RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKAIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185942

Ensembl transcript IDs: ENST00000519049.6, ENST00000523211.5, ENST00000523367.1, ENST00000524201.1, ENST00000623646.3, ENST00000674732.1, ENST00000674746.1, ENST00000674864.1, ENST00000674873.1, ENST00000675180.1, ENST00000675749.1, ENST00000676150.1

Found 1205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGAGGTACTCGGTTCATCTCACTGGGACTGGTTAGACAGTGGGTaGAGCCCACGGAGGGCAAGCAGAAGCAGGGTGGGGCATTGCCTC +
Preference number: 1 (lower is better)
Translates to: TEVLGSSHWDWLDSG*SPRRASRSRVGHCL
Trigger: GAGGCAATGCCCCACCCTGCTTCTGCTTGCCCTCCGTGGGCTGCACCCACTGTCTAACCAGTCCCAGTGAGATGAACCGAGTACCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp ATGCTCCATGATTCGTGGGAAAGCCAGGAAGCACAGTCTAGCCTCTaGAAGGAATGTCAGGCGGGTCGGATCCACCGAGGCGCGCAGTCA +
Preference number: 1 (lower is better)
Translates to: MLHDSWESQEAQSSL*KECQAGRIHRGAQS
Trigger: TGACTGCGCGCCTCGGTGGATCCGACCCGCCTGACATTCCTTCCAGAGGCTAGACTGTGCTTCCTGGCTTTCCCACGAATCATGGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CAGGGGTCGACAGACACTTCATACAGGAGAGCTCTGGCTAGCATCTaGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: QGSTDTSYRRALASI*QVPLWDTASRSRRR
Trigger: CCTCCTCCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGCTCTCCTGTATGAAGTGTCTGTCGACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CACCTGCCAGCTCTGAAGAGAGCAGCAGATCTCCTAGCACAGCACTaGAGCTCCGCTAAGGGACAGACTGCTTCCACAAGTGGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: HLPALKRAADLLAQH*SSAKGQTASTSGSL
Trigger: CAGGGACCCACTTGTGGAAGCAGTCTGTCCCTTAGCGGAGCTCCAGTGCTGTGCTAGGAGATCTGCTGCTCTCTTCAGAGCTGGCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CTGAGTGGAGCCCACTGCAGCGCTGCAAAGCCACTGAAGCCAGACTaGCTCTCTAGATTCCTCCTCTCTGGGCAGGGCATCTCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: LSGAHCSAAKPLKPD*LSRFLLSGQGISER
Trigger: TCTTTCAGAGATGCCCTGCCCAGAGAGGAGGAATCTAGAGAGGCAGTCTGGCTTCAGTGGCTTTGCAGCGCTGCAGTGGGCTCCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CATCCTGGGATCGCTGGGGCTCTGAAACTGGAAGAAGAAAAGCACTaGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGG +
Preference number: 1 (lower is better)
Translates to: HPGIAGALKLEEEKH*HLLSEPGLCRALLG
Trigger: CCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTTTCTTCTTCCAGTTTCAGAGCCCCAGCGATCCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CGTCGTTGCACAAATGGTGCTATGAGAGTCCTCACACCTGGAGCCTaGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTTCCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: RRCTNGAMRVLTPGA*CTEGLHVLPHLPSL
Trigger: GAGGGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp ACATCTCCCAACAGGGGTCGACAGACACTTCATACAGGAGAGCTCTaGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAA +
Preference number: 1 (lower is better)
Translates to: TSPNRGRQTLHTGEL*LASGRCPSGTQLPE
Trigger: TTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGCTCTCCTGTATGAAGTGTCTGTCGACCCCTGTTGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CCGAATCCGTCGTTGCACAAATGGTGCTATGAGAGTCCTCACACCTaGAGCCTGGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTTCC +
Preference number: 1 (lower is better)
Translates to: PNPSLHKWCYESPHT*SLVHRRAACASPSS
Trigger: GGAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 90 bp AGGGTTGCAAATGGGCTCTCCTTCATCCTGGGATCGCTGGGGCTCTaGAACTGGAAGAAGAAAAGCACTGGCACCTCCTATCAGAGCCCG +
Preference number: 1 (lower is better)
Translates to: RVANGLSFILGSLGL*NWKKKSTGTSYQSP
Trigger: CGGGCTCTGATAGGAGGTGCCAGTGCTTTTCTTCTTCCAGTTTCAGAGCCCCAGCGATCCCAGGATGAAGGAGAGCCCATTTGCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp ACTTCATACAGGAGAGCTCTGGCTAGCATCTGGCAGGTGCCCCTCTaGGACACAGCTTCCAGAAGTAGGAGGAGGCAGCAATCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: TSYRRALASIWQVPL*DTASRSRRRQQSLL
Trigger: CAGCAAAGATTGCTGCCTCCTCCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGCTCTCCTGTATGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp CCATTAAAGCCCAAGAGGATGGAGTTTGGAGAGCTTCTGGATAGCTaGACACAGGGAGGTTCCTGTAGAGTGATGCGCCCAGGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: PLKPKRMEFGELLDS*TQGGSCRVMRPGRA
Trigger: TGCCCTCCCTGGGCGCATCACTCTACAGGAACCTCCCTGTGTTCAGCTATCCAGAAGCTCTCCAAACTCCATCCTCTTGGGCTTTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR GCA 90 bp CCCTCTGGGACACAGCTTCCAGAAGTAGGAGGAGGCAGCAATCTTTaGTGTTCTGCAGCCTCTGCTGGTGATACCCATGCAAACAGGGTA +
Preference number: 1 (lower is better)
Translates to: PSGTQLPEVGGGSNL*CSAASAGDTHANRV
Trigger: TACCCTGTTTGCATGGGTATCACCAGCAGAGGCTGCAGAACAGCAAAGATTGCTGCCTCCTCCTACTTCTGGAAGCTGTGTCCCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTaGTATGAGAGTCCTCACACCTGGAGCCTGGTGCACAGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: PQNLVSRPNPSLHKW*YESPHTWSLVHRRA
Trigger: AGCCCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp TGTCCACTGGCTATGGCTCTTGCCCCTGTGTACAGATACAGGCTCTaGACAAGTTCACCAAATCCCTTAGGCTTCAGCCCCCTCATCTGC +
Preference number: 1 (lower is better)
Translates to: CPLAMALAPVYRYRL*TSSPNPLGFSPLIC
Trigger: GCAGATGAGGGGGCTGAAGCCTAAGGGATTTGGTGAACTTGTCCAGAGCCTGTATCTGTACACAGGGGCAAGAGCCATAGCCAGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp ATTTCTGCATTTCCAACTGAGGTACTCGGTTCATCTCACTGGGACTaGTTAGACAGTGGGTGCAGCCCACGGAGGGCAAGCAGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: ISAFPTEVLGSSHWD*LDSGCSPRRASRSR
Trigger: CCTGCTTCTGCTTGCCCTCCGTGGGCTGCACCCACTGTCTAACCAGTCCCAGTGAGATGAACCGAGTACCTCAGTTGGAAATGCAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CGCCCAGGGAGGGCATGGAAGCTCTGTGCCCCTTCCCTGGTACCTTaGCCTATGTGTCTCTTCGTCTTTGTCCTTTGTAAGTCCTTTATA +
Preference number: 1 (lower is better)
Translates to: RPGRAWKLCAPSLVP*PMCLFVFVLCKSFI
Trigger: TATAAAGGACTTACAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAGAGCTTCCATGCCCTCCCTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR GCA 90 bp TGCTGTCTCCTGTCTGAAGAATCTGAGCATTCAGTAGGCACGGCCTaGTGTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATA +
Preference number: 1 (lower is better)
Translates to: CCLLSEESEHSVGTA*CAKTQATVGAAYGI
Trigger: TATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCACAGCAGGCCGTGCCTACTGAATGCTCAGATTCTTCAGACAGGAGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR GCA 90 bp CCCCAACTTTTGCTCCCATGTTCTCTGTCCACTGGCTATGGCTCTTaGCCCTGTGTACAGATACAGGCTCTGGACAAGTTCACCAAATCC +
Preference number: 1 (lower is better)
Translates to: PQLLLPCSLSTGYGS*PCVQIQALDKFTKS
Trigger: GGATTTGGTGAACTTGTCCAGAGCCTGTATCTGTACACAGGGGCAAGAGCCATAGCCAGTGGACAGAGAACATGGGAGCAAAAGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CTGATGGCCACCAAGTGCAGAGGAAAGAAGACTAGACTGAGAGCTTaGATAGCAGCCCCAGTGGGATGGGACATGAAGCAAAACCACTGT +
Preference number: 1 (lower is better)
Translates to: LMATKCRGKKTRLRA*IAAPVGWDMKQNHC
Trigger: ACAGTGGTTTTGCTTCATGTCCCATCCCACTGGGGCTGCTATGCAAGCTCTCAGTCTAGTCTTCTTTCCTCTGCACTTGGTGGCCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp AGTAGGGAAATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTaGACAAATGGTGCTATGAGAGTCCTCACACCTGGAGCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: SREILKTLSVGRIRR*TNGAMRVLTPGAWC
Trigger: GCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTCCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp ACGCTTTTCCCATGGTCTTCGCAATCCACAGACAAGGAGATCCCTTaGGTGCCTACACCACAAGGGCCCTGGATTTCAAGCACAAAACTG +
Preference number: 1 (lower is better)
Translates to: TLFPWSSQSTDKEIP*VPTPQGPWISSTKL
Trigger: CAGTTTTGTGCTTGAAATCCAGGGCCCTTGTGGTGTAGGCACCCAAGGGATCTCCTTGTCTGTGGATTGCGAAGACCATGGGAAAAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp AATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATaGTGCTATGAGAGTCCTCACACCTGGAGCCTGGTGCACAGAAGG +
Preference number: 1 (lower is better)
Translates to: NPQNLVSRPNPSLHK*CYESPHTWSLVHRR
Trigger: CCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAAC +
Preference number: 1 (lower is better)
Translates to: GSLPNSVSDPHSSSL*GVRRAAIRDQWSSN
Trigger: GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR TCA 90 bp CTTGGGTGCCTACACCACAAGGGCCCTGGATTTCAAGCACAAAACTaGGTGGCCATTTGGGCAGACACTGAGCTAGCTGTAGGAGTTTTT +
Preference number: 1 (lower is better)
Translates to: LGCLHHKGPGFQAQN*VAIWADTELAVGVF
Trigger: AAAAACTCCTACAGCTAGCTCAGTGTCTGCCCAAATGGCCACTCAGTTTTGTGCTTGAAATCCAGGGCCCTTGTGGTGTAGGCACCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp GAACAGCTGTCTGCAGCTCCCAGCAAGACCAACACAGAAAGTGGGTaGTTTCTGCATTTCCAACTGAGGTACTCGGTTCATCTCACTGGG +
Preference number: 1 (lower is better)
Translates to: EQLSAAPSKTNTESG*FLHFQLRYSVHLTG
Trigger: CCCAGTGAGATGAACCGAGTACCTCAGTTGGAAATGCAGAAATCACCCACTTTCTGTGTTGGTCTTGCTGGGAGCTGCAGACAGCTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp AAGCCCTTGTCTAGTCAGGACTTGTTACAGCTGATGGCCACCAAGTaGAGAGGAAAGAAGACTAGACTGAGAGCTTGCATAGCAGCCCCA +
Preference number: 1 (lower is better)
Translates to: KPLSSQDLLQLMATK*RGKKTRLRACIAAP
Trigger: TGGGGCTGCTATGCAAGCTCTCAGTCTAGTCTTCTTTCCTCTGCACTTGGTGGCCATCAGCTGTAACAAGTCCTGACTAGACAAGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp AAAAGCAAAGACAAGACAAAAGCTAGGCAAAGACCCACTGGAAGGTaGCTTTCTGATGCTCAGACCCAAGCAGAGGGAAGGCGAGGAGCA +
Preference number: 1 (lower is better)
Translates to: KSKDKTKARQRPTGR*LSDAQTQAEGRRGA
Trigger: TGCTCCTCGCCTTCCCTCTGCTTGGGTCTGAGCATCAGAAAGCCACCTTCCAGTGGGTCTTTGCCTAGCTTTTGTCTTGTCTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp CCAGCAAGACCAACACAGAAAGTGGGTGATTTCTGCATTTCCAACTaGGGTACTCGGTTCATCTCACTGGGACTGGTTAGACAGTGGGTG +
Preference number: 1 (lower is better)
Translates to: PARPTQKVGDFCISN*GTRFISLGLVRQWV
Trigger: CACCCACTGTCTAACCAGTCCCAGTGAGATGAACCGAGTACCTCAGTTGGAAATGCAGAAATCACCCACTTTCTGTGTTGGTCTTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CTGCTTGTCTTTGACTTCTCCACTCCAGCATGGATTGCATTTTGCTaGTCCCCCACAATACCATCCACAACCTTTCTATGGATTCCGCGC +
Preference number: 1 (lower is better)
Translates to: LLVFDFSTPAWIAFC*SPTIPSTTFLWIPR
Trigger: GCGCGGAATCCATAGAAAGGTTGTGGATGGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAAGACAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR TCA 90 bp GCTAAGATCCACTGGATTGAAATTCTTACTTCCAGCACAGCAGTCTaGAGTAGACCTGGGATGCTCAAGCTTGGTTGGGGGAGAGGTATC +
Preference number: 1 (lower is better)
Translates to: AKIHWIEILTSSTAV*SRPGMLKLGWGRGI
Trigger: GATACCTCTCCCCCAACCAAGCTTGAGCATCCCAGGTCTACTTCAGACTGCTGTGCTGGAAGTAAGAATTTCAATCCAGTGGATCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp TGTACACCTCTTTTCTCAGATTGGAAGGCATCTCCTGAGGTTCTCTaGATCACTGACTCCTCGTTCTTCAGGTCTCAGCTCAAATGCTGC +
Preference number: 1 (lower is better)
Translates to: CTPLFSDWKASPEVL*ITDSSFFRSQLKCC
Trigger: GCAGCATTTGAGCTGAGACCTGAAGAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAGATGCCTTCCAATCTGAGAAAAGAGGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR CCA 90 bp CCAAATCCCTTAGGCTTCAGCCCCCTCATCTGCAGAATAGTGGCTTaGATTCCACCATCTTCAAGGTCCCTGCCAGCTTTTCTTTATTTG +
Preference number: 1 (lower is better)
Translates to: PNPLGFSPLICRIVA*IPPSSRSLPAFLYL
Trigger: CAAATAAAGAAAAGCTGGCAGGGACCTTGAAGATGGTGGAATCCAAGCCACTATTCTGCAGATGAGGGGGCTGAAGCCTAAGGGATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp ATAGGAACAGCTGTCTGCAGCTCCCAGCAAGACCAACACAGAAAGTaGGTGATTTCTGCATTTCCAACTGAGGTACTCGGTTCATCTCAC +
Preference number: 1 (lower is better)
Translates to: IGTAVCSSQQDQHRK*VISAFPTEVLGSSH
Trigger: GTGAGATGAACCGAGTACCTCAGTTGGAAATGCAGAAATCACCCACTTTCTGTGTTGGTCTTGCTGGGAGCTGCAGACAGCTGTTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTaGCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGTG +
Preference number: 1 (lower is better)
Translates to: PAKADLSFQGFLESD*QSSYLQHFQFSSCV
Trigger: CACACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp AATGTGATGGGAAGCAAGTTTGTTTTGAGTGTGGGCAAGATCTTGTaGAGGATGACAACTTCCCACAGAGAAAGCATGCCACACCCATGC +
Preference number: 1 (lower is better)
Translates to: NVMGSKFVLSVGKIL*RMTTSHRESMPHPC
Trigger: GCATGGGTGTGGCATGCTTTCTCTGTGGGAAGTTGTCATCCTCCACAAGATCTTGCCCACACTCAAAACAAACTTGCTTCCCATCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp TACCTCCAGCATTTCCAATTCTCTTCCTGTGTGGAATATCCCAAATaGAGTAGAAACGCTGGGCTTCAGAGGCAGACCCTGCAGTCATTT +
Preference number: 1 (lower is better)
Translates to: YLQHFQFSSCVEYPK*SRNAGLQRQTLQSF
Trigger: AAATGACTGCAGGGTCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACACAGGAAGAGAATTGGAAATGCTGGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 90 bp CCTTTGTCTTACAGAAGCATAGCCCTCAAAGAGAAACCAGGAAGATaGAAGGCAGGGAGAAGAAAAGAGAGAAGAGGAGGTGGCAGATCA +
Preference number: 1 (lower is better)
Translates to: PLSYRSIALKEKPGR*KAGRRKERRGGGRS
Trigger: TGATCTGCCACCTCCTCTTCTCTCTTTTCTTCTCCCTGCCTTTCATCTTCCTGGTTTCTCTTTGAGGGCTATGCTTCTGTAAGACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp CTCCCCAAGCTTTTTGCACAAGACAGATGGTCACTAAGTGTTTGTTaGATGCTTAGGGAGACAGAAGAGGGTTGCAAATGGGCTCTCCTT +
Preference number: 1 (lower is better)
Translates to: LPKLFAQDRWSLSVC*MLRETEEGCKWALL
Trigger: AAGGAGAGCCCATTTGCAACCCTCTTCTGTCTCCCTAAGCATTCAACAAACACTTAGTGACCATCTGTCTTGTGCAAAAAGCTTGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp TGCAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTCCATGGA +
Preference number: 1 (lower is better)
Translates to: CKDRHLSQPSGTLTW*IILAEQACVFFFHG
Trigger: TCCATGGAAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CCA 90 bp GATCATAGTTCCACTTCATTGATGAGGAAAACTGTAGTGCAGAGATaGCAAACACTGTCCAAGAACATGGTGGTGGATGGGACCCAAACC +
Preference number: 1 (lower is better)
Translates to: DHSSTSLMRKTVVQR*QTLSKNMVVDGTQT
Trigger: GGTTTGGGTCCCATCCACCACCATGTTCTTGGACAGTGTTTGCCATCTCTGCACTACAGTTTTCCTCATCAATGAAGTGGAACTATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp ATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGTaGAATATCCCAAATGGAGTAGAAACGCTGGGCTTCAGAGGCAGA +
Preference number: 1 (lower is better)
Translates to: IAKALTSSISNSLPV*NIPNGVETLGFRGR
Trigger: TCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 90 bp CTATTATTGCTCACGGTGCCAGGGTTCTTCCTAGCCCATTTGTGTTaGAACCATATAGAACTGCTTGTCTCTGCAGTTCCCAAGAACAAC +
Preference number: 1 (lower is better)
Translates to: LLLLTVPGFFLAHLC*NHIELLVSAVPKNN
Trigger: GTTGTTCTTGGGAACTGCAGAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGCACCGTGAGCAATAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp AATGCTAATAATACAAAGGCTGTGACCAAAATGCTCCATGATTCGTaGGAAAGCCAGGAAGCACAGTCTAGCCTCTGGAAGGAATGTCAG +
Preference number: 1 (lower is better)
Translates to: NANNTKAVTKMLHDS*ESQEAQSSLWKECQ
Trigger: CTGACATTCCTTCCAGAGGCTAGACTGTGCTTCCTGGCTTTCCCACGAATCATGGAGCATTTTGGTCACAGCCTTTGTATTATTAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp AAAAACAGAGTTTGTTGTTTCTGTGGGCTCTTCATAGCGCTTGAGTaGAAAGCAAGAGCTCCAGACAGGGTACAGAGGAGTGTTTTGACA +
Preference number: 1 (lower is better)
Translates to: KNRVCCFCGLFIALE*KARAPDRVQRSVLT
Trigger: TGTCAAAACACTCCTCTGTACCCTGTCTGGAGCTCTTGCTTTCCACTCAAGCGCTATGAAGAGCCCACAGAAACAACAAACTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp TTCAAAGAAGGACGCAACAATCATAATTTGTCTCCCAGTGGATACTaGCAAGTAGTGTGGCACGAAGGAGGTCATCTAATGCTGTCTCAC +
Preference number: 1 (lower is better)
Translates to: FKEGRNNHNLSPSGY*QVVWHEGGHLMLSH
Trigger: GTGAGACAGCATTAGATGACCTCCTTCGTGCCACACTACTTGCCAGTATCCACTGGGAGACAAATTATGATTGTTGCGTCCTTCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCTaGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGT +
Preference number: 1 (lower is better)
Translates to: HLLSSLQGQAFISAI*NLNLVHHPGRTSMC
Trigger: ACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR GCA 90 bp GGTTACCTACAAAGGGAAGCCCATCATACTAACAGCAGATCTCTCTaGAGAAACCCTAAAAGCCACAAGAGATTGGGGGCTAATATTCAA +
Preference number: 1 (lower is better)
Translates to: GYLQREAHHTNSRSL*RNPKSHKRLGANIQ
Trigger: TTGAATATTAGCCCCCAATCTCTTGTGGCTTTTAGGGTTTCTGCAGAGAGATCTGCTGTTAGTATGATGGGCTTCCCTTTGTAGGTAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp GAGTCTCGGTCCTTGTCTCTAGGGAAATCACATCCGGCTCTTTGCTaGCTGTCTCCAGAATTTCGAAATAAAAAGAGAAATAGACCTCTA +
Preference number: 1 (lower is better)
Translates to: ESRSLSLGKSHPALC*LSPEFRNKKRNRPL
Trigger: TAGAGGTCTATTTCTCTTTTTATTTCGAAATTCTGGAGACAGTCAGCAAAGAGCCGGATGTGATTTCCCTAGAGACAAGGACCGAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp TGTAGTGACCATGTCTTTGCTGAAAACCCTACTGGATACGCACAATaGAGAGTGCATTCTATAAGACTGGAGGCAAAAGCAATAACTGCA +
Preference number: 1 (lower is better)
Translates to: CSDHVFAENPTGYAQ*RVHSIRLEAKAITA
Trigger: TGCAGTTATTGCTTTTGCCTCCAGTCTTATAGAATGCACTCTGCATTGTGCGTATCCAGTAGGGTTTTCAGCAAAGACATGGTCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CTTCCTAGCCCATTTGTGTTGAAACCATATAGAACTGCTTGTCTCTaGAGTTCCCAAGAACAACTTCATCCTGACTCTCTGGATACTCAT +
Preference number: 1 (lower is better)
Translates to: LPSPFVLKPYRTACL*SSQEQLHPDSLDTH
Trigger: ATGAGTATCCAGAGAGTCAGGATGAAGTTGTTCTTGGGAACTGCAGAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp TCAATGTGTAATTACGACACTTCGAATGGATCGATTGTGTCTGTTTaGTGTAAGGCGAGCTCCAGAGCCTGGCACATTATAGAAGTTCAA +
Preference number: 1 (lower is better)
Translates to: SMCNYDTSNGSIVSV*CKASSRAWHIIEVQ
Trigger: TTGAACTTCTATAATGTGCCAGGCTCTGGAGCTCGCCTTACACCAAACAGACACAATCGATCCATTCGAAGTGTCGTAATTACACATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR CCA 90 bp CTTACTCTGACCAGACACACAATTGCATATGGAGAAGCTGAGGTTTaGCAAGAACATACAGTGCATGTAGTGACCATGTCTTTGCTGAAA +
Preference number: 1 (lower is better)
Translates to: LTLTRHTIAYGEAEV*QEHTVHVVTMSLLK
Trigger: TTTCAGCAAAGACATGGTCACTACATGCACTGTATGTTCTTGCCAAACCTCAGCTTCTCCATATGCAATTGTGTGTCTGGTCAGAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp TTGAATATCCTAAGAGAAAAGTTCCTGACTGCAGGTCTATGTTTGTaGTTTCTGTCCCACAAGCCCATGAGCTGTATGTTTAGGTCTGAC +
Preference number: 1 (lower is better)
Translates to: LNILREKFLTAGLCL*FLSHKPMSCMFRSD
Trigger: GTCAGACCTAAACATACAGCTCATGGGCTTGTGGGACAGAAATCACAAACATAGACCTGCAGTCAGGAACTTTTCTCTTAGGATATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp ATTTTCCCTTACTCTGACCAGACACACAATTGCATATGGAGAAGCTaGGGTTTGGCAAGAACATACAGTGCATGTAGTGACCATGTCTTT +
Preference number: 1 (lower is better)
Translates to: IFPYSDQTHNCIWRS*GLARTYSACSDHVF
Trigger: AAAGACATGGTCACTACATGCACTGTATGTTCTTGCCAAACCTCAGCTTCTCCATATGCAATTGTGTGTCTGGTCAGAGTAAGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp AACAGGTGTTGGTTGCAGAGGGCAAATTCAAGGAAAGCAAATCATTaGCCATGTGAAATCCACACTAGGATGTATCTCCTAAACTCCCTA +
Preference number: 1 (lower is better)
Translates to: NRCWLQRANSRKANH*PCEIHTRMYLLNSL
Trigger: TAGGGAGTTTAGGAGATACATCCTAGTGTGGATTTCACATGGTCAATGATTTGCTTTCCTTGAATTTGCCCTCTGCAACCAACACCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp AGCCACTGTGTCTGGTCATCTGTTCCCTTTCTAAATTGTTCACTGTaGAGTTATATGAAGAGTACTTTCCTCTGTCAGTTCACTTTTGGG +
Preference number: 1 (lower is better)
Translates to: SHCVWSSVPFLNCSL*SYMKSTFLCQFTFG
Trigger: CCCAAAAGTGAACTGACAGAGGAAAGTACTCTTCATATAACTGCACAGTGAACAATTTAGAAAGGGAACAGATGACCAGACACAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp ACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTaGAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGG +
Preference number: 1 (lower is better)
Translates to: TLLLSFPSIIIFFPV*KDRHLSQPSGTLTW
Trigger: CCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR TCA 90 bp GACAGTGTGGCAATTCCTCAAGGATCTAGAACTAGAAATACCATTTaGTCCAGCAATCCCCTACTGGGTGTATACCCAAAGGATTATAAA +
Preference number: 1 (lower is better)
Translates to: DSVAIPQGSRTRNTI*SSNPLLGVYPKDYK
Trigger: TTTATAATCCTTTGGGTATACACCCAGTAGGGGATTGCTGGATCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATTGCCACACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp AATGGCAGAAATTCCTTAGTGCTTTCAGATCACAAGTTCTCAATGTaGGTTATCACTCCTAAGTTCCTACCACAGGATGAGAAAGAGCTT +
Preference number: 1 (lower is better)
Translates to: NGRNSLVLSDHKFSM*VITPKFLPQDEKEL
Trigger: AAGCTCTTTCTCATCCTGTGGTAGGAACTTAGGAGTGATAACTCACATTGAGAACTTGTGATCTGAAAGCACTAAGGAATTTCTGCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp AGAGATAGCATCTCATTATACCATAGCTCCTATTCAGAACATGCATaGAGCATGTCTACAGAATTACTGACGCTTTGCCCTTTTAGCCAT +
Preference number: 1 (lower is better)
Translates to: RDSISLYHSSYSEHA*SMSTELLTLCPFSH
Trigger: ATGGCTAAAAGGGCAAAGCGTCAGTAATTCTGTAGACATGCTTCATGCATGTTCTGAATAGGAGCTATGGTATAATGAGATGCTATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp TCTACTATCAACAGACAGGAGATGAGATTTCCTTTTACAGAGTGCTaGCAAACCAAGAATGTGATGGGAAGCAAGTTTGTTTTGAGTGTG +
Preference number: 1 (lower is better)
Translates to: STINRQEMRFPFTEC*QTKNVMGSKFVLSV
Trigger: CACACTCAAAACAAACTTGCTTCCCATCACATTCTTGGTTTGTCAGCACTCTGTAAAAGGAAATCTCATCTCCTGTCTGTTGATAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CAGAGTGCATTCTATAAGACTGGAGGCAAAAGCAATAACTGCAAATaGTCATTTCCATGGAACAGTAACTGTGACAGTACTTCATTGGAA +
Preference number: 1 (lower is better)
Translates to: QSAFYKTGGKSNNCK*SFPWNSNCDSTSLE
Trigger: TTCCAATGAAGTACTGTCACAGTTACTGTTCCATGGAAATGAGCATTTGCAGTTATTGCTTTTGCCTCCAGTCTTATAGAATGCACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp ACAATGCAGAGTGCATTCTATAAGACTGGAGGCAAAAGCAATAACTaGAAATGCTCATTTCCATGGAACAGTAACTGTGACAGTACTTCA +
Preference number: 1 (lower is better)
Translates to: TMQSAFYKTGGKSNN*KCSFPWNSNCDSTS
Trigger: TGAAGTACTGTCACAGTTACTGTTCCATGGAAATGAGCATTTGCAGTTATTGCTTTTGCCTCCAGTCTTATAGAATGCACTCTGCATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 90 bp CATCTTCCCTCCCTCCATTGCAATAATCAAGCAGCCCTACCTACATaGTGGGTCTTTCCATTTTTATCGAATTGCAAGAAAATATTTCAA +
Preference number: 1 (lower is better)
Translates to: HLPSLHCNNQAALPT*WVFPFLSNCKKIFQ
Trigger: TTGAAATATTTTCTTGCAATTCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAATGGAGGGAGGGAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 90 bp TGTTGGTGGGAGTGTAATTTACTTCAACCATTGTGGATGACAGTGTaGCAATTCCTCAAGGATCTAGAACTAGAAATACCATTTGATCCA +
Preference number: 1 (lower is better)
Translates to: CWWECNLLQPLWMTV*QFLKDLELEIPFDP
Trigger: TGGATCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATTGCCACACTGTCATCCACAATGGTTGAAGTAAATTACACTCCCACCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp CAACACAGTATTAGAAGTTCTGGCCAGGGCAAACAGGCAAGAGAATaGAATAAAGCGTATTCGAATAGGAAGAGAGAAAGTCAAATTATC +
Preference number: 1 (lower is better)
Translates to: QHSIRSSGQGKQARE*NKAYSNRKRESQII
Trigger: GATAATTTGACTTTCTCTCTTCCTATTCGAATACGCTTTATTTCATTCTCTTGCCTGTTTGCCCTGGCCAGAACTTCTAATACTGTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp GAGTGTTCAATTTCAAGAGACTCAATTCCAAAATTTATGTGCCTTTaGAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTC +
Preference number: 1 (lower is better)
Translates to: ECSISRDSIPKFMCL*KSMAILDLASLIPF
Trigger: GAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTTGAAATTGAACACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CCA 90 bp CATGAATATGAAGATTCTTTGTTGAGTCTTACTGTTGAATGTGTCTaGCTAAGTTTTTGTCTCCCACCTCTAGAAAAAGGTAGTGACACT +
Preference number: 1 (lower is better)
Translates to: HEYEDSLLSLTVECV*LSFCLPPLEKGSDT
Trigger: AGTGTCACTACCTTTTTCTAGAGGTGGGAGACAAAAACTTAGCCAGACACATTCAACAGTAAGACTCAACAAAGAATCTTCATATTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 90 bp CAGAAACGCCACATTGAAAGGGCTCTCCATTCAAATTGTAGACATTaGAGATATGTATGGTTATCAGAAAAAGTTTTCCAGCAGATGAAA +
Preference number: 1 (lower is better)
Translates to: QKRHIERALHSNCRH*RYVWLSEKVFQQMK
Trigger: TTTCATCTGCTGGAAAACTTTTTCTGATAACCATACATATCTTCAATGTCTACAATTTGAATGGAGAGCCCTTTCAATGTGGCGTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 90 bp ATGTCTGTTTGTATCACTGAAGCAAGCAGTGTTCATAGTTGTTTTTaGTTGTTAGGAGCTGTAGACGTGCTCTTTTTAATGCAAATTCAG +
Preference number: 1 (lower is better)
Translates to: MSVCITEASSVHSCF*LLGAVDVLFLMQIQ
Trigger: CTGAATTTGCATTAAAAAGAGCACGTCTACAGCTCCTAACAATCAAAAACAACTATGAACACTGCTTGCTTCAGTGATACAAACAGACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp CACACAACTACATGGAAACTGAACAACCTGCTTCTGAATGACTCCTaGGAAAATAATGAGATCACAGCAGAAATAAATAAGTTCTTTGAA +
Preference number: 1 (lower is better)
Translates to: HTTTWKLNNLLLNDS*ENNEITAEINKFFE
Trigger: TTCAAAGAACTTATTTATTTCTGCTGTGATCTCATTATTTTCCCAGGAGTCATTCAGAAGCAGGTTGTTCAGTTTCCATGTAGTTGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 90 bp ACTCAATTCCAAAATTTATGTGCCTTTGAAAAAGTATGGCCATTCTaGACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCA +
Preference number: 1 (lower is better)
Translates to: TQFQNLCAFEKVWPF*TLLLSFPSIIIFFP
Trigger: TGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CCA 90 bp ACTTTCCTCTGTCAGTTCACTTTTGGGCATAATATCCTTAAGTTGTaGCCTATTTATCACAAATATTTCAACATGGTTCTTAGACACTTC +
Preference number: 1 (lower is better)
Translates to: TFLCQFTFGHNILKL*PIYHKYFNMVLRHF
Trigger: GAAGTGTCTAAGAACCATGTTGAAATATTTGTGATAAATAGGCCACAACTTAAGGATATTATGCCCAAAAGTGAACTGACAGAGGAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGATAGAAGGCACGGCCTaGGGAAGGGCTGGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRIEGTA*GRAGQG
Trigger: ACCTTGGCCAGCCCTTCCTCAGGCCGTGCCTTCTAT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAGCTTCCTGCGGTGCTaGACGAGGTCAGCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRSFLRC*TRSAED
Trigger: GTCTTCTGCTGACCTCGTGCAGCACCGCAGGAAGCT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGCTCTGGCTAGCATCTaGCAGGTGCCCCTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDALASI*QVPLWD
Trigger: GTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CCTTGCCTCTGCCCACCACCACCAGCAGGAAAGATAGGCCAGCTTGAAGGCAAACTGACGTGGGGAGCCTaGGGAGGAGGGGAGATCACA +
Preference number: 2 (lower is better)
Translates to: PCLCPPPPAGKIGQLEGKLTWGA*GGGEIT
Trigger: TGTGATCTCCCCTCCTCCCCAGGCTCCCCACGTCAG...TTTGCCTTCAAGCTGGCCTATCTTTCCTGCTGGTGGTGGTGGGCAGAGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTGCCGTGAGTGGGGGTaGACTCCGGTCCAGATACTA +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDCREWG*TPVQIL
Trigger: TAGTATCTGGACCGGAGTGCACCCCCACTCACGGCA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CCTTGCCTCTGCCCACCACCACCAGCAGGAAAGATAGGCCAGCTTGAAGGCAAAACACCTGGAGCCTGGTaGACAGAAGGGCTGCATGTG +
Preference number: 2 (lower is better)
Translates to: PCLCPPPPAGKIGQLEGKTPGAW*TEGLHV
Trigger: CACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGT...TTTGCCTTCAAGCTGGCCTATCTTTCCTGCTGGTGGTGGTGGGCAGAGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp GCAGTGCTGTTCAGAAGCCTGGCGTCCCTACACCAGCGGAGGCAGGAGAGGTCGTCGTTGCACAAATGGTaGTATGAGAGTCCTCACACC +
Preference number: 2 (lower is better)
Translates to: AVLFRSLASLHQRRQERSSLHKW*YESPHT
Trigger: GGTGTGAGGACTCTCATAGCACCATTTGTGCAACGA...CGACCTCTCCTGCCTCCGCTGGTGTAGGGACGCCAGGCTTCTGAACAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGATGTTCTCTGTCCACTaGCTATGGCTCTTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRMFSVH*LWLLPL
Trigger: CAGGGGCAAGAGCCATAGCCAGTGGACAGAGAACAT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCCAAGAACATGGTGGTaGATGGGACCCAAACCCCAA +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRPRTWW*MGPKPQ
Trigger: TTGGGGTTTGGGTCCCATCCACCACCATGTTCTTGG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGACCAAAATGCTCCATaGTTCGTGGGAAAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRDQNAP*FVGKPG
Trigger: TCCTGGCTTTCCCACGAATCATGGAGCATTTTGGTC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp AGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTTTCTTAGGGCCTaGAGGGTTAATACACCTCTTCACCACTGGACTAGGAGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: RARLVQSPIGDFLRA*RVNTPLHHWTRSSR
Trigger: CCGGGAGCTCCTAGTCCAGTGGTGAAGAGGTGTATTAACCCTCAAGGCCCTAAGAAAATCCCCAATAGGGCTCTGCACAAGCCGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCTTGCCTCTGCCCACCACCACCAGCAGGAAAGATAGGCCAGCTTGAAGGCAAAGAGCTTCTGGATAGCTaGACACAGGGAGGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: PCLCPPPPAGKIGQLEGKELLDS*TQGGSC
Trigger: ACAGGAACCTCCCTGTGTTCAGCTATCCAGAAGCTC...TTTGCCTTCAAGCTGGCCTATCTTTCCTGCTGGTGGTGGTGGGCAGAGGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAGGCTTTTGCTGTATTaGCTAGGCTGGAGTGCAGTA +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRRLLLY*LGWSAV
Trigger: TACTGCACTCCAGCCTAGGCAATACAGCAAAAGCCT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCCACTGAAGCCAGACTaGCTCTCTAGATTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDPLKPD*LSRFLL
Trigger: GAGGAGGAATCTAGAGAGGCAGTCTGGCTTCAGTGG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTCGCCCAGGGAGGGCATaGAAGCTCTGTGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: AKADLSFQGFLESDCQSSRPGRA*KLCAPS
Trigger: GGAAGGGGCACAGAGCTTCCATGCCCTCCCTGGGCG...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp GCAGTGCTGTTCAGAAGCCTGGCGTCCCTACACCAGCGGAGGCAGGAGAGGTCGCTGAGGGAGCAGGTGTaGATTAGAAAGAATAAGAAG +
Preference number: 2 (lower is better)
Translates to: AVLFRSLASLHQRRQERSLREQV*IRKNKK
Trigger: CTTCTTATTCTTTCTAATCCACACCTGCTCCCTCAG...CGACCTCTCCTGCCTCCGCTGGTGTAGGGACGCCAGGCTTCTGAACAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp CACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: HTERPFKDCREEFAAPHHHSSSL*GVRRAA
Trigger: TGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATG...ATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCACAGTGGTTGTCTGTaGGAATGTAGGCATTGCCTG +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDHSGCL*ECRHCL
Trigger: CAGGCAATGCCTACATTCTCACAGACAACCACTGTG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGTGGGAGTTGAACAATaGGAACATATGGGCACAGGG +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDVGVEQ*EHMGTG
Trigger: CCCTGTGCCCATATGTTCTCATTGTTCAACTCCCAC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp ACACCTGGAGCCTGGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTTCCCTCCGCCCTACCTACATGCTaGGTCTTTCCATTTTTATCG +
Preference number: 2 (lower is better)
Translates to: TPGAWCTEGLHVLPHLPSALPTC*VFPFLS
Trigger: CGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGC...GGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTACAAAACCAATGGCTaGAGCTTCAGCAGCCATTTT +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRYKTNG*SFSSHF
Trigger: AAAATGGCTGCTGAAGCTTCAGCCATTGGTTTTGTA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCATATCCAGCCAAACTaGGCTTCACAAGTGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDHIQPN*ASQVKE
Trigger: CTCCTTCACTTGTGAAGCTCAGTTTGGCTGGATATG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGCACCATGTTGCTTGTACACCTCTCCTGAGGTTCTCTaGATCACTGACTCCTCGTTC +
Preference number: 2 (lower is better)
Translates to: PESFPKAEQVPAPCCLYTSPEVL*ITDSSF
Trigger: GAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAGA...GGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCTGATGGCCACCAAGTaGAGAGGAAAGAAGACTAGA +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDLMATK*RGKKTR
Trigger: TCTAGTCTTCTTTCCTCTGCACTTGGTGGCCATCAG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GTGTGGAATATCCCAAATGGAGTAGAAACGCTGGGCTTCAGAGGCAGACCCTGCCCAGGCTGGATGAAGTaGAGTGGTGCAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: VWNIPNGVETLGFRGRPCPGWMK*SGAISA
Trigger: AGCTGAGATTGCACCACTGCACTTCATCCAGCCTGG...GCAGGGTCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp GTCTTTGACTTCTCCACTCCAGCATGGATTGCATTTTGCTGCTCCCCCACAATAGGTGGAGAGTGGGGATaGTCCCTGAGCCCCAAGCAA +
Preference number: 2 (lower is better)
Translates to: VFDFSTPAWIAFCCSPTIGGEWG*SLSPKQ
Trigger: TTGCTTGGGGCTCAGGGAGCATCCCCACTCTCCACC...TATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR GCA 90 bp TTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTCCATGGAGAAGCTGGGGGCCTCTaGGCCAAGCAAGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: LTWCIILAEQACVFFFHGEAGGL*AKQGTG
Trigger: GCCTGTGCCTTGCTTGGCGCAGAGGCCCCCAGCTTC...TCCATGGAAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGGTGACTTTCAACTTTaGATTCTTCCTTCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRGDFQL*ILPSCL
Trigger: GAGACAGGAAGGAAGAATCCAAAGTTGAAAGTCACC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTCCCCAATGAAACACTaGCAAAAGAAATGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRSPMKH*QKKCSS
Trigger: ACTGCTGCATTTCTTTTGCCAGTGTTTCATTGGGGA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp TCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATaGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: SGSLPNSVSDPHSSS*WGVRRAAIRDQWSS
Trigger: TGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCAAAGACTTCATGACTaGAACACCAAAAGCAATGTC +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRQRLHD*NTKSNV
Trigger: GACATTGCTTTTGGTGTTTCAGTCATGAAGTCTTTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAGATCTTGTGGAGGATaGCAACTTCCCACAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDRSCGG*QLPTEK
Trigger: TTTCTCTGTGGGAAGTTGTCATCCTCCACAAGATCT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTCCAGGATTCAGATaGCTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PAKADLSFQGFLESDCQSSPGFR*LSCLSL
Trigger: GAGGCTGAGGCAGGAGAGTCATCTGAATCCTGGAGA...GCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp AGTTCACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCAGAGGGCAACTTGTTTTaGCAAACACTGAGGGCAATC +
Preference number: 2 (lower is better)
Translates to: SSHREALQRLQRGVRSTPEGNLF*QTLRAI
Trigger: GATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCCTC...TGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGGCAAAAGCAATAACTaGAAATGCTCATTTCCATGG +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRGKSNN*KCSFPW
Trigger: CCATGGAAATGAGCATTTGCAGTTATTGCTTTTGCC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GACTTCTCCACTCCAGCATGGATTGCATTTTGCTGCTCCCCCACAATACCATCCCAAGAACCTTCTCTGTaGCTAGCACTCTCCCTGTCG +
Preference number: 2 (lower is better)
Translates to: DFSTPAWIAFCCSPTIPSQEPSL*LALSLS
Trigger: CGACAGGGAGAGTGCTAGGCACAGAGAAGGTTCTTG...GGATGGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR GCA 90 bp TCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTATGTCCCGGGGGCCATTCTGGACCTTaGTTCTCTCATTCCCTTCTA +
Preference number: 2 (lower is better)
Translates to: SAGHSGLDSALNRCLCPGGHSGP*FSHSLL
Trigger: TAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCC...CCCGGGACATAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp GGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATAATGAAGGCTGGCCATTCTGGACCTTaGTTCTCTCATTCCCTTCTA +
Preference number: 2 (lower is better)
Translates to: GPSKTAERSSQHPTIMKAGHSGP*FSHSLL
Trigger: TAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCC...AGCCTTCATTATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp CACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATGTGTCACTGATCTGTTaGTGTCTCCTGTCTGAAGAA +
Preference number: 2 (lower is better)
Translates to: HTERPFKDCREEFAAPHHVSLIC*CLLSEE
Trigger: TTCTTCAGACAGGAGACAGCAACAGATCAGTGACAC...ATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCTTCTTAGAGATGCATaGGCTGAGTTAATAACCACA +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRLLRDA*AELITT
Trigger: TGTGGTTATTAACTCAGCCCATGCATCTCTAAGAAG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGCTCACAGGAGAAAGTaGGAAACATCTAAACATCTA +
Preference number: 2 (lower is better)
Translates to: ALASIWQVPLWDTASRSRAHRRK*ETSKHL
Trigger: TAGATGTTTAGATGTTTCCCACTTTCTCCTGTGAGC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGGAGAGTCCTCACACCTaGAGCCTGGTGCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: WRAIAKALTSSISNSLPVESPHT*SLVHRR
Trigger: CCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTC...CACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCGGCGCCGGCAGAAGCTaGGGGCCTCTGCGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIIGAGRS*GPLRQA
Trigger: TGCTTGGCGCAGAGGCCCCCAGCTTCTGCCGGCGCC...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CCA 90 bp CACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATTATTTCAGAGGTAGCTaGCAACTAAACCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: HTERPFKDCREEFAAPHHYFRGS*QLNPAA
Trigger: AGCAGCAGGGTTTAGTTGCCAGCTACCTCTGAAATA...ATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR CAA 90 bp TACGCTTTTCCCATGGTCTTCGCAATCCACAGACAAGGAGATCCCTaGGGTGCCTACACCACAAGGGCCCTGGATTTCAAGCACAAAACT +
Preference number: 2 (lower is better)
Translates to: YAFPMVFAIHRQGDP*GAYTTRALDFKHKT
Trigger: AGTTTTGTGCTTGAAATCCAGGGCCCTTGTGGTGTAGGCACCCAAGGGATCTCCTTGTCTGTGGATTGCGAAGACCATGGGAAAAGCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCATTTTCCCTTACTCTaGCCAGACACACAATTGCAT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDHFPLL*PDTQLH
Trigger: ATGCAATTGTGTGTCTGGTCAGAGTAAGGGAAAATG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTAGCTGTTACGAGAGAATaGGCTACTCTGCAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLAVTRE*ATLQCH
Trigger: GTGACACTGCAGAGTAGCTCATTCTCTCGTAACAGC...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp GCCAGGGTTCTTCCTAGCCCATTTGTGTTGAAACCATATAGAACTGCTTGTCTCGGCATGGAAGCTCTGTaGCCCTTCCCTGGTACCTTG +
Preference number: 2 (lower is better)
Translates to: ARVLPSPFVLKPYRTACLGMEAL*PFPGTL
Trigger: CAAGGTACCAGGGAAGGGGCACAGAGCTTCCATGCC...GAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp CCTCTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTCAGAAGGGCTGCATGTaGTTCCCCATCTTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PLEKGSDTIIAHGARVLPQKGCM*FPIFPP
Trigger: GGGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTG...AGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGTCAGTAGGCACGGCCTaGTGTGCCAAAACACAGGCC +
Preference number: 2 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWSVGTA*CAKTQA
Trigger: GGCCTGTGTTTTGGCACAGCAGGCCGTGCCTACTGA...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATATCGTTGTGAGGTTATaGAAGAAACAGAAACGCCAC +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDIVVRL*KKQKRH
Trigger: GTGGCGTTTCTGTTTCTTCCATAACCTCACAACGAT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp AGGATAAAGCTGGGGAAGAGGCTTGACATCAACTTAGTTCACACAGAGAGGCCCAACACAGGCCACAGTTaGGGCTGCTTATGGCATACC +
Preference number: 2 (lower is better)
