RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NKAIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000188580

Ensembl transcript IDs: ENST00000368416.5, ENST00000368417.6, ENST00000476571.1, ENST00000545433.2, ENST00000640160.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTaGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAG +
Preference number: 1 (lower is better)
Translates to: PTRWAAEELAMAGNR*ASTHLLLNFPKAWE
Trigger: CTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CCA 90 bp AACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTTCAGGAAATCCAAGATGGGCGTGTC +
Preference number: 1 (lower is better)
Translates to: NRWASTHLLLNFPKA*EKGACFQEIQDGRV
Trigger: GACACGCCCATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTaGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGA +
Preference number: 1 (lower is better)
Translates to: RCMECRRQSSQTNVP*MTSQLTEANPLGCR
Trigger: TCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR GCA 90 bp ACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGATGGGCGTGTCCTGCATATTTGTCTG +
Preference number: 1 (lower is better)
Translates to: THLLLNFPKAWEKGA*FQEIQDGRVLHICL
Trigger: CAGACAAATATGCAGGACACGCCCATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR TCA 90 bp GTCTCTTTTGGGCCACCATGGAGGCTCTATGGTAAAGCACTTTGCTaGCAGCTGGCACTTTTCTTATACAGACACACTGGAGCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: VSFGPPWRLYGKALC*QLALFLYRHTGAAE
Trigger: CTCAGCAGCTCCAGTGTGTCTGTATAAGAAAAGTGCCAGCTGTCAGCAAAGTGCTTTACCATAGAGCCTCCATGGTGGCCCAAAAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CCA 90 bp TTGGGCCACCATGGAGGCTCTATGGTAAAGCACTTTGCTGACAGCTaGCACTTTTCTTATACAGACACACTGGAGCTGCTGAGCTATTCA +
Preference number: 1 (lower is better)
Translates to: LGHHGGSMVKHFADS*HFSYTDTLELLSYS
Trigger: TGAATAGCTCAGCAGCTCCAGTGTGTCTGTATAAGAAAAGTGCCAGCTGTCAGCAAAGTGCTTTACCATAGAGCCTCCATGGTGGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR GCA 90 bp GGGTTAAGGCAAGTATGTACGGTACAGCCTTTAGGGCAAACAATCTaGCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGT +
Preference number: 1 (lower is better)
Translates to: GLRQVCTVQPLGQTI*HFGLRVQGHHGMFR
Trigger: ACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTTTGCCCTAAAGGCTGTACCGTACATACTTGCCTTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR GCA 90 bp GTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTaGCTAAGTAGCCGTGGTGCTGTCAAGATGTATGGAGTGCAGAAG +
Preference number: 1 (lower is better)
Translates to: VQGHHGMFRLFLQLH*LSSRGAVKMYGVQK
Trigger: CTTCTGCACTCCATACATCTTGACAGCACCACGGCTACTTAGGCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR GCA 90 bp TCCAAAGGCATCTTGTTGCCAACTACGTTAACAGCACAGTTTTTCTaGCACAATAATACAGGAGGGTTGAAATACACTCTAACACACAAC +
Preference number: 1 (lower is better)
Translates to: SKGILLPTTLTAQFF*HNNTGGLKYTLTHN
Trigger: GTTGTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATTGTGGCAGAAAAACTGTGCTGTTAACGTAGTTGGCAACAAGATGCCTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCCAGAGGCCAACCCGCTaGGCTGCAGAGGAGTTAGCA +
Preference number: 2 (lower is better)
Translates to: LPSSQRPTRWAAEELAMAQRPTR*AAEELA
Trigger: TGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CAA 90 bp GCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTaGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: ANPLGCRGVSNGRQP*GINTSPSELSEGLG
Trigger: TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR TCA 90 bp CAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGAAAGGTCCATGGGCTaGCATACTGAAGTCATCTGT +
Preference number: 2 (lower is better)
Translates to: QRPTRWAAEELAMAGNRWERSMG*HTEVIC
Trigger: ACAGATGACTTCAGTATGTCAGCCCATGGACCTTTC...CCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR TCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTGCTTCTTGCTCTTCATaGAATGCAGGAGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVASCSS*NAGGHC
Trigger: GCAGTGGCCTCCTGCATTTCATGAAGAGCAAGAAGC...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVNFPKA*EKGACF
Trigger: AAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTT...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp CAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGAAGATGGGCGTGTCCTaGATATTTGTCTGTTTCAGT +
Preference number: 2 (lower is better)
Translates to: QRPTRWAAEELAMAGNRWKMGVS*IFVCFS
Trigger: ACTGAAACAGACAAATATGCAGGACACGCCCATCTT...CCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR TCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGCTTCTTGCTCTTCATaGAATGCAGGAGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: RQPLGINTSPSELSEGLGASCSS*NAGGHC
