATCTaGGCTGAGGAGTTGTCCCGGGTGCTCGCGGCCCTC +
Preference number: 6 (lower is better)
Translates to: RALAVCCPLSVI*AEELSRVLAAL
Trigger: GAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp CTGCCCGCCCGGTCCTCGCGGGCCCTCGCGGTTTGCTaGCCTCTCTCCGTCATCTGCGCTGAGGAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: LPARSSRALAVC*PLSVICAEELS
Trigger: GGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGCCCGCGAGGACCGGGCGGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp CGGGCCTGGAGGTGCGAGGCCCTGCCCTGGGGCTCCTaGTTTGCTTGCACAGGAGGGGACCCAGGGCCGAAT +
Preference number: 6 (lower is better)
Translates to: RAWRCEALPWGS*FACTGGDPGPN
Trigger: ATTCGGCCCTGGGTCCCCTCCTGTGCAAGCAAAGCAGGAGCCCCAGGGCAGGGCCTCGCACCTCCAGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296849.10
ENST00000513296.2
ENST00000523688.1
ENST00000616539.4
ENST00000625977.1
ENST00000629123.1
CDS GCA 72 bp CCACGAAGCTGTCCCCTTCCGGGCTCTCTCTCCGCTTaGGGGCGGCGGCGGCGTGCTTCGACTGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: PRSCPLPGSLSA*GRRRRASTAVS
Trigger: GGAAACTGCAGTCGAAGCACGCCGCCGCCGCCCGCAAGCGGAGAGAGAGCCCGGAAGGGGACAGCTTCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS CCA 72 bp AGGGCCCCCGCTCCGAGCAGGGCTGGGGGTCAGTACTaGGCCTCCTGCTTGGAGCACAGAGAAGGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: RAPAPSRAGGQY*ASCLEHREGPD
Trigger: GTCAGGCCCTTCTCTGTGCTCCAAGCAGGAGGCCCAGTACTGACCCCCAGCCCTGCTCGGAGCGGGGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1
CDS CAA 90 bp GCCCTCGCGGTTTGCTGCCCTCTCTCCGTCATCTGCGCTGAGGAGTaGTCCCGGGTGCTCGCGGCCCTCAGCTTTCTCAGCGGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: ALAVCCPLSVICAEE*SRVLAALSFLSGEC
Trigger: GCACTCCCCGCTGAGAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp GAGACATCGCACTGGAGTGCGTCAATGTTGAGGCGCTaGCCGCCCGGTCCTCGCGGGCCCTCGCGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: ETSHWSASMLRR*PPGPRGPSRFA
Trigger: AGCAAACCGCGAGGGCCCGCGAGGACCGGGCGGGCAGCGCCTCAACATTGACGCACTCCAGTGCGATGTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS TCA 72 bp CCTCGCGGTTTGCTGCCCTCTCTCCGTCATCTGCGCTaGGGAGTTGTCCCGGGTGCTCGCGGCCCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: PRGLLPSLRHLR*GVVPGARGPQL
Trigger: AAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAACCGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp CTCTCTCCGTCATCTGCGCTGAGGAGTTGTCCCGGGTaGTCGCGGCCCTCAGCTTTCTCAGCGGGGAGTGCC +
Preference number: 6 (lower is better)
Translates to: LSPSSALRSCPG*SRPSAFSAGSA
Trigger: GGCACTCCCCGCTGAGAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS CCA 72 bp CGAGCAGGGCTGGGGGTCAGTACTGGGCCTCCTGCTTaGAGCACAGAGAAGGGCCTGACCCCCGCACAGACT +
Preference number: 6 (lower is better)
Translates to: RAGLGVSTGPPA*STEKGLTPAQT
Trigger: AGTCTGTGCGGGGGTCAGGCCCTTCTCTGTGCTCCAAGCAGGAGGCCCAGTACTGACCCCCAGCCCTGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1
CDS CAA 72 bp GTTTGCTGCCCTCTCTCCGTCATCTGCGCTGAGGAGTaGTCCCGGGTGCTCGCGGCCCTCAGCTTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: VCCPLSVICAEE*SRVLAALSFLS
Trigger: GCTGAGAAAGCTGAGGGCCGCGAGCACCCGGGACAACTCCTCAGCGCAGATGACGGAGAGAGGGCAGCAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000610777.2
ENST00000616539.4
CDS GCA 72 bp TGCAGACAACCTCCTGTCAGCCACCCTTGGCTCCTCTaGCAGTTCACCCTCCATCCTGCAACGGGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: CRQPPVSHPWLL*QFTLHPATGGL
Trigger: GAGCCCACCCGTTGCAGGATGGAGGGTGAACTGGCAGAGGAGCCAAGGGTGGCTGACAGGAGGTTGTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000274150.4
ENST00000296849.10
ENST00000519933.5
ENST00000523688.1
ENST00000610777.2
ENST00000616539.4
ENST00000629123.1
ENST00000630368.2
CDS TCA 72 bp GGTGCTCTAGGGAGTGGCTCATGCTGTAGTGGCACCTaGTCACCACTCTGGGACCACTGTAGCCACTGCGCC +
Preference number: 6 (lower is better)
Translates to: GALGSGSCCSGT*SPLWDHCSHCA
Trigger: GGCGCAGTGGCTACAGTGGTCCCAGAGTGGTGATCAGGTGCCACTACAGCATGAGCCACTCCCTAGAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1
CDS GCA 72 bp GGAAGGAGAGTGGACGCCTGGGCACAGACAGTCAAGTaGCGTCCAGAGAAACAAGGTCACAGCCGACCCCCA +
Preference number: 6 (lower is better)
Translates to: GRRVDAWAQTVK*RPEKQGHSRPP
Trigger: TGGGGGTCGGCTGTGACCTTGTTTCTCTGGACGGCACTTGACTGTCTGTGCCCAGGCGTCCACTCTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1
CDS CCA 72 bp CCACCTCCTCGCAGAGCAGGAAGGAGAGTGGACGCCTaGGCACAGACAGTCAAGTGCCGTCCAGAGAAACAA +
Preference number: 6 (lower is better)
Translates to: PPPRRAGRRVDA*AQTVKCRPEKQ
Trigger: TTGTTTCTCTGGACGGCACTTGACTGTCTGTGCCCAGGCGTCCACTCTCCTTCCTGCTCTGCGAGGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513296.2
ENST00000625977.1