Translates to: RIKLGKRLDINLVHTERPNTGHS*GCLWHT
Trigger: GGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTT...GGGCCTCTCTGTGTGAACTAAGTTGATGTCAAGCCTCTTCCCCAGCTTTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR TCA 90 bp CCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGCACCATGTTGCTTGTACACCCACATGAGGCTTGACTaGTGTGACAATTTGGTGATA +
Preference number: 2 (lower is better)
Translates to: PESFPKAEQVPAPCCLYTHMRLD*CDNLVI
Trigger: TATCACCAAATTGTCACATCAGTCAAGCCTCATGTG...GGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR TCA 90 bp CCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGCACCATGTTGCTTGTACACCGAGGTGCTACAACACTaGAAATGGGAAATTCACATG +
Preference number: 2 (lower is better)
Translates to: PESFPKAEQVPAPCCLYTEVLQH*KWEIHM
Trigger: CATGTGAATTTCCCATTTTCAGTGTTGTAGCACCTC...GGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTTCATTTTTCTCATTTaGGGGACACATACCCTCACT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDFIFLI*GTHTLT
Trigger: AGTGAGGGTATGTGTCCCTCAAATGAGAAAAATGAA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCCCAAACTTCCTTTTTaGCAAAGATTAACAGGACCA +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDPKLPF*QRLTGP
Trigger: TGGTCCTGTTAATCTTTGTCAAAAAGGAAGTTTGGG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp TTTGCCCTGAAGACTGGCTTCCAAAGATTCTTACTGTGCTTCATAGAAGATGACGAGGTTCCTGTAGAGTaGTGCGCCCAGGGAGGGCAT +
Preference number: 2 (lower is better)
Translates to: FALKTGFQRFLLCFIEDDEVPVE*CAQGGH
Trigger: ATGCCCTCCCTGGGCGCATCACTCTACAGGAACCTC...GTCATCTTCTATGAAGCACAGTAAGAATCTTTGGAAGCCAGTCTTCAGGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGCTGGTCTTGAATTCCTaGCTTCAAGTGATCCCCCTG +
Preference number: 2 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWLVLNS*LQVIPL
Trigger: CAGGGGGATCACTTGAAGTCAGGAATTCAAGACCAG...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTGCACAAATGGTGCTATaGGAGTCCTCACACCTGGAG +
Preference number: 2 (lower is better)
Translates to: AKADLSFQGFLESDCQSSAQMVL*ESSHLE
Trigger: CTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGC...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAAGCTGGAGGCATCATaGTACCTAACTTCAAACTAT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDKLEAS*YLTSNY
Trigger: ATAGTTTGAAGTTAGGTAGCATGATGCCTCCAGCTT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCTAATCCCACAGAAATaGAAACTACCGTCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDLIPQK*KLPSEN
Trigger: ATTCTCTGACGGTAGTTTGCATTTCTGTGGGATTAG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATATGCAAAGAAAAGGCTaGACAACACAACGCAAGTTT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDMQRKG*TTQRKF
Trigger: AAACTTGCGTTGTGTTGTGCAGCCTTTTCTTTGCAT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACCACACCAGGGCCTGTTaGGGAGTGGGGGACAAGGGG +
Preference number: 2 (lower is better)
Translates to: LISKCKRMKTITNSLSDHHTRAC*GVGDKG
Trigger: CCCCTTGTCCCCCACTCCCCAACAGGCCCTGGTGTG...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp AAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCACACCTGGAGCCTaGTGCACAGAAGGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KADLSFQGFLESDCQSSYLTPGA*CTEGLH
Trigger: ATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGTGAG...GTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp TTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCACAGGCGGTGGAGAGTaGGGATGCTCCCTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: FYNHLLSSLQGQAFISAITGGGE*GCSLSP
Trigger: GGGGCTCAGGGAGCATCCCCACTCTCCACCGCCTGT...GATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CCA 90 bp TCACTGATCTGTTGCTGTCTCCTGTCTGAAGAATCTGAGCATTCAGTAGGCACGCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: SLICCCLLSEESEHSVGTHSSSL*GVRRAA
Trigger: TGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATG...CGTGCCTACTGAATGCTCAGATTCTTCAGACAGGAGACAGCAACAGATCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR CAA 90 bp GTGTACCCTTCCCCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTaGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTC +
Preference number: 2 (lower is better)
Translates to: VYPSPAKADLSFQGF*ESDCQSSYLQHFQF
Trigger: GAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGGGGAAGGGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATATTTTTAGAAGAGACTaGCACCCAGCAGTTAAAAGT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDIFRRD*HPAVKS
Trigger: ACTTTTAACTGCTGGGTGTCAGTCTCTTCTAAAAAT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp AAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTTCACCCCAGGCTGGATaGAGTGCAGTGGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: KGFWRAIAKALTSSISNSSPQAG*SAVVQS
Trigger: AGATTGCACCACTGCACTTCATCCAGCCTGGGGTGA...AGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp GTCTTTGACTTCTCCACTCCAGCATGGATTGCATTTTGCTGCTCCCCCACAATACTATGGATTCCGCGCTaGTTTTCACCTTGGTGTTGC +
Preference number: 2 (lower is better)
Translates to: VFDFSTPAWIAFCCSPTILWIPR*FSPWCC
Trigger: GCAACACCAAGGTGAAAATCAGCGCGGAATCCATAG...TATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR GCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCCCAGGTTTCTTCACTaGAAAGTTGGGGGTGGACCA +
Preference number: 2 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDPRFLH*KVGGGP
Trigger: TGGTCCACCCCCAACTTTGCAGTGAAGAAACCTGGG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGCTTCCCTCCCTCCATTaGAATAATCAAGCAGCCCTA +
Preference number: 2 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWLPSLH*NNQAAL
Trigger: TAGGGCTGCTTGATTATTGCAATGGAGGGAGGGAAG...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTAACTATGCAAAATGGATaGTTCCCACTCTGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLTMQNG*FPLCPV
Trigger: GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGT...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CCA 90 bp CTCCTGAGGTTCTCTGCATCACTGACTCCTCGTTCTTCAGGTCTCAGCTCAAATTCGATTGTGTCTGTTTaGTGTAAGGCGAGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LLRFSASLTPRSSGLSSNSIVSV*CKASSR
Trigger: TCTGGAGCTCGCCTTACACCAAACAGACACAATCGA...ATTTGAGCTGAGACCTGAAGAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGAAGGAGAGGCGTTTTaGAAGACTCTAAAATATAGT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDEGEAF*KTLKYS
Trigger: ACTATATTTTAGAGTCTTCCAAAACGCCTCTCCTTC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp AAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACTCTGTCACCCCAGGCTaGATGAAGTGCAGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: KADLSFQGFLESDCQSSYSVTPG*MKCSGA
Trigger: TGCACCACTGCACTTCATCCAGCCTGGGGTGACAGA...GTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 90 bp GTACTCAGCAGGGGTGTTTTCAAAGAAGGACGCAACAATCATAATTaGTCTCCCAGTGGATACTGGCAAGTAGTGTGGCACGAAGGAGGT +
Preference number: 2 (lower is better)
Translates to: VLSRGVFKEGRNNHN*SPSGYWQVVWHEGG
Trigger: ACCTCCTTCGTGCCACACTACTTGCCAGTATCCACTGGGAGACAAATTATGATTGTTGCGTCCTTCTTTGAAAACACCCCTGCTGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CTCCTGAGGTTCTCTGCATCACTGACTCCTCGTTCTTCAGGTCTCAGCTCAAATTTCTTAGGAAGCACATaGGGCTTGACTGATGTGACA +
Preference number: 2 (lower is better)
Translates to: LLRFSASLTPRSSGLSSNFLGST*GLTDVT
Trigger: TGTCACATCAGTCAAGCCTCATGTGCTTCCTAAGAA...ATTTGAGCTGAGACCTGAAGAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR TCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTCCTTTCCAAAAGCTaGGCAGGTGCCGGCACCATG +
Preference number: 2 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLEVLSKS*AGAGTM
Trigger: CATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGAC...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGGCGGCCACAGAGGATaGAGCAATGAGAGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYGGHRG*SNERSL
Trigger: GAGACTCCTCTCATTGCTTCATCCTCTGTGGCCGCC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCCAGCTTCATGTATCTTaGGGGCTGGCACAAGATATT +
Preference number: 2 (lower is better)
Translates to: PAKADLSFQGFLESDCQSQLHVS*GLAQDI
Trigger: AATATCTTGTGCCAGCCCTCAAGATACATGAAGCTG...GCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp AAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCCTTCCCTGGTACCTTaGCCTATGTGTCTCTTCGTC +
Preference number: 2 (lower is better)
Translates to: KADLSFQGFLESDCQSSYPSLVP*PMCLFV
Trigger: GACGAAGAGACACATAGGGCAAGGTACCAGGGAAGG...GTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp CTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTAGCGGCCGAATCCGTCGTTaGACAAATGGTGCTATGAGA +
Preference number: 2 (lower is better)
Translates to: LEKGSDTIIAHGARVLPSGRIRR*TNGAMR
Trigger: TCTCATAGCACCATTTGTGCAACGACGGATTCGGCC...GCTAGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTATGCTCAGCAATACTATaGAAAATGGATGCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLCSAIL*KMDASH
Trigger: GTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCA...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGAGGCACGGCCTGCTGTaGCAAAACACAGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQRHGLL*QNTGHS
Trigger: ACTGTGGCCTGTGTTTTGGCACAGCAGGCCGTGCCT...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTGTAACAGTTTTAGGTaGTTAATAGACGGACTTCTT +
Preference number: 2 (lower is better)
Translates to: KALAPPIRARLVQSPIGDCNSFR*LIDGLL
Trigger: AAGAAGTCCGTCTATTAACCACCTAAAACTGTTACA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGAGTTTGGAGAGCTTCTaGATAGCTGAACACAGGGAG +
Preference number: 2 (lower is better)
Translates to: WRAIAKALTSSISNSLPVSLESF*IAEHRE
Trigger: CTCCCTGTGTTCAGCTATCCAGAAGCTCTCCAAACT...CACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTAGCCTTTGAAAAAGTATaGCCATTCTGGACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLAFEKV*PFWTLL
Trigger: AAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGC...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 90 bp AAGAATGTGATGGGAAGCAAGTTTGTTTTGAGTGTGGGCAAGATCTaGTGGAGGATGACAACTTCCCACAGAGAAAGCATGCCACACCCA +
Preference number: 2 (lower is better)
Translates to: KNVMGSKFVLSVGKI*WRMTTSHRESMPHP
Trigger: TGGGTGTGGCATGCTTTCTCTGTGGGAAGTTGTCATCCTCCACAAGATCTTGCCCACACTCAAAACAAACTTGCTTCCCATCACATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp ATGGAAGAGATAGCTAATGTGTACCCTTCCCCAGCCAAAGCTGACTaGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTAC +
Preference number: 2 (lower is better)
Translates to: MEEIANVYPSPAKAD*SFQGFLESDCQSSY
Trigger: GTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGGGGAAGGGTACACATTAGCTATCTCTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACCAGGAAGTTCAGTCTaGGTGGAGCCCACTGCAGCG +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLPGSSV*VEPTAA
Trigger: CGCTGCAGTGGGCTCCACTCAGACTGAACTTCCTGG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTACCCAGCTTCCTGCGGTaGTGCACGAGGTCAGCAGAA +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVPSFLR*CTRSAE
Trigger: TTCTGCTGACCTCGTGCAGCACCGCAGGAAGCTGGG...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTGCAGCCCTACCTACATaGTGGGTCTTTCCATTTTTA +
Preference number: 2 (lower is better)
Translates to: AKADLSFQGFLESDCQSSAALPT*WVFPFL
Trigger: TAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGC...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp AAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCCGTCGTTGCACAAATaGTGCTATGAGAGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: KGFWRAIAKALTSSISNSPSLHK*CYESPH
Trigger: GTGAGGACTCTCATAGCACCATTTGTGCAACGACGG...AGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTGTGGAATATCCCAAATaGAGTAGAAACGCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: AKADLSFQGFLESDCQSSVEYPK*SRNAGL
Trigger: AAGCCCAGCGTTTCTACTCCATTTGGGATATTCCAC...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 90 bp ATTCTCACCTCACCTTTGGGAGGTAGGGATCATAGTTCCACTTCATaGATGAGGAAAACTGTAGTGCAGAGATGGCAAACACTGTCCAAG +
Preference number: 2 (lower is better)
Translates to: ILTSPLGGRDHSSTS*MRKTVVQRWQTLSK
Trigger: CTTGGACAGTGTTTGCCATCTCTGCACTACAGTTTTCCTCATCAATGAAGTGGAACTATGATCCCTACCTCCCAAAGGTGAGGTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp GCTGAGGTTTGGCAAGAACATACAGTGCATGTAGTGACCATGTCTTaGCTGAAAACCCTACTGGATACGCACAATGCAGAGTGCATTCTA +
Preference number: 2 (lower is better)
Translates to: AEVWQEHTVHVVTMS*LKTLLDTHNAECIL
Trigger: TAGAATGCACTCTGCATTGTGCGTATCCAGTAGGGTTTTCAGCAAAGACATGGTCACTACATGCACTGTATGTTCTTGCCAAACCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp TTCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 2 (lower is better)
Translates to: FLIVGSEKGGNKRPVVFKLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...TTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACACTGTAGTGCAGAGATaGCAAACACTGTCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDTVVQR*QTLSKN
Trigger: GTTCTTGGACAGTGTTTGCCATCTCTGCACTACAGT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGGCCTGAGGAAGGGCTaGCCAAGGTTTACAAGACTC +
Preference number: 2 (lower is better)
Translates to: LISKCKRMKTITNSLSDHGLRKG*PRFTRL
Trigger: GAGTCTTGTAAACCTTGGCCAGCCCTTCCTCAGGCC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CCTCTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTGTTTCCAAGGGTTTTTaGAGAGCGATTGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: PLEKGSDTIIAHGARVLPVSKGF*RAIAKA
Trigger: AGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAAC...AGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYHSSSL*GVRRAA
Trigger: TGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATG...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 90 bp CAAGGCCAGAATACAAAACCAATGGCTGAAGCTTCAGCAGCCATTTaGAGTCATGTTATGGTCTTAAAAATGGCGGCCACAGAGGATGAA +
Preference number: 2 (lower is better)
Translates to: QGQNTKPMAEASAAI*SHVMVLKMAATEDE
Trigger: TTCATCCTCTGTGGCCGCCATTTTTAAGACCATAACATGACTCAAAATGGCTGCTGAAGCTTCAGCCATTGGTTTTGTATTCTGGCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp ACTATTATTGCTCACGGTGCCAGGGTTCTTCCTAGCCCATTTGTGTaGAAACCATATAGAACTGCTTGTCTCTGCAGTTCCCAAGAACAA +
Preference number: 2 (lower is better)
Translates to: TIIAHGARVLPSPFV*KPYRTACLCSSQEQ
Trigger: TTGTTCTTGGGAACTGCAGAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGCACCGTGAGCAATAATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATTAGAGCCAGCCTCTTaGAACTGGCTGCCTCCCTTA +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHILEPAS*NWLPPL
Trigger: TAAGGGAGGCAGCCAGTTTCAAGAGGCTGGCTCTAA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp TTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTCCATGGACCGTCTTCGCCTTTCTaGGTCCAGTTAATTGTATTC +
Preference number: 2 (lower is better)
Translates to: LTWCIILAEQACVFFFHGPSSPF*VQLIVF
Trigger: GAATACAATTAACTGGACTCAGAAAGGCGAAGACGG...TCCATGGAAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR TCA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCTCACCTTGGTGTTGCTaGCAATTTGCAGGAACTCTT +
Preference number: 2 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVSPWCC*QFAGTL
Trigger: AAGAGTTCCTGCAAATTGTCAGCAACACCAAGGTGA...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR TCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGACTCTGCAGTGTCACTaGTCTGTTGCTGTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQTLQCH*SVAVSC
Trigger: ACAGGAGACAGCAACAGATCAGTGACACTGCAGAGT...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGTGACGGAAATGTTCTaGATTTTGATTGAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRVTEMF*ILIEAL
Trigger: CAAGGCCTCAATCAAAATGCAGAACATTTCCGTCAC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGCACAGTCTAGCCTCTaGAAGGAATGTCAGGCGGGT +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRAQSSL*KECQAG
Trigger: ACCCGCCTGACATTCCTTCCAGAGGCTAGACTGTGC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAGAATACAAAACCAATaGCTGAAGCTTCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDRIQNQ*LKLQQP
Trigger: TGGCTGCTGAAGCTTCAGCCATTGGTTTTGTATTCT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGAATTCTCTTCCTGTGTaGAATATCCCAAATGGAGTA +
Preference number: 2 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWNSLPV*NIPNGV
Trigger: TACTCCATTTGGGATATTCCACACAGGAAGAGAATT...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGCAATACTATGCAAAATaGATGCTTCCCACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWQYYAK*MLPTLS
Trigger: GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTG...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 90 bp ATCCACAACCTTTCTATGGATTCCGCGCTGATTTTCACCTTGGTGTaGCTGACAATTTGCAGGAACTCTTCTTCAGGATTTGGTGACTTT +
Preference number: 2 (lower is better)
Translates to: IHNLSMDSALIFTLV*LTICRNSSSGFGDF
Trigger: AAAGTCACCAAATCCTGAAGAAGAGTTCCTGCAAATTGTCAGCAACACCAAGGTGAAAATCAGCGCGGAATCCATAGAAAGGTTGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CAA 90 bp AATACCATCCACAACCTTTCTATGGATTCCGCGCTGATTTTCACCTaGGTGTTGCTGACAATTTGCAGGAACTCTTCTTCAGGATTTGGT +
Preference number: 2 (lower is better)
Translates to: NTIHNLSMDSALIFT*VLLTICRNSSSGFG
Trigger: ACCAAATCCTGAAGAAGAGTTCCTGCAAATTGTCAGCAACACCAAGGTGAAAATCAGCGCGGAATCCATAGAAAGGTTGTGGATGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGCTCTTCATAGCGCTTaGGTGGAAAGCAAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLALHSA*VESKSS
Trigger: GGAGCTCTTGCTTTCCACTCAAGCGCTATGAAGAGC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACATCTTTATGGATTGCTaGGGTTGGAGATTGAAACAG +
Preference number: 2 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDIFMDC*GWRLKQ
Trigger: CTGTTTCAATCTCCAACCTCAGCAATCCATAAAGAT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATGCCAGGGCCACTTCTaGGGAGAGCTATTGAATCTA +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHICQGHF*GELLNL
Trigger: TAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAACTGGATACGCACAATaGAGAGTGCATTCTATAAGA +
Preference number: 2 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRTGYAQ*RVHSIR
Trigger: TCTTATAGAATGCACTCTGCATTGTGCGTATCCAGT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATCTCCCAGGTTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTCCAACCTGGGAGA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCTTCTTTCCAGTTTaGAAGGACAGGCATTTATCT +
Preference number: 2 (lower is better)
Translates to: ASSNWKNRVCSPRACIVHIFFPV*KDRHLS
Trigger: AGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGAT...ATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
3UTR-3UTR GCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATGCAACTAAACCCTGCTaGTGTTACGAGAGAATGAGC +
Preference number: 2 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYATKPC*CYERMS
Trigger: GCTCATTCTCTCGTAACAGCAGCAGGGTTTAGTTGC...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTGCGAGCTCCAGAGCCTaGCACATTATAGAAGTTCAA +
Preference number: 2 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLASSRA*HIIEVQ
Trigger: TTGAACTTCTATAATGTGCCAGGCTCTGGAGCTCGC...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATCACAGGGTCTACCTTaGTGGCTGATAACCACAGGT +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHISQGLP*WLITTG
Trigger: ACCTGTGGTTATCAGCCACCAAGGTAGACCCTGTGA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATCTGTCCACTGGCTATaGCTCTTGCCCCTGTGTACA +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVSVHWL*LLPLCT
Trigger: TGTACACAGGGGCAAGAGCCATAGCCAGTGGACAGA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGAACATGGTGGTGGATaGGACCCAAACCCCAACTTT +
Preference number: 2 (lower is better)
Translates to: LISKCKRMKTITNSLSDHEHGGG*DPNPNF
Trigger: AAAGTTGGGGTTTGGGTCCCATCCACCACCATGTTC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp GACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTaGCAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTG +
Preference number: 2 (lower is better)
Translates to: DLASLIPFYNHLLSS*QGQAFISAIWNLNL
Trigger: CAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGCAGGTCTATGTTTGTaGTTTCTGTCCCACAAGCCC +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRAGLCL*FLSHKP
Trigger: GGGCTTGTGGGACAGAAATCACAAACATAGACCTGC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGCTGAGGTTGGAGATTaGAACAGTTATAACTTCATA +
Preference number: 2 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDAEVGD*NSYNFI
Trigger: TATGAAGTTATAACTGTTTCAATCTCCAACCTCAGC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAATAGACGACGAACTTaGTTCAGAGAGAGACAAAAA +
Preference number: 2 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDNRRRT*FRERQK
Trigger: TTTTTGTCTCTCTCTGAATCAAGTTCGTCGTCTATT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAACTGGCTATGGCTCTTaGCCCTGTGTACAGATACAG +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLTGYGS*PCVQIQ
Trigger: CTGTATCTGTACACAGGGGCAAGAGCCATAGCCAGT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAAGCAATAACTGCAAATaGTCATTTCCATGGAACAGT +
Preference number: 2 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRSNNCK*SFPWNS
Trigger: ACTGTTCCATGGAAATGAGCATTTGCAGTTATTGCT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAATGCTCCATGATTCGTaGGAAAGCCAGGAAGCACAG +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLMLHDS*ESQEAQ
Trigger: CTGTGCTTCCTGGCTTTCCCACGAATCATGGAGCAT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGCAGCCTCTAATTCCTaGGCTCAAGTAATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHIAASNS*AQVIFP
Trigger: AGGGAAGATTACTTGAGCCCAGGAATTAGAGGCTGC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATAACAATGAGAACATATaGGCACAGGGAGGGGAACAT +
Preference number: 2 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYNNENI*AQGGEH
Trigger: ATGTTCCCCTCCCTGTGCCCATATGTTCTCATTGTT...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGATGTATCTTGAGGGCTaGCACAAGATATTTTATAAG +
Preference number: 2 (lower is better)
Translates to: WRAIAKALTSSISNSLPVMYLEG*HKIFYK
Trigger: CTTATAAAATATCTTGTGCCAGCCCTCAAGATACAT...CACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAACAGTCAGCAGTGCTaGCTTAACATCTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCNSQQC*LNISTA
Trigger: TGCTGTGGAGATGTTAAGTCAGCACTGCTGACTGTT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATGCATATGGAGAAGCTaGGGTTTGGCAAGAACATAC +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHICIWRS*GLARTY
Trigger: GTATGTTCTTGCCAAACCTCAGCTTCTCCATATGCA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACCAAACCCCAACTTTTaGTCCCATGTTCTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRPNPNF*SHVLCP
Trigger: TGGACAGAGAACATGGGAGCAAAAGTTGGGGTTTGG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGCTTCATCCCTGGGATaGAAGGCTGTTTCAACATAT +
Preference number: 2 (lower is better)
Translates to: LISKCKRMKTITNSLSDHASSLG*KAVSTY
Trigger: ATATGTTGAAACAGCCTTGCATCCCAGGGATGAAGC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp TCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGAGAACTATGCAAAATGGATaGTTCCCACTCTGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: SGSLKSPPPFRRHVKLKRTMQNG*FPLCPV
Trigger: GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGT...TCTCTTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATTCATAGCGCTTGAGTaGAAAGCAAGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLFIALE*KARAPD
Trigger: GTCTGGAGCTCTTGCTTTCCACTCAAGCGCTATGAA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGACTCAGTGCTAAGGTaGCTCCAAGAGGAAAAACAC +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRDSVLR*LQEEKH
Trigger: GTGTTTTTCCTCTTGGAGCCACCTTAGCACTGAGTC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATTGCAGCAAACCACCATaGCACATGTATACCTATGTA +
Preference number: 2 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYCSKPP*HMYTYV
Trigger: TACATAGGTATACATGTGCCATGGTGGTTTGCTGCA...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTTATTTAAAAATTAACTaGGGTTCTCCAGAGAGGGCC +
Preference number: 2 (lower is better)
Translates to: PTASCILRAGTRYFIRRCYLKIN*GSPERA
Trigger: GGCCCTCTCTGGAGAACCCCAGTTAATTTTTAAATA...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 90 bp GGACACATACCCTCACTTTATGTGGTAGGTGGAAGGCTAAGATACTaGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTTGAGA +
Preference number: 2 (lower is better)
Translates to: GHIPSLYVVGGRLRY*GIYTFRDFPKRCLR
Trigger: TCTCAAACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCCACCTACCACATAAAGTGAGGGTATGTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGTTCTGCATTTTGATTaGGGCCTTGGTTACATGGGT +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLVLHFD*GLGYMG
Trigger: ACCCATGTAACCAAGGCCTCAATCAAAATGCAGAAC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACACTGTGCAGTTATATaGAGAGTACTTTCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHIHCAVI*RVLSSV
Trigger: GACAGAGGAAAGTACTCTTCATATAACTGCACAGTG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAACTCCTGGCCTCAAGTaGTTCTTTCATCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRTPGLK*FFHLNF
Trigger: GAAGTTGAGATGAAAGAATCACTTGAGGCCAGGAGT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACACAAAGATACTCTTTaGGAAGAGCAACCCCAAGAC +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRHKDTL*EEQPQD
Trigger: GTCTTGGGGTTGCTCTTCTCAAAGAGTATCTTTGTG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAACAGAAACGCCACATTaGAAGGGCTCTCCATTCAAA +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLTETPH*KGSPFK
Trigger: TTTGAATGGAGAGCCCTTTCAATGTGGCGTTTCTGT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGTTCAGACTCTGCAGTaGCTACTAGAACTATGTACA +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHIVQTLQ*LLELCT
Trigger: TGTACATAGTTCTAGTAGGCACTGCAGAGTCTGAAC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGATTTCTCTGATGTGTaGTATTCCACAACCCAAGAC +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHIDFSDV*YSTTQD
Trigger: GTCTTGGGTTGTGGAATAGCACACATCAGAGAAATC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACCTCTTGAAACTGGCTaGCTCCCTTATTTAGGTCTA +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRPLETG*LPYLGL
Trigger: TAGACCTAAATAAGGGAGGCAGCCAGTTTCAAGAGG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCAAATACTCAAGATCTaGAAAGGAATTTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYQILKI*KGILGW
Trigger: CCACCCCAAAATTCCTTTGCAGATCTTGAGTATTTG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTGCAGAATAGTGGCTTaGATTCCACCATCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCCRIVA*IPPSSR
Trigger: CCTTGAAGATGGTGGAATCCAAGCCACTATTCTGCA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGGAGAAGCTGAGGTTTaGCAAGAACATACAGTGCAT +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVGEAEV*QEHTVH
Trigger: ATGCACTGTATGTTCTTGCCAAACCTCAGCTTCTCC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAATGAGCCACTGTGTCTaGTCATCTGTTCCCTTTCTA +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVMSHCV*SSVPFL
Trigger: TAGAAAGGGAACAGATGACCAGACACAGTGGCTCAT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGCCAGAGAGAAAAGTTaGGTTACCTACAAAGGGAAG +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLAREKS*VTYKGK
Trigger: CTTCCCTTTGTAGGTAACCCAACTTTTCTCTCTGGC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGAGAGCCTTTGAAAAAGTATaGCCATTCTGGACCTTGCTT +
Preference number: 2 (lower is better)
Translates to: SGSLKSPPPFRRHVKLKRAFEKV*PFWTLL
Trigger: AAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGC...TCTCTTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 90 bp TGCAAATGCTCATTTCCATGGAACAGTAACTGTGACAGTACTTCATaGGAATTACCCAGATTAACGGGTAATTGCCAAGTATTACTGTAC +
Preference number: 2 (lower is better)
Translates to: CKCSFPWNSNCDSTS*ELPRLTGNCQVLLY
Trigger: GTACAGTAATACTTGGCAATTACCCGTTAATCTGGGTAATTCCAATGAAGTACTGTCACAGTTACTGTTCCATGGAAATGAGCATTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATAAATGTTCTGCATTTTaGTTGAGGCCTTGGTTACAT +
Preference number: 2 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYKCSAF*LRPWLH
Trigger: ATGTAACCAAGGCCTCAATCAAAATGCAGAACATTT...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAATGAGCTTGGAGGAATaGAGGCAAACTTTGTCACAT +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLMSLEE*RQTLSH
Trigger: ATGTGACAAAGTTTGCCTTCATTCCTCCAAGCTCAT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGATGGCTTTGAAACATaGCCAGAAGCTCAAATAAAG +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHIDGFET*PEAQIK
Trigger: CTTTATTTGAGCTTCTGGTCATGTTTCAAAGCCATC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATGGGCAAAGACTTCATaGCTGAAACACCAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLWAKTS*LKHQKQ
Trigger: TTGCTTTTGGTGTTTCAGTCATGAAGTCTTTGCCCA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATCTCTCAGACCACAGTaGAATCAAGTTAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLSLRPQ*NQVRTQ
Trigger: CTGAGTTCTAACTTGATTGCACTGTGGTCTGAGAGA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAGAGAGAAGAGGAGGTaGCAGATCAATCTAACTTGT +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRREKRR*QINLTC
Trigger: ACAAGTTAGATTGATCTGCCACCTCCTCTTCTCTCT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAACTTTATGTGGTAGGTaGAAGGCTAAGATACTTGGG +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRTLCGR*KAKILG
Trigger: CCCAAGTATCTTAGCCTTCCACCTACCACATAAAGT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATTGTGGATGACAGTGTaGCAATTCCTCAAGGATCTA +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRLWMTV*QFLKDL
Trigger: TAGATCCTTGAGGAATTGCCACACTGTCATCCACAA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCTTTATCTCAGCCATCTaGAACCTTAACTTGGTGCAT +
Preference number: 2 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIIFISAI*NLNLVH
Trigger: ATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAA...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CAA 90 bp AGAGTGTTCAATTTCAAGAGACTCAATTCCAAAATTTATGTGCCTTaGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTT +
Preference number: 2 (lower is better)
Translates to: RVFNFKRLNSKIYVP*KKYGHSGPCFSHSL
Trigger: AAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTTGAAATTGAACACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATTCCTAAGAGATGTTTaGGATTTCTCTGATGTGTGC +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLFLRDV*DFSDVC
Trigger: GCACACATCAGAGAAATCTCAAACATCTCTTAGGAA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAGATCAGAACAGAACTaGAAGAGATACGAAAAACCC +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLRSEQN*KRYEKP
Trigger: GGGTTTTTCGTATCTCTTTCAGTTCTGTTCTGATCT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATGCAAGCTAAGGGATaGATTCATTTTCCCTTACTC +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRMQAKG*IHFPLL
Trigger: GAGTAAGGGAAAATGAATGCATCCCTTAGCTTGCAT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAACCAGTACCAGCCACTaGAAAAACATTCCAAAATGT +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRTSTSH*KNIPKC
Trigger: ACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATATTCACAACTTTCTaGCCTATAGGGAGCTTCACT +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRIFTTF*PIGSFT
Trigger: AGTGAAGCTCCCTATAGGCCAGAAAGTTGTGAATAT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGAAGCTAAAGAGCAGTaGATGTCCTATCTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTREAKEQ*MSYLQF
Trigger: AAACTGAAGATAGGACATCCACTGCTCTTTAGCTTC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAGGCAACCTACAGAATaGGAGAAAATTTTTGCAACC +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLRQPTE*EKIFAT
Trigger: GGTTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGTGCTATTAATACTCTaGCCTTCTGGTAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLVLLIL*PSGRIC
Trigger: ACAGATTCTACCAGAAGGCCAGAGTATTAATAGCAC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp AATCATAGAGAATATTGGCAAATACTCAAGATCTGCAAAGGAATTTaGGGGTGGATTTATTCACCACTGTCTCATGTGTATAATCTGCCT +
Preference number: 2 (lower is better)
Translates to: NHREYWQILKICKGI*GWIYSPLSHVYNLP
Trigger: AGGCAGATTATACACATGAGACAGTGGTGAATAAATCCACCCCAAAATTCCTTTGCAGATCTTGAGTATTTGCCAATATTCTCTATGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp AATGTGGCAGATTTAGTTTCTGTCCATGAATATGAAGATTCTTTGTaGAGTCTTACTGTTGAATGTGTCTGGCTAAGTTTTTGTCTCCCA +
Preference number: 2 (lower is better)
Translates to: NVADLVSVHEYEDSL*SLTVECVWLSFCLP
Trigger: TGGGAGACAAAAACTTAGCCAGACACATTCAACAGTAAGACTCAACAAAGAATCTTCATATTCATGGACAGAAACTAAATCTGCCACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTATAATACAAAGGCTGTaGCCAAAATGCTCCATGATT +
Preference number: 2 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCIIQRL*PKCSMI
Trigger: AATCATGGAGCATTTTGGTCACAGCCTTTGTATTAT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAGAAAAGTTCCTGACTaGAGGTCTATGTTTGTGATT +
Preference number: 2 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCRKVPD*RSMFVI
Trigger: AATCACAAACATAGACCTGCAGTCAGGAACTTTTCT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR GCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACAGATTAACGGGTAATTaGCAAGTATTACTGTACAAC +
Preference number: 2 (lower is better)
Translates to: LISKCKRMKTITNSLSDHRLTGN*QVLLYN
Trigger: GTTGTACAGTAATACTTGGCAATTACCCGTTAATCT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGCCATAATATCGTTCTaGGTTTTAAGAAGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVAIISF*VLRSQE
Trigger: TTCCTGACTTCTTAAAACCCAGAACGATATTATGGC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGAGGCCTTGGTTACATaGGTATGTACATTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: QYEEAKNLDKRLEELLTREALVT*VCTFFK
Trigger: TTTGAAAAATGTACATACCCATGTAACCAAGGCCTC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGTTTGTGGGTACCAATaGATTAAAGGGGTAAAATCT +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVVCGYQ*IKGVKS
Trigger: AGATTTTACCCCTTTAATCCATTGGTACCCACAAAC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATTAGGACAATCTTTATaGATTGCTGAGGTTGGAGAT +
Preference number: 2 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVLGQSL*IAEVGD
Trigger: ATCTCCAACCTCAGCAATCCATAAAGATTGTCCTAA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACTTGTTTCTGATGAGTaGCAAATATCCAGAATGTTA +
Preference number: 2 (lower is better)
Translates to: PTQMPINVRTDKENVAHILVSDE*QISRML
Trigger: TAACATTCTGGATATTTGCCACTCATCAGAAACAAG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAAATGCTCATTTCCATaGAACAGTAACTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLKCSFP*NSNCDS
Trigger: ACTGTCACAGTTACTGTTCCATGGAAATGAGCATTT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp AGTACTTTCCTCTGTCAGTTCACTTTTGGGCATAATATCCTTAAGTaGTGGCCTATTTATCACAAATATTTCAACATGGTTCTTAGACAC +
Preference number: 2 (lower is better)
Translates to: STFLCQFTFGHNILK*WPIYHKYFNMVLRH
Trigger: GTGTCTAAGAACCATGTTGAAATATTTGTGATAAATAGGCCACAACTTAAGGATATTATGCCCAAAAGTGAACTGACAGAGGAAAGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp ACCCAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATaGCTAACTAGAATAACCAGTTTAGAGAATAACCAGTTTAGAGAA +
Preference number: 2 (lower is better)
Translates to: TQYEEAKNLDKRLEE*LTRITSLENNQFRE
Trigger: TTCTCTAAACTGGTTATTCTCTAAACTGGTTATTCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 90 bp AGAAATGTGGCAGATTTAGTTTCTGTCCATGAATATGAAGATTCTTaGTTGAGTCTTACTGTTGAATGTGTCTGGCTAAGTTTTTGTCTC +
Preference number: 2 (lower is better)
Translates to: RNVADLVSVHEYEDS*LSLTVECVWLSFCL
Trigger: GAGACAAAAACTTAGCCAGACACATTCAACAGTAAGACTCAACAAAGAATCTTCATATTCATGGACAGAAACTAAATCTGCCACATTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAACTAAGGAGCTTCTGTaGAGCAAAAGAAACTATTAT +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLTKELL*SKRNYY
Trigger: ATAATAGTTTCTTTTGCTGCACAGAAGCTCCTTAGT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAAAGCTAAGATCCACTaGATTGAAATTCTTACTTCC +
Preference number: 2 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLKAKIH*IEILTS
Trigger: GGAAGTAAGAATTTCAATCCAGTGGATCTTAGCTTT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GTGGGTGCAGCCCACGGAGGGCAAGCAGAAGCAGGGTaGGGCATTGCCTCACCTGGGAAGTGCAAGGGGTTG +
Preference number: 3 (lower is better)
Translates to: VGAAHGGQAEAG*GIASPGKCKGL
Trigger: CAACCCCTTGCACTTCCCAGGTGAGGCAATGCCCCACCCTGCTTCTGCTTGCCCTCCGTGGGCTGCACCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CTCCCTCCCCTAGCCAAGGGAAGCCATGAGGGACCATaGCGTGAGTGGGGGTGCACTCCGGTCCAGATACTA +
Preference number: 3 (lower is better)
Translates to: LPPLAKGSHEGP*REWGCTPVQIL
Trigger: TAGTATCTGGACCGGAGTGCACCCCCACTCACGGCATGGTCCCTCATGGCTTCCCTTGGCTAGGGGAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CTCGGTTCATCTCACTGGGACTGGTTAGACAGTGGGTaGAGCCCACGGAGGGCAAGCAGAAGCAGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: LGSSHWDWLDSG*SPRRASRSRVG
Trigger: CCCCACCCTGCTTCTGCTTGCCCTCCGTGGGCTGCACCCACTGTCTAACCAGTCCCAGTGAGATGAACCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp TGCGCCAAGCAAGGCACAGGCGGTGGAGAGTGGGGATaGTCCCTGAGCCCCAAGCAACAGCCTGGTAAGGAA +
Preference number: 3 (lower is better)
Translates to: CAKQGTGGGEWG*SLSPKQQPGKE
Trigger: TTCCTTACCAGGCTGTTGCTTGGGGCTCAGGGAGCATCCCCACTCTCCACCGCCTGTGCCTTGCTTGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR GCA 72 bp GCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTaGTTATGTCCCGGGGGTGGTTGGGGCTGTGCTACC +
Preference number: 3 (lower is better)
Translates to: AGHSGLDSALNR*LCPGGGWGCAT
Trigger: GGTAGCACAGCCCCAACCACCCCCGGGACATAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CCA 72 bp GATTCGTGGGAAAGCCAGGAAGCACAGTCTAGCCTCTaGAAGGAATGTCAGGCGGGTCGGATCCACCGAGGC +
Preference number: 3 (lower is better)
Translates to: DSWESQEAQSSL*KECQAGRIHRG
Trigger: GCCTCGGTGGATCCGACCCGCCTGACATTCCTTCCAGAGGCTAGACTGTGCTTCCTGGCTTTCCCACGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp CTAGCCAAGGGAAGCCATGAGGGACCATGCCGTGAGTaGGGGTGCACTCCGGTCCAGATACTACGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: LAKGSHEGPCRE*GCTPVQILRFS
Trigger: GGAAAAGCGTAGTATCTGGACCGGAGTGCACCCCCACTCACGGCATGGTCCCTCATGGCTTCCCTTGGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GGTACTCGGTTCATCTCACTGGGACTGGTTAGACAGTaGGTGCAGCCCACGGAGGGCAAGCAGAAGCAGGGT +
Preference number: 3 (lower is better)