Trigger: GCAGTGGCCTCCTGCATTTCATGAAGAGCAAGAAGC...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTTCAGGAAATCCAAGATaGGCGTGTCCTGCATATTTG +
Preference number: 2 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVSGNPR*ACPAYL
Trigger: CAAATATGCAGGACACGCCCATCTTGGATTTCCTGA...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp GGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GCRGVSNGRQPLGINTSPWEKGA*FQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCA...AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGTGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGAT +
Preference number: 2 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWWEKGA*FQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCA...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGATTGCTCTTCATGAAATaGAGGAGGCCACTGCGAAAA +
Preference number: 2 (lower is better)
Translates to: RQPLGINTSPSELSEGLGLLFMK*RRPLRK
Trigger: TTTTCGCAGTGGCCTCCTGCATTTCATGAAGAGCAA...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GVSNGRQPLGINTSPSELWEKGA*FQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCA...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCGCCAACCCGCTGGGCTaGAGAGGAGTTAGCAATGGC +
Preference number: 2 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPANPLG*RGVSNG
Trigger: GCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGC...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGATCTTTGAAAGGTCCATaGGCTGACATACTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: RQPLGINTSPSELSEGLGSLKGP*ADILKS
Trigger: TGACTTCAGTATGTCAGCCCATGGACCTTTCAAAGA...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR TCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCCAACACATCTCCTTCTaGACTTTCCGAAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVQHISF*TFRRPG
Trigger: CCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTG...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCTCTTTGAAAGGTCCATaGGCTGACATACTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: LGINTSPSELSEGLGERGSLKGP*ADILKS
Trigger: TGACTTCAGTATGTCAGCCCATGGACCTTTCAAAGA...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CCA 90 bp AACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAAAAGAGGAGGTCAAGTaGAATTGGTGTGTGCGTGCT +
Preference number: 2 (lower is better)
Translates to: NRWASTHLLLNFPKAWEKKEEVK*NWCVRA
Trigger: AGCACGCACACACCAATTCCACTTGACCTCCTCTTT...TTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CAA 90 bp AGGGGCCTGCTTTCAGGAAATCCAAGATGGGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTG +
Preference number: 2 (lower is better)
Translates to: RGLLSGNPRWACPAY*SVSVRKRRSSGIGV
Trigger: CACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGACAAATATGCAGGACACGCCCATCTTGGATTTCCTGAAAGCAGGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGAAAGAGGAGGTCAAGTaGAATTGGTGTGTGCGTGCT +
Preference number: 2 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTKEEVK*NWCVRA
Trigger: AGCACGCACACACCAATTCCACTTGACCTCCTCTTT...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTATGGCCGGCAACCGTTaGGCATCAACACATCTCCTT +
Preference number: 2 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTMAGNR*ASTHLL
Trigger: AAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCAT...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR TCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCGCTTCTTGCTCTTCATaGAATGCAGGAGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPASCSS*NAGGHC
Trigger: GCAGTGGCCTCCTGCATTTCATGAAGAGCAAGAAGC...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR GCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGTTGCTCTTCATGAAATaGAGGAGGCCACTGCGAAAA +
Preference number: 2 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTLLFMK*RRPLRK
Trigger: TTTTCGCAGTGGCCTCCTGCATTTCATGAAGAGCAA...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR GCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGAATTGGTGTGTGCGTaGTCACGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFELVCA*SRVCVC
Trigger: ACACACACACACACGTGAGCACGCACACACCAATTC...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 90 bp TGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTaGTTTTTGCAATTACATTGCCTAAGTAGCCGTGGTGCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: CHFGLRVQGHHGMFR*FLQLHCLSSRGAVK
Trigger: CTTGACAGCACCACGGCTACTTAGGCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR TCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTGAAAGGTCCATGGGCTaGCATACTGAAGTCATCTGT +