Translates to: GTRFISLGLVRQ*VQPTEGKQKQG
Trigger: ACCCTGCTTCTGCTTGCCCTCCGTGGGCTGCACCCACTGTCTAACCAGTCCCAGTGAGATGAACCGAGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCACTGGCTATGGCTCTaGCCCCTGTGTACAGATACA +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRHWLWL*PLCTDT
Trigger: TGTATCTGTACACAGGGGCAAGAGCCATAGCCAGTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCAGGCTTTTGCTGTATaGCCTAGGCTGGAGTGCAGT +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRQAFAV*PRLECS
Trigger: ACTGCACTCCAGCCTAGGCAATACAGCAAAAGCCTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp AAAGCTGCCAGGAAGTTCAGTCTGAGTGGAGCCCACTaGAGCGCTGCAAAGCCACTGAAGCCAGACTGCCTC +
Preference number: 3 (lower is better)
Translates to: KAARKFSLSGAH*SAAKPLKPDCL
Trigger: GAGGCAGTCTGGCTTCAGTGGCTTTGCAGCGCTGCAGTGGGCTCCACTCAGACTGAACTTCCTGGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp AACAGGGGTCGACAGACACTTCATACAGGAGAGCTCTaGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAG +
Preference number: 3 (lower is better)
Translates to: NRGRQTLHTGEL*LASGRCPSGTQ
Trigger: CTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGCTCTCCTGTATGAAGTGTCTGTCGACCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAGGAGGCAGCAATCTTaGCTGTTCTGCAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDRRQQS*LFCSLC
Trigger: GCAGAGGCTGCAGAACAGCAAAGATTGCTGCCTCCT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp AGAGGGCCCCACCGCATACCCTGGGGGAAGGAATGCTaGCCTTGCGAAGCTTCCATTAAAGCCCAAGAGGAT +
Preference number: 3 (lower is better)
Translates to: RGPHRIPWGKEC*PCEASIKAQED
Trigger: ATCCTCTTGGGCTTTAATGGAAGCTTCGCAAGGTCAGCATTCCTTCCCCCAGGGTATGCGGTGGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 72 bp CCACCAGCAGGAAAGATAGGCCAGCTTGAAGGCAAATaGGGAGAGCAGTGCTGTTCAGAAGCCTGGCGTCCC +
Preference number: 3 (lower is better)
Translates to: PPAGKIGQLEGK*GEQCCSEAWRP
Trigger: GGGACGCCAGGCTTCTGAACAGCACTGCTCTCCTCATTTGCCTTCAAGCTGGCCTATCTTTCCTGCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTTTTTGAGACAAGGTTaGGCTCCATCTCCCAGGTTG +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRFLRQG*APSPRL
Trigger: CAACCTGGGAGATGGAGCCAAACCTTGTCTCAAAAA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTaGTATGAGAGTCCTCACACCTGGAGCCTGGTGCAC +
Preference number: 3 (lower is better)
Translates to: LVSRPNPSLHKW*YESPHTWSLVH
Trigger: GTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR GCA 72 bp CTGTCTGAAGAATCTGAGCATTCAGTAGGCACGGCCTaGTGTGCCAAAACACAGGCCACAGTTGGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: LSEESEHSVGTA*CAKTQATVGAA
Trigger: AGCAGCCCCAACTGTGGCCTGTGTTTTGGCACAGCAGGCCGTGCCTACTGAATGCTCAGATTCTTCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR CCA 72 bp ACAGACACTTCATACAGGAGAGCTCTGGCTAGCATCTaGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGT +
Preference number: 3 (lower is better)
Translates to: TDTSYRRALASI*QVPLWDTASRS
Trigger: ACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGCTCTCCTGTATGAAGTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GCTCTGAAGAGAGCAGCAGATCTCCTAGCACAGCACTaGAGCTCCGCTAAGGGACAGACTGCTTCCACAAGT +
Preference number: 3 (lower is better)
Translates to: ALKRAADLLAQH*SSAKGQTASTS
Trigger: ACTTGTGGAAGCAGTCTGTCCCTTAGCGGAGCTCCAGTGCTGTGCTAGGAGATCTGCTGCTCTCTTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp CAGTGTAAACAAAGCTGCCAGGAAGTTCAGTCTGAGTaGAGCCCACTGCAGCGCTGCAAAGCCACTGAAGCC +
Preference number: 3 (lower is better)
Translates to: QCKQSCQEVQSE*SPLQRCKATEA
Trigger: GGCTTCAGTGGCTTTGCAGCGCTGCAGTGGGCTCCACTCAGACTGAACTTCCTGGCAGCTTTGTTTACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp TCGTTGCACAAATGGTGCTATGAGAGTCCTCACACCTaGAGCCTGGTGCACAGAAGGGCTGCATGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SLHKWCYESPHT*SLVHRRAACAS
Trigger: GGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCAAGACAAGGGTGGCTaGTCTCACCACTCCTATTCA +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDQDKGG*SHHSYS
Trigger: TGAATAGGAGTGGTGAGACAAGCCACCCTTGTCTTG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAGTGTGGGCAAGATCTaGTGGAGGATGACAACTTCC +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDSVGKI*WRMTTS
Trigger: GGAAGTTGTCATCCTCCACAAGATCTTGCCCACACT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp CCCAAGAGGATGGAGTTTGGAGAGCTTCTGGATAGCTaGACACAGGGAGGTTCCTGTAGAGTGATGCGCCCA +
Preference number: 3 (lower is better)
Translates to: PKRMEFGELLDS*TQGGSCRVMRP
Trigger: TGGGCGCATCACTCTACAGGAACCTCCCTGTGTTCAGCTATCCAGAAGCTCTCCAAACTCCATCCTCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp GCTATGGCTCTTGCCCCTGTGTACAGATACAGGCTCTaGACAAGTTCACCAAATCCCTTAGGCTTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: AMALAPVYRYRL*TSSPNPLGFSP
Trigger: GGGGCTGAAGCCTAAGGGATTTGGTGAACTTGTCCAGAGCCTGTATCTGTACACAGGGGCAAGAGCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp ACAAATGGTGCTATGAGAGTCCTCACACCTGGAGCCTaGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTT +
Preference number: 3 (lower is better)
Translates to: TNGAMRVLTPGA*CTEGLHVLPHL
Trigger: AAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp AACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATaGTGCTATGAGAGTCCTCACACCTGGAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: NLVSRPNPSLHK*CYESPHTWSLV
Trigger: CACCAGGCTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp CCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGG +
Preference number: 3 (lower is better)
Translates to: PNSVSDPHSSSL*GVRRAAIRDQW
Trigger: CCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAAAGAAAAGCTGATGTaGCTCACACGTGAATGTCTC +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRKEKLM*LTRECL
Trigger: GAGACATTCACGTGTGAGCAACATCAGCTTTTCTTT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAAATCATCAGGAGGCTaGTCTAGGGCATGTGGGATT +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDKSSGG*SRACGI
Trigger: AATCCCACATGCCCTAGACAAGCCTCCTGATGATTT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTACCACTCCAGCATGGATaGCATTTTGCTGCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLPLQHG*HFAAPP
Trigger: TGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGG...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR TCA 72 bp GAGCATGACGTCTCTCTTGCTTCCACTCTTGCTATGTaGTGTGCCTCCTCCCGCTTTGCCTTCCATCATGAG +
Preference number: 3 (lower is better)
Translates to: EHDVSLASTLAM*CASSRFAFHHE
Trigger: CTCATGATGGAAGGCAAAGCGGGAGGAGGCACATCACATAGCAAGAGTGGAAGCAAGAGAGACGTCATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR GCA 72 bp GAACATGGTGGTGGATGGGACCCAAACCCCAACTTTTaGTCCCATGTTCTCTGTCCACTGGCTATGGCTCTT +
Preference number: 3 (lower is better)
Translates to: EHGGGWDPNPNF*SHVLCPLAMAL
Trigger: AAGAGCCATAGCCAGTGGACAGAGAACATGGGAGCAAAAGTTGGGGTTTGGGTCCCATCCACCACCATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp TTGAGACAAGGTTTGGCTCCATCTCCCAGGTTGGAGTaGAGTGGCATGATCTTGGCTAACTGCAACCTCCGT +
Preference number: 3 (lower is better)
Translates to: LRQGLAPSPRLE*SGMILANCNLR
Trigger: ACGGAGGTTGCAGTTAGCCAAGATCATGCCACTGCACTCCAACCTGGGAGATGGAGCCAAACCTTGTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp ACACAGCTTCCAGAAGTAGGAGGAGGCAGCAATCTTTaGTGTTCTGCAGCCTCTGCTGGTGATACCCATGCA +
Preference number: 3 (lower is better)
Translates to: TQLPEVGGGSNL*CSAASAGDTHA
Trigger: TGCATGGGTATCACCAGCAGAGGCTGCAGAACAGCAAAGATTGCTGCCTCCTCCTACTTCTGGAAGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp AGGGCATGGAAGCTCTGTGCCCCTTCCCTGGTACCTTaGCCTATGTGTCTCTTCGTCTTTGTCCTTTGTAAG +
Preference number: 3 (lower is better)
Translates to: RAWKLCAPSLVP*PMCLFVFVLCK
Trigger: CTTACAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAGAGCTTCCATGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp CCAACTTTTGCTCCCATGTTCTCTGTCCACTGGCTATaGCTCTTGCCCCTGTGTACAGATACAGGCTCTGGA +
Preference number: 3 (lower is better)
Translates to: PTFAPMFSVHWL*LLPLCTDTGSG
Trigger: TCCAGAGCCTGTATCTGTACACAGGGGCAAGAGCCATAGCCAGTGGACAGAGAACATGGGAGCAAAAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GACAAGACAAAAGCTAGGCAAAGACCCACTGGAAGGTaGCTTTCTGATGCTCAGACCCAAGCAGAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: DKTKARQRPTGR*LSDAQTQAEGR
Trigger: CCTTCCCTCTGCTTGGGTCTGAGCATCAGAAAGCCACCTTCCAGTGGGTCTTTGCCTAGCTTTTGTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGACAATCTTTATGGATaGCTGAGGTTGGAGATTGAA +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRDNLYG*LRLEIE
Trigger: TTCAATCTCCAACCTCAGCAATCCATAAAGATTGTC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTGTGACAGTACTTCATaGGAATTACCCAGATTAACG +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRCDSTS*ELPRLT
Trigger: CGTTAATCTGGGTAATTCCAATGAAGTACTGTCACA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGCCCTTCCCTGGTACCTaGCCCTATGTGTCTCTTCGT +
Preference number: 3 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWPFPGT*PYVSLR
Trigger: ACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGG...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp CAGCCATCTGGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCAGGGCCGGAGTCTGCTaGTCTTTGACTTCTCCACTC +
Preference number: 3 (lower is better)
Translates to: QPSGTLTWCIILAEQACVRAGVC*SLTSPL
Trigger: GAGTGGAGAAGTCAAAGACAAGCAGACTCCGGCCCT...GACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CAA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTAAAACACAGGCCACAGTaGGGGCTGCTTATGGCATAC +
Preference number: 3 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLKHRPQ*GLLMAY
Trigger: GTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTT...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCAGAATAGACCATATTaGGGGACACAATTCGTTTTA +
Preference number: 3 (lower is better)
Translates to: ALASIWQVPLWDTASRSRQNRPY*GTQFVL
Trigger: TAAAACGAATTGTGTCCCCAAATATGGTCTATTCTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAACACAACGCAAGTTTaGATGAAGGAACCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDNTTQV*MKEPES
Trigger: GCTTTCTGGTTCCTTCATCAAAACTTGCGTTGTGTT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCAGGCCGAATCCGTCGTaGCACAAATGGTGCTATGAG +
Preference number: 3 (lower is better)
Translates to: PAKADLSFQGFLESDCQSRPNPS*HKWCYE
Trigger: CTCATAGCACCATTTGTGCAACGACGGATTCGGCCT...GCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 72 bp CTACACCACAAGGGCCCTGGATTTCAAGCACAAAACTaGGTGGCCATTTGGGCAGACACTGAGCTAGCTGTA +
Preference number: 3 (lower is better)
Translates to: LHHKGPGFQAQN*VAIWADTELAV
Trigger: TACAGCTAGCTCAGTGTCTGCCCAAATGGCCACTCAGTTTTGTGCTTGAAATCCAGGGCCCTTGTGGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GAGATGGCAAACACTGTCCAAGAACATGGTGGTGGATaGGACCCAAACCCCAACTTTTGCTCCCATGTTCTC +
Preference number: 3 (lower is better)
Translates to: EMANTVQEHGGG*DPNPNFCSHVL
Trigger: GAGAACATGGGAGCAAAAGTTGGGGTTTGGGTCCCATCCACCACCATGTTCTTGGACAGTGTTTGCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp TGCAGAGATGGCAAACACTGTCCAAGAACATGGTGGTaGATGGGACCCAAACCCCAACTTTTGCTCCCATGT +
Preference number: 3 (lower is better)
Translates to: CRDGKHCPRTWW*MGPKPQLLLPC
Trigger: ACATGGGAGCAAAAGTTGGGGTTTGGGTCCCATCCACCACCATGTTCTTGGACAGTGTTTGCCATCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GAATGGGCAAAAACTGGAAGCACTCCCTTTGAAAACTaGCGCAAGACAAGGGTGGCTTGTCTCACCACTCCT +
Preference number: 3 (lower is better)
Translates to: EWAKTGSTPFEN*RKTRVACLTTP
Trigger: AGGAGTGGTGAGACAAGCCACCCTTGTCTTGCGCCAGTTTTCAAAGGGAGTGCTTCCAGTTTTTGCCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GACAGAAGAGGGTTGCAAATGGGCTCTCCTTCATCCTaGGATCGCTGGGGCTCTGAAACTGGAAGAAGAAAA +
Preference number: 3 (lower is better)
Translates to: DRRGLQMGSPSS*DRWGSETGRRK
Trigger: TTTTCTTCTTCCAGTTTCAGAGCCCCAGCGATCCCAGGATGAAGGAGAGCCCATTTGCAACCCTCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp AGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTaGAGAAGGTGTGCCCCAAGTGAATGTAAGACCTCC +
Preference number: 3 (lower is better)
Translates to: RRAAIRDQWSSN*RRCAPSECKTS
Trigger: GGAGGTCTTACATTCACTTGGGGCACACCTTCTCCAGTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGTCACAGGGTCTACCTaGGTGGCTGATAACCACAGG +
Preference number: 3 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDVTGST*VADNHR
Trigger: CCTGTGGTTATCAGCCACCAAGGTAGACCCTGTGAC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGAAATGTTCTGCATTTaGATTGAGGCCTTGGTTACA +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDEMFCI*IEALVT
Trigger: TGTAACCAAGGCCTCAATCAAAATGCAGAACATTTC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCATAGTTCCACTTCATaGATGAGGAAAACTGTAGTG +
Preference number: 3 (lower is better)
Translates to: KALAPPIRARLVQSPIGDHSSTS*MRKTVV
Trigger: CACTACAGTTTTCCTCATCAATGAAGTGGAACTATG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp CAGAGTTTGTTGTTTCTGTGGGCTCTTCATAGCGCTTaGGTGGAAAGCAAGAGCTCCAGACAGGGTACAGAG +
Preference number: 3 (lower is better)
Translates to: QSLLFLWALHSA*VESKSSRQGTE
Trigger: CTCTGTACCCTGTCTGGAGCTCTTGCTTTCCACTCAAGCGCTATGAAGAGCCCACAGAAACAACAAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp CTCACGGTGCCAGGGTTCTTCCTAGCCCATTTGTGTTaGAACCATATAGAACTGCTTGTCTCTGCAGTTCCC +
Preference number: 3 (lower is better)
Translates to: LTVPGFFLAHLC*NHIELLVSAVP
Trigger: GGGAACTGCAGAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGCACCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR GCA 72 bp TCCTTTCCAAAAGCTGAGCAGGTGCCGGCACCATGTTaGTTGTACACCTCTTTTCTCAGATTGGAAGGCATC +
Preference number: 3 (lower is better)
Translates to: SFPKAEQVPAPC*LYTSFLRLEGI
Trigger: GATGCCTTCCAATCTGAGAAAAGAGGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR GCA 72 bp ATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTaGACAAATGGTGCTATGAGAGTCCTCACACCTGGA +
Preference number: 3 (lower is better)
Translates to: ILKTLSVGRIRR*TNGAMRVLTPG
Trigger: TCCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp CGGCACCATGTTGCTTGTACACCTCTTTTCTCAGATTaGAAGGCATCTCCTGAGGTTCTCTGCATCACTGAC +
Preference number: 3 (lower is better)
Translates to: RHHVACTPLFSD*KASPEVLCITD
Trigger: GTCAGTGATGCAGAGAACCTCAGGAGATGCCTTCCAATCTGAGAAAAGAGGTGTACAAGCAACATGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR CCA 72 bp GTTTGTTGTTTCTGTGGGCTCTTCATAGCGCTTGAGTaGAAAGCAAGAGCTCCAGACAGGGTACAGAGGAGT +
Preference number: 3 (lower is better)
Translates to: VCCFCGLFIALE*KARAPDRVQRS
Trigger: ACTCCTCTGTACCCTGTCTGGAGCTCTTGCTTTCCACTCAAGCGCTATGAAGAGCCCACAGAAACAACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp ATGACTGCGGGGCCACCACATATCGTTGTGAGGTTATaGAAGAAACAGAAACGCCACATTGAAAGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: MTAGPPHIVVRL*KKQKRHIERAL
Trigger: GAGAGCCCTTTCAATGTGGCGTTTCTGTTTCTTCCATAACCTCACAACGATATGTGGTGGCCCCGCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACCCAAACCCCAACTTTaGCTCCCATGTTCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRPKPQL*LPCSLS
Trigger: GGACAGAGAACATGGGAGCAAAAGTTGGGGTTTGGG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GAAATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTCCAAGAGGATGGAGTTaGGAGAGCTTCTGGATAGCT +
Preference number: 3 (lower is better)
Translates to: EILKTLSVGRIRRCTNGAPRGWS*ESFWIA
Trigger: AGCTATCCAGAAGCTCTCCAAACTCCATCCTCTTGG...AGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGCCAGCCAAAGCTGACTaGAGTTTCCAAGGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWPAKAD*SFQGFL
Trigger: CAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGCATCTTCTTTCCAGTTaGCAAGGACAGGCATTTATC +
Preference number: 3 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLHLLSS*QGQAFI
Trigger: GATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR TCA 72 bp TGGATGTCCTATCTTCAGTTTTGCCAGGGCCACTTCTaGGGAGAGCTATTGAATCTAGAGCTGCACCATCTC +
Preference number: 3 (lower is better)
Translates to: WMSYLQFCQGHF*GELLNLELHHL
Trigger: GAGATGGTGCAGCTCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp CAACAAAGCCCTTGTCTAGTCAGGACTTGTTACAGCTaGTGGCCACCAAGTGCAGAGGAAAGAAGACTAGAC +
Preference number: 3 (lower is better)
Translates to: QQSPCLVRTCYS*WPPSAEERRLD
Trigger: GTCTAGTCTTCTTTCCTCTGCACTTGGTGGCCATCAGCTGTAACAAGTCCTGACTAGACAAGGGCTTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp ATGGGTGACCGCAGTTCTGAAATGTTAGTCAGGTCCTaGGCAAGAGGGGGCTTATTTTGTCCATTTGCTCCT +
Preference number: 3 (lower is better)
Translates to: MGDRSSEMLVRS*ARGGLFCPFAP
Trigger: AGGAGCAAATGGACAAAATAAGCCCCCTCTTGCTCAGGACCTGACTAACATTTCAGAACTGCGGTCACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp ATCACTTTATTCCAAGAATGGAATCTCTTTCAAAGCTaGCCACACCCTTGCCTCTGCCCACCACCACCAGCA +
Preference number: 3 (lower is better)
Translates to: ITLFQEWNLFQS*PHPCLCPPPPA
Trigger: TGCTGGTGGTGGTGGGCAGAGGCAAGGGTGTGGTCAGCTTTGAAAGAGATTCCATTCTTGGAATAAAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR GCA 72 bp CAAAGGGAAGCCCATCATACTAACAGCAGATCTCTCTaGAGAAACCCTAAAAGCCACAAGAGATTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: QREAHHTNSRSL*RNPKSHKRLGA
Trigger: AGCCCCCAATCTCTTGTGGCTTTTAGGGTTTCTGCAGAGAGATCTGCTGTTAGTATGATGGGCTTCCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp AATACAAAGGCTGTGACCAAAATGCTCCATGATTCGTaGGAAAGCCAGGAAGCACAGTCTAGCCTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: NTKAVTKMLHDS*ESQEAQSSLWK
Trigger: CTTCCAGAGGCTAGACTGTGCTTCCTGGCTTTCCCACGAATCATGGAGCATTTTGGTCACAGCCTTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp TCACCATTCCAGTCAGCACTAGAAGCTAAAGAGCAGTaGATGTCCTATCTTCAGTTTTGCCAGGGCCACTTC +
Preference number: 3 (lower is better)
Translates to: SPFQSALEAKEQ*MSYLQFCQGHF
Trigger: GAAGTGGCCCTGGCAAAACTGAAGATAGGACATCCACTGCTCTTTAGCTTCTAGTGCTGACTGGAATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CTCCTGAGGTTCTCTGCATCACTGACTCCTCGTTCTTCAGGTCTCAGCTCAAATTGGCTTTTGATGAGCTaGCAGGATCTTAGAGGAAGA +
Preference number: 3 (lower is better)
Translates to: LLRFSASLTPRSSGLSSNWLLMS*QDLRGR
Trigger: TCTTCCTCTAAGATCCTGCAAGCTCATCAAAAGCCA...ATTTGAGCTGAGACCTGAAGAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR CAA 90 bp CTCCTGAGGTTCTCTGCATCACTGACTCCTCGTTCTTCAGGTCTCAGCTCAAATCTTCGAATGGATCGATaGTGTCTGTTTGGTGTAAGG +
Preference number: 3 (lower is better)
Translates to: LLRFSASLTPRSSGLSSNLRMDR*CLFGVR
Trigger: CCTTACACCAAACAGACACAATCGATCCATTCGAAG...ATTTGAGCTGAGACCTGAAGAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR CAA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTGAAATCCTCAAAACCTaGTCAGTAGGCCGAATCCGT +
Preference number: 3 (lower is better)
Translates to: AKADLSFQGFLESDCQSSEILKT*SVGRIR
Trigger: ACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTC...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp CGAATGGATCGATTGTGTCTGTTTGGTGTAAGGCGAGCTCCAGAGCCTGGCACAAAGATTAGGAAGATGTaGAATCTGGGGTTTAGAATG +
Preference number: 3 (lower is better)
Translates to: RMDRLCLFGVRRAPEPGTKIRKM*NLGFRM
Trigger: CATTCTAAACCCCAGATTCAACATCTTCCTAATCTT...TGTGCCAGGCTCTGGAGCTCGCCTTACACCAAACAGACACAATCGATCCATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR-3UTR CAA 90 bp CTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTAGCAGTTTCCAAGGGTTTTaGGAGAGCGATTGCCAAAGC +
Preference number: 3 (lower is better)
Translates to: LEKGSDTIIAHGARVLPSSFQGF*ESDCQS
Trigger: GCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACT...GCTAGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGGCGCTGATTTTCACCTaGGTGTTGCTGACAATTTGC +
Preference number: 3 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWALIFT*VLLTIC
Trigger: GCAAATTGTCAGCAACACCAAGGTGAAAATCAGCGC...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CAA 90 bp TGGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTAGCATGGATTGCATTTaGCTGCTCCCCCACAATACC +
Preference number: 3 (lower is better)
Translates to: WNLNLVHHPGRTSMCLLLSMDCI*LLPHNT
Trigger: GGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCT...AAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR TCA 72 bp CCAACACAGAAAGTGGGTGATTTCTGCATTTCCAACTaGGGTACTCGGTTCATCTCACTGGGACTGGTTAGA +
Preference number: 3 (lower is better)
Translates to: PTQKVGDFCISN*GTRFISLGLVR
Trigger: TCTAACCAGTCCCAGTGAGATGAACCGAGTACCTCAGTTGGAAATGCAGAAATCACCCACTTTCTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp TCTAGTCAGGACTTGTTACAGCTGATGGCCACCAAGTaGAGAGGAAAGAAGACTAGACTGAGAGCTTGCATA +
Preference number: 3 (lower is better)
Translates to: SSQDLLQLMATK*RGKKTRLRACI
Trigger: TATGCAAGCTCTCAGTCTAGTCTTCTTTCCTCTGCACTTGGTGGCCATCAGCTGTAACAAGTCCTGACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp TTTGACTTCTCCACTCCAGCATGGATTGCATTTTGCTaGTCCCCCACAATACCATCCACAACCTTTCTATGG +
Preference number: 3 (lower is better)
Translates to: FDFSTPAWIAFC*SPTIPSTTFLW
Trigger: CCATAGAAAGGTTGTGGATGGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR GCA 72 bp GTCTTTGACTTCTCCACTCCAGCATGGATTGCATTTTaGTGCTCCCCCACAATACCATCCACAACCTTTCTA +
Preference number: 3 (lower is better)
Translates to: VFDFSTPAWIAF*CSPTIPSTTFL
Trigger: TAGAAAGGTTGTGGATGGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CCA 72 bp GGAAGCAAGTTTGTTTTGAGTGTGGGCAAGATCTTGTaGAGGATGACAACTTCCCACAGAGAAAGCATGCCA +
Preference number: 3 (lower is better)
Translates to: GSKFVLSVGKIL*RMTTSHRESMP
Trigger: TGGCATGCTTTCTCTGTGGGAAGTTGTCATCCTCCACAAGATCTTGCCCACACTCAAAACAAACTTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp CATAATTTGTCTCCCAGTGGATACTGGCAAGTAGTGTaGCACGAAGGAGGTCATCTAATGCTGTCTCACCTA +
Preference number: 3 (lower is better)
Translates to: HNLSPSGYWQVV*HEGGHLMLSHL
Trigger: TAGGTGAGACAGCATTAGATGACCTCCTTCGTGCCACACTACTTGCCAGTATCCACTGGGAGACAAATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GGACGCAACAATCATAATTTGTCTCCCAGTGGATACTaGCAAGTAGTGTGGCACGAAGGAGGTCATCTAATG +
Preference number: 3 (lower is better)
Translates to: GRNNHNLSPSGY*QVVWHEGGHLM
Trigger: CATTAGATGACCTCCTTCGTGCCACACTACTTGCCAGTATCCACTGGGAGACAAATTATGATTGTTGCGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGTaGAATATCCCAAATGGAGTAGAAACGCTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: ALTSSISNSLPV*NIPNGVETLGF
Trigger: GAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp GACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTaGTGCATCATCCTGGCAGAACAAGCATGTGTCTTC +
Preference number: 3 (lower is better)
Translates to: DRHLSQPSGTLT*CIILAEQACVF
Trigger: GAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CCA 72 bp TCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCTaGAACCTTAACTTGGTGCATCATCCTGGCAGAACA +
Preference number: 3 (lower is better)
Translates to: SSLQGQAFISAI*NLNLVHHPGRT
Trigger: TGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGTTAGAGCCAGCCTCTaGAAACTGGCTGCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: LISKCKRMKTITNSLSDHVRASL*KLAASL
Trigger: AAGGGAGGCAGCCAGTTTCAAGAGGCTGGCTCTAAC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTAGCACAGCTTCATGTATCTaGAGGGCTGGCACAAGATAT +
Preference number: 3 (lower is better)
Translates to: LEKGSDTIIAHGARVLPSTASCI*RAGTRY
Trigger: ATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGT...GCTAGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR TCA 72 bp TCTCCACCTCCAAGGCCAGAATACAAAACCAATGGCTaGAGCTTCAGCAGCCATTTTGAGTCATGTTATGGT +
Preference number: 3 (lower is better)
Translates to: SPPPRPEYKTNG*SFSSHFESCYG
Trigger: ACCATAACATGACTCAAAATGGCTGCTGAAGCTTCAGCCATTGGTTTTGTATTCTGGCCTTGGAGGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp ACTCTGTCCTGTCCCCCTCAGTCTCAGGTACTTATGTaGAGAACTGATATAGTTCAATTGTCCTTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: TLSCPPQSQVLM*RTDIVQLSLRA
Trigger: TGCCCTCAAGGACAATTGAACTATATCAGTTCTTCACATAAGTACCTGAGACTGAGGGGGACAGGACAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR GCA 72 bp GGAGCTAGTTTACCAAATGCTGGTATGGTAGCTACCTaGAGTGAAACTTCCAAGTCAGTAGTATCTTGTGGG +
Preference number: 3 (lower is better)
Translates to: GASLPNAGMVAT*SETSKSVVSCG
Trigger: CCCACAAGATACTACTGACTTGGAAGTTTCACTGCAGGTAGCTACCATACCAGCATTTGGTAAACTAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp AGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAAGCATGTGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: RHLSQPSGTLTW*IILAEQACVFF
Trigger: GAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CCA 72 bp CTAGGAGGACTTCAGTCTCATAGCACGAACAGGTGTTaGTTGCAGAGGGCAAATTCAAGGAAAGCAAATCAT +
Preference number: 3 (lower is better)
Translates to: LGGLQSHSTNRC*LQRANSRKANH
Trigger: ATGATTTGCTTTCCTTGAATTTGCCCTCTGCAACCAACACCTGTTCGTGCTATGAGACTGAAGTCCTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGTCCTATCTTCAGTTTaGCCAGGGCCACTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: PTQMPINVRTDKENVAHIVLSSV*PGPLLR
Trigger: CCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACTGCAGTGGCATGATCTaGGCTAACTGCAACCTCCGT +
Preference number: 3 (lower is better)
Translates to: LISKCKRMKTITNSLSDHCSGMI*ANCNLR
Trigger: ACGGAGGTTGCAGTTAGCCAAGATCATGCCACTGCA...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp TACTCTGACCAGACACACAATTGCATATGGAGAAGCTaGGGTTTGGCAAGAACATACAGTGCATGTAGTGAC +
Preference number: 3 (lower is better)
Translates to: YSDQTHNCIWRS*GLARTYSACSD
Trigger: GTCACTACATGCACTGTATGTTCTTGCCAAACCTCAGCTTCTCCATATGCAATTGTGTGTCTGGTCAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CATGTCTTTGCTGAAAACCCTACTGGATACGCACAATaGAGAGTGCATTCTATAAGACTGGAGGCAAAAGCA +
Preference number: 3 (lower is better)
Translates to: HVFAENPTGYAQ*RVHSIRLEAKA
Trigger: TGCTTTTGCCTCCAGTCTTATAGAATGCACTCTGCATTGTGCGTATCCAGTAGGGTTTTCAGCAAAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp TGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAATGGCCATTCTGGACCTaGCTTCTCTCATTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: CFRKFKISSTFQKACEIEWPFWT*LLSFPS
Trigger: AGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCA...TTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CAA 90 bp TCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGAGATGGCCATTCTGGACCTaGCTTCTCTCATTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SGSLKSPPPFRRHVKLKRWPFWT*LLSFPS
Trigger: AGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCA...TCTCTTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR TCA 72 bp CTAAGAGAAAAGTTCCTGACTGCAGGTCTATGTTTGTaGTTTCTGTCCCACAAGCCCATGAGCTGTATGTTT +
Preference number: 3 (lower is better)
Translates to: LREKFLTAGLCL*FLSHKPMSCMF
Trigger: AAACATACAGCTCATGGGCTTGTGGGACAGAAATCACAAACATAGACCTGCAGTCAGGAACTTTTCTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp GCAATTCCTCAAGGATCTAGAACTAGAAATACCATTTaGTCCAGCAATCCCCTACTGGGTGTATACCCAAAG +
Preference number: 3 (lower is better)
Translates to: AIPQGSRTRNTI*SSNPLLGVYPK
Trigger: CTTTGGGTATACACCCAGTAGGGGATTGCTGGATCAAATGGTATTTCTAGTTCTAGATCCTTGAGGAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp AAAATGGGACCAGGAGTTATCTTCTCAACACTACCCTaGAACTGCCGCCCAAACTTCCTTTTTGACAAAGAT +
Preference number: 3 (lower is better)
Translates to: KMGPGVIFSTLP*NCRPNFLFDKD
Trigger: ATCTTTGTCAAAAAGGAAGTTTGGGCGGCAGTTTCAGGGTAGTGTTGAGAAGATAACTCCTGGTCCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp CTGTCCCCCTCAGTCTCAGGTACTTATGTGAAGAACTaGTATAGTTCAATTGTCCTTGAGGGCAACTTGTTT +
Preference number: 3 (lower is better)
Translates to: LSPSVSGTYVKN*YSSIVLEGNLF
Trigger: AAACAAGTTGCCCTCAAGGACAATTGAACTATATCAGTTCTTCACATAAGTACCTGAGACTGAGGGGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR GCA 72 bp ACCCATTGGTGTGTTGTATTCGAGACCCATCTCATGTaGAAAGACACACATAGGCTCAAAATAAAAGGATGG +
Preference number: 3 (lower is better)
Translates to: THWCVVFETHLM*KDTHRLKIKGW
Trigger: CCATCCTTTTATTTTGAGCCTATGTGTGTCTTTGCACATGAGATGGGTCTCGAATACAACACACCAATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CATGACCATGTAAACACTCCTTCCAAAGGTCACCAATaGCAAAGACCAAAGGTAGATAAAGCCACAAAGATG +
Preference number: 3 (lower is better)
Translates to: HDHVNTPSKGHQ*QRPKVDKATKM
Trigger: CATCTTTGTGGCTTTATCTACCTTTGGTCTTTGGCATTGGTGACCTTTGGAAGGAGTGTTTACATGGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CCATTTGTGTTGAAACCATATAGAACTGCTTGTCTCTaGAGTTCCCAAGAACAACTTCATCCTGACTCTCTG +
Preference number: 3 (lower is better)
Translates to: PFVLKPYRTACL*SSQEQLHPDSL
Trigger: CAGAGAGTCAGGATGAAGTTGTTCTTGGGAACTGCAGAGACAAGCAGTTCTATATGGTTTCAACACAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CCA 72 bp CACTGTTGGTGGGAGTGTAATTTACTTCAACCATTGTaGATGACAGTGTGGCAATTCCTCAAGGATCTAGAA +
Preference number: 3 (lower is better)
Translates to: HCWWECNLLQPL*MTVWQFLKDLE
Trigger: TTCTAGATCCTTGAGGAATTGCCACACTGTCATCCACAATGGTTGAAGTAAATTACACTCCCACCAACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGTAGTGACCATGTCTTaGCTGAAAACCCTACTGGAT +
Preference number: 3 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYVVTMS*LKTLLD
Trigger: ATCCAGTAGGGTTTTCAGCAAAGACATGGTCACTAC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCATTTTCACCTTGGTGTaGCTGACAATTTGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSIFTLV*LTICRN
Trigger: GTTCCTGCAAATTGTCAGCAACACCAAGGTGAAAAT...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR TCA 72 bp GAAATGGATAAATTCCTGGACACATTCACCCTACCATaGCTAACCCAGGAAGAAGTTGAATCCCTGAATAGA +
Preference number: 3 (lower is better)
Translates to: EMDKFLDTFTLP*LTQEEVESLNR
Trigger: TCTATTCAGGGATTCAACTTCTTCCTGGGTTAGTCATGGTAGGGTGAATGTGTCCAGGAATTTATCCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp TCCCTCCATTGCAATAATCAAGCAGCCCTACCTACATaGTGGGTCTTTCCATTTTTATCGAATTGCAAGAAA +
Preference number: 3 (lower is better)
Translates to: SLHCNNQAALPT*WVFPFLSNCKK
Trigger: TTTCTTGCAATTCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAATGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATTCTTCACTGCAAAGTaGGGGGTGGACCAAGTTTTG +
Preference number: 3 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVFFTAK*GVDQVL
Trigger: CAAAACTTGGTCCACCCCCAACTTTGCAGTGAAGAA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATTCAAATCATTTAAACTaGGGCAAGGTTTTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYSNHLN*GKVFPA
Trigger: AGCTGGGAAAACCTTGCCCAAGTTTAAATGATTTGA...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATTCCTTCCTGTCTCCTaGTCCATTCCCTTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLFLPVS*SIPFLS
Trigger: AGAAAGAAAGGGAATGGACAAGGAGACAGGAAGGAA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGCACAGACTGGCAAATaGGATAAAGAGTCAAAACCC +
Preference number: 3 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRAQTGK*DKESKP
Trigger: GGGTTTTGACTCTTTATCCAATTTGCCAGTCTGTGC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAGCCAGAGAGAAAAGTaGGGTTACCTACAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRSQREK*GYLQRE
Trigger: TTCCCTTTGTAGGTAACCCAACTTTTCTCTCTGGCT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp TTTCTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGCATCTTCTTTCCAGTTaGCAAGGACAGGCATTTATC +
Preference number: 3 (lower is better)
Translates to: FLYASGSLKSPPPFRRHVHLLSS*QGQAFI
Trigger: GATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG...CACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CAA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATATAGTTCAATTGTCCTaGAGGGCAACTTGTTTTGAC +
Preference number: 3 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYIVQLS*RATCFD
Trigger: GTCAAAACAAGTTGCCCTCAAGGACAATTGAACTAT...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR TCA 72 bp TCCTTGTCTCTAGGGAAATCACATCCGGCTCTTTGCTaGCTGTCTCCAGAATTTCGAAATAAAAAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: SLSLGKSHPALC*LSPEFRNKKRN
Trigger: ATTTCTCTTTTTATTTCGAAATTCTGGAGACAGTCAGCAAAGAGCCGGATGTGATTTCCCTAGAGACAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp ATTAGAAGTTCTGGCCAGGGCAAACAGGCAAGAGAATaGAATAAAGCGTATTCGAATAGGAAGAGAGAAAGT +
Preference number: 3 (lower is better)
Translates to: IRSSGQGKQARE*NKAYSNRKRES
Trigger: ACTTTCTCTCTTCCTATTCGAATACGCTTTATTTCATTCTCTTGCCTGTTTGCCCTGGCCAGAACTTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp AATTCCTTAGTGCTTTCAGATCACAAGTTCTCAATGTaGGTTATCACTCCTAAGTTCCTACCACAGGATGAG +
Preference number: 3 (lower is better)
Translates to: NSLVLSDHKFSM*VITPKFLPQDE
Trigger: CTCATCCTGTGGTAGGAACTTAGGAGTGATAACTCACATTGAGAACTTGTGATCTGAAAGCACTAAGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp ATCTCATTATACCATAGCTCCTATTCAGAACATGCATaGAGCATGTCTACAGAATTACTGACGCTTTGCCCT +
Preference number: 3 (lower is better)
Translates to: ISLYHSSYSEHA*SMSTELLTLCP
Trigger: AGGGCAAAGCGTCAGTAATTCTGTAGACATGCTTCATGCATGTTCTGAATAGGAGCTATGGTATAATGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp AAAGACTATAATACCCAGGTTTCTTCACTGCAAAGTTaGGGGTGGACCAAGTTTTGGCTAATGAGATGTAAA +
Preference number: 3 (lower is better)
Translates to: KDYNTQVSSLQS*GWTKFWLMRCK
Trigger: TTTACATCTCATTAGCCAAAACTTGGTCCACCCCCAACTTTGCAGTGAAGAAACCTGGGTATTATAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGCAGATCAATCTAACTaGTTTCTGATGAGTGGCAAA +
Preference number: 3 (lower is better)
Translates to: PTQMPINVRTDKENVAHIADQSN*FLMSGK
Trigger: TTTGCCACTCATCAGAAACAAGTTAGATTGATCTGC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAAAGAAGTCAATATTTaGCTAGGGCAAAGTGTCGAG +
Preference number: 3 (lower is better)
Translates to: PTQMPINVRTDKENVAHIKEVNI*LGQSVE
Trigger: CTCGACACTTTGCCCTAGCAAAATATTGACTTCTTT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATTCTGTCAGTTCACTTTaGGGCATAATATCCTTAAGT +
Preference number: 3 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYSVSSL*GIISLS
Trigger: ACTTAAGGATATTATGCCCAAAAGTGAACTGACAGA...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGCTTCAGCAGCCATTTaGAGTCATGTTATGGTCTTA +
Preference number: 3 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVASAAI*SHVMVL
Trigger: TAAGACCATAACATGACTCAAAATGGCTGCTGAAGC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACACTCTTAAGTGGGAGTaGAACAATGAGAACATATGG +
Preference number: 3 (lower is better)
Translates to: LISKCKRMKTITNSLSDHTLKWE*NNENIW
Trigger: CCATATGTTCTCATTGTTCAACTCCCACTTAAGAGT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAAGAGTCAAAACCCATaGGTGTGTTGTATTCGAGAC +
Preference number: 3 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLKSQNP*VCCIRD
Trigger: GTCTCGAATACAACACACCAATGGGTTTTGACTCTT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp TCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGAGAACTGATATAGTTCAATaGTCCTTGAGGGCAACTTGT +
Preference number: 3 (lower is better)
Translates to: SGSLKSPPPFRRHVKLKRTDIVQ*SLRATC
Trigger: ACAAGTTGCCCTCAAGGACAATTGAACTATATCAGT...TCTCTTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR TCA 72 bp TGGAGGAATGAAGGCAAACTTTGTCACATTAAACTCTaGTTCTTAACAGAGTCTCATGAAACCTATAGGCTC +
Preference number: 3 (lower is better)
Translates to: WRNEGKLCHIKL*FLTESHETYRL
Trigger: GAGCCTATAGGTTTCATGAGACTCTGTTAAGAATCAGAGTTTAATGTGACAAAGTTTGCCTTCATTCCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp CGAGAACTTCATGAAGCATACACAAGTATCAATAGCTaGATCGATCAAGCAGAAGAAAGGATATCAGAGACT +
Preference number: 3 (lower is better)
Translates to: RELHEAYTSINS*IDQAEERISET
Trigger: AGTCTCTGATATCCTTTCTTCTGCTTGATCGATTCAGCTATTGATACTTGTGTATGCTTCATGAAGTTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp CTATTCACAATAGCAAAGACTTGGAACCAACCCAAATaGCCATCAATGTTAGAACGGATAAAGAAAATGTGG +
Preference number: 3 (lower is better)
Translates to: LFTIAKTWNQPK*PSMLERIKKMW
Trigger: CCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp AGAAACAATAATGAAAAACCCAAAGATGTGTCAATCTaGAATTACATCATGGTTACCCAGGCACTCCCTTTG +
Preference number: 3 (lower is better)
Translates to: RNNNEKPKDVSI*NYIMVTQALPL
Trigger: CAAAGGGAGTGCCTGGGTAACCATGATGTAATTGCAGATTGACACATCTTTGGGTTTTTCATTATTGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp GAGTGTAATTTACTTCAACCATTGTGGATGACAGTGTaGCAATTCCTCAAGGATCTAGAACTAGAAATACCA +
Preference number: 3 (lower is better)
Translates to: ECNLLQPLWMTV*QFLKDLELEIP
Trigger: TGGTATTTCTAGTTCTAGATCCTTGAGGAATTGCCACACTGTCATCCACAATGGTTGAAGTAAATTACACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp TCTGTTAAGTTTTATTTAAACGCTAACCAGTCAAACTaGGTCCAAAGTCACCATTCTCAGATCACCACACAT +
Preference number: 3 (lower is better)
Translates to: SVKFYLNANQSN*VQSHHSQITTH
Trigger: ATGTGTGGTGATCTGAGAATGGTGACTTTGGACCCAGTTTGACTGGTTAGCGTTTAAATAAAACTTAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp CTCCATTGCAATAATCAAGCAGCCCTACCTACATGCTaGGTCTTTCCATTTTTATCGAATTGCAAGAAAATA +
Preference number: 3 (lower is better)
Translates to: LHCNNQAALPTC*VFPFLSNCKKI
Trigger: TATTTTCTTGCAATTCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAATGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGGAAGGCTAAGATACTaGGGGATATACACATTTAGA +
Preference number: 3 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRGRLRY*GIYTFR
Trigger: TCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATCTGCAAAGGAATTTaGGGGTGGATTTATTCACCA +
Preference number: 3 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRICKGI*GWIYSP
Trigger: TGGTGAATAAATCCACCCCAAAATTCCTTTGCAGAT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp ATTTCAAGAGACTCAATTCCAAAATTTATGTGCCTTTaGAAAAGTATGGCCATTCTGGACCTTGCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: ISRDSIPKFMCL*KSMAILDLASL
Trigger: GAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CCA 72 bp TTTAGGTGGTTAATAGACGGACTTCTTAGAGATGCATaGGCTGAGTTAATAACCACATATTCACAACTTTCT +
Preference number: 3 (lower is better)
Translates to: FRWLIDGLLRDA*AELITTYSQLS
Trigger: AGAAAGTTGTGAATATGTGGTTATTAACTCAGCCCATGCATCTCTAAGAAGTCCGTCTATTAACCACCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CCA 72 bp CAAAATTTATGTGCCTTTGAAAAAGTATGGCCATTCTaGACCTTGCTTCTCTCATTCCCTTCTATAATCATC +
Preference number: 3 (lower is better)
Translates to: QNLCAFEKVWPF*TLLLSFPSIII
Trigger: GATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAAGCTGGATCCATTATTaGTACCTATTTATCAGCTGT +
Preference number: 3 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVSWIHY*YLFISC