Preference number: 2 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTERSMG*HTEVIC
Trigger: ACAGATGACTTCAGTATGTCAGCCCATGGACCTTTC...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR TCA 90 bp TTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGCATGGGCTGACATACTaGAGTCATCTGTATTATTTT +
Preference number: 2 (lower is better)
Translates to: LAMAGNRWASTHLLLNFPHGLTY*SHLYYF
Trigger: AAAATAATACAGATGACTTCAGTATGTCAGCCCATG...CGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640160.1
3UTR-3UTR CCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCNFPKA*EKGACF
Trigger: AAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTT...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR GCA 90 bp CAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAATTTTGATCTTCGCTTaGAATTCAGCATATCACTTG +
Preference number: 2 (lower is better)
Translates to: QPLGINTSPSELSEGLGEILIFA*NSAYHL
Trigger: CAAGTGATATGCTGAATTGCAAGCGAAGATCAAAAT...TTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640160.1
3UTR-3UTR CCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCTCTTTGAAAGGTCCATaGGCTGACATACTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVSLKGP*ADILKS
Trigger: TGACTTCAGTATGTCAGCCCATGGACCTTTCAAAGA...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTTGCTGTCAAGATGTATaGAGTGCAGAAGACAGAGCT +
Preference number: 2 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFCCQDV*SAEDRA
Trigger: AGCTCTGTCTTCTGCACTCCATACATCTTGACAGCA...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 90 bp TTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTaGCAATTACATTGCCTAAGTAGCCGTGGTGCTGTCAAGATGTAT +
Preference number: 2 (lower is better)
Translates to: FGLRVQGHHGMFRLF*QLHCLSSRGAVKMY
Trigger: ATACATCTTGACAGCACCACGGCTACTTAGGCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR GCA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCTCTTCATGAAATaGAGGAGGCCACTGCGAAAA +
Preference number: 2 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITLLFMK*RRPLRK
Trigger: TTTTCGCAGTGGCCTCCTGCATTTCATGAAGAGCAA...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR GCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTAAGATGGGCGTGTCCTaGATATTTGTCTGTTTCAGT +
Preference number: 2 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFKMGVS*IFVCFS
Trigger: ACTGAAACAGACAAATATGCAGGACACGCCCATCTT...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR TCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTCAACACATCTCCTTCTaGACTTTCCGAAGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCQHISF*TFRRPG
Trigger: CCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTG...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR TCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCAATCGCATCACAGCATaGATGTACAGTGAAACCTCA +
Preference number: 2 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPNRITA*MYSETS
Trigger: TGAGGTTTCACTGTACATTCATGCTGTGATGCGATT...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR GCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATAGAATTGGTGTGTGCGTaGTCACGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIELVCA*SRVCVC
Trigger: ACACACACACACACGTGAGCACGCACACACCAATTC...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCTCAGGAAATCCAAGATaGGCGTGTCCTGCATATTTG +
Preference number: 2 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCSGNPR*ACPAYL
Trigger: CAAATATGCAGGACACGCCCATCTTGGATTTCCTGA...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTATGGCCGGCAACCGTTaGGCATCAACACATCTCCTT +
Preference number: 2 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCMAGNR*ASTHLL
Trigger: AAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCAT...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 90 bp ACTACGTTAACAGCACAGTTTTTCTGCCACAATAATACAGGAGGGTaGAAATACACTCTAACACACAACAGATCCCCCAAATACCACAAA +
Preference number: 2 (lower is better)
Translates to: TTLTAQFFCHNNTGG*KYTLTHNRSPKYHK
Trigger: TTTGTGGTATTTGGGGGATCTGTTGTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATTGTGGCAGAAAAACTGTGCTGTTAACGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTCAAACTAATGTGCCTTaGATGACTTCCCAGCTCACA +
Preference number: 2 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCQTNVP*MTSQLT
Trigger: TGTGAGCTGGGAAGTCATCCAAGGCACATTAGTTTG...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATACACTTTGCTGACAGCTaGCACTTTTCTTATACAGAC +
Preference number: 2 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIHFADS*HFSYTD
Trigger: GTCTGTATAAGAAAAGTGCCAGCTGTCAGCAAAGTG...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAATGGCCGGCAACCGTaGGGCATCAACACATCTCCT +
Preference number: 3 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVNGRQP*GINTSP
Trigger: AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATT...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR TCA 72 bp TGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTaGACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: WPATVGHQHISF*TFRRPGRKGPA
Trigger: AGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CAA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAG +
Preference number: 3 (lower is better)
Translates to: LPSSQRPTRWAAEELAMAACPAY*SVSVRK
Trigger: CTTTCTAACTGAAACAGACAAATATGCAGGACACGC...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CCA 72 bp TGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTaGGCATCAACACATCTCCTTCTGAACTTTCCGAAG +
Preference number: 3 (lower is better)
Translates to: WAAEELAMAGNR*ASTHLLLNFPK
Trigger: CTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CCA 72 bp GAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTaGATGACTTCCCAGCTCACAGAGGCCAACCCGCTG +
Preference number: 3 (lower is better)
Translates to: ECRRQSSQTNVP*MTSQLTEANPL
Trigger: CAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAAACTCAGTTGCTTCTaGCTCTTCATGAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVKLSCF*LFMKCR
Trigger: CCTGCATTTCATGAAGAGCAAGAAGCAACTGAGTTT...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CAA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAG +
Preference number: 3 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVACPAY*SVSVRK
Trigger: CTTTCTAACTGAAACAGACAAATATGCAGGACACGC...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR TCA 72 bp GGGCCACCATGGAGGCTCTATGGTAAAGCACTTTGCTaGCAGCTGGCACTTTTCTTATACAGACACACTGGA +
Preference number: 3 (lower is better)
Translates to: GPPWRLYGKALC*QLALFLYRHTG
Trigger: TCCAGTGTGTCTGTATAAGAAAAGTGCCAGCTGTCAGCAAAGTGCTTTACCATAGAGCCTCCATGGTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CCA 72 bp GCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTTCAGGAAATCCAAGAT +
Preference number: 3 (lower is better)
Translates to: ASTHLLLNFPKA*EKGACFQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CCA 72 bp CTGTCTGCACTGGGATTCTTGGGCACACAATGTAGGTaGGTTAAGGCAAGTATGTACGGTACAGCCTTTAGG +
Preference number: 3 (lower is better)
Translates to: LSALGFLGTQCR*VKASMYGTAFR
Trigger: CCTAAAGGCTGTACCGTACATACTTGCCTTAACCCACCTACATTGTGTGCCCAAGAATCCCAGTGCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR GCA 72 bp CAAGTATGTACGGTACAGCCTTTAGGGCAAACAATCTaGCATTTCGGACTTCGGGTACAAGGTCATCATGGC +
Preference number: 3 (lower is better)
Translates to: QVCTVQPLGQTI*HFGLRVQGHHG
Trigger: GCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTTTGCCCTAAAGGCTGTACCGTACATACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp TTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAG +
Preference number: 3 (lower is better)
Translates to: LAMAGNRWASTHLLLNFPACPAY*SVSVRK
Trigger: CTTTCTAACTGAAACAGACAAATATGCAGGACACGC...CGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR-3UTR CAA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATACCTAAAGGAAGTGGCTaGGGGCTGTCTGCACTGGGA +
Preference number: 3 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIPKGSG*GLSALG
Trigger: TCCCAGTGCAGACAGCCCCAAGCCACTTCCTTTAGG...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTCCTAAAGGAAGTGGCTaGGGGCTGTCTGCACTGGGA +
Preference number: 3 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCPKGSG*GLSALG
Trigger: TCCCAGTGCAGACAGCCCCAAGCCACTTCCTTTAGG...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTAAACTCAGTTGCTTCTaGCTCTTCATGAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFKLSCF*LFMKCR
Trigger: CCTGCATTTCATGAAGAGCAAGAAGCAACTGAGTTT...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTAAACTCAGTTGCTTCTaGCTCTTCATGAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTKLSCF*LFMKCR
Trigger: CCTGCATTTCATGAAGAGCAAGAAGCAACTGAGTTT...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTAATGGCCGGCAACCGTaGGGCATCAACACATCTCCT +
Preference number: 3 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCNGRQP*GINTSP
Trigger: AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATT...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp CTGAGCTATTCAGTCTTGTTCCTTGACATGAAACACACAGGCTTGAACTCATTTGTGTGTGTGTCAGTGTaGTATGTAGAGGCTTTGCAT +