Trigger: ACAGCTGATAAATAGGTACAAATAATGGATCCAGCT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAAGATGATTCAAGTTTaGCCTGCCACCAAATTTTTC +
Preference number: 3 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLKMIQV*PATKFF
Trigger: GAAAAATTTGGTGGCAGGCAAAACTTGAATCATCTT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGACTTTAACACTCCATaGTGTGTATTAGACAGATCA +
Preference number: 3 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRDFNTP*CVLDRS
Trigger: TGATCTGTCTAATACACACAATGGAGTGTTAAAGTC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp AGGAAGAGAGAAAGTCAAATTATCTCTGTTTGCAGATaGTATGGTTGTACATTTAGAAAACCCCATTGTCTC +
Preference number: 3 (lower is better)
Translates to: RKRESQIISVCR*YGCTFRKPHCL
Trigger: GAGACAATGGGGTTTTCTAAATGTACAACCATATCATCTGCAAACAGAGATAATTTGACTTTCTCTCTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp AGTACTTCATTGGAATTACCCAGATTAACGGGTAATTaGCAAGTATTACTGTACAACTCTGCACTTCTTTTT +
Preference number: 3 (lower is better)
Translates to: STSLELPRLTGN*QVLLYNSALLF
Trigger: AAAAAGAAGTGCAGAGTTGTACAGTAATACTTGGCAATTACCCGTTAATCTGGGTAATTCCAATGAAGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR TCA 72 bp TTACACACCGGAGAGAAAATTAGACTTATTCATGAATaGAGAAGAAACATGTCCCAGTTTGATATAAGCTCT +
Preference number: 3 (lower is better)
Translates to: LHTGEKIRLIHE*RRNMSQFDISS
Trigger: AGAGCTTATATCAAACTGGGACATGTTTCTTCTTCATTCATGAATAAGTCTAATTTTCTCTCCGGTGTGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR GCA 72 bp ATAAATCATAGAGAATATTGGCAAATACTCAAGATCTaGAAAGGAATTTTGGGGTGGATTTATTCACCACTG +
Preference number: 3 (lower is better)
Translates to: INHREYWQILKI*KGILGWIYSPL
Trigger: CAGTGGTGAATAAATCCACCCCAAAATTCCTTTGCAGATCTTGAGTATTTGCCAATATTCTCTATGATTTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCAGTGCTGTTCAGAAGCCTGGCGTCCCTACACCAGCGGAGGCAGGAGAGGTCGCGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: AVLFRSLASLHQRRQERSRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...CGACCTCTCCTGCCTCCGCTGGTGTAGGGACGCCAGGCTTCTGAACAGCACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDCSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AGTTCACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SSHREALQRLQRGVRSTPRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...TGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp ACACCTGGAGCCTGGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTTCCCTCCCGCCCAGGGAGGGCATaGAAGCTCTGTGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TPGAWCTEGLHVLPHLPSRPGRA*KLCAPS
Trigger: GGAAGGGGCACAGAGCTTCCATGCCCTCCCTGGGCG...GGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp CCTGCTGTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCGCTGCTGCCTCCTaGCTCCGGAGTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PAVPKHRPQLGLLMAYLVAAAAS*LRSSPR
Trigger: GCGGGGACTACTCCGGAGTCAGGAGGCAGCAGCGGC...CACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCACAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCGCGTCCGAGCGGCGCTaGCTGCCAGAGATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: VPKHRPQLGLLMAYLVATASERR*LPEILV
Trigger: GACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGC...GGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GCCAAGCAAGGCACAGGCGGTGGAGAGTGGGGATGCTCCCTGAGCCCCAAGCAATCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: AKQGTGGGEWGCSLSPKQSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...TTGCTTGGGGCTCAGGGAGCATCCCCACTCTCCACCGCCTGTGCCTTGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGCTCTGGCTAGCATCTaGCAGGTGCCCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRALASI*QVPLWD
Trigger: GTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GCAGTGCTGTTCAGAAGCCTGGCGTCCCTACACCAGCGGAGGCAGGAGAGGTCGTCACCCCAGGCTGGATaGAGTGCAGTGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: AVLFRSLASLHQRRQERSSPQAG*SAVVQS
Trigger: AGATTGCACCACTGCACTTCATCCAGCCTGGGGTGA...CGACCTCTCCTGCCTCCGCTGGTGTAGGGACGCCAGGCTTCTGAACAGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GTGTGGAATATCCCAAATGGAGTAGAAACGCTGGGCTTCAGAGGCAGACCCTGCTCCTGGAGGACGGCCTaGCGTGGGGAGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VWNIPNGVETLGFRGRPCSWRTA*RGEPGE
Trigger: CTCCCCAGGCTCCCCACGTCAGGCCGTCCTCCAGGA...GCAGGGTCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTGCGGGCCGAGGTCAGTaGGGTGCGCACGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSAGRGQ*GAHDPS
Trigger: GCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGC...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGGAAGTGCAAGGGGTTaGGGAACTCCCTCCCCTAGC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRGSARG*GTPSPS
Trigger: GCTAGGGGAGGGAGTTCCCCAACCCCTTGCACTTCC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGCGTCCGAGCGGCGCTaGCTGCCAGAGATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GLEVSPTLSRILILPHCGASERR*LPEILV
Trigger: GACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGC...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGGCGTCCGAGCGGCGCTaGCTGCCAGAGATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLASERR*LPEILV
Trigger: GACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGC...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGCGCTGCAAAGCCACTaGAGCCAGACTGCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRALQSH*SQTASL
Trigger: TAGAGAGGCAGTCTGGCTTCAGTGGCTTTGCAGCGC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGCCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVPRSVR*ARPERL
Trigger: CAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGG...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AGGATAAAGCTGGGGAAGAGGCTTGACATCAACTTAGTTCACACAGAGAGGCCCGCGGGCCGAGGTCAGTaGGGTGCGCACGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: RIKLGKRLDINLVHTERPAGRGQ*GAHDPS
Trigger: GCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGC...GGGCCTCTCTGTGTGAACTAAGTTGATGTCAAGCCTCTTCCCCAGCTTTATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAATGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: FLIVGSEKGGNKRPVVFKCSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...TTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTGCCGTGAGTGGGGGTaGACTCCGGTCCAGATACTA +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRCREWG*TPVQIL
Trigger: TAGTATCTGGACCGGAGTGCACCCCCACTCACGGCA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACACCTGGAGCCTGGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTTCCCTCCGGCATGGAAGCTCTGTaGCCCTTCCCTGGTACCTTG +
Preference number: 4 (lower is better)
Translates to: TPGAWCTEGLHVLPHLPSGMEAL*PFPGTL
Trigger: CAAGGTACCAGGGAAGGGGCACAGAGCTTCCATGCC...GGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp GTGACTTTAGGACAACAAGAACCTTCTCTGTGCCTAGCACTCTCCCTGTCGTTCCACGACCCGAGCGTCTaGCGGGGGTCCCTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VTLGQQEPSLCLALSLSFHDPSV*RGSLRP
Trigger: GGGACGCAGGGACCCCCGCCAGACGCTCGGGTCGTG...GAACGACAGGGAGAGTGCTAGGCACAGAGAAGGTTCTTGTTGTCCTAAAGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp ACACCTGGAGCCTGGTGCACAGAAGGGCTGCATGTGCTTCCCCATCTTCCCTCCTCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TPGAWCTEGLHVLPHLPSSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...GGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAAAACTCCCATCTCCTaGGGACAGAGCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRKTPIS*GQSTWG
Trigger: CCCCCAGGTGCTCTGTCCCCAGGAGATGGGAGTTTT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCCAGGAAGTTCAGTCTaGGTGGAGCCCACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDPGSSV*VEPTAA
Trigger: CGCTGCAGTGGGCTCCACTCAGACTGAACTTCCTGG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAGTCTCGTTCTGTCACCCCAGGCTGGATGAAGTGCAGTGGTGCAATCTCAGCGAGGTTCCTGTAGAGTaGTGCGCCCAGGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GVSFCHPRLDEVQWCNLSEVPVE*CAQGGH
Trigger: ATGCCCTCCCTGGGCGCATCACTCTACAGGAACCTC...GCTGAGATTGCACCACTGCACTTCATCCAGCCTGGGGTGACAGAACGAGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACCTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNLVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGTGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRCSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGCCTCACCTGGGAAGTaGAAGGGGTTGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDASPGK*KGLGNS
Trigger: GGAGTTCCCCAACCCCTTGCACTTCCCAGGTGAGGC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTGGTTAGACAGTGGGTaGAGCCCACGGAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDWLDSG*SPRRAS
Trigger: GCTTGCCCTCCGTGGGCTGCACCCACTGTCTAACCA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCCAAGCAAGGCACAGGCGGTGGAGAGTGGGGATGCTCCCTGAGCCCCAAGCAAGCTACAGATGGCGAGTaGGTGAATGTCTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: AKQGTGGGEWGCSLSPKQATDGE*VNVCLG
Trigger: CCCTAAACAGACATTCACCCACTCGCCATCTGTAGC...TTGCTTGGGGCTCAGGGAGCATCCCCACTCTCCACCGCCTGTGCCTTGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGCACGACCCGAGCGTCTaGCGGGGGTCCCTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRHDPSV*RGSLRP
Trigger: GGGACGCAGGGACCCCCGCCAGACGCTCGGGTCGTG...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCAAGCAGAAGCAGGGTaGGGCATTGCCTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDQAEAG*GIASPG
Trigger: CCCAGGTGAGGCAATGCCCCACCCTGCTTCTGCTTG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGTGTCCCGGGGGTGGTTaGGGCTGTGCTACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GLEVSPTLSRILILPHCGCPGGG*GCATPF
Trigger: GAAGGGGGTAGCACAGCCCCAACCACCCCCGGGACA...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CCTGCTGTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGCTTATGTCCCGGGGGTaGTTGGGGCTGTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: PAVPKHRPQLGLLMAYLVLMSRG*LGLCYP
Trigger: GGGGTAGCACAGCCCCAACCACCCCCGGGACATAAG...CACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCACAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GCCAAGCAAGGCACAGGCGGTGGAGAGTGGGGATGCTCCCTGAGCCCCAAGCAATATCGAGGTCTGTACTaGATGGTCCCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: AKQGTGGGEWGCSLSPKQYRGLY*MVPNKP
Trigger: GGGTTTGTTTGGGACCATTCAGTACAGACCTCGATA...TTGCTTGGGGCTCAGGGAGCATCCCCACTCTCCACCGCCTGTGCCTTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp GCAGTGCTGTTCAGAAGCCTGGCGTCCCTACACCAGCGGAGGCAGGAGAGGTCGTATCGAGGTCTGTACTaGATGGTCCCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: AVLFRSLASLHQRRQERSYRGLY*MVPNKP
Trigger: GGGTTTGTTTGGGACCATTCAGTACAGACCTCGATA...CGACCTCTCCTGCCTCCGCTGGTGTAGGGACGCCAGGCTTCTGAACAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GGAGTCTCGTTCTGTCACCCCAGGCTGGATGAAGTGCAGTGGTGCAATCTCAGCCAGAGGCTGAAAGTGTaGCTGAGGGAGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GVSFCHPRLDEVQWCNLSQRLKV*LREQVW
Trigger: CCACACCTGCTCCCTCAGTCACACTTTCAGCCTCTG...GCTGAGATTGCACCACTGCACTTCATCCAGCCTGGGGTGACAGAACGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CCTCTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTGCGGGCCGAGGTCAGTaGGGTGCGCACGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: PLEKGSDTIIAHGARVLPAGRGQ*GAHDPS
Trigger: GCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGC...AGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp AGGATAAAGCTGGGGAAGAGGCTTGACATCAACTTAGTTCACACAGAGAGGCCCCTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RIKLGKRLDINLVHTERPLVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...GGGCCTCTCTGTGTGAACTAAGTTGATGTCAAGCCTCTTCCCCAGCTTTATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAGCAGGGTGGGGCATTaGCTCACCTGGGAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDSRVGH*LTWEVQ
Trigger: TTGCACTTCCCAGGTGAGGCAATGCCCCACCCTGCT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTCTGTCCACTGGCTATaGCTCTTGCCCCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRSVHWL*LLPLCT
Trigger: TGTACACAGGGGCAAGAGCCATAGCCAGTGGACAGA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGAAGAGGGTTGCAAATaGGCTCTCCTTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSREEGCK*ALLHPG
Trigger: CCCAGGATGAAGGAGAGCCCATTTGCAACCCTCTTC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTGCATCATCCTGGCCGCTGCTGCCTCCTaGCTCCGGAGTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: KDRHLSQPSGTLTWCIILAAAAS*LRSSPR
Trigger: GCGGGGACTACTCCGGAGTCAGGAGGCAGCAGCGGC...CAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp TGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGGCGTCCGAGCGGCGCTaGCTGCCAGAGATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: WRAIAKALTSSISNSLPVASERR*LPEILV
Trigger: GACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGC...CACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: VPKHRPQLGLLMAYLVATEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...GGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCACAGTGGTTGTCTGTaGGAATGTAGGCATTGCCTG +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRHSGCL*ECRHCL
Trigger: CAGGCAATGCCTACATTCTCACAGACAACCACTGTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAGTCTCGTTCTGTCACCCCAGGCTGGATGAAGTGCAGTGGTGCAATCTCAGCTCTCCAGGATTCAGATaGCTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GVSFCHPRLDEVQWCNLSSPGFR*LSCLSL
Trigger: GAGGCTGAGGCAGGAGAGTCATCTGAATCCTGGAGA...GCTGAGATTGCACCACTGCACTTCATCCAGCCTGGGGTGACAGAACGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGCGGGCCGAGGTCAGTaGGGTGCGCACGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCAGRGQ*GAHDPS
Trigger: GCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGC...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR GCA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTTGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCCSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp AAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACTGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: KADLSFQGFLESDCQSSYCSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...GTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp GTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: VPKHRPQLGLLMAYLVATNAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...GGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGCGTCTGGAAAGTaGAGTGGGCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLWASGK*SGLSGS
Trigger: GGACCCAGACAGCCCACTCCACTTTCCAGACGCCCA...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp CATACACAAAACCCACCAACATCCCAGGGCCGGAGTCTGCTTGTCTTTGACTTCTGCAGGTCTGTTTCTTaGGGAGGGGGAGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HTQNPPTSQGRSLLVFDFCRSVS*GGGARR
Trigger: CCGCCTGGCTCCCCCTCCCCAAGAAACAGACCTGCA...GAAGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGTTTTGTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTCGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CCA 90 bp AGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGACGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: REAHGTNEMLNVKPVPTGRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...TCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCCGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGTGGGCAAGATCTTGTaGAGGATGACAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRVGKIL*RMTTSH
Trigger: GTGGGAAGTTGTCATCCTCCACAAGATCTTGCCCAC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACGCAAGGCACAGGCGGTaGAGAGTGGGGATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNARHRR*RVGMLP
Trigger: AGGGAGCATCCCCACTCTCCACCGCCTGTGCCTTGC...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp TTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTCCATGGAGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LTWCIILAEQACVFFFHGARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...TCCATGGAAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTTTCAAGCACAAAACTaGGTGGCCATTTGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRFQAQN*VAIWAD
Trigger: GTCTGCCCAAATGGCCACTCAGTTTTGTGCTTGAAA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCAAGGCACCGCTGGGGAAGAGGCTTaGCATCAACTTAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: TQATVGAAYGIPSGHQGTAGEEA*HQLSSH
Trigger: GTGTGAACTAAGTTGATGTCAAGCCTCTTCCCCAGC...GGTGCCTTGGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp ATGAGCTACTCTGCAGTGTCACTGATCTGTTGCTGTCTCCTGTCTGAAGAATCTCTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: MSYSAVSLICCCLLSEESLVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...AGATTCTTCAGACAGGAGACAGCAACAGATCAGTGACACTGCAGAGTAGCTCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GCCAGGGTTCTTCCTAGCCCATTTGTGTTGAAACCATATAGAACTGCTTGTCTCCTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: ARVLPSPFVLKPYRTACLLVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...GAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp AGTTCACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCAAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SSHREALQRLQRGVRSTPNAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...TGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGGAGGCAGCAATCTTTaGTGTTCTGCAGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDGGSNL*CSAASA
Trigger: AGCAGAGGCTGCAGAACAGCAAAGATTGCTGCCTCC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAGTCTCGTTCTGTCACCCCAGGCTGGATGAAGTGCAGTGGTGCAATCTCAGCCCTTCCCTGGTACCTTaGCCTATGTGTCTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: GVSFCHPRLDEVQWCNLSPSLVP*PMCLFV
Trigger: GACGAAGAGACACATAGGGCAAGGTACCAGGGAAGG...GCTGAGATTGCACCACTGCACTTCATCCAGCCTGGGGTGACAGAACGAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp GCCCCAAGCAACAGCCTGGTAAGGAACCCCGCCCGTCTTCGCCTTTCTGAGTCCGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: APSNSLVRNPARLRLSESGTLTW*IILAEQ
Trigger: TTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCC...GGACTCAGAAAGGCGAAGACGGGCGGGGTTCCTTACCAGGCTGTTGCTTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TGTGTAATTACGACACTTCGAATGGATCGATTGTGTCTGTTTGGTGTAAGGCGACGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CVITTLRMDRLCLFGVRRRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...TCGCCTTACACCAAACAGACACAATCGATCCATTCGAAGTGTCGTAATTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp TGGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTGGCGCCGGCAGAAGCTaGGGGCCTCTGCGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: WNLNLVHHPGRTSMCLLLGAGRS*GPLRQA
Trigger: TGCTTGGCGCAGAGGCCCCCAGCTTCTGCCGGCGCC...AAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp CTAGTTGGTCCCTCAATGTGTAATTACGACACTTCGAATGGATCGATTGTGTCTGCCGCTGCTGCCTCCTaGCTCCGGAGTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LVGPSMCNYDTSNGSIVSAAAAS*LRSSPR
Trigger: GCGGGGACTACTCCGGAGTCAGGAGGCAGCAGCGGC...AGACACAATCGATCCATTCGAAGTGTCGTAATTACACATTGAGGGACCAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAAGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp ACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCAAGGCACCTATCGAGGTCTGTACTaGATGGTCCCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: TQATVGAAYGIPSGHQGTYRGLY*MVPNKP
Trigger: GGGTTTGTTTGGGACCATTCAGTACAGACCTCGATA...GGTGCCTTGGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCACAAAGATACTCTTTaGGAAGAGCAACCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRHKDTL*EEQPQD
Trigger: GTCTTGGGGTTGCTCTTCTCAAAGAGTATCTTTGTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCATGTTGCTTGTACACCTCTTTTCTCAGATTGGAAGGCATCTCCTGAGGTTCCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TMLLVHLFSQIGRHLLRFPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...GAACCTCAGGAGATGCCTTCCAATCTGAGAAAAGAGGTGTACAAGCAACATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR GCA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTGRIEYAVQEPALSISEPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CCTCTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLEKGSDTIIAHGARVLPPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...AGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CGAATGGATCGATTGTGTCTGTTTGGTGTAAGGCGAGCTCCAGAGCCTGGCACAAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: RMDRLCLFGVRRAPEPGTNAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...TGTGCCAGGCTCTGGAGCTCGCCTTACACCAAACAGACACAATCGATCCATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR GCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVNAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRRKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCACACCAGGGCCTGTTaGGGAGTGGGGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDHTRAC*GVGDKG
Trigger: CCCCTTGTCCCCCACTCCCCAACAGGCCCTGGTGTG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTCTCCCAGTGGATACTaGCAAGTAGTGTGGCACGAA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDSPSGY*QVVWHE
Trigger: TTCGTGCCACACTACTTGCCAGTATCCACTGGGAGA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp CTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATaGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LPNSVSDPHSSS*WGVRRAAIRDQ
Trigger: CTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTGCCGCTGCTGCCTCCTaGCTCCGGAGTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLAAAAS*LRSSPR
Trigger: GCGGGGACTACTCCGGAGTCAGGAGGCAGCAGCGGC...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTATGAGAGTCCTCATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: NLVSRPNPSLHKWCYESPHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...AGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAACAGTCAGCAGTGCTaGCTTAACATCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDNSQQC*LNISTA
Trigger: TGCTGTGGAGATGTTAAGTCAGCACTGCTGACTGTT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGGGAAGGGGCAGCTGTaGGCGCAGCTTCAGCAGACT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDGKGQL*AQLQQT
Trigger: AGTCTGCTGAAGCTGCGCTCACAGCTGCCCCTTCCC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTGTGGAATATCCCAAATGGAGTAGAAACGCTGGGCTTCAGAGGCAGACCCTGCTGGGGGAAGGAATGCTaGCCTTGCGAAGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: VWNIPNGVETLGFRGRPCWGKEC*PCEASI
Trigger: AATGGAAGCTTCGCAAGGTCAGCATTCCTTCCCCCA...GCAGGGTCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp CACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATGAGGGCAACTTGTTTTaGCAAACACTGAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: HTERPFKDCREEFAAPHHEGNLF*QTLRAI
Trigger: GATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCCTC...ATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGTGGGCACAGTGGACTTaGCAGTGCCTTAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: GLEVSPTLSRILILPHCGWAQWT*QCLKPL
Trigger: CAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCA...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp CCTGCTGTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGACTCTGCAGTGTCACTaGTCTGTTGCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PAVPKHRPQLGLLMAYLVTLQCH*SVAVSC
Trigger: ACAGGAGACAGCAACAGATCAGTGACACTGCAGAGT...CACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCACAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAACCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKPRSVR*ARPERL
Trigger: CAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGG...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR GCA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTCCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PTASCILRAGTRYFIRRCPRSVR*ARPERL
Trigger: CAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGG...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp TCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGAGAGCGGGCCGAGGTCAGTaGGGTGCGCACGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: SGSLKSPPPFRRHVKLKRAGRGQ*GAHDPS
Trigger: GCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGC...TCTCTTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LYASGSLKSPPPFRRHVKCSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...TTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCTGCAGCAGCCCATGGTaGCGGCGGCGTCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIICSSPW*RRRPSG
Trigger: GCCGCTCGGACGCCGCCGGCACCATGGGCTGCTGCA...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGTGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVCNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGTTCAGACTCTGCAGTaGCTACTAGAACTATGTACA +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRVQTLQ*LLELCT
Trigger: TGTACATAGTTCTAGTAGGCACTGCAGAGTCTGAAC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGCCAGGCTGGATGAAGTaGAGTGGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLPGWMK*SGAISA
Trigger: AGCTGAGATTGCACCACTGCACTTCATCCAGCCTGG...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGCAGAAGGGCTGCATGTaGTTCCCCATCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWQKGCM*FPIFPP
Trigger: GGGAGGGAAGATGGGGAAGCACATGCAGCCCTTCTG...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATGGCCATTCTGGACCTTaGTTCTCTCATTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: HTERPFKDCREEFAAPHHGHSGP*FSHSLL
Trigger: TAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCC...ATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp ACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCAAGGCACCGAGAATGAGCTACTCTaGAGTGTCACTGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: TQATVGAAYGIPSGHQGTENELL*SVTDLL
Trigger: CAACAGATCAGTGACACTGCAGAGTAGCTCATTCTC...GGTGCCTTGGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TGGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTGAAGCTGGGGGCCTCTaGGCCAAGCAAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: WNLNLVHHPGRTSMCLLLEAGGL*AKQGTG
Trigger: GCCTGTGCCTTGCTTGGCGCAGAGGCCCCCAGCTTC...AAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGTGGGCGTCTGGAAAGTaGAGTGGGCTGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRWASGK*SGLSGS
Trigger: GGACCCAGACAGCCCACTCCACTTTCCAGACGCCCA...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp GGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATAATGAAGGCTATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GPSKTAERSSQHPTIMKAMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...AGCCTTCATTATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTTCATAGCGCTTGAGTaGAAAGCAAGAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDFIALE*KARAPD
Trigger: GTCTGGAGCTCTTGCTTTCCACTCAAGCGCTATGAA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTAGCCTGACGTGGGGAGCCTaGGGAGGAGGGGAGATCACA +
Preference number: 4 (lower is better)
Translates to: LEKGSDTIIAHGARVLPSLTWGA*GGGEIT
Trigger: TGTGATCTCCCCTCCTCCCCAGGCTCCCCACGTCAG...GCTAGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTTGGAGGACGGCCTGACGTaGGGAGCCTGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HSFMYLEGWHKIFYKEMLEDGLT*GAWGGG
Trigger: CCCTCCTCCCCAGGCTCCCCACGTCAGGCCGTCCTC...CAACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVHSSSL*GVRRAA
Trigger: TGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATG...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGAACACAGGCCACAGTTaGGGCTGCTTATGGCATACC +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLNTGHS*GCLWHT
Trigger: GGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTT...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp AGAACATGGTGGTGGATGGGACCCAAACCCCAACTTTaGCTCCCATGTTCTCTGTCCACTGGCTATGGCTCT +
Preference number: 4 (lower is better)
Translates to: RTWWWMGPKPQL*LPCSLSTGYGS
Trigger: AGAGCCATAGCCAGTGGACAGAGAACATGGGAGCAAAAGTTGGGGTTTGGGTCCCATCCACCACCATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp CCAAGAATGGAATCTCTTTCAAAGCTGACCACACCCTaGCCTCTGCCCACCACCACCAGCAGGAAAGATAGG +
Preference number: 4 (lower is better)
Translates to: PRMESLSKLTTP*PLPTTTSRKDR
Trigger: CCTATCTTTCCTGCTGGTGGTGGTGGGCAGAGGCAAGGGTGTGGTCAGCTTTGAAAGAGATTCCATTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 72 bp ACCCACCAACATCCCAGGGCCGGAGTCTGCTTGTCTTaGACTTCTCCACTCCAGCATGGATTGCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: THQHPRAGVCLS*TSPLQHGLHFA
Trigger: AGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CAA 72 bp CACAAAACCCACCAACATCCCAGGGCCGGAGTCTGCTaGTCTTTGACTTCTCCACTCCAGCATGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: HKTHQHPRAGVC*SLTSPLQHGLH
Trigger: ATGCAATCCATGCTGGAGTGGAGAAGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGCGTCCGAGCGGCGCTaGCTGCCAGAGATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLEASERR*LPEILV
Trigger: GACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGC...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp TGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGCGCGCAGAGGCAGATaGGCGAGCAGCGTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: CFRKFKISSTFQKACEIEARRGR*ASSVRC
Trigger: GCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGC...TTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATCATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: ASSNWKNRVCSPRACIVHHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...ATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp CGAATGGATCGATTGTGTCTGTTTGGTGTAAGGCGAGCTCCAGAGCCTGGCACACAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: RMDRLCLFGVRRAPEPGTQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...TGTGCCAGGCTCTGGAGCTCGCCTTACACCAAACAGACACAATCGATCCATTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGCAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGATCTTTATGGATTGCTaGGGTTGGAGATTGAAACAG +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRIFMDC*GWRLKQ
Trigger: CTGTTTCAATCTCCAACCTCAGCAATCCATAAAGAT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTGCATATGGAGAAGCTaGGGTTTGGCAAGAACATAC +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDCIWRS*GLARTY
Trigger: GTATGTTCTTGCCAAACCTCAGCTTCTCCATATGCA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACATAGAAGGCACGGCCTaGGGAAGGGCTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDIEGTA*GRAGQG
Trigger: ACCTTGGCCAGCCCTTCCTCAGGCCGTGCCTTCTAT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAGCACGAGAACTTCATaGAGCATACACAAGTATCAA +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRSTRTS*SIHKYQ
Trigger: TTGATACTTGTGTATGCTTCATGAAGTTCTCGTGCT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACCCACCTGCCAGCTCTaGAGAGAGCAGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRPTCQL*REQQIS
Trigger: GGAGATCTGCTGCTCTCTTCAGAGCTGGCAGGTGGG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTTCCCCATCTTCCCTCCCTCCATTGCAATAATCAAGCAGCCCTACCTACATGCGCACAAATGGTGCTATaGGAGTCCTCACACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPHLPSLHCNNQAALPTCAQMVL*ESSHLE
Trigger: CTCCAGGTGTGAGGACTCTCATAGCACCATTTGTGC...GCATGTAGGTAGGGCTGCTTGATTATTGCAATGGAGGGAGGGAAGATGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTGGGCACAGTGGACTTaGCAGTGCCTTAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNWAQWT*QCLKPL
Trigger: CAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCA...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGACTCTGCAGTGTCACTaGTCTGTTGCTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLTLQCH*SVAVSC
Trigger: ACAGGAGACAGCAACAGATCAGTGACACTGCAGAGT...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGGCTGGGGAAGAGGCTTaGCATCAACTTAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLAGEEA*HQLSSH
Trigger: GTGTGAACTAAGTTGATGTCAAGCCTCTTCCCCAGC...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGAAGAATGAAAGGGAGTaGCGCTGGGGAGGATCGGCC +
Preference number: 4 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRKNERE*RWGGSA
Trigger: GGCCGATCCTCCCCAGCGGCACTCCCTTTCATTCTT...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR GCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTTCTGGCGGGGGTCCCTaGGTCCCACTGTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGSGGGP*VPLCRS
Trigger: AGACCTGCACAGTGGGACGCAGGGACCCCCGCCAGA...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR GCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYPRSVR*ARPERL
Trigger: CAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATCCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYPRSVR*ARPERL
Trigger: CAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGG...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGCCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQPRSVR*ARPERL
Trigger: CAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGG...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTGCGGGCCGAGGTCAGTaGGGTGCGCACGACCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCAGRGQ*GAHDPS
Trigger: GCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGC...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGCTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLELVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTCTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLLVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp GTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VPKHRPQLGLLMAYLVATRKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...GGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCAAATACTCAAGATCTaGAAAGGAATTTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRQILKI*KGILGW
Trigger: CCACCCCAAAATTCCTTTGCAGATCTTGAGTATTTG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAAAGCAATACAGTGCTaGCTGCAGGCTCTTACCTTA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDKAIQC*LQALTL
Trigger: TAAGGTAAGAGCCTGCAGGCAGCACTGTATTGCTTT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCGGTGCACAGAAGGGCTaGATGTGCTTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PAKADLSFQGFLESDCQSGAQKG*MCFPIF
Trigger: GAAGATGGGGAAGCACATGCAGCCCTTCTGTGCACC...GCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGCATCCTCCATCCTTTTaGCCTGAAGACTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLHPPSF*PEDWLP
Trigger: TGGAAGCCAGTCTTCAGGGCAAAAGGATGGAGGATG...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp GGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATAATGAAGGCTCTGGCAACTAAACCCTaGTGCTGTTACGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: GPSKTAERSSQHPTIMKALATKP*CCYERM
Trigger: CATTCTCTCGTAACAGCAGCAGGGTTTAGTTGCCAG...AGCCTTCATTATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACCACTCCAGCATGGATTaGATTTTGCTGCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNHSSMD*ILLLPH
Trigger: GTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTG...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACGAAGGAGGCTACAGATaGCGAGTGGGTGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNEGGYR*RVGECL
Trigger: CAGACATTCACCCACTCGCCATCTGTAGCCTCCTTC...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTCGGTGCAGCAGCCCATaGTGCCGGCGGCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCRCSSP*CRRRPS
Trigger: GCTCGGACGCCGCCGGCACCATGGGCTGCTGCACCG...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGCACCATGTTGCTTGTACACCGCGAGCTCCAGAGCCTaGCACATTATAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PESFPKAEQVPAPCCLYTASSRA*HIIEVQ
Trigger: TTGAACTTCTATAATGTGCCAGGCTCTGGAGCTCGC...GGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGATATTCACAACTTTCTaGCCTATAGGGAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRIFTTF*PIGSFT
Trigger: AGTGAAGCTCCCTATAGGCCAGAAAGTTGTGAATAT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAACAATGAGAACATATaGGCACAGGGAGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDNNENI*AQGGEH
Trigger: ATGTTCCCCTCCCTGTGCCCATATGTTCTCATTGTT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGTCCTTAGTTCTGTTGTaGATACATAAGGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRSLVLL*IHKVAT
Trigger: TGTGGCAACCTTATGTATCCACAACAGAACTAAGGA...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GAAATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTGAGAGTCCTCACACCTaGAGCCTGGTGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: EILKTLSVGRIRRCTNGAESPHT*SLVHRR
Trigger: CCTTCTGTGCACCAGGCTCCAGGTGTGAGGACTCTC...AGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp AATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCACTTATGTCCCGGGGGTaGTTGGGGCTGTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: NVKPVPTGRIEYAVQEPALMSRG*LGLCYP
Trigger: GGGGTAGCACAGCCCCAACCACCCCCGGGACATAAG...TGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGCTTAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTGCCGCTGCTGCCTCCTaGCTCCGGAGTAGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCAAAAS*LRSSPR
Trigger: GCGGGGACTACTCCGGAGTCAGGAGGCAGCAGCGGC...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCCCGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LSAQQYYAKWMLPTLSCPEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...GGGACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp ATGAGCTACTCTGCAGTGTCACTGATCTGTTGCTGTCTCCTGTCTGAAGAATCTCATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: MSYSAVSLICCCLLSEESHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...AGATTCTTCAGACAGGAGACAGCAACAGATCAGTGACACTGCAGAGTAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGATAATACAAAGGCTGTaGCCAAAATGCTCCATGATT +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRIIQRL*PKCSMI
Trigger: AATCATGGAGCATTTTGGTCACAGCCTTTGTATTAT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGGCGGCCACAGAGGATaGAGCAATGAGAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRGGHRG*SNERSL
Trigger: GAGACTCCTCTCATTGCTTCATCCTCTGTGGCCGCC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAAACTATTATCAGAGTaGACAGGCAACCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRKLLSE*TGNLQN
Trigger: ATTCTGTAGGTTGCCTGTTCACTCTGATAATAGTTT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCATCAACAAAGAGCATaGCCATGTAAACACTCCTTC +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDHQQRA*PCKHSF