Preference number: 3 (lower is better)
Translates to: LSYSVLFLDMKHTGLNSFVCVSV*YVEALH
Trigger: ATGCAAAGCCTCTACATACAACACTGACACACACAC...AAATGAGTTCAAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR GCA 72 bp CATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTaGCTAAGTAGCCGTGGTGCTGTCAAGATGTATGGA +
Preference number: 3 (lower is better)
Translates to: HHGMFRLFLQLH*LSSRGAVKMYG
Trigger: TCCATACATCTTGACAGCACCACGGCTACTTAGGCAATGTAATTGCAAAAACAAACGAAACATGCCATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATAGTGTGTGTGTCAGTGTaGTATGTAGAGGCTTTGCAT +
Preference number: 3 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIVCVSV*YVEALH
Trigger: ATGCAAAGCCTCTACATACAACACTGACACACACAC...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR-3UTR CAA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCAATAATACAGGAGGGTaGAAATACACTCTAACACAC +
Preference number: 3 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPNNTGG*KYTLTH
Trigger: GTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATT...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR TCA 72 bp CAGCACACTAAGTCCAGAGGATGGTTTAGTTTAACCTaGGGATTTCCTGTTAAAAGTCGCATTAATGAGGAA +
Preference number: 3 (lower is better)
Translates to: QHTKSRGWFSLT*GFPVKSRINEE
Trigger: TTCCTCATTAATGCGACTTTTAACAGGAAATCCTCAGGTTAAACTAAACCATCCTCTGGACTTAGTGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368416.5
3UTR GCA 72 bp ATCTTGTTGCCAACTACGTTAACAGCACAGTTTTTCTaGCACAATAATACAGGAGGGTTGAAATACACTCTA +
Preference number: 3 (lower is better)
Translates to: ILLPTTLTAQFF*HNNTGGLKYTL
Trigger: TAGAGTGTATTTCAACCCTCCTGTATTATTGTGGCAGAAAAACTGTGCTGTTAACGTAGTTGGCAACAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGGGCTCCGGGCTGCTaGTGCTGCCAGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPSSQRPTRWAAEELAMAGAPGC*CCQRPG
Trigger: CCCAGGACGCTGGCAGCAGCAGCAGCCCGGAGCCCC...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR GCA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCTCGGGGGCTCCGGGCTaGTGCTGCTGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LPSSQRPTRWAAEELAMASGAPG*CCCQRP
Trigger: AGGACGCTGGCAGCAGCAGCAGCCCGGAGCCCCCGA...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR GCA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGTTTCCGAGACCCCTaGCACAGCCAGACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPSSQRPTRWAAEELAMAGFRDP*HSQTVP
Trigger: TGGGACAGTCTGGCTGTGGCAGGGGTCTCGGAAACC...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR TCA 90 bp GAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCCAACACATCTCCTTCTaGACTTTCCGAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EANPLGCRGVSNGRQPLGQHISF*TFRRPG
Trigger: CCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTG...GCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTGCCAACCCGCTGGGCTaGAGAGGAGTTAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVANPLG*RGVSNG
Trigger: GCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGC...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp GGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTGTAGCGATGGTCTTCTaGGGCCCAGTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GCRGVSNGRQPLGINTSPVAMVF*GPVWGR
Trigger: CCTGCCCCAGACTGGGCCCCAGAAGACCATCGCTAC...AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGCTAAAGGAAGTGGCTTaGGGCTGTCTGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: QRPTRWAAEELAMAGNRWLKEVA*GCLHWD
Trigger: ATCCCAGTGCAGACAGCCCCAAGCCACTTCCTTTAG...CCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp GGTACAGCCTTTAGGGCAAACAATCTGCCATTTCGGACTTCGGGTACAAGGTCAACAGGCATTAGGACCTaGTGGCGCGGCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GTAFRANNLPFRTSGTRSTGIRT*WRGGGG
Trigger: GCCGCCGCCGCCGCGCCAGCAGGTCCTAATGCCTGT...TGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTTTGCCCTAAAGGCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR CCA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGCAGAGGCCAACCCGCTaGGCTGCAGAGGAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWQRPTR*AAEELA
Trigger: TGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCCCTTCACTCGCTCGGTaGACACGCCGCGCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVPSLAR*TRRAAG
Trigger: GCCCGCGGCGCGGCGTGTGCACCGAGCGAGTGAAGG...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR CCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTATGGCCGGCAACCGTTaGGCATCAACACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVMAGNR*ASTHLL
Trigger: AAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCAT...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCATCTGGAGGGAACTATaGGCCACTTCTATGTACTGG +
Preference number: 4 (lower is better)
Translates to: LPSSQRPTRWAAEELAMAIWREL*ATSMYW
Trigger: CCAGTACATAGAAGTGGCTCATAGTTCCCTCCAGAT...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGATTTGCCAGGATAGGTaGCCACTGATATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QRPTRWAAEELAMAGNRWICQDR*PLISKE
Trigger: TTCCTTGGATATCAGTGGGCACCTATCCTGGCAAAT...CCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAAGTAGCGATGGTCTTCTaGGGCCCAGTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGVSNGRQPLGINTSPSEVAMVF*GPVWGR
Trigger: CCTGCCCCAGACTGGGCCCCAGAAGACCATCGCTAC...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCTTTCAGCCAACCCGCTGGGCTaGAGAGGAGTTAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: NTSPSELSEGLGERGLLSANPLG*RGVSNG
Trigger: GCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGC...TGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWNFPKA*EKGACF
Trigger: AAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTT...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACAGAGGCCAACCCGCTaGGCTGCAGAGGAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: RGVSNGRQPLGINTSPSEQRPTR*AAEELA
Trigger: TGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGCTGCACTGGGATTCTTaGGCACACAATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWLHWDS*AHNVGG
Trigger: CCCACCTACATTGTGTGCCCAAGAATCCCAGTGCAG...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGCACTTTGCTGACAGCTaGCACTTTTCTTATACAGAC +
Preference number: 4 (lower is better)
Translates to: QRPTRWAAEELAMAGNRWHFADS*HFSYTD
Trigger: GTCTGTATAAGAAAAGTGCCAGCTGTCAGCAAAGTG...CCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAATTGGTGTGTGCGTaGTCACGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWELVCA*SRVCVC
Trigger: ACACACACACACACGTGAGCACGCACACACCAATTC...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RQPLGINTSPSELSEGLGNFPKA*EKGACF
Trigger: AAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTT...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CAA 72 bp CTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTaGGGCATCAACACATCTCCTTCTGAACTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LGCRGVSNGRQP*GINTSPSELSE
Trigger: TTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTCTCCAGCAAACACCCTaGGACCGTGATGTAGCGATG +
Preference number: 4 (lower is better)
Translates to: GVSNGRQPLGINTSPSELLQQTP*DRDVAM
Trigger: CATCGCTACATCACGGTCTCAGGGTGTTTGCTGGAG...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCATAACAGGCGTAGATaGAACCTGCCAGTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LGINTSPSELSEGLGERGHNRRR*NLPVRG
Trigger: TCCTCGCACTGGCAGGTTTCATCTACGCCTGTTATG...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCGCTTCTTGCTCTTCATaGAATGCAGGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LGINTSPSELSEGLGERGASCSS*NAGGHC
Trigger: GCAGTGGCCTCCTGCATTTCATGAAGAGCAAGAAGC...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTTCAAGATGTATGGAGTaGAGAAGACAGAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVSRCME*RRQSSQ
Trigger: TTGAGAGCTCTGTCTTCTGCACTCCATACATCTTGA...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTTCTTTGAAAGGTCCATaGGCTGACATACTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVSLKGP*ADILKS
Trigger: TGACTTCAGTATGTCAGCCCATGGACCTTTCAAAGA...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCTGGGGCAGGTGTCACTaGCGTCACCGTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVWGRCH*RHRTSW
Trigger: CCAGGATGTACGGTGACGTCAGTGACACCTGCCCCA...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTGCTTCTTGCTCTTCATaGAATGCAGGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GVSNGRQPLGINTSPSELASCSS*NAGGHC
Trigger: GCAGTGGCCTCCTGCATTTCATGAAGAGCAAGAAGC...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp TTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGCAACACATCTCCTTCTaGACTTTCCGAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LAMAGNRWASTHLLLNFPQHISF*TFRRPG
Trigger: CCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTG...CGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp AACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCTTTCACTAATGTGCCTTGGATaGCTTCCCAGCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NTSPSELSEGLGERGLLSLMCLG*LPSSQR
Trigger: CCTCTGTGAGCTGGGAAGTCATCCAAGGCACATTAG...TGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCACACACTGGAGCTGCTaGGCTATTCAGTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LGINTSPSELSEGLGERGTHWSC*AIQSCS