Trigger: GAAGGAGTGTTTACATGGTCATGCTCTTTGTTGATG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTGGCTGTTACGAGAGAATaGGCTACTCTGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LIVGSEKGGNKRPVVFKLAVTRE*ATLQCH
Trigger: GTGACACTGCAGAGTAGCTCATTCTCTCGTAACAGC...CAGTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AKADLSFQGFLESDCQSSNAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp GGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATAATGAAGGCTAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GPSKTAERSSQHPTIMKARKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...AGCCTTCATTATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TCCATCATGAGTAAAAGCTTCCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGTGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SIMSKSFLSPFQKLSRCRCNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...CCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGGAAGCTTTTACTCATGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTCCAAAGGTCACCAATaGCAAAGACCAAAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDSKGHQ*QRPKVD
Trigger: ATCTACCTTTGGTCTTTGGCATTGGTGACCTTTGGA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTCAGTAGGCACGGCCTaGTGTGCCAAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: PTGRIEYAVQEPALSISESVGTA*CAKTQA
Trigger: GGCCTGTGTTTTGGCACAGCAGGCCGTGCCTACTGA...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATAATGAAGGCTGTGTCACTGATCTGTTaGTGTCTCCTGTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GPSKTAERSSQHPTIMKAVSLIC*CLLSEE
Trigger: TTCTTCAGACAGGAGACAGCAACAGATCAGTGACAC...AGCCTTCATTATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAATGCAGGTCTGTTTCTTaGGGAGGGGGAGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKCRSVS*GGGARR
Trigger: CCGCCTGGCTCCCCCTCCCCAAGAAACAGACCTGCA...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGTCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGGCTCTCCTTCATCCTaGGATCGCTGGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDGSPSS*DRWGSE
Trigger: TTCAGAGCCCCAGCGATCCCAGGATGAAGGAGAGCC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTGCGTCCGAGCGGCGCTaGCTGCCAGAGATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCASERR*LPEILV
Trigger: GACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGC...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAGTCTCGTTCTGTCACCCCAGGCTGGATGAAGTGCAGTGGTGCAATCTCAGCCTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: GVSFCHPRLDEVQWCNLSLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...GCTGAGATTGCACCACTGCACTTCATCCAGCCTGGGGTGACAGAACGAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp AAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTGTCCTTTCCAAAAGCTaGGCAGGTGCCGGCACCATG +
Preference number: 4 (lower is better)
Translates to: KGFWRAIAKALTSSISNSVLSKS*AGAGTM
Trigger: CATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGAC...AGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GAAATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTGAGCTTCTGGATAGCTaGACACAGGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EILKTLSVGRIRRCTNGAELLDS*TQGGSC
Trigger: ACAGGAACCTCCCTGTGTTCAGCTATCCAGAAGCTC...AGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GTGTGGAATATCCCAAATGGAGTAGAAACGCTGGGCTTCAGAGGCAGACCCTGCCAGCTTCATGTATCTTaGGGGCTGGCACAAGATATT +
Preference number: 4 (lower is better)
Translates to: VWNIPNGVETLGFRGRPCQLHVS*GLAQDI
Trigger: AATATCTTGTGCCAGCCCTCAAGATACATGAAGCTG...GCAGGGTCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp CCTTGCCTCTGCCCACCACCACCAGCAGGAAAGATAGGCCAGCTTGAAGGCAAAGTTGAGTCTTACTGTTaGATGTGTCTGGCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: PCLCPPPPAGKIGQLEGKVESYC*MCLAKF
Trigger: AAACTTAGCCAGACACATTCAACAGTAAGACTCAAC...TTTGCCTTCAAGCTGGCCTATCTTTCCTGCTGGTGGTGGTGGGCAGAGGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGCTGTCGTTCTCAGCCTaGGAGCCGGGGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQLSFSA*EPGEDA
Trigger: TGCATCCTCCCCCGGCTCTCAGGCTGAGAACGACAG...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGTCACCTTGGTGTTGCTaGCAATTTGCAGGAACTCTT +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVSPWCC*QFAGTL
Trigger: AAGAGTTCCTGCAAATTGTCAGCAACACCAAGGTGA...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp AATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCACCCTGCGTCCCACTGTaGAGGTCTGTTTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NVKPVPTGRIEYAVQEPAPCVPL*RSVSWG
Trigger: TCCCCAAGAAACAGACCTGCACAGTGGGACGCAGGG...TGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGCTTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACTCGTCCTCCGCCGCTaGTGCCTCCTGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLLVLRR*CLLTPE
Trigger: CTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGCATACACAAAACCCACCAACATCCCAGGGCCGGAGTCTGCTTGTCTTTGACTAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GIHKTHQHPRAGVCLSLTRKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...AGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGTTTTGTGTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp TCCATCATGAGTAAAAGCTTCCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGTCTCCTGAGGTTCTCTaGATCACTGACTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SIMSKSFLSPFQKLSRCRSPEVL*ITDSSF
Trigger: GAACGAGGAGTCAGTGATGCAGAGAACCTCAGGAGA...CCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGGAAGCTTTTACTCATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAGATTAACGGGTAATTaGCAAGTATTACTGTACAAC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRRLTGN*QVLLYN
Trigger: GTTGTACAGTAATACTTGGCAATTACCCGTTAATCT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATACCAGTACCAGCCACTaGAAAAACATTCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDTSTSH*KNIPKC
Trigger: ACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAATGAGCTTTGCTTGTaGCATAGAAACAAATTAAGC +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRNELCL*HRNKLS
Trigger: GCTTAATTTGTTTCTATGGCACAAGCAAAGCTCATT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGAATTACTGACGCTTTaGCCTTTTAGCCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDELLTL*PFSHFG
Trigger: TCCAAAATGGCTAAAAGGGCAAAGCGTCAGTAATTC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACTCAGAGCCCGGCTTGTaGAGAGCCCTATTGGGGATT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDSEPGL*RALLGI
Trigger: AATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGA...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp AACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTATGAGAGTCCTGGCCGAATCCGTCGTTaGACAAATGGTGCTATGAGA +
Preference number: 4 (lower is better)
Translates to: NLVSRPNPSLHKWCYESPGRIRR*TNGAMR
Trigger: TCTCATAGCACCATTTGTGCAACGACGGATTCGGCC...AGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp ACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCACCAAGGCACCATCTTCTTTCCAGTTTaGAAGGACAGGCATTTATCT +
Preference number: 4 (lower is better)
Translates to: TQATVGAAYGIPSGHQGTIFFPV*KDRHLS
Trigger: AGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGAT...GGTGCCTTGGTGGCCACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACGGCCATTCTGGACCTTaGTTCTCTCATTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNGHSGP*FSHSLL
Trigger: TAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCC...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGCAGTCCAAGAGCCTaGATTGTCCATATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLCSPRA*IVHIRV
Trigger: AACTCTGATATGGACAATGCAGGCTCTTGGACTGCA...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACGCAACTAAACCCTGCTaGTGTTACGAGAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNATKPC*CYERMS
Trigger: GCTCATTCTCTCGTAACAGCAGCAGGGTTTAGTTGC...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGAAAGGGAGTGCCGCTaGGGAGGATCGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGERECR*GGSACL
Trigger: TAGACAGGCCGATCCTCCCCAGCGGCACTCCCTTTC...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAAGTGGAGTGGGCTGTCTaGGTCCGGGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKVEWAV*VRVCVC
Trigger: ACACACACACACCCGGACCCAGACAGCCCACTCCAC...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGTCTGGAAAGTGGAGTaGGCTGTCTGGGTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGVWKVE*AVWVRV
Trigger: CACCCGGACCCAGACAGCCCACTCCACTTTCCAGAC...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp TCCATCATGAGTAAAAGCTTCCTGAGTCCTTTCCAAAAGCTGAGCAGGTGCCGGATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SIMSKSFLSPFQKLSRCRMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...CCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGGAAGCTTTTACTCATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCAGCAGCCGCATTTCTaGTTCAATGTCATTACTTAT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDQQPHF*FNVITY
Trigger: ATAAGTAATGACATTGAACCAGAAATGCGGCTGCTG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGGCCTGAGGAAGGGCTaGCCAAGGTTTACAAGACTC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRGLRKG*PRFTRL
Trigger: GAGTCTTGTAAACCTTGGCCAGCCCTTCCTCAGGCC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGAACAAAATACTTAGATaGCTAGCCAGGCTAATAAAG +
Preference number: 4 (lower is better)
Translates to: ALASIWQVPLWDTASRSRNKILR*LARLIK
Trigger: CTTTATTAGCCTGGCTAGCCATCTAAGTATTTTGTT...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCTCTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTTCTGTCACCCCAGGCTaGATGAAGTGCAGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLEKGSDTIIAHGARVLPSVTPG*MKCSGA
Trigger: TGCACCACTGCACTTCATCCAGCCTGGGGTGACAGA...AGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CCTTGCCTCTGCCCACCACCACCAGCAGGAAAGATAGGCCAGCTTGAAGGCAAAACTGTTGAATGTGTCTaGCTAAGTTTTTGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PCLCPPPPAGKIGQLEGKTVECV*LSFCLP
Trigger: TGGGAGACAAAAACTTAGCCAGACACATTCAACAGT...TTTGCCTTCAAGCTGGCCTATCTTTCCTGCTGGTGGTGGTGGGCAGAGGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CCTGCTGTGCCAAAACACAGGCCACAGTTGGGGCTGCTTATGGCATACCTAGTGGCCTTTGAAAAAGTATaGCCATTCTGGACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PAVPKHRPQLGLLMAYLVAFEKV*PFWTLL
Trigger: AAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGC...CACTAGGTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTTTGGCACAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCTGTCCCGGGGGTGGTTaGGGCTGTGCTACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIICPGGG*GCATPF
Trigger: GAAGGGGGTAGCACAGCCCCAACCACCCCCGGGACA...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TTTCTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGACAGGCGGTGGAGAGTaGGGATGCTCCCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLYASGSLKSPPPFRRHVTGGGE*GCSLSP
Trigger: GGGGCTCAGGGAGCATCCCCACTCTCCACCGCCTGT...CACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CAA 72 bp GCTGCTTCTTCAGAGAGGTGTTTTCTGGCCACCCTATaGAAGGTAGGGCACCATGATCTCACATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AASSERCFLATL*KVGHHDLTSFS
Trigger: GGAAAAGGATGTGAGATCATGGTGCCCTACCTTCAATAGGGTGGCCAGAAAACACCTCTCTGAAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR CAA 72 bp AATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTaGCACAAATGGTGCTATGAGAGTCCTCACACCTGG +
Preference number: 4 (lower is better)
Translates to: NPQNLVSRPNPS*HKWCYESPHTW
Trigger: CCAGGTGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 72 bp TCCCCAGCCAAAGCTGACTTGAGTTTCCAAGGGTTTTaGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SPAKADLSFQGF*ESDCQSSYLQH
Trigger: ATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 72 bp GCTCACGGTGCCAGGGTTCTTCCTAGCCCATTTGTGTaGAAACCATATAGAACTGCTTGTCTCTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: AHGARVLPSPFV*KPYRTACLCSS
Trigger: GGAACTGCAGAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGCACCGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTCATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAACATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCCATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAAGTCCTTTCCAAAAGCTaGGCAGGTGCCGGCACCATG +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKVLSKS*AGAGTM
Trigger: CATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGAC...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp CGAATGGATCGATTGTGTCTGTTTGGTGTAAGGCGAGCTCCAGAGCCTGGCACAGAGGTGCTACAACACTaGAAATGGGAAATTCACATG +
Preference number: 4 (lower is better)
Translates to: RMDRLCLFGVRRAPEPGTEVLQH*KWEIHM
Trigger: CATGTGAATTTCCCATTTTCAGTGTTGTAGCACCTC...TGTGCCAGGCTCTGGAGCTCGCCTTACACCAAACAGACACAATCGATCCATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGCTCTTCATAGCGCTTaGGTGGAAAGCAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRALHSA*VESKSS
Trigger: GGAGCTCTTGCTTTCCACTCAAGCGCTATGAAGAGC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGCTGAGGTTGGAGATTaGAACAGTTATAACTTCATA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDAEVGD*NSYNFI
Trigger: TATGAAGTTATAACTGTTTCAATCTCCAACCTCAGC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACCACAAGTGGGTCCCTaGCCCCCATGCCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIPQVGP*PPCLLM
Trigger: CATCAGGAGGCATGGGGGTCAGGGACCCACTTGTGG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATAGACTTATTCATGAATaGAGAAGAAACATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDRLIHE*RRNMSQ
Trigger: CTGGGACATGTTTCTTCTTCATTCATGAATAAGTCT...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGCCTGAAATAACTTTGTaGTCCCGAAGAGATGTCCAA +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVPEITL*SRRDVQ
Trigger: TTGGACATCTCTTCGGGATCACAAAGTTATTTCAGG...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp ATCAACTTAGTTCACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGTGCTACCCCCTTCCTaGAATAACTTTGTGATCCCG +
Preference number: 4 (lower is better)
Translates to: INLVHTERPFKDCREEFAVLPPS*NNFVIP
Trigger: CGGGATCACAAAGTTATTTCAGGAAGGGGGTAGCAC...TGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTGAACTAAGTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLPSGAD*QRSSSS
Trigger: GGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATCTCCCAGGTTGGAGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRSPRLE*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACTCCAACCTGGGAGA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTGTGGAATATCCCAAATGGAGTAGAAACGCTGGGCTTCAGAGGCAGACCCTGCAGAACTGCTTGTCTCTaGAGTTCCCAAGAACAACTT +
Preference number: 4 (lower is better)
Translates to: VWNIPNGVETLGFRGRPCRTACL*SSQEQL
Trigger: AAGTTGTTCTTGGGAACTGCAGAGACAAGCAGTTCT...GCAGGGTCTGCCTCTGAAGCCCAGCGTTTCTACTCCATTTGGGATATTCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNGTLTW*IILAEQ
Trigger: TTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCC...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GTGACTTTAGGACAACAAGAACCTTCTCTGTGCCTAGCACTCTCCCTGTCGTTCGGCCATTCTGGACCTTaGTTCTCTCATTCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: VTLGQQEPSLCLALSLSFGHSGP*FSHSLL
Trigger: TAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCC...GAACGACAGGGAGAGTGCTAGGCACAGAGAAGGTTCTTGTTGTCCTAAAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp CTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTGGAGAATGAGCTACTCTaGAGTGTCACTGATCTGTTG +
Preference number: 4 (lower is better)
Translates to: LIVGSEKGGNKRPVVFKLENELL*SVTDLL
Trigger: CAACAGATCAGTGACACTGCAGAGTAGCTCATTCTC...CAGTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTGCATCATCCTGCAAGAACCTTCTCTGTaGCTAGCACTCTCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: KDRHLSQPSGTLTWCIILQEPSL*LALSLS
Trigger: CGACAGGGAGAGTGCTAGGCACAGAGAAGGTTCTTG...CAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp CTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATGAAAGGGAGTGCCGCTaGGGAGGATCGGCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LLSFPSIIIFFPVCKDRHERECR*GGSACL
Trigger: TAGACAGGCCGATCCTCCCCAGCGGCACTCCCTTTC...ATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGGTGGAGTGGGCTGTCTaGGTCCGGGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQVEWAV*VRVCVC
Trigger: ACACACACACACCCGGACCCAGACAGCCCACTCCAC...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp AAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTGCATCATCCTGGGAGTATGTAGGAGGTaGGCGTCTGGAAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KDRHLSQPSGTLTWCIILGVCRR*ASGKWS
Trigger: ACTCCACTTTCCAGACGCCCACCTCCTACATACTCC...CAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGCCATAATATCGTTCTaGGTTTTAAGAAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDAIISF*VLRSQE
Trigger: TTCCTGACTTCTTAAAACCCAGAACGATATTATGGC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCCAAGAACATGGTGGTaGATGGGACCCAAACCCCAA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDPRTWW*MGPKPQ
Trigger: TTGGGGTTTGGGTCCCATCCACCACCATGTTCTTGG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTTAGGACAATCTTTATaGATTGCTGAGGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: KALAPPIRARLVQSPIGDLGQSL*IAEVGD
Trigger: ATCTCCAACCTCAGCAATCCATAAAGATTGTCCTAA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGACAATCCCCAAGAGTCTaGAGGGTCTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: REAHGTNEMLNVKPVPTGQSPRV*RVWKSP
Trigger: GGGAGACTTCCAGACCCTCCAGACTCTTGGGGATTG...TCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGCAATACTATGCAAAATaGATGCTTCCCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLEVSPTLSRILILPHCGQYYAK*MLPTLS
Trigger: GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTG...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAACTTATGTCCCGGGGGTaGTTGGGGCTGTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: LYASGSLKSPPPFRRHVKLMSRG*LGLCYP
Trigger: GGGGTAGCACAGCCCCAACCACCCCCGGGACATAAG...TTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTGTATTTCAGAGGTAGCTaGCAACTAAACCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LIVGSEKGGNKRPVVFKLYFRGS*QLNPAA
Trigger: AGCAGCAGGGTTTAGTTGCCAGCTACCTCTGAAATA...CAGTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp ATCACACTGAATGGGCAAAAACTGGAAGCACTCCCTTaGAAAACTGGCGCAAGACAAGGGTGGCTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ITLNGQKLEALP*KTGARQGWLVS
Trigger: TGAGACAAGCCACCCTTGTCTTGCGCCAGTTTTCAAAGGGAGTGCTTCCAGTTTTTGCCCATTCAGTGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGAGTGCTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: GSLPNSVSDPHSSSLWGVLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...CACTCCCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
CDS-3UTR TCA 90 bp ATGAGAAAAGGTCTAGTTGGTCCCTCAATGTGTAATTACGACACTTCGAATGGAGTCCTTTCCAAAAGCTaGGCAGGTGCCGGCACCATG +
Preference number: 4 (lower is better)
Translates to: MRKGLVGPSMCNYDTSNGVLSKS*AGAGTM
Trigger: CATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGAC...TCCATTCGAAGTGTCGTAATTACACATTGAGGGACCAACTAGACCTTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp TGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGCAGCCAAAGCTGACTTaGGTTTCCAAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: WRAIAKALTSSISNSLPVQPKLT*VSKGFW
Trigger: CCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTG...CACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GCCAGGGTTCTTCCTAGCCCATTTGTGTTGAAACCATATAGAACTGCTTGTCTCCAGCTTGAAGGCAAATaGGGAGAGCAGTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: ARVLPSPFVLKPYRTACLQLEGK*GEQCCS
Trigger: TGAACAGCACTGCTCTCCTCATTTGCCTTCAAGCTG...GAGACAAGCAGTTCTATATGGTTTCAACACAAATGGGCTAGGAAGAACCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTAAAGATAGGCCAGCTTaGAGGCAAATGAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: AKADLSFQGFLESDCQSSKDRPA*RQMRRA
Trigger: TGCTCTCCTCATTTGCCTTCAAGCTGGCCTATCTTT...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GTCTTTGACTTCTCCACTCCAGCATGGATTGCATTTTGCTGCTCCCCCACAATAGAGGGCAACTTGTTTTaGCAAACACTGAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: VFDFSTPAWIAFCCSPTIEGNLF*QTLRAI
Trigger: GATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCCTC...TATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTCAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGGCTGTTACGAGAGAATaGGCTACTCTGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWAVTRE*ATLQCH
Trigger: GTGACACTGCAGAGTAGCTCATTCTCTCGTAACAGC...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTCCCTGCGTCCCACTGTaGAGGTCTGTTTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLPCVPL*RSVSWG
Trigger: TCCCCAAGAAACAGACCTGCACAGTGGGACGCAGGG...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR GCA 90 bp AAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTTGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KGFWRAIAKALTSSISNSCNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...AGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CAATCTCAGCTCACTGCAACATCTGTCTCCAGGATTCAGATGACTCTCCTGCCTGCAGCCCTACCTACATaGTGGGTCTTTCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: QSQLTATSVSRIQMTLLPAALPT*WVFPFL
Trigger: TAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGC...AGGCAGGAGAGTCATCTGAATCCTGGAGACAGATGTTGCAGTGAGCTGAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTCTTCCCTCCCTCCATTaGAATAATCAAGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: AKADLSFQGFLESDCQSSLPSLH*NNQAAL
Trigger: TAGGGCTGCTTGATTATTGCAATGGAGGGAGGGAAG...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACTGTGCTCAGCAATACTATaGAAAATGGATGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LIVGSEKGGNKRPVVFKLCSAIL*KMDASH
Trigger: GTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCA...CAGTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCAAGTGCCTTAAACCGTTaGTTATGTCCCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NVKPVPTGRIEYAVQEPASALNR*LCPGGG
Trigger: ACCACCCCCGGGACATAAGCAACGGTTTAAGGCACT...TGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGCTTAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATAGGCACGGCCTGCTGTaGCAAAACACAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYRHGLL*QNTGHS
Trigger: ACTGTGGCCTGTGTTTTGGCACAGCAGGCCGTGCCT...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTTCTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGGGTGGAGAGTGGGGATaGTCCCTGAGCCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: FLYASGSLKSPPPFRRHVGGEWG*SLSPKQ
Trigger: TTGCTTGGGGCTCAGGGAGCATCCCCACTCTCCACC...CACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTTCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CCA 90 bp ATGAGAAAAGGTCTAGTTGGTCCCTCAATGTGTAATTACGACACTTCGAATGGATCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: MRKGLVGPSMCNYDTSNGSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...TCCATTCGAAGTGTCGTAATTACACATTGAGGGACCAACTAGACCTTTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp CTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LLSFPSIIIFFPVCKDRHSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...ATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGACTGCTTCCACAAGTaGGTCCCTGACCCCCATGCC +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIDCFHK*VPDPHA
Trigger: GGCATGGGGGTCAGGGACCCACTTGTGGAAGCAGTC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGAAGTTCAGTCTGAGTaGAGCCCACTGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYEVQSE*SPLQRC
Trigger: GCAGCGCTGCAGTGGGCTCCACTCAGACTGAACTTC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGATTCCCAGGCAAGATaGCCGAATAGGAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDDSQAR*PNRNSC
Trigger: ACAGCTGTTCCTATTCGGCCATCTTGCCTGGGAATC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTAGTTTGGAGAGCTTCTaGATAGCTGAACACAGGGAG +
Preference number: 4 (lower is better)
Translates to: AKADLSFQGFLESDCQSSSLESF*IAEHRE
Trigger: CTCCCTGTGTTCAGCTATCCAGAAGCTCTCCAAACT...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGTATTTAAAAATTAACTaGGGTTCTCCAGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLYLKIN*GSPERA
Trigger: GGCCCTCTCTGGAGAACCCCAGTTAATTTTTAAATA...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp ATTGCAATAATCAAGCAGCCCTACCTACATGCTGGGTCTTTCCATTTTTATCGACTCACACCTGGAGCCTaGTGCACAGAAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IAIIKQPYLHAGSFHFYRLTPGA*CTEGLH
Trigger: ATGCAGCCCTTCTGTGCACCAGGCTCCAGGTGTGAG...TCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVHSSSL*GVRRAA
Trigger: TGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATG...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp AGGCATGTAGAGTGTTCAATTTCAAGAGACTCAATTCCAAAATTTATGTGCCTTTGTCCCGGGGGTGGTTaGGGCTGTGCTACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RHVECSISRDSIPKFMCLCPGGG*GCATPF
Trigger: GAAGGGGGTAGCACAGCCCCAACCACCCCCGGGACA...AAGGCACATAAATTTTGGAATTGAGTCTCTTGAAATTGAACACTCTACATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTCATGTACACAGTCTGTaGAATGCTTATGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSHVHSL*NAYDRG
Trigger: ACCTCTGTCATAAGCATTCCACAGACTGTGTACATG...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTATCGAGGTCTGTACTaGATGGTCCCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: PTGRIEYAVQEPALSISEYRGLY*MVPNKP
Trigger: GGGTTTGTTTGGGACCATTCAGTACAGACCTCGATA...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp TTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTATGAGAGTCCTCACAATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: LSVGRIRRCTNGAMRVLTMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...TGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp ATGAGAAAAGGTCTAGTTGGTCCCTCAATGTGTAATTACGACACTTCGAATGGAGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTT +
Preference number: 4 (lower is better)
Translates to: MRKGLVGPSMCNYDTSNGEAALF*HNQAHV
Trigger: AACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTC...TCCATTCGAAGTGTCGTAATTACACATTGAGGGACCAACTAGACCTTTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTCAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp CAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTGGAGGGGCTATTACACTGTaGTTTTCTTGTTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: QLVLTNTEGNPQESGGSGGAITL*FSCSVI
Trigger: TATCACGGAACAAGAAAATCACAGTGTAATAGCCCC...TCCAGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCAAGAATGAAAGGGAGTaGCGCTGGGGAGGATCGGCC +
Preference number: 4 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIIKNERE*RWGGSA
Trigger: GGCCGATCCTCCCCAGCGGCACTCCCTTTCATTCTT...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLNAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTTGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGCNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACCAAACCCCAACTTTTaGTCCCATGTTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRPNPNF*SHVLCP
Trigger: TGGACAGAGAACATGGGAGCAAAAGTTGGGGTTTGG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACCCAGCTTCCTGCGGTaGTGCACGAGGTCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLPSFLR*CTRSAE
Trigger: TTCTGCTGACCTCGTGCAGCACCGCAGGAAGCTGGG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAGCCATGAGGGACCATaGCGTGAGTGGGGGTGCACT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCSHEGP*REWGCT
Trigger: AGTGCACCCCCACTCACGGCATGGTCCCTCATGGCT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACGAACAGGTGTTGGTTaGAGAGGGCAAATTCAAGGA +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRRTGVG*RGQIQG
Trigger: TCCTTGAATTTGCCCTCTGCAACCAACACCTGTTCG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GAAATCCTCAAAACCTTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTTTTTTGGAGAGCGATTaGCAAAGCTCTTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: EILKTLSVGRIRRCTNGAFLESD*QSSYLQ
Trigger: CTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAA...AGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTAATGGGACCAATGAAATaGTCAATGTTAAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLMGPMK*SMLSQF
Trigger: GAACTGGCTTAACATTGAGCATTTCATTGGTCCCAT...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACAGTGCCTTAAACCGTTaGTTATGTCCCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RIEYAVQEPALSISEFTNSALNR*LCPGGG
Trigger: ACCACCCCCGGGACATAAGCAACGGTTTAAGGCACT...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCAGGCACGGCCTGCTGTaGCAAAACACAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: FYNHLLSSLQGQAFISAIRHGLL*QNTGHS
Trigger: ACTGTGGCCTGTGTTTTGGCACAGCAGGCCGTGCCT...GATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675749.1
CDS-3UTR GCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCTCAGTAGGCACGGCCTaGTGTGCCAAAACACAGGCC +
Preference number: 4 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIISVGTA*CAKTQA
Trigger: GGCCTGTGTTTTGGCACAGCAGGCCGTGCCTACTGA...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGGCAACTAAACCCTGCTaGTGTTACGAGAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: PTGRIEYAVQEPALSISEATKPC*CYERMS
Trigger: GCTCATTCTCTCGTAACAGCAGCAGGGTTTAGTTGC...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCAGGCCCTTCAAAGACTaGAGAGAGGAGTTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSRPFKD*REEFAA
Trigger: TGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCT...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACTCGTCCATCATGCCATaGGCTGAGGGAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHSSIMP*AEGGST
Trigger: AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGA...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGCACAGTCTAGCCTCTaGAAGGAATGTCAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYAQSSL*KECQAG
Trigger: ACCCGCCTGACATTCCTTCCAGAGGCTAGACTGTGC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGCAGCCTCTAATTCCTaGGCTCAAGTAATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDAASNS*AQVIFP
Trigger: AGGGAAGATTACTTGAGCCCAGGAATTAGAGGCTGC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATGGCAGGTGCCCCTCTaGGACACAGCTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIWQVPL*DTASRS
Trigger: ACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATACTGGCAAGTAGTGTaGCACGAAGGAGGTCATCTA +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRYWQVV*HEGGHL
Trigger: TAGATGACCTCCTTCGTGCCACACTACTTGCCAGTA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCCAGTGGTCTTCAAACTaGAGAAGGTGTGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVQWSSN*RRCAPS
Trigger: ACTTGGGGCACACCTTCTCCAGTTTGAAGACCACTG...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCCATTCTTCCTCATTGTaGGGAGTGAGAAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSHSSSL*GVRRAA
Trigger: TGCCGCCCTTCTCACTCCCCACAATGAGGAAGAATG...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGCAATCCCCAAGAGTCTaGAGGGTCTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQQSPRV*RVWKSP
Trigger: GGGAGACTTCCAGACCCTCCAGACTCTTGGGGATTG...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp CCTCAATGTGTAATTACGACACTTCGAATGGATCGATaGTGTCTGTTTGGTGTAAGGCGAGCTCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PQCVITTLRMDR*CLFGVRRAPEP
Trigger: AGGCTCTGGAGCTCGCCTTACACCAAACAGACACAATCGATCCATTCGAAGTGTCGTAATTACACATTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
3UTR CAA 72 bp AATGTTAGTCAGGTCCTGAGCAAGAGGGGGCTTATTTaGTCCATTTGCTCCTTCATCCAGAGCCCTAACTAC +
Preference number: 4 (lower is better)
Translates to: NVSQVLSKRGLI*SICSFIQSPNY
Trigger: GTAGTTAGGGCTCTGGATGAAGGAGCAAATGGACAAAATAAGCCCCCTCTTGCTCAGGACCTGACTAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp ATAGCTAATGTGTACCCTTCCCCAGCCAAAGCTGACTaGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAA +
Preference number: 4 (lower is better)
Translates to: IANVYPSPAKAD*SFQGFLESDCQ
Trigger: TTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGGGGAAGGGTACACATTAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp ATCAACTTAGTTCACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: INLVHTERPFKDCREEFAMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...TGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTGAACTAAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTACATCATGCCATGGGCTaGGGGAGGCAGCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVHHAMG*GRQHSS
Trigger: AGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATG...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTTGCCCTGAAGACTGGCTTCCAAAGATTCTTACTGTGCTTCATAGAAGATGACCAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: FALKTGFQRFLLCFIEDDQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...GTCATCTTCTATGAAGCACAGTAAGAATCTTTGGAAGCCAGTCTTCAGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGGTACACTCGACTGTTaGAGTTTGATTGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRGTLDC*SLIVDV
Trigger: CACATCCACAATCAAACTTCAACAGTCGAGTGTACC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAAGATCTTGTGGAGGATaGCAACTTCCCACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRRSCGG*QLPTEK
Trigger: TTTCTCTGTGGGAAGTTGTCATCCTCCACAAGATCT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGGATCGCTGGGGCTCTaGAACTGGAAGAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYGSLGL*NWKKKS
Trigger: GCTTTTCTTCTTCCAGTTTCAGAGCCCCAGCGATCC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTAATCTCTTTCAAAGCTaGCCACACCCTTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PTASCILRAGTRYFIRRCNLFQS*PHPCLC
Trigger: GCAGAGGCAAGGGTGTGGTCAGCTTTGAAAGAGATT...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACGTGCTACCCCCTTCCTaGAATAACTTTGTGATCCCG +
Preference number: 4 (lower is better)
Translates to: RIEYAVQEPALSISEFTNVLPPS*NNFVIP
Trigger: CGGGATCACAAAGTTATTTCAGGAAGGGGGTAGCAC...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATTGGGCACAGTGGACTTaGCAGTGCCTTAAACCGTTG +
Preference number: 4 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYWAQWT*QCLKPL
Trigger: CAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCA...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp AAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTGCATCATCCTGCCGTCTTCGCCTTTCTaGGTCCAGTTAATTGTATTC +
Preference number: 4 (lower is better)
Translates to: KDRHLSQPSGTLTWCIILPSSPF*VQLIVF
Trigger: GAATACAATTAACTGGACTCAGAAAGGCGAAGACGG...CAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAATGCTGAGACCAACTaGAGCGCGCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHINAETN*SAQRQM
Trigger: CATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCCTCTTGAAACTGGCTaGCTCCCTTATTTAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDPLETG*LPYLGL
Trigger: TAGACCTAAATAAGGGAGGCAGCCAGTTTCAAGAGG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCAGAGTTGTCTGGAATaGCAGAGAGACAGAACCATT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDQSCLE*QRDRTI
Trigger: AATGGTTCTGTCTCTCTGGCATTCCAGACAACTCTG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAACTCCCCAAGCTTTTTaGACAAGACAGATGGTCACT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRTPQAF*TRQMVT
Trigger: AGTGACCATCTGTCTTGTGCAAAAAGCTTGGGGAGT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ATGAGCTACTCTGCAGTGTCACTGATCTGTTGCTGTCTCCTGTCTGAAGAATCTACTATGCAAAATGGATaGTTCCCACTCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MSYSAVSLICCCLLSEESTMQNG*FPLCPV
Trigger: GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGT...AGATTCTTCAGACAGGAGACAGCAACAGATCAGTGACACTGCAGAGTAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGTGCAGTCCAAGAGCCTaGATTGTCCATATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWCSPRA*IVHIRV
Trigger: AACTCTGATATGGACAATGCAGGCTCTTGGACTGCA...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAAGAGATGATGCCCAAGTaGCAGCTTTATCACTATTTA +
Preference number: 4 (lower is better)
Translates to: FLIVGSEKGGNKRPVVFKEMMPK*QLYHYL
Trigger: TAAATAGTGATAAAGCTGGCACTTGGGCATCATCTC...TTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTATTCCATCATTGTTCCTaGTATGTAGGTATTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLFHHCS*YVGIRL
Trigger: AAGCCTAATACCTACATAGCAGGAACAATGATGGAA...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TGGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTTGGATTGCATTTTGCTaGTCCCCCACAATACCATCC +
Preference number: 4 (lower is better)
Translates to: WNLNLVHHPGRTSMCLLLWIAFC*SPTIPS
Trigger: GGATGGTATTGTGGGGGAGCAGCAAAATGCAATCCA...AAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGGAGTATGTAGGAGGTaGGCGTCTGGAAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLEGVCRR*ASGKWS
Trigger: ACTCCACTTTCCAGACGCCCACCTCCTACATACTCC...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGAAGGAGGCTACAGATaGCGAGTGGGTGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLEEGGYR*RVGECL
Trigger: CAGACATTCACCCACTCGCCATCTGTAGCCTCCTTC...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PTASCILRAGTRYFIRRCMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAAATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGCTAACCAGTCAAACTaGGTCCAAAGTCACCATTCT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRANQSN*VQSHHS
Trigger: AGAATGGTGACTTTGGACCCAGTTTGACTGGTTAGC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATCTGCAATTACATCATaGTTACCCAGGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRSAITS*LPRHSL
Trigger: AAGGGAGTGCCTGGGTAACCATGATGTAATTGCAGA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTTGCCCTGAAGACTGGCTTCCAAAGATTCTTACTGTGCTTCATAGAAGATGACCCGTCGTTGCACAAATaGTGCTATGAGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FALKTGFQRFLLCFIEDDPSLHK*CYESPH
Trigger: GTGAGGACTCTCATAGCACCATTTGTGCAACGACGG...GTCATCTTCTATGAAGCACAGTAAGAATCTTTGGAAGCCAGTCTTCAGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CCTCTAGAAAAAGGTAGTGACACTATTATTGCTCACGGTGCCAGGGTTCTTCCTGTGGAATATCCCAAATaGAGTAGAAACGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLEKGSDTIIAHGARVLPVEYPK*SRNAGL
Trigger: AAGCCCAGCGTTTCTACTCCATTTGGGATATTCCAC...AGGAAGAACCCTGGCACCGTGAGCAATAATAGTGTCACTACCTTTTTCTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACCAGTGGTCTTCAAACTaGAGAAGGTGTGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RIEYAVQEPALSISEFTNQWSSN*RRCAPS
Trigger: ACTTGGGGCACACCTTCTCCAGTTTGAAGACCACTG...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp TGGCAAGAACATACAGTGCATGTAGTGACCATGTCTTaGCTGAAAACCCTACTGGATACGCACAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: WQEHTVHVVTMS*LKTLLDTHNAE
Trigger: CTCTGCATTGTGCGTATCCAGTAGGGTTTTCAGCAAAGACATGGTCACTACATGCACTGTATGTTCTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp ATGGGAAGCAAGTTTGTTTTGAGTGTGGGCAAGATCTaGTGGAGGATGACAACTTCCCACAGAGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: MGSKFVLSVGKI*WRMTTSHRESM
Trigger: CATGCTTTCTCTGTGGGAAGTTGTCATCCTCCACAAGATCTTGCCCACACTCAAAACAAACTTGCTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAATATCGAGGTCTGTACTaGATGGTCCCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKYRGLY*MVPNKP
Trigger: GGGTTTGTTTGGGACCATTCAGTACAGACCTCGATA...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATCAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp TGGACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGCAACGATGCAGCCTGTaGCAGAGACGTACGTGTAAT +
Preference number: 4 (lower is better)
Translates to: WTLLLSFPSIIIFFPVCKQRCSL*QRRTCN
Trigger: ATTACACGTACGTCTCTGTCACAGGCTGCATCGTTG...CTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGACCAAAATGCTCCATaGTTCGTGGGAAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYDQNAP*FVGKPG
Trigger: TCCTGGCTTTCCCACGAATCATGGAGCATTTTGGTC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAATGAGCTTGGAGGAATaGAGGCAAACTTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRMSLEE*RQTLSH
Trigger: ATGTGACAAAGTTTGCCTTCATTCCTCCAAGCTCAT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACTTAGAGCCAGCCTCTTaGAACTGGCTGCCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHLEPAS*NWLPPL
Trigger: TAAGGGAGGCAGCCAGTTTCAAGAGGCTGGCTCTAA...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCTCTTAAGTGGGAGTTaGACAATGAGAACATATGGG +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDLLSGS*TMRTYG
Trigger: CCCATATGTTCTCATTGTTCAACTCCCACTTAAGAG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAACTAGAAATACCATTTaGTCCAGCAATCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRTRNTI*SSNPLL
Trigger: CAGTAGGGGATTGCTGGATCAAATGGTATTTCTAGT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATGGGCAGGGCATCTCTaGAAGAAAGCCAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVWAGHL*KKASSP
Trigger: AGGGCTACTGGCTTTCTTTCAGAGATGCCCTGCCCA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACTCGACTGTTGAAGTTTaGTTGTGGATGTGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDSTVEV*LWMCVY
Trigger: GTACACACACATCCACAATCAAACTTCAACAGTCGA...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGATGGCCATGAGCACTaGACAAATGAGGAAAGAATA +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRDGHEH*TNEERI
Trigger: TATTCTTTCCTCATTTGTTCAGTGCTCATGGCCATC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ATTGCAATAATCAAGCAGCCCTACCTACATGCTGGGTCTTTCCATTTTTATCGACTGGTCTTGAATTCCTaGCTTCAAGTGATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IAIIKQPYLHAGSFHFYRLVLNS*LQVIPL
Trigger: CAGGGGGATCACTTGAAGTCAGGAATTCAAGACCAG...TCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGTTTATAAGGAGATGTTaGGTGTCTCCATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWFIRRC*VSPFPH
Trigger: ATGTGGAAATGGAGACACTCAACATCTCCTTATAAA...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp AGATGTCCAAGCAGGGAGATGATGCCCAAGTGCCAGCTTTATCACTATTTATGGCCTGAAATAACTTTGTaGTCCCGAAGAGATGTCCAA +
Preference number: 4 (lower is better)
Translates to: RCPSREMMPKCQLYHYLWPEITL*SRRDVQ
Trigger: TTGGACATCTCTTCGGGATCACAAAGTTATTTCAGG...CCATAAATAGTGATAAAGCTGGCACTTGGGCATCATCTCCCTGCTTGGACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: KGFWRAIAKALTSSISNSRKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...AGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHICNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCTGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FYNHLLSSLQGQAFISAICNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...GATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
CDS-3UTR GCA 90 bp ATGAGCTACTCTGCAGTGTCACTGATCTGTTGCTGTCTCCTGTCTGAAGAATCTTGCTCAGCAATACTATaGAAAATGGATGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: MSYSAVSLICCCLLSEESCSAIL*KMDASH
Trigger: GTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCA...AGATTCTTCAGACAGGAGACAGCAACAGATCAGTGACACTGCAGAGTAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCCCGAGATGATGCCCAAGTaGCAGCTTTATCACTATTTA +
Preference number: 4 (lower is better)
Translates to: LSAQQYYAKWMLPTLSCPEMMPK*QLYHYL
Trigger: TAAATAGTGATAAAGCTGGCACTTGGGCATCATCTC...GGGACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTTGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCTCATTCCCTTCTATAATCAGTGCCTTAAACCGTTaGTTATGTCCCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FEKVWPFWTLLLSFPSIISALNR*LCPGGG
Trigger: ACCACCCCCGGGACATAAGCAACGGTTTAAGGCACT...GATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCGTGTCACTGATCTGTTaGTGTCTCCTGTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVVSLIC*CLLSEE
Trigger: TTCTTCAGACAGGAGACAGCAACAGATCAGTGACAC...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCCTGGCAACTAAACCCTaGTGCTGTTACGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSLATKP*CCYERM
Trigger: CATTCTCTCGTAACAGCAGCAGGGTTTAGTTGCCAG...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCAGGCCCTTCAAAGACTaGAGAGAGGAGTTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FYNHLLSSLQGQAFISAIRPFKD*REEFAA
Trigger: TGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCT...GATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675749.1
CDS-3UTR GCA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACGCATGGATTGCATTTTaGTGCTCCCCCACAATACCA +
Preference number: 4 (lower is better)
Translates to: RIEYAVQEPALSISEFTNAWIAF*CSPTIP
Trigger: TGGTATTGTGGGGGAGCAGCAAAATGCAATCCATGC...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGCTACAGATGGCGAGTaGGTGAATGTCTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLEATDGE*VNVCLG
Trigger: CCCTAAACAGACATTCACCCACTCGCCATCTGTAGC...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TGGACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WTLLLSFPSIIIFFPVCKMTSRY*KSTMQP
Trigger: AGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCAT...CTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp ATGAGAAAAGGTCTAGTTGGTCCCTCAATGTGTAATTACGACACTTCGAATGGAATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: MRKGLVGPSMCNYDTSNGIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...TCCATTCGAAGTGTCGTAATTACACATTGAGGGACCAACTAGACCTTTTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGTTACGACACTTCGAATaGATCGATTGTGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRLRHFE*IDCVCL
Trigger: CAAACAGACACAATCGATCCATTCGAAGTGTCGTAA...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACATGTTCTCTGTCCACTaGCTATGGCTCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHMFSVH*LWLLPL
Trigger: CAGGGGCAAGAGCCATAGCCAGTGGACAGAGAACAT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGGTGACTTTCAACTTTaGATTCTTCCTTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDGDFQL*ILPSCL
Trigger: GAGACAGGAAGGAAGAATCCAAAGTTGAAAGTCACC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACATACAGGAGAGCTCTaGCTAGCATCTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRHTGEL*LASGRC
Trigger: GCACCTGCCAGATGCTAGCCAGAGCTCTCCTGTATG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAATCGTTGTGAGGTTATaGAAGAAACAGAAACGCCAC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRIVVRL*KKQKRH
Trigger: GTGGCGTTTCTGTTTCTTCCATAACCTCACAACGAT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTGCCCTACCTACATGCTaGGTCTTTCCATTTTTATCG +
Preference number: 4 (lower is better)
Translates to: KGFWRAIAKALTSSISNSALPTC*VFPFLS
Trigger: CGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGC...AGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp ATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCACAATCCCCAAGAGTCTaGAGGGTCTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: IPFYNHLLSSLQGQAFISQSPRV*RVWKSP
Trigger: GGGAGACTTCCAGACCCTCCAGACTCTTGGGGATTG...TGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
3UTR CAA 72 bp CACAACCTTTCTATGGATTCCGCGCTGATTTTCACCTaGGTGTTGCTGACAATTTGCAGGAACTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HNLSMDSALIFT*VLLTICRNSSS
Trigger: TGAAGAAGAGTTCCTGCAAATTGTCAGCAACACCAAGGTGAAAATCAGCGCGGAATCCATAGAAAGGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTTTCTTAGGAAGCACATaGGGCTTGACTGATGTGACA +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGFLGST*GLTDVT
Trigger: TGTCACATCAGTCAAGCCTCATGTGCTTCCTAAGAA...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACATCCGGCTCTTTGCTaGCTGTCTCCAGAATTTCGA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIHPALC*LSPEFR
Trigger: TCGAAATTCTGGAGACAGTCAGCAAAGAGCCGGATG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACAAAGACTTCATGACTaGAACACCAAAAGCAATGTC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRQRLHD*NTKSNV
Trigger: GACATTGCTTTTGGTGTTTCAGTCATGAAGTCTTTG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGCCATTACTGAGGCTTaGGTAGGCAGTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRAITEA*VGSFPL
Trigger: GAGGGGAAAACTGCCTACTCAAGCCTCAGTAATGGC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAGGACTTGTTACAGCTaGTGGCCACCAAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLRTCYS*WPPSAE
Trigger: CTCTGCACTTGGTGGCCATCAGCTGTAACAAGTCCT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATGGAAGGTGGCTTTCTaGTGCTCAGACCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRWKVAF*CSDPSR
Trigger: TCTGCTTGGGTCTGAGCATCAGAAAGCCACCTTCCA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCCCAAACTTCCTTTTTaGCAAAGATTAACAGGACCA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDPKLPF*QRLTGP
Trigger: TGGTCCTGTTAATCTTTGTCAAAAAGGAAGTTTGGG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAGTCTCAGAAAAATTTaGAAGGTAAGCTCACCTGAG +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDSLRKI*KVSSPE
Trigger: CTCAGGTGAGCTTACCTTTCAAATTTTTCTGAGACT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCGTGCTACCCCCTTCCTaGAATAACTTTGTGATCCCG +
Preference number: 4 (lower is better)
Translates to: FYNHLLSSLQGQAFISAIVLPPS*NNFVIP
Trigger: CGGGATCACAAAGTTATTTCAGGAAGGGGGTAGCAC...GATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
CDS-3UTR GCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGRKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp ATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCATGTAATCGTCCATCATaGCATGGGCTGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: IPFYNHLLSSLQGQAFISCNRPS*HGLREA
Trigger: TGCCTCCCTCAGCCCATGGCATGATGGACGATTACA...TGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
CDS-3UTR GCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACACTGGATACGCACAATaGAGAGTGCATTCTATAAGA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDTGYAQ*RVHSIR
Trigger: TCTTATAGAATGCACTCTGCATTGTGCGTATCCAGT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACCCAGGTTTCTTCACTaGAAAGTTGGGGGTGGACCA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLPRFLH*KVGGGP
Trigger: TGGTCCACCCCCAACTTTGCAGTGAAGAAACCTGGG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACTAATCCCACAGAAATaGAAACTACCGTCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRLIPQK*KLPSEN
Trigger: ATTCTCTGACGGTAGTTTGCATTTCTGTGGGATTAG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTACTAGACTGAGAGCTTaGATAGCAGCCCCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCTRLRA*IAAPVG
Trigger: TCCCACTGGGGCTGCTATGCAAGCTCTCAGTCTAGT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGTGTCTTTCTGCAGCTaGCCTGTAGCCTTGATTAGC +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIVSFCS*PVALIS
Trigger: GCTAATCAAGGCTACAGGGCAGCTGCAGAAAGACAC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ATTGCAATAATCAAGCAGCCCTACCTACATGCTGGGTCTTTCCATTTTTATCGATCGTTGCACAAATGGTaGTATGAGAGTCCTCACACC +
Preference number: 4 (lower is better)
Translates to: IAIIKQPYLHAGSFHFYRSLHKW*YESPHT
Trigger: GGTGTGAGGACTCTCATAGCACCATTTGTGCAACGA...TCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR GCA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGATGGGACCAATGAAATaGTCAATGTTAAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PTGRIEYAVQEPALSISEMGPMK*SMLSQF
Trigger: GAACTGGCTTAACATTGAGCATTTCATTGGTCCCAT...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTTCGATTGTGTCTGTTTaGTGTAAGGCGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLSIVSV*CKASSR
Trigger: TCTGGAGCTCGCCTTACACCAAACAGACACAATCGA...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGAAGCTAAAGAGCAGTaGATGTCCTATCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDEAKEQ*MSYLQF
Trigger: AAACTGAAGATAGGACATCCACTGCTCTTTAGCTTC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGACTCAGTGCTAAGGTaGCTCCAAGAGGAAAAACAC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYDSVLR*LQEEKH
Trigger: GTGTTTTTCCTCTTGGAGCCACCTTAGCACTGAGTC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGTAAGCTTCAGAAGATaGGTAATAACGAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDVSFRR*VITNSS
Trigger: TGAGGAGTTCGTTATTACCCATCTTCTGAAGCTTAC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAGACCCACTGGAAGGTaGCTTTCTGATGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRRPTGR*LSDAQT
Trigger: GGTCTGAGCATCAGAAAGCCACCTTCCAGTGGGTCT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGTGCTATTAATACTCTaGCCTTCTGGTAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRVLLIL*PSGRIC
Trigger: ACAGATTCTACCAGAAGGCCAGAGTATTAATAGCAC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACATAAGATGGCAGAGTTaGTATTGTGAATGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDIRWQS*YCECES
Trigger: GCTCTCACATTCACAATACCAACTCTGCCATCTTAT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAGCCTTTGAAAAAGTATaGCCATTCTGGACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: REAHGTNEMLNVKPVPTGAFEKV*PFWTLL
Trigger: AAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGC...TCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp GGCAAATTGGATAAAGAGTCAAAACCCATTGGTGTGTaGTATTCGAGACCCATCTCATGTGCAAAGACACAC +
Preference number: 4 (lower is better)
Translates to: GKLDKESKPIGV*YSRPISCAKTH
Trigger: GTGTGTCTTTGCACATGAGATGGGTCTCGAATACAACACACCAATGGGTTTTGACTCTTTATCCAATTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp CACAGACTGGCAAATTGGATAAAGAGTCAAAACCCATaGGTGTGTTGTATTCGAGACCCATCTCATGTGCAA +
Preference number: 4 (lower is better)
Translates to: HRLANWIKSQNP*VCCIRDPSHVQ
Trigger: TTGCACATGAGATGGGTCTCGAATACAACACACCAATGGGTTTTGACTCTTTATCCAATTTGCCAGTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp CTTTCTATGGATTCCGCGCTGATTTTCACCTTGGTGTaGCTGACAATTTGCAGGAACTCTTCTTCAGGATTT +
Preference number: 4 (lower is better)
Translates to: LSMDSALIFTLV*LTICRNSSSGF
Trigger: AAATCCTGAAGAAGAGTTCCTGCAAATTGTCAGCAACACCAAGGTGAAAATCAGCGCGGAATCCATAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR TCA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAAATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTCTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGCAGGTCTATGTTTGTaGTTTCTGTCCCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVAGLCL*FLSHKP
Trigger: GGGCTTGTGGGACAGAAATCACAAACATAGACCTGC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTGCCAGGGCCACTTCTaGGGAGAGCTATTGAATCTA +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCCQGHF*GELLNL
Trigger: TAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGTGGGAGTTGAACAATaGGAACATATGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVVGVEQ*EHMGTG
Trigger: CCCTGTGCCCATATGTTCTCATTGTTCAACTCCCAC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCTTGAACTCACCTCTTaGCCAAGCAGACCTAATAGA +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYLELTS*PSRPNR
Trigger: TCTATTAGGTCTGCTTGGTCAAGAGGTGAGTTCAAG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACCATATCCAGCCAAACTaGGCTTCACAAGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHHIQPN*ASQVKE
Trigger: CTCCTTCACTTGTGAAGCTCAGTTTGGCTGGATATG...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATTCTCAACACTACCCTaGAACTGCCGCCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVFSTLP*NCRPNF
Trigger: GAAGTTTGGGCGGCAGTTTCAGGGTAGTGTTGAGAA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGGTAGCTACCTGCAGTaGAACTTCCAAGTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHGSYLQ*NFQVSS
Trigger: ACTACTGACTTGGAAGTTTCACTGCAGGTAGCTACC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGTTCATAGTTGTTTTTaGTTGTTAGGAGCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRVHSCF*LLGAVD
Trigger: GTCTACAGCTCCTAACAATCAAAAACAACTATGAAC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGAGGAAGTCAAAGATCTaGCTCTCTAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLERKSKI*LSNAET
Trigger: GGTCTCAGCATTAGAGAGGCAGATCTTTGACTTCCT...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR GCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCAGTCAATGGTCCTTTaGTCCCTAAGTCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYQSMVL*SLSQVQ
Trigger: CTGAACTTGACTTAGGGAGCAAAGGACCATTGACTG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACAGGCTTTTGCTGTATTaGCTAGGCTGGAGTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHRLLLY*LGWSAV
Trigger: TACTGCACTCCAGCCTAGGCAATACAGCAAAAGCCT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAATAGGAACAGCTGTCTaGAGCTCCCAGCAAGACCAA +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVIGTAV*SSQQDQ
Trigger: TTGGTCTTGCTGGGAGCTGCAGACAGCTGTTCCTAT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACCTGATGGCCACCAAGTaGAGAGGAAAGAAGACTAGA +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHLMATK*RGKKTR
Trigger: TCTAGTCTTCTTTCCTCTGCACTTGGTGGCCATCAG...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACCCACAGAGAAAGCATaGCACACCCATGCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLPTEKA*HTHACY
Trigger: ATAGCAAGCATGGGTGTGGCATGCTTTCTCTGTGGG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGGTATGGTAGCTACCTaGAGTGAAACTTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYGMVAT*SETSKS
Trigger: TGACTTGGAAGTTTCACTGCAGGTAGCTACCATACC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TGGACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGACTATGCAAAATGGATaGTTCCCACTCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: WTLLLSFPSIIIFFPVCKTMQNG*FPLCPV
Trigger: GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGT...CTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATACTATGCAAAATGGATaGTTCCCACTCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLSFPSIIIFFPVCKDRHTMQNG*FPLCPV
Trigger: GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGT...ATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATTTGGACAGCACTGTaGATGACCTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRIWTAL*MTSRYW
Trigger: CCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAAT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCATGTTGCTTGTACACCTCTTTTCTCAGATTGGAAGGCATCTCCTGAGGTTCGGTATAATAAGATCATaGCTTTTGATGAGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TMLLVHLFSQIGRHLLRFGIIRS*LLMSLQ
Trigger: CTGCAAGCTCATCAAAAGCCATGATCTTATTATACC...GAACCTCAGGAGATGCCTTCCAATCTGAGAAAAGAGGTGTACAAGCAACATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAATGCTCCATGATTCGTaGGAAAGCCAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVMLHDS*ESQEAQ
Trigger: CTGTGCTTCCTGGCTTTCCCACGAATCATGGAGCAT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGTTTGTGGGTACCAATaGATTAAAGGGGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRVCGYQ*IKGVKS
Trigger: AGATTTTACCCCTTTAATCCATTGGTACCCACAAAC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATACTGTAGTGCAGAGATaGCAAACACTGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYTVVQR*QTLSKN
Trigger: GTTCTTGGACAGTGTTTGCCATCTCTGCACTACAGT...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGACTTCTGAATGACTCCTaGGAAAATAATGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRLLNDS*ENNEIT
Trigger: TGTGATCTCATTATTTTCCCAGGAGTCATTCAGAAG...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATACCCCAGAGTTGTCTaGAATGCCAGAGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIYPRVV*NARETE
Trigger: TTCTGTCTCTCTGGCATTCCAGACAACTCTGGGGTA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAACACCACAAGGGCCCTaGATTTCAAGCACAAAACTG +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHITPQGP*ISSTKL
Trigger: CAGTTTTGTGCTTGAAATCCAGGGCCCTTGTGGTGT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGAAGGAGAGGCGTTTTaGAAGACTCTAAAATATAGT +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESREGEAF*KTLKYS
Trigger: ACTATATTTTAGAGTCTTCCAAAACGCCTCTCCTTC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGAAGAAGAAAAGCACTaGCACCTCCTATCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVEEEKH*HLLSEP
Trigger: GGGCTCTGATAGGAGGTGCCAGTGCTTTTCTTCTTC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACAACTACTCAGATGAATaGGGCGGTCTAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHNYSDE*GGLGGL
Trigger: AAGTCCTCCTAGACCGCCCCATTCATCTGAGTAGTT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAGCCTTTGAAAAAGTATaGCCATTCTGGACCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IFFPVCKDRHLSQPSGTLAFEKV*PFWTLL
Trigger: AAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGC...TAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CCA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCCAATACTATGCAAAATaGATGCTTCCCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSQYYAK*MLPTLS
Trigger: GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTG...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTCTCCACTCCAGCATaGATTGCATTTTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LYASGSLKSPPPFRRHVKFSTPA*IAFCCS
Trigger: GGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAA...TTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
3UTR CAA 72 bp GTGACTTTCAACTTTGGATTCTTCCTTCCTGTCTCCTaGTCCATTCCCTTTCTTTCTCTTTCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VTFNFGFFLPVS*SIPFLSLSLPH
Trigger: ATGAGGAAGAGAAAGAGAAAGAAAGGGAATGGACAAGGAGACAGGAAGGAAGAATCCAAAGTTGAAAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp AATACAAAACCAATGGCTGAAGCTTCAGCAGCCATTTaGAGTCATGTTATGGTCTTAAAAATGGCGGCCACA +
Preference number: 4 (lower is better)
Translates to: NTKPMAEASAAI*SHVMVLKMAAT
Trigger: TGTGGCCGCCATTTTTAAGACCATAACATGACTCAAAATGGCTGCTGAAGCTTCAGCCATTGGTTTTGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATATCGAGGTCTGTACTaGATGGTCCCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRYRGLY*MVPNKP
Trigger: GGGTTTGTTTGGGACCATTCAGTACAGACCTCGATA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTCTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAAAGCTTACCCACCATaGTCAAGTCAGCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCKAYPP*SSQLHP
Trigger: GGGATGAAGCTGACTTGATCATGGTGGGTAAGCTTT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACACATTCACCCTACCATaGCTAACCCAGGAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHTFTLP*LTQEEV
Trigger: AACTTCTTCCTGGGTTAGTCATGGTAGGGTGAATGT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGACCAAGCCAACGTTTaGTTGGTGTACCTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIDQANV*LVYLKV
Trigger: CACTTTTAGGTACACCAATCAAACGTTGGCTTGGTC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGCAAGGGAACAATACTaGATGGAGAATGTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYAREQY*MENVFD
Trigger: GTCAAACACATTCTCCATTCAGTATTGTTCCCTTGC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATAACACAGAAAGTGGGTaGTTTCTGCATTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYNTESG*FLHFQL
Trigger: CAGTTGGAAATGCAGAAATCACCCACTTTCTGTGTT...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGTAGAACCTGGAAGATaGCTCTGTTTCTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYVEPGR*LCFCFT
Trigger: AGTGAAACAGAAACAGAGTCATCTTCCAGGTTCTAC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATGTTAGTCAGGTCCTaGGCAAGAGGGGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRMLVRS*ARGGLF
Trigger: AAATAAGCCCCCTCTTGCTCAGGACCTGACTAACAT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TGGACCTTGCTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGGGGCTATTACACTGTaGTTTTCTTGTTCCGTGATA +
Preference number: 4 (lower is better)
Translates to: WTLLLSFPSIIIFFPVCKGAITL*FSCSVI
Trigger: TATCACGGAACAAGAAAATCACAGTGTAATAGCCCC...CTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp AAGAGACTCAATTCCAAAATTTATGTGCCTTTGAAAAAGTATGGCCATTCTGGACTATGGATTCCGCGCTaGTTTTCACCTTGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: KRLNSKIYVPLKKYGHSGLWIPR*FSPWCC
Trigger: GCAACACCAAGGTGAAAATCAGCGCGGAATCCATAG...TCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR GCA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAAAGCTAAACCTGTCTaGAAAATTATGGGAAACCTA +
Preference number: 4 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDKAKPV*KIMGNL
Trigger: TAGGTTTCCCATAATTTTGCAGACAGGTTTAGCTTT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGAGACCCATCTCATGTaGAAAGACACACATAGGCTC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVETHLM*KDTHRL
Trigger: GAGCCTATGTGTGTCTTTGCACATGAGATGGGTCTC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAACAGCAGATCTCTCTaGAGAAACCCTAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHINSRSL*RNPKSH
Trigger: GTGGCTTTTAGGGTTTCTGCAGAGAGATCTGCTGTT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATGTAAAGCAATACAGTaGTGCCTGCAGGCTCTTACC +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRCKAIQ*CLQALT
Trigger: GGTAAGAGCCTGCAGGCAGCACTGTATTGCTTTACA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCTTATTTTGTCCATTTaGTCCTTCATCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYLILSI*SFIQSP
Trigger: AGGGCTCTGGATGAAGGAGCAAATGGACAAAATAAG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAAGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: LYASGSLKSPPPFRRHVKGTLTW*IILAEQ
Trigger: TTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCC...TTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAATCTTCTTTCCAGTTTaGAAGGACAGGCATTTATCT +
Preference number: 4 (lower is better)
Translates to: REAHGTNEMLNVKPVPTGIFFPV*KDRHLS
Trigger: AGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGAT...TCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAATGCAGTCCAAGAGCCTaGATTGTCCATATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CFRKFKISSTFQKACEIECSPRA*IVHIRV
Trigger: AACTCTGATATGGACAATGCAGGCTCTTGGACTGCA...TTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACGAGATGATGCCCAAGTaGCAGCTTTATCACTATTTA +
Preference number: 4 (lower is better)
Translates to: RIEYAVQEPALSISEFTNEMMPK*QLYHYL
Trigger: TAAATAGTGATAAAGCTGGCACTTGGGCATCATCTC...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATTTGTGGATGACAGTGTaGCAATTCCTCAAGGATCTA +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYLWMTV*QFLKDL
Trigger: TAGATCCTTGAGGAATTGCCACACTGTCATCCACAA...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGGATACAACAGAGGCTaGAGAGGATGTGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIGYNRG*RGCGEI
Trigger: TATTTCTCCACATCCTCTCCAGCCTCTGTTGTATCC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGACCAACACAGAAAGTaGGTGATTTCTGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYDQHRK*VISAFP
Trigger: TGGAAATGCAGAAATCACCCACTTTCTGTGTTGGTC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATTAATAAGTAGAACCTaGAAGATGACTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRLISRT*KMTLFL
Trigger: CAGAAACAGAGTCATCTTCCAGGTTCTACTTATTAA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAGTAAAGAAAGAAGGTaGCAGCCAGGACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRSKERR*QPGLSC
Trigger: ACAGCTCAGTCCTGGCTGCCACCTTCTTTCTTTACT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAGCACGAACAGGTGTTaGTTGCAGAGGGCAAATTCA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLSTNRC*LQRANS
Trigger: TGAATTTGCCCTCTGCAACCAACACCTGTTCGTGCT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACTTTATCTCAGCCATCTaGAACCTTAACTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RIEYAVQEPALSISEFTNFISAI*NLNLVH
Trigger: ATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAA...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp AAGAGACTCAATTCCAAAATTTATGTGCCTTTGAAAAAGTATGGCCATTCTGGACAGTGGTCTTCAAACTaGAGAAGGTGTGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: KRLNSKIYVPLKKYGHSGQWSSN*RRCAPS
Trigger: ACTTGGGGCACACCTTCTCCAGTTTGAAGACCACTG...TCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATCAATACTATGCAAAATaGATGCTTCCCACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GTNEMLNVKPVPTGRIEYQYYAK*MLPTLS
Trigger: GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTG...ATACTCTATTCTTCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp TGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAATATTTCAGAGGTAGCTaGCAACTAAACCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CFRKFKISSTFQKACEIEYFRGS*QLNPAA
Trigger: AGCAGCAGGGTTTAGTTGCCAGCTACCTCTGAAATA...TTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp CTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATCTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: LLSFPSIIIFFPVCKDRHLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...ATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGTTCTGCATTTTGATTaGGGCCTTGGTTACATGGGT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVVLHFD*GLGYMG
Trigger: ACCCATGTAACCAAGGCCTCAATCAAAATGCAGAAC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTTCAACCATTGTGGATaGCAGTGTGGCAATTCCTCA +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCFNHCG*QCGNSS
Trigger: TGAGGAATTGCCACACTGTCATCCACAATGGTTGAA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTCTCAATCTCCTCATCTaGAAACGGGGCAAATGGAAT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCLNLLI*KRGKWN
Trigger: ATTCCATTTGCCCCGTTTTCAGATGAGGAGATTGAG...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCACAAGTTCTCAATGTaGGTTATCACTCCTAAGTTC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYHKFSM*VITPKF
Trigger: GAACTTAGGAGTGATAACTCACATTGAGAACTTGTG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACACCACATATCGTTGTaGGGTTATGGAAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIHHISL*GYGRNR
Trigger: TCTGTTTCTTCCATAACCTCACAACGATATGTGGTG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATGTCTACAGAATTACTaGCGCTTTGCCCTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVCLQNY*RFALLA
Trigger: GGCTAAAAGGGCAAAGCGTCAGTAATTCTGTAGACA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACATTTTCTTAGGGCCTTaGGGGTTAATACACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHIFLGP*GLIHLF
Trigger: GAAGAGGTGTATTAACCCTCAAGGCCCTAAGAAAAT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTGTGCTTCATAGAAGATaGCCACAAATGCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PTASCILRAGTRYFIRRCVLHRR*PQMQEN
Trigger: ATTTTCTTGCATTTGTGGTCATCTTCTATGAAGCAC...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR TCA 90 bp AGGCATGTAGAGTGTTCAATTTCAAGAGACTCAATTCCAAAATTTATGTGCCTTGAGGGCAACTTGTTTTaGCAAACACTGAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: RHVECSISRDSIPKFMCLEGNLF*QTLRAI
Trigger: GATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCCTC...AAGGCACATAAATTTTGGAATTGAGTCTCTTGAAATTGAACACTCTACATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp TTTCTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGCCTGAAATAACTTTGTaGTCCCGAAGAGATGTCCAA +
Preference number: 4 (lower is better)
Translates to: FLYASGSLKSPPPFRRHVPEITL*SRRDVQ
Trigger: TTGGACATCTCTTCGGGATCACAAAGTTATTTCAGG...CACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGTGACGGAAATGTTCTaGATTTTGATTGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIVTEMF*ILIEAL
Trigger: CAAGGCCTCAATCAAAATGCAGAACATTTCCGTCAC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGCTTCATCCCTGGGATaGAAGGCTGTTTCAACATAT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRASSLG*KAVSTY
Trigger: ATATGTTGAAACAGCCTTGCATCCCAGGGATGAAGC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAGAGATGCTCAGCAATACTATaGAAAATGGATGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGSLKSPPPFRRHVKLKRCSAIL*KMDASH
Trigger: GTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCA...TCTCTTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp AAAACTGCTGGTATAATAAGATCATGGCTTTTGATGAGCTTGCAGGATCTTAGACCTCTTTTCTCAGATTaGAAGGCATCTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KTAGIIRSWLLMSLQDLRPLFSD*KASPEV
Trigger: AACCTCAGGAGATGCCTTCCAATCTGAGAAAAGAGG...TCTAAGATCCTGCAAGCTCATCAAAAGCCATGATCTTATTATACCAGCAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATGCAGAATAGTGGCTTaGATTCCACCATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVCRIVA*IPPSSR
Trigger: CCTTGAAGATGGTGGAATCCAAGCCACTATTCTGCA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAATGAGCCACTGTGTCTaGTCATCTGTTCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLMSHCV*SSVPFL
Trigger: TAGAAAGGGAACAGATGACCAGACACAGTGGCTCAT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGCCAGAGAGAAAAGTTaGGTTACCTACAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVAREKS*VTYKGK
Trigger: CTTCCCTTTGTAGGTAACCCAACTTTTCTCTCTGGC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTTATCTCAGCCATCTaGAACCTTAACTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQFISAI*NLNLVH
Trigger: ATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAA...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp CCCTCACTTTATGTGGTAGGTGGAAGGCTAAGATACTaGGGGATATACACATTTAGAGATTTTCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: PSLYVVGGRLRY*GIYTFRDFPKR
Trigger: TCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCCACCTACCACATAAAGTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAACTGCTGGTATAATAAGATCATGGCTTTTGATGAGCTTGCAGGATCTTAGAATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: KTAGIIRSWLLMSLQDLRMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...TCTAAGATCCTGCAAGCTCATCAAAAGCCATGATCTTATTATACCAGCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTATGTTCTCTCCACCATaGCCGATGTACAGAGATATT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCMFSPP*PMYRDI
Trigger: AATATCTCTGTACATCGGTCATGGTGGAGAGAACAT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp AAAACTGCTGGTATAATAAGATCATGGCTTTTGATGAGCTTGCAGGATCTTAGACACATGAGGCTTGACTaGTGTGACAATTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: KTAGIIRSWLLMSLQDLRHMRLD*CDNLVI
Trigger: TATCACCAAATTGTCACATCAGTCAAGCCTCATGTG...TCTAAGATCCTGCAAGCTCATCAAAAGCCATGATCTTATTATACCAGCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTACATTTTCCCTTACTCTaGCCAGACACACAATTGCAT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVHFPLL*PDTQLH
Trigger: ATGCAATTGTGTGTCTGGTCAGAGTAAGGGAAAATG...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACTGTTTGAGATTTCTCTaGTGTGTGCTATTCCACAAC +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHCLRFL*CVLFHN
Trigger: GTTGTGGAATAGCACACATCAGAGAAATCTCAAACA...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACACTGTGCAGTTATATaGAGAGTACTTTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLHCAVI*RVLSSV
Trigger: GACAGAGGAAAGTACTCTTCATATAACTGCACAGTG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATACAAAACCAATGGCTaGAGCTTCAGCAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLYKTNG*SFSSHF
Trigger: AAAATGGCTGCTGAAGCTTCAGCCATTGGTTTTGTA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATGGGCAAAGACTTCATaGCTGAAACACCAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRWAKTS*LKHQKQ
Trigger: TTGCTTTTGGTGTTTCAGTCATGAAGTCTTTGCCCA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTACAGACAAGCAAATGCTaGGGAATTTTGTCACACCAA +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVQTSKC*GILSHQ
Trigger: TTGGTGTGACAAAATTCCTCAGCATTTGCTTGTCTG...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGAAGCAAGTTTGTTTTaGGTGTGGGCAAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVEASLF*VWARSC
Trigger: ACAAGATCTTGCCCACACTCAAAACAAACTTGCTTC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTAGATGTTTGCATACTTaGAGATCACATGAATATGTG +
Preference number: 4 (lower is better)
Translates to: DICPLQISCSSVISSVRGRCLHT*RSHEYV
Trigger: CACATATTCATGTGATCTGCAAGTATGCAAACATCT...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR GCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACATGCAAGCTAAGGGATaGATTCATTTTCCCTTACTC +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHMQAKG*IHFPLL
Trigger: GAGTAAGGGAAAATGAATGCATCCCTTAGCTTGCAT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGATTATCTCAATAGATaGGGAAAAGGCCTTCGACAA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIDYLNR*GKGLRQ
Trigger: TTGTCGAAGGCCTTTTCCGCATCTATTGAGATAATC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAATTTATAGACCTAAGTaGTCACAGGAGAAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIIYRPK*SQEKVG
Trigger: TCCCACTTTCTCCTGTGAGCACTTAGGTCTATAAAT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTCTCTCAGACCACAGTaGAATCAAGTTAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCSLRPQ*NQVRTQ
Trigger: CTGAGTTCTAACTTGATTGCACTGTGGTCTGAGAGA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAATGCAAAGAAAAGGCTaGACAACACAACGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIMQRKG*TTQRKF
Trigger: AAACTTGCGTTGTGTTGTGCAGCCTTTTCTTTGCAT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTGAAATGGGACCAATGAAATaGTCAATGTTAAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: CFRKFKISSTFQKACEIEMGPMK*SMLSQF
Trigger: GAACTGGCTTAACATTGAGCATTTCATTGGTCCCAT...TTCAATTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR GCA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCATCATTGTTCCTaGTATGTAGGTATTAGGCTT +
Preference number: 4 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQFHHCS*YVGIRL
Trigger: AAGCCTAATACCTACATAGCAGGAACAATGATGGAA...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAGAGAGAAGAGGAGGTaGCAGATCAATCTAACTTGT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCREKRR*QINLTC
Trigger: ACAAGTTAGATTGATCTGCCACCTCCTCTTCTCTCT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTACTTTATGTGGTAGGTaGAAGGCTAAGATACTTGGG +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCTLCGR*KAKILG
Trigger: CCCAAGTATCTTAGCCTTCCACCTACCACATAAAGT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAGGCAACCTACAGAATaGGAGAAAATTTTTGCAACC +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIRQPTE*EKIFAT
Trigger: GGTTGCAAAAATTTTCTCCCATTCTGTAGGTTGCCT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATCCCCAATGAAACACTaGCAAAAGAAATGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRSPMKH*QKKCSS
Trigger: ACTGCTGCATTTCTTTTGCCAGTGTTTCATTGGGGA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGCTCACAGGAGAAAGTaGGAAACATCTAAACATCTA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIAHRRK*ETSKHL
Trigger: TAGATGTTTAGATGTTTCCCACTTTCTCCTGTGAGC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGTCAGTAGTATCTTGTaGGTATTGTCAGTTTTACAC +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYVSSIL*VLSVLH
Trigger: GTGTAAAACTGACAATACCCACAAGATACTACTGAC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTATGTATCTTGAGGGCTaGCACAAGATATTTTATAAG +
Preference number: 4 (lower is better)
Translates to: PTASCILRAGTRYFIRRCMYLEG*HKIFYK
Trigger: CTTATAAAATATCTTGTGCCAGCCCTCAAGATACAT...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp ATTGCAATAATCAAGCAGCCCTACCTACATGCTGGGTCTTTCCATTTTTATCGAAATTCTCTTCCTGTGTaGAATATCCCAAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: IAIIKQPYLHAGSFHFYRNSLPV*NIPNGV
Trigger: TACTCCATTTGGGATATTCCACACAGGAAGAGAATT...TCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CCA 90 bp CTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAATTTATCTCAGCCATCTaGAACCTTAACTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LYASGSLKSPPPFRRHVKFISAI*NLNLVH
Trigger: ATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAA...TTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
3UTR CAA 72 bp ATGACCCATATTCAATCCAAAAGCTGGATCCATTATTaGTACCTATTTATCAGCTGTCACAGGGTCTACCTT +
Preference number: 4 (lower is better)
Translates to: MTHIQSKSWIHY*YLFISCHRVYL
Trigger: AAGGTAGACCCTGTGACAGCTGATAAATAGGTACAAATAATGGATCCAGCTTTTGGATTGAATATGGGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp AATGCAAATTCAGAGGTCTGTCAGAAGTGCTTTGGTTaGTATAAAATGGGTGACCGCAGTTCTGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: NANSEVCQKCFG*YKMGDRSSEML
Trigger: TAACATTTCAGAACTGCGGTCACCCATTTTATACAAACCAAAGCACTTCTGACAGACCTCTGAATTTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACTTCCATGGAAATACTaGTCACATAACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRLPWKY*SHNRHT
Trigger: TGTATGCCTGTTATGTGATCAGTATTTCCATGGAAG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACAAATGTTCTGCATTTTaGTTGAGGCCTTGGTTACAT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHKCSAF*LRPWLH
Trigger: ATGTAACCAAGGCCTCAATCAAAATGCAGAACATTT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTGATGGCTTTGAAACATaGCCAGAAGCTCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCDGFET*PEAQIK
Trigger: CTTTATTTGAGCTTCTGGTCATGTTTCAAAGCCATC...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTTCCTAAGAGATGTTTaGGATTTCTCTGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCFLRDV*DFSDVC
Trigger: GCACACATCAGAGAAATCTCAAACATCTCTTAGGAA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATTCATTTTTCTCATTTaGGGGACACATACCCTCACT +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLFIFLI*GTHTLT
Trigger: AGTGAGGGTATGTGTCCCTCAAATGAGAAAAATGAA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACAAATCCCAATTAGGTaGCTTTCAACTTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIQIPIR*LSTLDS
Trigger: AGAATCCAAAGTTGAAAGTCACCTAATTGGGATTTG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAATAGACGACGAACTTaGTTCAGAGAGAGACAAAAA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHINRRRT*FRERQK
Trigger: TTTTTGTCTCTCTCTGAATCAAGTTCGTCGTCTATT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAGATCAGAACAGAACTaGAAGAGATACGAAAAACCC +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCRSEQN*KRYEKP
Trigger: GGGTTTTTCGTATCTCTTTCAGTTCTGTTCTGATCT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAATGCAATTTAAGCTCTaGGTCTTCAGACCAAAGACT +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLMQFKL*VFRPKT
Trigger: AGTCTTTGGTCTGAAGACTCAGAGCTTAAATTGCAT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAGGAAAGCAAATCATTaGCCATGTGAAATCCACACT +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLRKANH*PCEIHT
Trigger: AGTGTGGATTTCACATGGTCAATGATTTGCTTTCCT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAGCAACCTGTGCCTTTaGAATATAATGAAATGCCCT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCSNLCL*NIMKCP
Trigger: AGGGCATTTCATTATATTTCAAAGGCACAGGTTGCT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAGCAATAACTGCAAATaGTCATTTCCATGGAACAGT +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHISNNCK*SFPWNS
Trigger: ACTGTTCCATGGAAATGAGCATTTGCAGTTATTGCT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGGCAAAAGCAATAACTaGAAATGCTCATTTCCATGG +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLGKSNN*KCSFPW
Trigger: CCATGGAAATGAGCATTTGCAGTTATTGCTTTTGCC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAAGCTGGAGGCATCATaGTACCTAACTTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCKLEAS*YLTSNY
Trigger: ATAGTTTGAAGTTAGGTAGCATGATGCCTCCAGCTT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATAGTTATTTCACTTGGTaGTCCAGACATTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYSYFTW*SRHYVL
Trigger: CAAAACATAATGTCTGGAGCACCAAGTGAAATAACT...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACTCCTATTCAGAACATaGATGAAGCATGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLLLFRT*MKHVYR
Trigger: TCTGTAGACATGCTTCATGCATGTTCTGAATAGGAG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATGCCACACCCATGCTTaGTATAAATGCTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVCHTHA*YKCFSF
Trigger: AAAAGAGAAGCATTTATAGCAAGCATGGGTGTGGCA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTATATTTCTAGTGCCTaGACAGTGACTCACATACAG +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCYISSA*TVTHIQ
Trigger: CTGTATGTGAGTCACTGTGCAGGCACTAGAAATATA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAAATCTTCTTTCCAGTTTaGAAGGACAGGCATTTATCT +
Preference number: 4 (lower is better)
Translates to: LYASGSLKSPPPFRRHVKIFFPV*KDRHLS
Trigger: AGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGAT...TTTCACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGAGGCCTTGGTTACATaGGTATGTACATTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHEALVT*VCTFFK
Trigger: TTTGAAAAATGTACATACCCATGTAACCAAGGCCTC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACTTCTTAGAGATGCATaGGCTGAGTTAATAACCACA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLLLRDA*AELITT
Trigger: TGTGGTTATTAACTCAGCCCATGCATCTCTAAGAAG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATTTTCCTACCTGCAATaGCAGAAATTCCTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVFSYLQ*QKFLSA
Trigger: AGCACTAAGGAATTTCTGCCATTGCAGGTAGGAAAA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATTGGTTTGTATAAAATaGGTGACCGCAGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHILVCIK*VTAVLK
Trigger: TTTCAGAACTGCGGTCACCCATTTTATACAAACCAA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp GAATATTGGCAAATACTCAAGATCTGCAAAGGAATTTaGGGGTGGATTTATTCACCACTGTCTCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: EYWQILKICKGI*GWIYSPLSHVY
Trigger: ATACACATGAGACAGTGGTGAATAAATCCACCCCAAAATTCCTTTGCAGATCTTGAGTATTTGCCAATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp TTATGTGCCTTTGAAAAAGTATGGCCATTCTGGACCTaGCTTCTCTCATTCCCTTCTATAATCATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LCAFEKVWPFWT*LLSFPSIIIFF
Trigger: AAAGAAGATGATTATAGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR TCA 90 bp AAAACTGCTGGTATAATAAGATCATGGCTTTTGATGAGCTTGCAGGATCTTAGATACTTGCAGATCACATaGATATGTGTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTAGIIRSWLLMSLQDLRYLQIT*ICVFFF
Trigger: GAAGAAGAAGACACATATTCATGTGATCTGCAAGTA...TCTAAGATCCTGCAAGCTCATCAAAAGCCATGATCTTATTATACCAGCAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAACAAGTATCAATAGCTaGATCGATCAAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLTSINS*IDQAEE
Trigger: TTCTTCTGCTTGATCGATTCAGCTATTGATACTTGT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAATAAAGCCACAAAGATaGGGAAAAACCAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLIKPQR*GKTSPI
Trigger: TATTGGACTGGTTTTTCCTCATCTTTGTGGCTTTAT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR TCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAATTTCCTATTTGCCCTaGGAAGACAAAAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRISYLP*EDKSKD
Trigger: ATCTTTGCTTTTGTCTTCTCAGGGCAAATAGGAAAT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAGAAAAGTTCCTGACTaGAGGTCTATGTTTGTGATT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRRKVPD*RSMFVI
Trigger: AATCACAAACATAGACCTGCAGTCAGGAACTTTTCT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACACTAAGGAGCTTCTGTaGAGCAAAAGAAACTATTAT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHTKELL*SKRNYY
Trigger: ATAATAGTTTCTTTTGCTGCACAGAAGCTCCTTAGT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATGGAAAAACATTCCATaGTCATGGATAGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVWKNIP*SWIGRI
Trigger: GATTCTTCCTATCCATGAGCATGGAATGTTTTTCCA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAAAAGATGTGTCAATCTaGAATTACATCATGGTTACC +
Preference number: 4 (lower is better)
Translates to: PTQMPINVRTDKENVAHIKDVSI*NYIMVT
Trigger: GGTAACCATGATGTAATTGCAGATTGACACATCTTT...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACTGTAACAGTTTTAGGTaGTTAATAGACGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LISKCKRMKTITNSLSDHCNSFR*LIDGLL
Trigger: AAGAAGTCCGTCTATTAACCACCTAAAACTGTTACA...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAAATGCTCATTTCCATaGAACAGTAACTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCKCSFP*NSNCDS
Trigger: ACTGTCACAGTTACTGTTCCATGGAAATGAGCATTT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAAAAGCCACAAGAGATTaGGGGCTAATATTCAACATT +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVKATRD*GLIFNI
Trigger: AATGTTGAATATTAGCCCCCAATCTCTTGTGGCTTT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAACCTCTCAGAAATATaGGACTATGTGAAAAGACCA +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCNLSEI*DYVKRP
Trigger: TGGTCTTTTCACATAGTCCCATATTTCTGAGAGGTT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTCACAGTTATTTCACTTaGTGCTCCAGACATTATGTT +
Preference number: 4 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCHSYFT*CSRHYV
Trigger: AACATAATGTCTGGAGCACCAAGTGAAATAACTGTG...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR GCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTATACTTCATGGGATATTaGTTAATAAGTAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLYFMGY*LISRTW
Trigger: CCAGGTTCTACTTATTAAGCAATATCCCATGAAGTA...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTACTTGTTTCTGATGAGTaGCAAATATCCAGAATGTTA +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVLVSDE*QISRML
Trigger: TAACATTCTGGATATTTGCCACTCATCAGAAACAAG...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGGGAACAATACTGAATaGAGAATGTGTTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRGNNTE*RMCLTN
Trigger: ATTTGTCAAACACATTCTCCATTCAGTATTGTTCCC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAAAAGCTAAGATCCACTaGATTGAAATTCTTACTTCC +
Preference number: 4 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVKAKIH*IEILTS
Trigger: GGAAGTAAGAATTTCAATCCAGTGGATCTTAGCTTT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CCA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACACTACACAGTGTTATaGGACAGTAGAAATTCATAT +
Preference number: 4 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLHYTVL*DSRNSY
Trigger: ATATGAATTTCTACTGTCCCATAACACTGTGTAGTG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
3UTR CAA 72 bp GCAGATTTAGTTTCTGTCCATGAATATGAAGATTCTTaGTTGAGTCTTACTGTTGAATGTGTCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: ADLVSVHEYEDS*LSLTVECVWLS
Trigger: ACTTAGCCAGACACATTCAACAGTAAGACTCAACAAAGAATCTTCATATTCATGGACAGAAACTAAATCTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
3UTR CAA 72 bp AATTTCAAGAGACTCAATTCCAAAATTTATGTGCCTTaGAAAAAGTATGGCCATTCTGGACCTTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NFKRLNSKIYVP*KKYGHSGPCFS
Trigger: AGAGAAGCAAGGTCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTTGAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS TCA 90 bp GGCGCTGACTGCCAGAGATCCTCGTCCTCCGCCGCTGCTGCCTCCTaGCTCCGGAGTAGTCCCCGCCCGGCCCGGCCCAGGCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: GADCQRSSSSAAAAS*LRSSPRPARPRLLG
Trigger: GCCGAGGAGCCTGGGCCGGGCCGGGCGGGGACTACTCCGGAGTCAGGAGGCAGCAGCGGCGGAGGACGAGGATCTCTGGCAGTCAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000524201.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000675749.1
CDS CCA 90 bp GGCGGGGCGGGCCGAGGTCAGTGCGGTGCGCACGACCCGAGCGTCTaGCGGGGGTCCCTGCGTCCCACTGTGCAGGTCTGTTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGAGRGQCGAHDPSV*RGSLRPTVQVCFLG
Trigger: CCCCAAGAAACAGACCTGCACAGTGGGACGCAGGGACCCCCGCCAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGCCCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519049.6
ENST00000523367.1
ENST00000674732.1
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGGCTCGCGCCCGCCTTaGTTAGTTTCCCGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDGSRPP*LVSRRG
Trigger: GCCCCGCCGGGAAACTAACAAAGGCGGGCGCGAGCC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGGCTCGCGCCCGCCTTaGTTAGTTTCCCGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GLEVSPTLSRILILPHCGGSRPP*LVSRRG
Trigger: GCCCCGCCGGGAAACTAACAAAGGCGGGCGCGAGCC...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGGATGCTCAAGCTTGGTaGGGGGAGAGGTATCTGCCA +
Preference number: 5 (lower is better)
Translates to: ALASIWQVPLWDTASRSRDAQAW*GERYLP
Trigger: TGGCAGATACCTCTCCCCCAACCAAGCTTGAGCATC...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS GCA 90 bp TGTCAGGCGGGTCGGATCCACCGAGGCGCGCAGTCAATGGTCCTTTaGTCCCTAAGTCAAGTTCAGCAGCCGCATTTCTGGTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: CQAGRIHRGAQSMVL*SLSQVQQPHFWFNV
Trigger: GACATTGAACCAGAAATGCGGCTGCTGAACTTGACTTAGGGAGCAAAGGACCATTGACTGCGCGCCTCGGTGGATCCGACCCGCCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATCAGGCTTTTGCTGTATaGCCTAGGCTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDQAFAV*PRLECS
Trigger: ACTGCACTCCAGCCTAGGCAATACAGCAAAAGCCTG...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GCAGTGCTGTTCAGAAGCCTGGCGTCCCTACACCAGCGGAGGCAGGAGAGGTCGTGTCTGGCTAAGTTTTaGTCTCCCACCTCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: AVLFRSLASLHQRRQERSCLAKF*SPTSRK
Trigger: TTTTCTAGAGGTGGGAGACAAAAACTTAGCCAGACA...CGACCTCTCCTGCCTCCGCTGGTGTAGGGACGCCAGGCTTCTGAACAGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS TCA 90 bp TGTAATCGTCCATCATGCCATGGGCTGAGGGAGGCAGCACTCTTCTaGCACAACCAGGCCCATGTTCTCTCCACCATGACCGATGTACAG +
Preference number: 5 (lower is better)
Translates to: CNRPSCHGLREAALF*HNQAHVLSTMTDVQ
Trigger: CTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTTGTGTCAGAAGAGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGATTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000674873.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTCAGTGCCTTAAACCGTaGCTTATGTCCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSQCLKP*LMSRGW
Trigger: CCACCCCCGGGACATAAGCAACGGTTTAAGGCACTG...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTGCAGGTCTGTTTCTaGGGGAGGGGGAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCVQVCF*GRGSQA
Trigger: CGCCTGGCTCCCCCTCCCCAAGAAACAGACCTGCAC...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CAA 90 bp AGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGAGTGCAGGTCTGTTTCTaGGGGAGGGGGAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: REAHGTNEMLNVKPVPTGVQVCF*GRGSQA
Trigger: CGCCTGGCTCCCCCTCCCCAAGAAACAGACCTGCAC...TCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTGGCTCGCGCCCGCCTTaGTTAGTTTCCCGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLGSRPP*LVSRRG
Trigger: GCCCCGCCGGGAAACTAACAAAGGCGGGCGCGAGCC...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGCAGTCAATGGTCCTTaGCTCCCTAAGTCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDAVNGP*LPKSSS
Trigger: TGAACTTGACTTAGGGAGCAAAGGACCATTGACTGC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GCTCTGGCTAGCATCTGGCAGGTGCCCCTCTGGGACACAGCTTCCAGAAGTAGGCCACAGTTATTTCACTaGGTGCTCCAGACATTATGT +
Preference number: 5 (lower is better)
Translates to: ALASIWQVPLWDTASRSRPQLFH*VLQTLC
Trigger: ACATAATGTCTGGAGCACCAAGTGAAATAACTGTGG...CCTACTTCTGGAAGCTGTGTCCCAGAGGGGCACCTGCCAGATGCTAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTCCACTCCAGCATGGATaGCATTTTGCTGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSPLQHG*HFAAPP
Trigger: TGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGG...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp GACTTCTCCACTCCAGCATGGATTGCATTTTGCTGCTCCCCCACAATACCATCCAGGGCCGGAGTCTGCTaGTCTTTGACTTCTCCACTC +
Preference number: 5 (lower is better)
Translates to: DFSTPAWIAFCCSPTIPSRAGVC*SLTSPL
Trigger: GAGTGGAGAAGTCAAAGACAAGCAGACTCCGGCCCT...GGATGGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCTGGAGTGGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp GGCCCTTCAAAGACTGCAGAGAGGAGTTCGCAGCACCCCACCATAATGAAGGCTTTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: GPSKTAERSSQHPTIMKALDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...AGCCTTCATTATGGTGGGGTGCTGCGAACTCCTCTCTGCAGTCTTTGAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGTAGTGACCATGTCTTaGCTGAAAACCCTACTGGAT +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDVVTMS*LKTLLD
Trigger: ATCCAGTAGGGTTTTCAGCAAAGACATGGTCACTAC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAAGCAGGGTGGGGCATaGCCTCACCTGGGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDKQGGA*PHLGSA
Trigger: TGCACTTCCCAGGTGAGGCAATGCCCCACCCTGCTT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATGGGTACACTCGACTGTaGAAGTTTGATTGTGGATGT +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDGYTRL*KFDCGC
Trigger: ACATCCACAATCAAACTTCAACAGTCGAGTGTACCC...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGTGGCCATTCTGGACCTaGCTTCTCTCATTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: GLEVSPTLSRILILPHCGWPFWT*LLSFPS
Trigger: AGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCA...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATCAGTGCCTTAAACCGTaGCTTATGTCCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: ASSNWKNRVCSPRACIVHQCLKP*LMSRGW
Trigger: CCACCCCCGGGACATAAGCAACGGTTTAAGGCACTG...ATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GGAGGGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGAGCATGGATTGCATTTaGCTGCTCCCCCACAATACC +
Preference number: 5 (lower is better)
Translates to: GGSGSLPNSVSDPHSSSLSMDCI*LLPHNT
Trigger: GGTATTGTGGGGGAGCAGCAAAATGCAATCCATGCT...CAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS TCA 90 bp CCCAAGCAACAGCCTGGTAAGGAACCCCGCCCGTCTTCGCCTTTCTaGGTCCAGTTAATTGTATTCGTTTCCGTCAAGCATGTACACAGT +
Preference number: 5 (lower is better)
Translates to: PKQQPGKEPRPSSPF*VQLIVFVSVKHVHS
Trigger: ACTGTGTACATGCTTGACGGAAACGAATACAATTAACTGGACTCAGAAAGGCGAAGACGGGCGGGGTTCCTTACCAGGCTGTTGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS GCA 90 bp CCTGCAGAGCCCCACCAGGGCCCACCTCTTCCCATCTCTGAGAAGTaGAGCTACTACTCTTTGTGGACAAAACTTTCTGAGAATAACAGT +
Preference number: 5 (lower is better)
Translates to: PAEPHQGPPLPISEK*SYYSLWTKLSENNS
Trigger: ACTGTTATTCTCAGAAAGTTTTGTCCACAAAGAGTAGTAGCTGCACTTCTCAGAGATGGGAAGAGGTGGGCCCTGGTGGGGCTCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS-3UTR CAA 90 bp CAAAACCCACCAACATCCCAGGGCCGGAGTCTGCTTGTCTTTGACTTCTCCACTTTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: QNPPTSQGRSLLVFDFSTLDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...AGTGGAGAAGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGGGAGCCAAGTGGTCTaGATCAGTAGATCCCACCCC +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDGSQVV*ISRSHP
Trigger: GGGGTGGGATCTACTGATCAAGACCACTTGGCTCCC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TGGAGAGCGATTGCCAAAGCTCTTACCTCCAGCATTTCCAATTCTCTTCCTGTGCCCTTCCCTGGTACCTaGCCCTATGTGTCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: WRAIAKALTSSISNSLPVPFPGT*PYVSLR
Trigger: ACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGG...CACAGGAAGAGAATTGGAAATGCTGGAGGTAAGAGCTTTGGCAATCGCTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp CTGTGCCCCTTCCCTGGTACCTTGCCCTATGTGTCTCTTCGTCTTTGTCCTTTGCCAGCCAAAGCTGACTaGAGTTTCCAAGGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LCPFPGTLPYVSLRLCPLPAKAD*SFQGFL
Trigger: CAAAAACCCTTGGAAACTCAAGTCAGCTTTGGCTGG...CAAAGGACAAAGACGAAGAGACACATAGGGCAAGGTACCAGGGAAGGGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGGTCCAAGAGCCTGCATaGTCCATATCAGAGTTTACC +
Preference number: 5 (lower is better)
Translates to: GLEVSPTLSRILILPHCGVQEPA*SISEFT
Trigger: GGTAAACTCTGATATGGACAATGCAGGCTCTTGGAC...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTGTGACAGTACTTCATaGGAATTACCCAGATTAACG +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDCDSTS*ELPRLT
Trigger: CGTTAATCTGGGTAATTCCAATGAAGTACTGTCACA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAGGAGGCAGCAATCTTaGCTGTTCTGCAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDRRQQS*LFCSLC
Trigger: GCAGAGGCTGCAGAACAGCAAAGATTGCTGCCTCCT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGCCAAGAGGATGGAGTTaGGAGAGCTTCTGGATAGCT +
Preference number: 5 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWPRGWS*ESFWIA
Trigger: AGCTATCCAGAAGCTCTCCAAACTCCATCCTCTTGG...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp ATGAGCTACTCTGCAGTGTCACTGATCTGTTGCTGTCTCCTGTCTGAAGAATCTCCTCATTCTTCCTCATaGTGGGGAGTGAGAAGGGCG +
Preference number: 5 (lower is better)
Translates to: MSYSAVSLICCCLLSEESPHSSS*WGVRRA
Trigger: CGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGG...AGATTCTTCAGACAGGAGACAGCAACAGATCAGTGACACTGCAGAGTAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GGCATACACAAAACCCACCAACATCCCAGGGCCGGAGTCTGCTTGTCTTTGACTAGAAGGCATGTGAAATaGAAGAGAAGCACATGGGAC +
Preference number: 5 (lower is better)
Translates to: GIHKTHQHPRAGVCLSLTRRHVK*KRSTWD
Trigger: GTCCCATGTGCTTCTCTTCAATTTCACATGCCTTCT...AGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGTTTTGTGTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp TTCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAAGGAGTCTGCTTGTCTTaGACTTCTCCACTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: FLIVGSEKGGNKRPVVFKGVCLS*TSPLQH
Trigger: ATGCTGGAGTGGAGAAGTCAAAGACAAGCAGACTCC...TTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS GCA 90 bp GGCTCCATTCTGAACTTGGTGCAGACTGAACTTGTATATGCAGACTaGTTGGGCAGTGGTCTATTCTGTGTAGACAGGGCAAAGTCACCA +
Preference number: 5 (lower is better)
Translates to: GSILNLVQTELVYAD*LGSGLFCVDRAKSP
Trigger: TGGTGACTTTGCCCTGTCTACACAGAATAGACCACTGCCCAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAGAATGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATGCAGTGGCATGATCTaGGCTAACTGCAACCTCCGT +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRCSGMI*ANCNLR
Trigger: ACGGAGGTTGCAGTTAGCCAAGATCATGCCACTGCA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp AAAGCACTGGCACCTCCTATCAGAGCCCGGCTTGTGCAGAGCCCTATTGGGGATTCCCAAGCACTGATGTaGATTATGTACTTGTTAAAC +
Preference number: 5 (lower is better)
Translates to: KALAPPIRARLVQSPIGDSQALM*IMYLLN
Trigger: GTTTAACAAGTACATAATCAACATCAGTGCTTGGGA...ATCCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAGGAGGTGCCAGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTGTCAGTAGGCCGAATCCGTCGTTGCACAAATGGTGCTATGAGAGTCCTCACAGAAATCCTCAAAACCTaGTCAGTAGGCCGAATCCGT +
Preference number: 5 (lower is better)
Translates to: LSVGRIRRCTNGAMRVLTEILKT*SVGRIR
Trigger: ACGGATTCGGCCTACTGACAAGGTTTTGAGGATTTC...TGTGAGGACTCTCATAGCACCATTTGTGCAACGACGGATTCGGCCTACTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp ACTCTCTGGATACTCATGATGCTGCATCCTCCATCCTTTTGCCCTGAAGACTGGAGTTTCCAAGGGTTTTaGGAGAGCGATTGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: TLWILMMLHPPSFCPEDWSFQGF*ESDCQS
Trigger: GCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACT...CCAGTCTTCAGGGCAAAAGGATGGAGGATGCAGCATCATGAGTATCCAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp GGTCTGGAAGTCTCCCCAACTCTGTCTCGGATCCTCATTCTTCCTCATTGTGGGCATCTTCTTTCCAGTTaGCAAGGACAGGCATTTATC +
Preference number: 5 (lower is better)
Translates to: GLEVSPTLSRILILPHCGHLLSS*QGQAFI
Trigger: GATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG...CCCACAATGAGGAAGAATGAGGATCCGAGACAGAGTTGGGGAGACTTCCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp CTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCCCTGGCCATTCTGGACCTaGCTTCTCTCATTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: LSAQQYYAKWMLPTLSCPWPFWT*LLSFPS
Trigger: AGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCA...GGGACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp CATGATGGGTCTGCTGGGCACAGTGGACTTGACAGTGCCTTAAACCGTTGCTTAAGAAGGCATGTGAAATaGAAGAGAAGCACATGGGAC +
Preference number: 5 (lower is better)
Translates to: HDGSAGHSGLDSALNRCLRRHVK*KRSTWD
Trigger: GTCCCATGTGCTTCTCTTCAATTTCACATGCCTTCT...TAAGCAACGGTTTAAGGCACTGTCAAGTCCACTGTGCCCAGCAGACCCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACAGAAGGCATGTGAAATaGAAGAGAAGCACATGGGAC +
Preference number: 5 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNRRHVK*KRSTWD
Trigger: GTCCCATGTGCTTCTCTTCAATTTCACATGCCTTCT...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp AGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGTTTACCAACCAGTGCCTTAAACCGTaGCTTATGTCCCGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: RIEYAVQEPALSISEFTNQCLKP*LMSRGW
Trigger: CCACCCCCGGGACATAAGCAACGGTTTAAGGCACTG...GTTGGTAAACTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS CCA 90 bp TTAACTTGGTGCATCATCCTGGCAGAACAAGCAGAGAGTAGTATTTaGACAGCACTGTGGATGACCTCCAGGTACTGGAAGTCAACGATG +
Preference number: 5 (lower is better)
Translates to: LTWCIILAEQAESSI*TALWMTSRYWKSTM
Trigger: CATCGTTGACTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTGCTTGTTCTGCCAGGATGATGCACCAAGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATTGTCTAGTCAGGACTaGTTACAGCTGATGGCCACC +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRLSSQD*LQLMAT
Trigger: GGTGGCCATCAGCTGTAACAAGTCCTGACTAGACAA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAAGTGTGGGCAAGATCTaGTGGAGGATGACAACTTCC +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRSVGKI*WRMTTS
Trigger: GGAAGTTGTCATCCTCCACAAGATCTTGCCCACACT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACTTGTGCAGAGCCCTATaGGGGATTTTCTTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDLCRAL*GIFLGP
Trigger: AGGCCCTAAGAAAATCCCCAATAGGGCTCTGCACAA...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp AAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTTACAGGCCGAATCCGTCGTaGCACAAATGGTGCTATGAG +
Preference number: 5 (lower is better)
Translates to: KADLSFQGFLESDCQSSYRPNPS*HKWCYE
Trigger: CTCATAGCACCATTTGTGCAACGACGGATTCGGCCT...GTAAGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp CAAAACCCACCAACATCCCAGGGCCGGAGTCTGCTTGTCTTTGACTTCTCCACTATAGTTCAATTGTCCTaGAGGGCAACTTGTTTTGAC +
Preference number: 5 (lower is better)
Translates to: QNPPTSQGRSLLVFDFSTIVQLS*RATCFD
Trigger: GTCAAAACAAGTTGCCCTCAAGGACAATTGAACTAT...AGTGGAGAAGTCAAAGACAAGCAGACTCCGGCCCTGGGATGTTGGTGGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp GCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATGTCCAAGAGCCTGCATaGTCCATATCAGAGTTTACC +
Preference number: 5 (lower is better)
Translates to: ASSNWKNRVCSPRACIVHVQEPA*SISEFT
Trigger: GGTAAACTCTGATATGGACAATGCAGGCTCTTGGAC...ATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTATTTTCACCTTGGTGTaGCTGACAATTTGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSIFTLV*LTICRN
Trigger: GTTCCTGCAAATTGTCAGCAACACCAAGGTGAAAAT...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS TCA 90 bp AACCAGGCCCATGTTCTCTCCACCATGACCGATGTACAGAGATATTaGATGTCATTAGATCGGTGTCCTTTGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: NQAHVLSTMTDVQRY*MSLDRCPLRVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000675749.1
CDS GCA 90 bp TGCAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAAGCAGAGAGTAGTATTTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: CKDRHLSQPSGTLTW*IILAEQAESSIWTA
Trigger: TGCTGTCCAAATACTACTCTCTGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS CCA 90 bp CATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCTaGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: HLLSSLQGQAFISAI*NLNLVHHPGRTSRE
Trigger: CTCTCTGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS-3UTR CAA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTGGTGCCGGCACCATGTaGCTTGTACACCATGTGTCT +
Preference number: 5 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLGAGTM*LVHHVS
Trigger: AGACACATGGTGTACAAGCAACATGGTGCCGGCACC...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CAA 90 bp TCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTCTCTTGCTTCCACTCTaGCTATGTGATGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SHVQVSSPVLEVGDSSVCLLLPL*LCDVPP
Trigger: AGGAGGCACATCACATAGCAAGAGTGGAAGCAAGAG...ACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTGAACATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CAA 90 bp TGTGTAATTACGACACTTCGAATGGATCGATTGTGTCTGTTTGGTGTAAGGCGAGGTGCCGGCACCATGTaGCTTGTACACCTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CVITTLRMDRLCLFGVRRGAGTM*LVHLFS
Trigger: AGAAAAGAGGTGTACAAGCAACATGGTGCCGGCACC...TCGCCTTACACCAAACAGACACAATCGATCCATTCGAAGTGTCGTAATTACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGTCACAGGGTCTACCTaGGTGGCTGATAACCACAGG +
Preference number: 5 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYVTGST*VADNHR
Trigger: CCTGTGGTTATCAGCCACCAAGGTAGACCCTGTGAC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTCTATCAGAGCCCGGCTaGTGCAGAGCCCTATTGGGG +
Preference number: 5 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCLSEPG*CRALLG
Trigger: CCCCAATAGGGCTCTGCACAAGCCGGGCTCTGATAG...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TCCTCATTGTGGGGAGTGAGAAGGGCGGCAATAAGAGACCAGTGGTCTTCAAACATAGTTCAATTGTCCTaGAGGGCAACTTGTTTTGAC +
Preference number: 5 (lower is better)
Translates to: SSLWGVRRAAIRDQWSSNIVQLS*RATCFD
Trigger: GTCAAAACAAGTTGCCCTCAAGGACAATTGAACTAT...GTTTGAAGACCACTGGTCTCTTATTGCCGCCCTTCTCACTCCCCACAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS TCA 90 bp AACCAGGCCCATGTTCTCTCCACCATGACCGATGTACAGAGATATTaGATGTCATTAGATCGGTGTCCACCATTATGTATCGAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: NQAHVLSTMTDVQRY*MSLDRCPPLCIEVC
Trigger: ACAGACCTCGATACATAATGGTGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524201.1
CDS CCA 90 bp GTTTGCAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTaGTGCATCATCCTGGCAGAACAAGCAGAGAGTAGTATTTGGACA +
Preference number: 5 (lower is better)
Translates to: VCKDRHLSQPSGTLT*CIILAEQAESSIWT
Trigger: TGTCCAAATACTACTCTCTGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS-3UTR CAA 90 bp AGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGTTCCAACTGGATTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: REAHGTNEMLNVKPVPTGLDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...TCCAGTTGGAACTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TTTCCAAAAGCTGAGCAGGTGCCGGCACCATGTTGCTTGTACACCTCTTTTCTCCGATGTACAGAGATATaGAATGTCATTAGATCGGTG +
Preference number: 5 (lower is better)
Translates to: FPKAEQVPAPCCLYTSFLRCTEI*NVIRSV
Trigger: CACCGATCTAATGACATTCAATATCTCTGTACATCG...GAGAAAAGAGGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CAA 90 bp CAATCTCAGCTCACTGCAACATCTGTCTCCAGGATTCAGATGACTCTCCTGCCTCGATGTACAGAGATATaGAATGTCATTAGATCGGTG +
Preference number: 5 (lower is better)
Translates to: QSQLTATSVSRIQMTLLPRCTEI*NVIRSV
Trigger: CACCGATCTAATGACATTCAATATCTCTGTACATCG...AGGCAGGAGAGTCATCTGAATCCTGGAGACAGATGTTGCAGTGAGCTGAGATTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTCTCTTGCTTCCACTCTaGCTATGTGATGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: DICPLQISCSSVISSVRGLLLPL*LCDVPP
Trigger: AGGAGGCACATCACATAGCAAGAGTGGAAGCAAGAG...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CAA 90 bp CCCACAGCTTCATGTATCTTGAGGGCTGGCACAAGATATTTTATAAGGAGATGTCTCTTGCTTCCACTCTaGCTATGTGATGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PTASCILRAGTRYFIRRCLLLPL*LCDVPP
Trigger: AGGAGGCACATCACATAGCAAGAGTGGAAGCAAGAG...ACATCTCCTTATAAAATATCTTGTGCCAGCCCTCAAGATACATGAAGCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCCCAAACCCCAACTTTaGCTCCCATGTTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYPKPQL*LPCSLS
Trigger: GGACAGAGAACATGGGAGCAAAAGTTGGGGTTTGGG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGTCCTATCTTCAGTTTaGCCAGGGCCACTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYVLSSV*PGPLLR
Trigger: CCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATAGTTAGAGCCAGCCTCTaGAAACTGGCTGCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: PTQMPINVRTDKENVAHIVRASL*KLAASL
Trigger: AAGGGAGGCAGCCAGTTTCAAGAGGCTGGCTCTAAC...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCCACAAAGATACTCTTaGAGAAGAGCAACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDPQRYS*RRATPR
Trigger: TCTTGGGGTTGCTCTTCTCAAAGAGTATCTTTGTGG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCACACAGCAGAGTTCTaGTCACATTTAGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDHTAEF*SHLGSL
Trigger: GAGACTTCCTAAATGTGACAAGAACTCTGCTGTGTG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCGCAACAATCATAATTaGTCTCCCAGTGGATACTGG +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDRNNHN*SPSGYW
Trigger: CCAGTATCCACTGGGAGACAAATTATGATTGTTGCG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAAAGAGGGGGCTTATTTaGTCCATTTGCTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRKRGLI*SICSFI
Trigger: GATGAAGGAGCAAATGGACAAAATAAGCCCCCTCTT...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTACTTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGGCCATTCTGGACCTaGCTTCTCTCATTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: LLLSAQQYYAKWMLPTLSWPFWT*LLSFPS
Trigger: AGAAGGGAATGAGAGAAGCAAGGTCCAGAATGGCCA...GGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TTTCTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGCCTCATTCTTCCTCATaGTGGGGAGTGAGAAGGGCG +
Preference number: 5 (lower is better)
Translates to: FLYASGSLKSPPPFRRHVPHSSS*WGVRRA
Trigger: CGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGG...CACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGAAACACAGGCCACAGTaGGGGCTGCTTATGGCATAC +
Preference number: 5 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQKHRPQ*GLLMAY
Trigger: GTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTT...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GGGCAACTTGTTTTGACAAACACTGAGGGCAATCCCCAAGAGTCTGGAGGGTCTACATTTATTCTGAGCTaGCTTTCTGTTCCATCATTG +
Preference number: 5 (lower is better)
Translates to: GQLVLTNTEGNPQESGGSTFILS*LSVPSL
Trigger: CAATGATGGAACAGAAAGCAAGCTCAGAATAAATGT...AGACCCTCCAGACTCTTGGGGATTGCCCTCAGTGTTTGTCAAAACAAGTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TGGAACCTTAACTTGGTGCATCATCCTGGCAGAACAAGCATGTGTCTTCTTCTTGGTGTTGCTGACAATTaGCAGGAACTCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WNLNLVHHPGRTSMCLLLGVADN*QELFFR
Trigger: CCTGAAGAAGAGTTCCTGCAAATTGTCAGCAACACC...AAGAAGAAGACACATGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp CTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACGCGCTGATTTTCACCTaGGTGTTGCTGACAATTTGC +
Preference number: 5 (lower is better)
Translates to: LLSSLQGQAFISAIWNLNALIFT*VLLTIC
Trigger: GCAAATTGTCAGCAACACCAAGGTGAAAATCAGCGC...GTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS TCA 90 bp ACCAGCTGGTGGAAGGGAGGACCCTCCTTTAAGAAGCACAGGATTTaGCTTTGCAATTGTTACCTCAAACTTTCACAAATCAGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: TSWWKGGPSFKKHRI*LCNCYLKLSQIRPF
Trigger: AAAAGGCCTGATTTGTGAAAGTTTGAGGTAACAATTGCAAAGTCAAATCCTGTGCTTCTTAAAGGAGGGTCCTCCCTTCCACCAGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS TCA 90 bp TTTGAGTTTCTTATCACACGGCTCCATTCTGAACTTGGTGCAGACTaGACTTGTATATGCAGACTGCTTGGGCAGTGGTCTATTCTGTGT +
Preference number: 5 (lower is better)
Translates to: FEFLITRLHSELGAD*TCICRLLGQWSILC
Trigger: ACACAGAATAGACCACTGCCCAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAGAATGGAGCCGTGTGATAAGAAACTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CCA 90 bp CATGACCGATGTACAGAGATATTGAATGTCATTAGATCGGTGTCCTaGACCACCATGATCTCTGTGGGTCATCTTACTTTCACTCTTGTC +
Preference number: 5 (lower is better)
Translates to: HDRCTEILNVIRSVS*TTMISVGHLTFTLV
Trigger: GACAAGAGTGAAAGTAAGATGACCCACAGAGATCATGGTGGTCCAGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674873.1
CDS-3UTR CAA 90 bp TTGTGTCATGAGGATGGATCCATTATAAATAGCTTGATGCCCTCCCCACAGAAATTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: LCHEDGSIINSLMPSPQKLDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...TTTCTGTGGGGAGGGCATCAAGCTATTTATAATGGATCCATCCTCATGACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CAA 90 bp TTTGCCCTGAAGACTGGCTTCCAAAGATTCTTACTGTGCTTCATAGAAGATGACTTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: FALKTGFQRFLLCFIEDDLDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...GTCATCTTCTATGAAGCACAGTAAGAATCTTTGGAAGCCAGTCTTCAGGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp CAAGTGTCATCTCCAGTGTTAGAGGTGGGAGATAGCAGTGTTTGTGTCATGAGGCGATGTACAGAGATATaGAATGTCATTAGATCGGTG +
Preference number: 5 (lower is better)
Translates to: QVSSPVLEVGDSSVCVMRRCTEI*NVIRSV
Trigger: CACCGATCTAATGACATTCAATATCTCTGTACATCG...CCTCATGACACAAACACTGCTATCTCCCACCTCTAACACTGGAGATGACACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CAA 90 bp ATCAACTTAGTTCACACAGAGAGGCCCTTCAAAGACTGCAGAGAGGAGTTCGCACGATGTACAGAGATATaGAATGTCATTAGATCGGTG +
Preference number: 5 (lower is better)
Translates to: INLVHTERPFKDCREEFARCTEI*NVIRSV
Trigger: CACCGATCTAATGACATTCAATATCTCTGTACATCG...TGCGAACTCCTCTCTGCAGTCTTTGAAGGGCCTCTCTGTGTGAACTAAGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTCCGGCACCATGTTGCTaGTACACCATGTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLPAPCC*YTMCLL
Trigger: AAGAAGACACATGGTGTACAAGCAACATGGTGCCGG...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACTGGGATGCTCAAGCTaGGTTGGGGGAGAGGTATCT +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLLGCSS*VGGEVS
Trigger: AGATACCTCTCCCCCAACCAAGCTTGAGCATCCCAG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAAGACAAGGAGATCCCTaGGGTGCCTACACCACAAGG +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVRQGDP*GAYTTR
Trigger: CCTTGTGGTGTAGGCACCCAAGGGATCTCCTTGTCT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGGAGACAGAAGAGGGTaGCAAATGGGCTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LISKCKRMKTITNSLSDHGDRRG*QMGSPS
Trigger: TGAAGGAGAGCCCATTTGCAACCCTCTTCTGTCTCC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATACTGATATAGTTCAATaGTCCTTGAGGGCAACTTGT +
Preference number: 5 (lower is better)
Translates to: ASSNWKNRVCSPRACIVHTDIVQ*SLRATC
Trigger: ACAAGTTGCCCTCAAGGACAATTGAACTATATCAGT...ATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp TTTCTTTATGCTTCAGGAAGTTTAAAATCTCCTCCACCTTTCAGAAGGCATGTGAAACACAGGCCACAGTaGGGGCTGCTTATGGCATAC +
Preference number: 5 (lower is better)
Translates to: FLYASGSLKSPPPFRRHVKHRPQ*GLLMAY
Trigger: GTATGCCATAAGCAGCCCCAACTGTGGCCTGTGTTT...CACATGCCTTCTGAAAGGTGGAGGAGATTTTAAACTTCCTGAAGCATAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS CCA 90 bp GTCCAGTTAATTGTATTCGTTTCCGTCAAGCATGTACACAGTCTGTaGAATGCTTATGACAGAGGTGACTTTTCTTCCAGTTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: VQLIVFVSVKHVHSL*NAYDRGDFSSSSKL
Trigger: GAGCTTGGAACTGGAAGAAAAGTCACCTCTGTCATAAGCATTCCACAGACTGTGTACATGCTTGACGGAAACGAATACAATTAACTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp TTGATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGTTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: LIFVPSKSHVQVSSPVLELDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...CTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000523211.5
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTG +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDRCTEI*NVIRSV
Trigger: CACCGATCTAATGACATTCAATATCTCTGTACATCG...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGCGATGTACAGAGATATaGAATGTCATTAGATCGGTG +
Preference number: 5 (lower is better)
Translates to: PTGRIEYAVQEPALSISERCTEI*NVIRSV
Trigger: CACCGATCTAATGACATTCAATATCTCTGTACATCG...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTCTTCGAATGGATCGATaGTGTCTGTTTGGTGTAAGG +
Preference number: 5 (lower is better)
Translates to: DICPLQISCSSVISSVRGLRMDR*CLFGVR
Trigger: CCTTACACCAAACAGACACAATCGATCCATTCGAAG...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGAAATGTTCTGCATTTaGATTGAGGCCTTGGTTACA +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESREMFCI*IEALVT
Trigger: TGTAACCAAGGCCTCAATCAAAATGCAGAACATTTC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACACTGGCTATGGCTCTaGCCCCTGTGTACAGATACA +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRHWLWL*PLCTDT
Trigger: TGTATCTGTACACAGGGGCAAGAGCCATAGCCAGTG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACGGAAGGCTAAGATACTaGGGGATATACACATTTAGA +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDGRLRY*GIYTFR
Trigger: TCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAAAGAAGTCAATATTTaGCTAGGGCAAAGTGTCGAG +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDKEVNI*LGQSVE
Trigger: CTCGACACTTTGCCCTAGCAAAATATTGACTTCTTT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAAAAGCCACAAGAGATaGGGGGCTAATATTCAACAT +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDKSHKR*GANIQH
Trigger: ATGTTGAATATTAGCCCCCAATCTCTTGTGGCTTTT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACTTTCGTACCCCAGAGTaGTCTGGAATGCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LISKCKRMKTITNSLSDHFRTPE*SGMPER
Trigger: TCTCTCTGGCATTCCAGACAACTCTGGGGTACGAAA...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACCACTCCCCAAGCTTTTaGCACAAGACAGATGGTCAC +
Preference number: 5 (lower is better)
Translates to: LISKCKRMKTITNSLSDHHSPSF*HKTDGH
Trigger: GTGACCATCTGTCTTGTGCAAAAAGCTTGGGGAGTG...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGATCTGTCAGAAGTGCTTaGGTTTGTATAAAATGGGTG +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRSVRSA*VCIKWV
Trigger: CACCCATTTTATACAAACCAAAGCACTTCTGACAGA...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ATTGCAATAATCAAGCAGCCCTACCTACATGCTGGGTCTTTCCATTTTTATCGAGTTTTTGGAGAGCGATaGCCAAAGCTCTTACCTCCA +
Preference number: 5 (lower is better)
Translates to: IAIIKQPYLHAGSFHFYRVFGER*PKLLPP
Trigger: TGGAGGTAAGAGCTTTGGCAATCGCTCTCCAAAAAC...TCGATAAAAATGGAAAGACCCAGCATGTAGGTAGGGCTGCTTGATTATTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp GCCAAAGCTGACTTGAGTTTCCAAGGGTTTTTGGAGAGCGATTGCCAAAGCTCTCTCATGTTCAGCTTATaGTTTTTCCCCTCATGTATT +
Preference number: 5 (lower is better)
Translates to: AKADLSFQGFLESDCQSSLMFSL*FFPSCI
Trigger: AATACATGAGGGGAAAAACAATAAGCTGAACATGAG...AGAGCTTTGGCAATCGCTCTCCAAAAACCCTTGGAAACTCAAGTCAGCTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS-3UTR CAA 90 bp AATGTTAAGCCAGTTCCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCACATCTTCTTTCCAGTTaGCAAGGACAGGCATTTATC +
Preference number: 5 (lower is better)
Translates to: NVKPVPTGRIEYAVQEPAHLLSS*QGQAFI
Trigger: GATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG...TGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGGAACTGGCTTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp AAGAGACTCAATTCCAAAATTTATGTGCCTTTGAAAAAGTATGGCCATTCTGGACCTCATTCTTCCTCATaGTGGGGAGTGAGAAGGGCG +
Preference number: 5 (lower is better)
Translates to: KRLNSKIYVPLKKYGHSGPHSSS*WGVRRA
Trigger: CGCCCTTCTCACTCCCCACAATGAGGAAGAATGAGG...TCCAGAATGGCCATACTTTTTCAAAGGCACATAAATTTTGGAATTGAGTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp AAGGACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTGCATCATCCTGACTGATATAGTTCAATaGTCCTTGAGGGCAACTTGT +
Preference number: 5 (lower is better)
Translates to: KDRHLSQPSGTLTWCIILTDIVQ*SLRATC
Trigger: ACAAGTTGCCCTCAAGGACAATTGAACTATATCAGT...CAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS-3UTR CAA 90 bp CTTCTCTCATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATGTCCAAGAGCCTGCATaGTCCATATCAGAGTTTACC +
Preference number: 5 (lower is better)
Translates to: LLSFPSIIIFFPVCKDRHVQEPA*SISEFT
Trigger: GGTAAACTCTGATATGGACAATGCAGGCTCTTGGAC...ATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAATGAGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS GCA 90 bp TCCCTGCTTCTCTTCCTCTTTTCTCTTCTCTCTCCATGTTCACCATaGTGTTCCAAGGCCAGTTATAAAGTCCATTCTTGTTTGGTTTAT +
Preference number: 5 (lower is better)
Translates to: SLLLFLFSLLSPCSP*CSKASYKVHSCLVY
Trigger: ATAAACCAAACAAGAATGGACTTTATAACTGGCCTTGGAACAGCATGGTGAACATGGAGAGAGAAGAGAAAAGAGGAAGAGAAGCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CCA 90 bp AATAACAGTTGTCTATGTAATTATGTTATCACAATGCCAGGGGTTTaGTCTAGGTCCTGTTGCTTGCTGCACAGAAAGCCAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: NNSCLCNYVITMPGV*SRSCCLLHRKPITE
Trigger: CTCAGTGATTGGCTTTCTGTGCAGCAAGCAACAGGACCTAGACCAAACCCCTGGCATTGTGATAACATAATTACATAGACAACTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS-3UTR CAA 90 bp ACTCTATTAGTTCACCTGAGAGCTGATTGCTTAAAAGAGCATGACGTCTCTCTTTGGCTTTTGATGAGCTaGCAGGATCTTAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: TLLVHLRADCLKEHDVSLWLLMS*QDLRGR
Trigger: TCTTCCTCTAAGATCCTGCAAGCTCATCAAAAGCCA...AAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTGAACTAATAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAGCTGGATCCATTATTaGTACCTATTTATCAGCTGT +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDSWIHY*YLFISC
Trigger: ACAGCTGATAAATAGGTACAAATAATGGATCCAGCT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACTGGAAAGAACGTATCTaGGGCAAAAATGTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDWKERI*GKNVKL
Trigger: TAACTTGACATTTTTGCCCAAGATACGTTCTTTCCA...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCCTAGAAGAAAACCTAAGCAATACCATTCAGGACACAGGCATGGGCAAAGACAAGATGATTCAAGTTTaGCCTGCCACCAAATTTTTC +
Preference number: 5 (lower is better)
Translates to: TLEENLSNTIQDTGMGKDKMIQV*PATKFF
Trigger: GAAAAATTTGGTGGCAGGCAAAACTTGAATCATCTT...GTCTTTGCCCATGCCTGTGTCCTGAATGGTATTGCTTAGGTTTTCTTCTAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATATTCTTCACTGCAAAGTaGGGGGTGGACCAAGTTTTG +
Preference number: 5 (lower is better)
Translates to: PTQMPINVRTDKENVAHIFFTAK*GVDQVL
Trigger: CAAAACTTGGTCCACCCCCAACTTTGCAGTGAAGAA...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTACTGGAAGCACTCCCTTaGAAAACTGGCGCAAGACAA +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVLEALP*KTGARQ
Trigger: TTGTCTTGCGCCAGTTTTCAAAGGGAGTGCTTCCAG...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTCCTATCTTCAGTTTTGCCAGGGCCACTTCTGAGGAGAGCTATTGAATCTAGAGACTTTAACACTCCATaGTGTGTATTAGACAGATCA +
Preference number: 5 (lower is better)
Translates to: VLSSVLPGPLLRRAIESRDFNTP*CVLDRS
Trigger: TGATCTGTCTAATACACACAATGGAGTGTTAAAGTC...TCTAGATTCAATAGCTCTCCTCAGAAGTGGCCCTGGCAAAACTGAAGATAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATGGAAGCAAGTTTGTTTaGAGTGTGGGCAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYGSKFV*SVGKIL
Trigger: CAAGATCTTGCCCACACTCAAAACAAACTTGCTTCC...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTTCTGCTCAGCAATACTATGCAAAATGGATGCTTCCCACTCTGTCCTGTCATAGTTCAATTGTCCTaGAGGGCAACTTGTTTTGAC +
Preference number: 5 (lower is better)
Translates to: FFLLSNTMQNGCFPLCPVIVQLS*RATCFD
Trigger: GTCAAAACAAGTTGCCCTCAAGGACAATTGAACTAT...GACAGGACAGAGTGGGAAGCATCCATTTTGCATAGTATTGCTGAGCAGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp CCAACTGGAAGAATAGAGTATGCAGTCCAAGAGCCTGCATTGTCCATATCAGAGACATTTATTCTGAGCTaGCTTTCTGTTCCATCATTG +
Preference number: 5 (lower is better)
Translates to: PTGRIEYAVQEPALSISETFILS*LSVPSL
Trigger: CAATGATGGAACAGAAAGCAAGCTCAGAATAAATGT...CTCTGATATGGACAATGCAGGCTCTTGGACTGCATACTCTATTCTTCCAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674746.1
ENST00000675749.1
CDS GCA 90 bp AACTTTCTGAGAATAACAGTTGTCTATGTAATTATGTTATCACAATaGCAGGGGTTTGGTCTAGGTCCTGTTGCTTGCTGCACAGAAAGC +
Preference number: 5 (lower is better)
Translates to: NFLRITVVYVIMLSQ*QGFGLGPVACCTES
Trigger: GCTTTCTGTGCAGCAAGCAACAGGACCTAGACCAAACCCCTGGCATTGTGATAACATAATTACATAGACAACTGTTATTCTCAGAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATTAGATCGGTGTCCTTaGAGAGTCCACCTACTTCCA +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRLDRCP*RVHLLP
Trigger: TGGAAGTAGGTGGACTCTCAAAGGACACCGATCTAA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATTTTTGAGACAAGGTTaGGCTCCATCTCCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVFLRQG*APSPRL
Trigger: CAACCTGGGAGATGGAGCCAAACCTTGTCTCAAAAA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAACGGGGCAAATGGAATaGCTGAGGTCCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLTGQME*LRSFSM
Trigger: CATTGAAAAGGACCTCAGCAATTCCATTTGCCCCGT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAAATCATCAGGAGGCTaGTCTAGGGCATGTGGGATT +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRKSSGG*SRACGI
Trigger: AATCCCACATGCCCTAGACAAGCCTCCTGATGATTT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTACGGTCCTTAGTTCTGTaGTGGATACATAAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLRSLVL*WIHKVA
Trigger: GGCAACCTTATGTATCCACAACAGAACTAAGGACCG...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGCTTATTTTGTCCATTaGCTCCTTCATCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLAYFVH*LLHPEP
Trigger: GGGCTCTGGATGAAGGAGCAAATGGACAAAATAAGC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GATATTTGTCCCCTCCAAATCTCATGTTCAAGTGTCATCTCCAGTGTTAGAGGTAAGATTAGGAAGATGTaGAATCTGGGGTTTAGAATG +
Preference number: 5 (lower is better)
Translates to: DICPLQISCSSVISSVRGKIRKM*NLGFRM
Trigger: CATTCTAAACCCCAGATTCAACATCTTCCTAATCTT...ACCTCTAACACTGGAGATGACACTTGAACATGAGATTTGGAGGGGACAAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523211.5
CDS-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACAAAGAAAAGCTGATGTaGCTCACACGTGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: LISKCKRMKTITNSLSDHKEKLM*LTRECL
Trigger: GAGACATTCACGTGTGAGCAACATCAGCTTTTCTTT...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCATAGTTCCACTTCATaGATGAGGAAAACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYHSSTS*MRKTVV
Trigger: CACTACAGTTTTCCTCATCAATGAAGTGGAACTATG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTTCCTTCCTGTCTCCTaGTCCATTCCCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCFLPVS*SIPFLS
Trigger: AGAAAGAAAGGGAATGGACAAGGAGACAGGAAGGAA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGCACAGACTGGCAAATaGGATAAAGAGTCAAAACCC +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLAQTGK*DKESKP
Trigger: GGGTTTTGACTCTTTATCCAATTTGCCAGTCTGTGC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAAGCCAGAGAGAAAAGTaGGGTTACCTACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVSQREK*GYLQRE
Trigger: TTCCCTTTGTAGGTAACCCAACTTTTCTCTCTGGCT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ACCAGTACCAGCCACTGCAAAAACATTCCAAAATGTAAAGACCATCGACACTATCTAAGATCCACTGGATaGAAATTCTTACTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TSTSHCKNIPKCKDHRHYLRSTG*KFLLPA
Trigger: TGCTGGAAGTAAGAATTTCAATCCAGTGGATCTTAG...ATAGTGTCGATGGTCTTTACATTTTGGAATGTTTTTGCAGTGGCTGGTACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAAACAGAAACGCCACATaGAAAGGGCTCTCCATTCAA +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRNRNAT*KGLSIQ
Trigger: TTGAATGGAGAGCCCTTTCAATGTGGCGTTTCTGTT...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGACAGAAGTGCTTTGGTTaGTATAAAATGGGTGACCGC +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRQKCFG*YKMGDR
Trigger: GCGGTCACCCATTTTATACAAACCAAAGCACTTCTG...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACAGCAACCTGTGCCTTaGAAATATAATGAAATGCCC +
Preference number: 5 (lower is better)
Translates to: PTQMPINVRTDKENVAHIQQPVP*KYNEMP
Trigger: GGGCATTTCATTATATTTCAAAGGCACAGGTTGCTG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TGTGAAATTGAAGAGAAGCACATGGGACCAATGAAATGCTCAATGTTAAGCCAGACTGATATAGTTCAATaGTCCTTGAGGGCAACTTGT +
Preference number: 5 (lower is better)
Translates to: CEIEEKHMGPMKCSMLSQTDIVQ*SLRATC
Trigger: ACAAGTTGCCCTCAAGGACAATTGAACTATATCAGT...CTGGCTTAACATTGAGCATTTCATTGGTCCCATGTGCTTCTCTTCAATTTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674732.1
ENST00000674746.1
ENST00000675749.1
CDS-3UTR CAA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAGACAGATGACAGCCTaGGTATATTTTGTTAGAGCC +
Preference number: 5 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCRQMTA*VYFVRA
Trigger: GGCTCTAACAAAATATACCAAGGCTGTCATCTGTCT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAAAGGATATTCAGGACTaGAACTCACCTCTTGACCAA +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVKDIQD*NSPLDQ
Trigger: TTGGTCAAGAGGTGAGTTCAAGTCCTGAATATCCTT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTAAGAGTCAAAACCCATaGGTGTGTTGTATTCGAGAC +
Preference number: 5 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCKSQNP*VCCIRD
Trigger: GTCTCGAATACAACACACCAATGGGTTTTGACTCTT...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAACACAACGCAAGTTTaGATGAAGGAACCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLNTTQV*MKEPES
Trigger: GCTTTCTGGTTCCTTCATCAAAACTTGCGTTGTGTT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGCCCAAACTTCCTTTTaGACAAAGATTAACAGGACC +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLAQTSF*TKINRT
Trigger: GGTCCTGTTAATCTTTGTCAAAAAGGAAGTTTGGGC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTTCTAGCATCATAGATTaGCAGGGGCCCTTTAATGAA +
Preference number: 5 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCSSIID*QGPFNE
Trigger: TTCATTAAAGGGCCCCTGCAAATCTATGATGCTAGA...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAGTATCTTGTGGGTATaGTCAGTTTTACACACCGGA +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLSILWV*SVLHTG
Trigger: TCCGGTGTGTAAAACTGACAATACCCACAAGATACT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGATTTTCTTAGGGCCTaGAGGGTTAATACACCTCTT +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLDFLRA*RVNTPL
Trigger: AAGAGGTGTATTAACCCTCAAGGCCCTAAGAAAATC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAGATCAAGAGACATCTTaGCTGGCAAGCAATCTAAGA +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVDQETS*LASNLR
Trigger: TCTTAGATTGCTTGCCAGCAAAGATGTCTCTTGATC...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp ATTCCCTTCTATAATCATCTTCTTTCCAGTTTGCAAGGACAGGCATTTATCTCACATCTTCTTTCCAGTTaGCAAGGACAGGCATTTATC +
Preference number: 5 (lower is better)
Translates to: IPFYNHLLSSLQGQAFISHLLSS*QGQAFI
Trigger: GATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATG...TGAGATAAATGCCTGTCCTTGCAAACTGGAAAGAAGATGATTATAGAAGGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674732.1
ENST00000675749.1
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGATCAAATCATTTAAACTaGGGCAAGGTTTTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRSNHLN*GKVFPA
Trigger: AGCTGGGAAAACCTTGCCCAAGTTTAAATGATTTGA...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGACAATCTTTATGGATaGCTGAGGTTGGAGATTGAA +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRDNLYG*LRLEIE
Trigger: TTCAATCTCCAACCTCAGCAATCCATAAAGATTGTC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CAATACGAGGAAGCTAAGAACCTTGATAAAAGGTTAGAGGAATTGCTAACTAGAGCAGATCAATCTAACTaGTTTCTGATGAGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: QYEEAKNLDKRLEELLTRADQSN*FLMSGK
Trigger: TTTGCCACTCATCAGAAACAAGTTAGATTGATCTGC...TCTAGTTAGCAATTCCTCTAACCTTTTATCAAGGTTCTTAGCTTCCTCGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTAATCTGCAAAGGAATTTaGGGGTGGATTTATTCACCA +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVICKGI*GWIYSP
Trigger: TGGTGAATAAATCCACCCCAAAATTCCTTTGCAGAT...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAAATTTACTTCAACCATaGTGGATGACAGTGTGGCAA +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLNLLQP*WMTVWQ
Trigger: TTGCCACACTGTCATCCACAATGGTTGAAGTAAATT...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CTCATCAGCAAATGCAAAAGAATGAAAACCATAACAAACAGTCTCTCAGACCACGCAATTTCAGCAAAGTaGCAGGATACAAAATCAATG +
Preference number: 5 (lower is better)
Translates to: LISKCKRMKTITNSLSDHAISAK*QDTKSM
Trigger: CATTGATTTTGTATCCTGCAACTTTGCTGAAATTGC...GTGGTCTGAGAGACTGTTTGTTATGGTTTTCATTCTTTTGCATTTGCTGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp CCAACCCAAATGCCCATCAATGTTAGAACGGATAAAGAAAATGTGGCACATATACAAGTCAGTAGTATCTaGTGGGTATTGTCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: PTQMPINVRTDKENVAHIQVSSI*WVLSVL
Trigger: TAAAACTGACAATACCCACAAGATACTACTGACTTG...TATATGTGCCACATTTTCTTTATCCGTTCTAACATTGATGGGCATTTGGGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GGAAGGCTAAGATACTTGGGGATATACACATTTAGAGATTTTCCTAAGAGATGTCAGAATAGACCATATTaGGGGACACAATTCGTTTTA +
Preference number: 5 (lower is better)
Translates to: GRLRYLGIYTFRDFPKRCQNRPY*GTQFVL
Trigger: TAAAACGAATTGTGTCCCCAAATATGGTCTATTCTG...ACATCTCTTAGGAAAATCTCTAAATGTGTATATCCCCAAGTATCTTAGCCTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp TTCTTATTTATCTCTCGTACTCCTGACTTCCCAAGCACTGATGTTGATTATGTATCTGTCAGTTCACTTTaGGGCATAATATCCTTAAGT +
Preference number: 5 (lower is better)
Translates to: FLFISRTPDFPSTDVDYVSVSSL*GIISLS
Trigger: ACTTAAGGATATTATGCCCAAAAGTGAACTGACAGA...TACATAATCAACATCAGTGCTTGGGAAGTCAGGAGTACGAGAGATAAATAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS-3UTR CAA 90 bp GTAGTATCTTGTGGGTATTGTCAGTTTTACACACCGGAGAGAAAATTAGACTTAGACTTTAGCACTGATTaGCAAAATCAATTCCTTAGG +
Preference number: 5 (lower is better)
Translates to: VVSCGYCQFYTPERKLDLDFSTD*QNQFLR
Trigger: CCTAAGGAATTGATTTTGCAAATCAGTGCTAAAGTC...TAAGTCTAATTTTCTCTCCGGTGTGTAAAACTGACAATACCCACAAGATACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS CAA 90 bp GCGGCCGCCGCTCGCGGCTCCAGGGCTCGGGGCTCGCGCCCGCCTTaGTTAGTTTCCCGGCGGGGCGGGCCGAGGTCAGTGCGGTGCGCA +
Preference number: 6 (lower is better)
Translates to: AAAARGSRARGSRPP*LVSRRGGPRSVRCA
Trigger: TGCGCACCGCACTGACCTCGGCCCGCCCCGCCGGGAAACTAACAAAGGCGGGCGCGAGCCCCGAGCCCTGGAGCCGCGAGCGGCGGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000519049.6
ENST00000523367.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000675749.1
CDS GCA 72 bp TTAGTTTCCCGGCGGGGCGGGCCGAGGTCAGTGCGGTaGGCACGACCCGAGCGTCTGGCGGGGGTCCCTGCG +
Preference number: 6 (lower is better)
Translates to: LVSRRGGPRSVR*ARPERLAGVPA
Trigger: CGCAGGGACCCCCGCCAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGGCCCGCCCCGCCGGGAAACTAA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519049.6
ENST00000523367.1
ENST00000674732.1
CDS GCA 72 bp AGCCCATGGTGCCGGCGGCGTCCGAGCGGCGCTGACTaGCAGAGATCCTCGTCCTCCGCCGCTGCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPWCRRRPSGAD*QRSSSSAAAAS
Trigger: GGAGGCAGCAGCGGCGGAGGACGAGGATCTCTGGCAGTCAGCGCCGCTCGGACGCCGCCGGCACCATGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000524201.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000675749.1
CDS CCA 72 bp GGCCGAGGTCAGTGCGGTGCGCACGACCCGAGCGTCTaGCGGGGGTCCCTGCGTCCCACTGTGCAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: GRGQCGAHDPSV*RGSLRPTVQVC
Trigger: ACAGACCTGCACAGTGGGACGCAGGGACCCCCGCCAGACGCTCGGGTCGTGCGCACCGCACTGACCTCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519049.6
ENST00000523367.1
ENST00000674732.1
CDS GCA 72 bp GCGGTGCGCACGACCCGAGCGTCTGGCGGGGGTCCCTaGGTCCCACTGTGCAGGTCTGTTTCTTGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: AVRTTRASGGGP*VPLCRSVSWGG
Trigger: CCCTCCCCAAGAAACAGACCTGCACAGTGGGACGCAGGGACCCCCGCCAGACGCTCGGGTCGTGCGCACCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519049.6
ENST00000523367.1
ENST00000674732.1
CDS CCA 72 bp GGGAGGGGAGTATGTAGGAGGTGGGCGTCTGGAAAGTaGAGTGGGCTGTCTGGGTCCGGGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: GRGVCRRWASGK*SGLSGSGCVCV
Trigger: CACACACACACACCCGGACCCAGACAGCCCACTCCACTTTCCAGACGCCCACCTCCTACATACTCCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519049.6
ENST00000674732.1
CDS GCA 72 bp GGTCGGATCCACCGAGGCGCGCAGTCAATGGTCCTTTaGTCCCTAAGTCAAGTTCAGCAGCCGCATTTCTGG +
Preference number: 6 (lower is better)
Translates to: GRIHRGAQSMVL*SLSQVQQPHFW
Trigger: CCAGAAATGCGGCTGCTGAACTTGACTTAGGGAGCAAAGGACCATTGACTGCGCGCCTCGGTGGATCCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS CAA 72 bp GGGTCGGATCCACCGAGGCGCGCAGTCAATGGTCCTTaGCTCCCTAAGTCAAGTTCAGCAGCCGCATTTCTG +
Preference number: 6 (lower is better)
Translates to: GSDPPRRAVNGP*LPKSSSAAAFL
Trigger: CAGAAATGCGGCTGCTGAACTTGACTTAGGGAGCAAAGGACCATTGACTGCGCGCCTCGGTGGATCCGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS CAA 90 bp ATGTCAGGCGGGTCGGATCCACCGAGGCGCGCAGTCAATGGTCCTTaGCTCCCTAAGTCAAGTTCAGCAGCCGCATTTCTGGTTCAATGT +
Preference number: 6 (lower is better)
Translates to: MSGGSDPPRRAVNGP*LPKSSSAAAFLVQC
Trigger: ACATTGAACCAGAAATGCGGCTGCTGAACTTGACTTAGGGAGCAAAGGACCATTGACTGCGCGCCTCGGTGGATCCGACCCGCCTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623646.3
CDS TCA 72 bp GCTCAGGAGAGAGTAGTATTTGGACAGCACTGTGGATaGCCTCCAGGTACTGGAAGTCAACGATGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: AQERVVFGQHCG*PPGTGSQRCSL
Trigger: CAGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTCCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS TCA 72 bp CCACCAAAGAGAGTAGTATTTGGACAGCACTGTGGATaGCCTCCAGGTACTGGAAGTCAACGATGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: PPKRVVFGQHCG*PPGTGSQRCSL
Trigger: CAGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTTTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000623646.3
ENST00000674864.1
ENST00000674873.1
ENST00000675749.1
CDS TCA 72 bp CAGCCTGGTAAGGAACCCCGCCCGTCTTCGCCTTTCTaGGTCCAGTTAATTGTATTCGTTTCCGTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: QPGKEPRPSSPF*VQLIVFVSVKH
Trigger: ATGCTTGACGGAAACGAATACAATTAACTGGACTCAGAAAGGCGAAGACGGGCGGGGTTCCTTACCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS GCA 72 bp TATGACCTACACGACGTTCCTGTAGGATCTTGCCATTaGTCTTTCTTCGGCTCTCCTCTACTGGCTCATGGC +
Preference number: 6 (lower is better)
Translates to: YDLHDVPVGSCH*SFFGSPLLAHG
Trigger: GCCATGAGCCAGTAGAGGAGAGCCGAAGAAAGAGCAATGGCAAGATCCTACAGGAACGTCGTGTAGGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674873.1
CDS CCA 72 bp AGTATTTGGACAGCACTGTGGATGACCTCCAGGTACTaGAAGTCAACGATGCAGCCTGTGACAGAGACGTAC +
Preference number: 6 (lower is better)
Translates to: SIWTALWMTSRY*KSTMQPVTETY
Trigger: GTACGTCTCTGTCACAGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000674873.1
ENST00000675749.1
CDS TCA 72 bp AACAAGCAGAGAGTAGTATTTGGACAGCACTGTGGATaGCCTCCAGGTACTGGAAGTCAACGATGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: NKQRVVFGQHCG*PPGTGSQRCSL
Trigger: CAGGCTGCATCGTTGACTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS GCA 72 bp AAAAGCTTCCTGAGTCCTTTCCAAAAGCTGAGCAGGTaGCGGCACCATGTTGCTTGTACACCATGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: KSFLSPFQKLSR*RHHVACTPCVF
Trigger: GAAGACACATGGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGGAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519049.6
CDS CCA 72 bp TGCATCATCCTGGCAGAACAAGCAGAGAGTAGTATTTaGACAGCACTGTGGATGACCTCCAGGTACTGGAAG +
Preference number: 6 (lower is better)
Translates to: CIILAEQAESSI*TALWMTSRYWK
Trigger: CTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTGCTTGTTCTGCCAGGATGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS CAA 72 bp ATCACAATGCCAGGGGTTTGGTCTAGGTCCTGTTGCTaGCTGCACAGAAAGCCAATCACTGAGACGAACAAG +
Preference number: 6 (lower is better)
Translates to: ITMPGVWSRSCC*LHRKPITETNK
Trigger: CTTGTTCGTCTCAGTGATTGGCTTTCTGTGCAGCAAGCAACAGGACCTAGACCAAACCCCTGGCATTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CAA 90 bp CAACCAGGCCCATGTTCTCTCCACCATGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTGTCCTGGACCACCATGATCTCTGTG +
Preference number: 6 (lower is better)
Translates to: QPGPCSLHHDRCTEI*NVIRSVSWTTMISV
Trigger: CACAGAGATCATGGTGGTCCAGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674873.1
CDS TCA 72 bp CTTATCACACGGCTCCATTCTGAACTTGGTGCAGACTaGACTTGTATATGCAGACTGCTTGGGCAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: LITRLHSELGAD*TCICRLLGQWS
Trigger: AGACCACTGCCCAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAGAATGGAGCCGTGTGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp CAATGCCAGGGGTTTGGTCTAGGTCCTGTTGCTTGCTaGACAGAAAGCCAATCACTGAGACGAACAAGTATT +
Preference number: 6 (lower is better)
Translates to: QCQGFGLGPVAC*TESQSLRRTSI
Trigger: AATACTTGTTCGTCTCAGTGATTGGCTTTCTGTGCAGCAAGCAACAGGACCTAGACCAAACCCCTGGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp CTGAACTTGGTGCAGACTGAACTTGTATATGCAGACTaGTTGGGCAGTGGTCTATTCTGTGTAGACAGGGCA +
Preference number: 6 (lower is better)
Translates to: LNLVQTELVYAD*LGSGLFCVDRA
Trigger: TGCCCTGTCTACACAGAATAGACCACTGCCCAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp AAAAGCTTCCTGAGTCCTTTCCAAAAGCTGAGCAGGTaGCGGCACCATGTTGCTTGTACACCTGGTTTAACA +
Preference number: 6 (lower is better)
Translates to: KSFLSPFQKLSR*RHHVACTPGLT
Trigger: TGTTAAACCAGGTGTACAAGCAACATGGTGCCGGCACCTGCTCAGCTTTTGGAAAGGACTCAGGAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674864.1
CDS CCA 72 bp CAGGCATACACAAAACCCACCAAAGAGAGTAGTATTTaGACAGCACTGTGGATGACCTCCAGGTACTGGAAG +
Preference number: 6 (lower is better)
Translates to: QAYTKPTKESSI*TALWMTSRYWK
Trigger: CTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTTTGGTGGGTTTTGTGTATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000623646.3
ENST00000674864.1
ENST00000674873.1
ENST00000675749.1
CDS CCA 72 bp AGACGAACAAGTATTGCCAGGGAAGAAGCCTTTAATTaGTTGTTGCAGCTGTGGAGAAGGGAGGTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: RRTSIAREEAFN*LLQLWRREVSL
Trigger: GAGACTGACCTCCCTTCTCCACAGCTGCAACAACCAATTAAAGGCTTCTTCCCTGGCAATACTTGTTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CAA 72 bp GAGGTTGGAAAGTCCAAGATGAAGGTTCATGCAGATTaGGTGTCTTGTGAGGGCTGCTCCCTGGTTCATAGA +
Preference number: 6 (lower is better)
Translates to: EVGKSKMKVHAD*VSCEGCSLVHR
Trigger: TCTATGAACCAGGGAGCAGCCCTCACAAGACACCAAATCTGCATGAACCTTCATCTTGGACTTTCCAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CAA 90 bp CAACCAGGCCCATGTTCTCTCCACCATGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTGTCCTTTGAGAGTCCACCTACTTCC +
Preference number: 6 (lower is better)
Translates to: QPGPCSLHHDRCTEI*NVIRSVSFESPPTS
Trigger: GGAAGTAGGTGGACTCTCAAAGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000675749.1
CDS CAA 90 bp ACATATCTGGAGGTTGGAAAGTCCAAGATGAAGGTTCATGCAGATTaGGTGTCTTGTGAGGGCTGCTCCCTGGTTCATAGACAGCACCTT +
Preference number: 6 (lower is better)
Translates to: TYLEVGKSKMKVHAD*VSCEGCSLVHRQHL
Trigger: AAGGTGCTGTCTATGAACCAGGGAGCAGCCCTCACAAGACACCAAATCTGCATGAACCTTCATCTTGGACTTTCCAACCTCCAGATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CAA 90 bp TCCATTCTGAACTTGGTGCAGACTGAACTTGTATATGCAGACTGCTaGGGCAGTGGTCTATTCTGTGTAGACAGGGCAAAGTCACCACTC +
Preference number: 6 (lower is better)
Translates to: SILNLVQTELVYADC*GSGLFCVDRAKSPL
Trigger: GAGTGGTGACTTTGCCCTGTCTACACAGAATAGACCACTGCCCAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CAA 90 bp CAACCAGGCCCATGTTCTCTCCACCATGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTGTCCACCATTATGTATCGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: QPGPCSLHHDRCTEI*NVIRSVSTIMYRGL
Trigger: CAGACCTCGATACATAATGGTGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524201.1
CDS TCA 72 bp TCTTACTTTCACTCTTGTCCCCTACACAGTAATTTCTaGTCCCGTCAGTCCCCTATGCTCAGTCGCATCCAA +
Preference number: 6 (lower is better)
Translates to: SYFHSCPLHSNF*SRQSPMLSRIQ
Trigger: TTGGATGCGACTGAGCATAGGGGACTGACGGGATCAGAAATTACTGTGTAGGGGACAAGAGTGAAAGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674873.1
ENST00000675180.1
CDS GCA 72 bp CAAGTATTGCCAGGGAAGAAGCCTTTAATTGGTTGTTaGAGCTGTGGAGAAGGGAGGTCAGTCTCAAATCCA +
Preference number: 6 (lower is better)
Translates to: QVLPGKKPLIGC*SCGEGRSVSNP
Trigger: TGGATTTGAGACTGACCTCCCTTCTCCACAGCTGCAACAACCAATTAAAGGCTTCTTCCCTGGCAATACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CCA 72 bp GACAGGCATTTATCTCAGCCATCTGGAACCTTAACTTaGTGCATCATCCTGGCAGAACAAGCAGAGAGTAGT +
Preference number: 6 (lower is better)
Translates to: DRHLSQPSGTLT*CIILAEQAESS
Trigger: ACTACTCTCTGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS CAA 72 bp CCATGTTCTCTCCACCATGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTGTCCTGGACCACCATG +
Preference number: 6 (lower is better)
Translates to: PCSLHHDRCTEI*NVIRSVSWTTM
Trigger: CATGGTGGTCCAGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674873.1
CDS CAA 90 bp CATCACTTTGATTTGAGTTTCTTATCACACGGCTCCATTCTGAACTaGGTGCAGACTGAACTTGTATATGCAGACTGCTTGGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: HHFDLSFLSHGSILN*VQTELVYADCLGSG
Trigger: ACCACTGCCCAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAGAATGGAGCCGTGTGATAAGAAACTCAAATCAAAGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS TCA 72 bp ATTTTGGAGAATTTTCACCACAAGTCCATGCAAGCATaGCTTTGCTCCTTTCCATCTCTGTCTCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: ILENFHHKSMQA*LCSFPSLSLLS
Trigger: GGAGAGGAGAGACAGAGATGGAAAGGAGCAAAGTCATGCTTGCATGGACTTGTGGTGAAAATTCTCCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp AGGCATTTATCTCAGCCATCTGGAACCTTAACTTGGTaGATCATCCTGGCAGAACAAGCAGAGAGTAGTATT +
Preference number: 6 (lower is better)
Translates to: RHLSQPSGTLTW*IILAEQAESSI
Trigger: AATACTACTCTCTGCTTGTTCTGCCAGGATGATGCACCAAGTTAAGGTTCCAGATGGCTGAGATAAATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674746.1
CDS CAA 72 bp CCATGTTCTCTCCACCATGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTGTCCTTTGAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: PCSLHHDRCTEI*NVIRSVSFESP
Trigger: TGGACTCTCAAAGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519049.6
ENST00000523211.5
ENST00000523367.1
ENST00000623646.3
ENST00000674732.1
ENST00000674746.1
ENST00000674864.1
ENST00000675749.1
CDS CAA 90 bp TTCTCATTGCCAGCTGGAATCATCTTCAGCTACCATCACTTTGATTaGAGTTTCTTATCACACGGCTCCATTCTGAACTTGGTGCAGACT +
Preference number: 6 (lower is better)
Translates to: FSLPAGIIFSYHHFD*SFLSHGSILNLVQT
Trigger: AGTCTGCACCAAGTTCAGAATGGAGCCGTGTGATAAGAAACTCAAATCAAAGTGATGGTAGCTGAAGATGATTCCAGCTGGCAATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS TCA 72 bp TATTTCTCACATATCTGGAGGTTGGAAAGTCCAAGATaGAGGTTCATGCAGATTTGGTGTCTTGTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: YFSHIWRLESPR*RFMQIWCLVRA
Trigger: AGCCCTCACAAGACACCAAATCTGCATGAACCTTCATCTTGGACTTTCCAACCTCCAGATATGTGAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CCA 72 bp GCAGAAACCTATAGGAAAAATATAGAGAGTAGTATTTaGACAGCACTGTGGATGACCTCCAGGTACTGGAAG +
Preference number: 6 (lower is better)
Translates to: AETYRKNIESSI*TALWMTSRYWK
Trigger: CTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTATATTTTTCCTATAGGTTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523367.1
CDS CCA 72 bp TGTACAGAGATATTGAATGTCATTAGATCGGTGTCCTaGACCACCATGATCTCTGTGGGTCATCTTACTTTC +
Preference number: 6 (lower is better)
Translates to: CTEILNVIRSVS*TTMISVGHLTF
Trigger: GAAAGTAAGATGACCCACAGAGATCATGGTGGTCCAGGACACCGATCTAATGACATTCAATATCTCTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674873.1
CDS CAA 72 bp GATTTGAGTTTCTTATCACACGGCTCCATTCTGAACTaGGTGCAGACTGAACTTGTATATGCAGACTGCTTG +
Preference number: 6 (lower is better)
Translates to: DLSFLSHGSILN*VQTELVYADCL
Trigger: CAAGCAGTCTGCATATACAAGTTCAGTCTGCACCAAGTTCAGAATGGAGCCGTGTGATAAGAAACTCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CAA 72 bp CCAGCTGGAATCATCTTCAGCTACCATCACTTTGATTaGAGTTTCTTATCACACGGCTCCATTCTGAACTTG +
Preference number: 6 (lower is better)
Translates to: PAGIIFSYHHFD*SFLSHGSILNL
Trigger: CAAGTTCAGAATGGAGCCGTGTGATAAGAAACTCAAATCAAAGTGATGGTAGCTGAAGATGATTCCAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp AGAATAACAGTTGTCTATGTAATTATGTTATCACAATaGCAGGGGTTTGGTCTAGGTCCTGTTGCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: RITVVYVIMLSQ*QGFGLGPVACC
Trigger: GCAGCAAGCAACAGGACCTAGACCAAACCCCTGGCATTGTGATAACATAATTACATAGACAACTGTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS CCA 72 bp ATTGTATTCGTTTCCGTCAAGCATGTACACAGTCTGTaGAATGCTTATGACAGAGGTGACTTTTCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: IVFVSVKHVHSL*NAYDRGDFSSS
Trigger: ACTGGAAGAAAAGTCACCTCTGTCATAAGCATTCCACAGACTGTGTACATGCTTGACGGAAACGAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674732.1
CDS CAA 72 bp CCATGTTCTCTCCACCATGACCGATGTACAGAGATATaGAATGTCATTAGATCGGTGTCCACCATTATGTAT +
Preference number: 6 (lower is better)
Translates to: PCSLHHDRCTEI*NVIRSVSTIMY
Trigger: ATACATAATGGTGGACACCGATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524201.1
CDS TCA 72 bp TTGATCTATGTGGGAGGCCTGATTGTTGGTTTCCTTTaGGAGTCCACCTACTTCCAAATAAAAGCAGATAAT +
Preference number: 6 (lower is better)
Translates to: LIYVGGLIVGFL*ESTYFQIKADN
Trigger: ATTATCTGCTTTTATTTGGAAGTAGGTGGACTCTCAAAGGAAACCAACAATCAGGCCTCCCACATAGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676150.1
CDS CCA 72 bp CTTCCCATCTCTGAGAAGTGCAGCTACTACTCTTTGTaGACAAAACTTTCTGAGAATAACAGTTGTCTATGT +
Preference number: 6 (lower is better)
Translates to: LPISEKCSYYSL*TKLSENNSCLC
Trigger: ACATAGACAACTGTTATTCTCAGAAAGTTTTGTCCACAAAGAGTAGTAGCTGCACTTCTCAGAGATGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp TGTGTGCTTAAGGGTATATATATGTGTGTATGTGTGTaGATGTGTGTATGTAAGTCTTCACAGGCTACCTTA +
Preference number: 6 (lower is better)
Translates to: CVLKGIYMCVCV*MCVCKSSQATL
Trigger: TAAGGTAGCCTGTGAAGACTTACATACACACATGCACACACATACACACATATATATACCCTTAAGCACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675180.1
ENST00000676150.1
CDS GCA 72 bp CTTTGTAAGTCCTTTATAATAAACCTGAGAGCTGATTaGTTAAAAGAGCATGACGTCTCTCTTGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: LCKSFIINLRAD*LKEHDVSLAST
Trigger: AGTGGAAGCAAGAGAGACGTCATGCTCTTTTAAGCAATCAGCTCTCAGGTTTATTATAAAGGACTTACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674864.1