Trigger: GGAACAAGACTGAATAGCTCAGCAGCTCCAGTGTGT...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAAACATACAACCCACTaGGGAAATTCAAGCATGAGT +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVKHTTH*GNSSMS
Trigger: ACTCATGCTTGAATTTCCTCAGTGGGTTGTATGTTT...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAATATGTACAAAATTTaGCAGGATAGGTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVNMYKI*QDRCPL
Trigger: CAGTGGGCACCTATCCTGGCAAATTTTGTACATATT...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCAAGGACACGCAAACCTaGCGAGGGCTCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPKDTQT*RGLGGS
Trigger: GGAGCCCCCGAGCCCTCGGCAGGTTTGCGTGTCCTT...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR GCA 90 bp CCTTGGATGACTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTTTTTTGCAATTACATTaGCTAAGTAGCCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PWMTSQLTEANPLGCRGVFLQLH*LSSRGA
Trigger: AGCACCACGGCTACTTAGGCAATGTAATTGCAAAAA...AACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAGTCATCCAAGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp GGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTGGCACACAATGTAGGTaGGTTAAGGCAAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: GCRGVSNGRQPLGINTSPGTQCR*VKASMY
Trigger: GTACATACTTGCCTTAACCCACCTACATTGTGTGCC...AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CTTCCCAGCTCACAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCATCCACCAAGATCGGTaGATTGATATATTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LPSSQRPTRWAAEELAMAIHQDR*IDILKV
Trigger: GACTTTTAATATATCAATGCACCGATCTTGGTGGAT...GGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTGTGAGCTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCTTTCAGAATTGGTGTGTGCGTaGTCACGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NTSPSELSEGLGERGLLSELVCA*SRVCVC
Trigger: ACACACACACACACGTGAGCACGCACACACCAATTC...TGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGATCAGGAAATCCAAGATaGGCGTGTCCTGCATATTTG +
Preference number: 4 (lower is better)
Translates to: RQPLGINTSPSELSEGLGSGNPR*ACPAYL
Trigger: CAAATATGCAGGACACGCCCATCTTGGATTTCCTGA...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp AAAGGGGCCTGCTTTCAGGAAATCCAAGATGGGCGTGTCCTGCATATTTGTCTGAACTTTCCGAAGGCCTaGGAGAAAGGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KGACFQEIQDGRVLHICLNFPKA*EKGACF
Trigger: AAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTT...CAGACAAATATGCAGGACACGCCCATCTTGGATTTCCTGAAAGCAGGCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTCAGAGGCCAACCCGCTaGGCTGCAGAGGAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTQRPTR*AAEELA
Trigger: TGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAAGAAAGGTCCATGGGCTaGCATACTGAAGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: RGVSNGRQPLGINTSPSEERSMG*HTEVIC
Trigger: ACAGATGACTTCAGTATGTCAGCCCATGGACCTTTC...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATAGCTCCGGGCTGCTGCTaGTGCCAGCGTCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIAPGCC*CQRPGK
Trigger: CTTCCCAGGACGCTGGCAGCAGCAGCAGCCCGGAGC...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR GCA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCTTGCTCTTCATGAAATaGAGGAGGCCACTGCGAAAA +
Preference number: 4 (lower is better)
Translates to: LGINTSPSELSEGLGERGLLFMK*RRPLRK
Trigger: TTTTCGCAGTGGCCTCCTGCATTTCATGAAGAGCAA...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAATGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RGVSNGRQPLGINTSPSEWEKGA*FQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCA...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGTTTTTGCAATTACATTaGCTAAGTAGCCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWFLQLH*LSSRGA
Trigger: AGCACCACGGCTACTTAGGCAATGTAATTGCAAAAA...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTGCCACTTCTATGTACTaGTACTCCAGCAAACACCCT +
Preference number: 4 (lower is better)
Translates to: GVSNGRQPLGINTSPSELATSMY*YSSKHP
Trigger: AGGGTGTTTGCTGGAGTACCAGTACATAGAAGTGGC...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTCTGCTGCCAGCGTCCTaGGAAGTGACAGGCATTAGG +
Preference number: 4 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTLLPAS*EVTGIR
Trigger: CCTAATGCCTGTCACTTCCCAGGACGCTGGCAGCAG...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR CCA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAAAAAGAGGAGGTCAAGTaGAATTGGTGTGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: RGVSNGRQPLGINTSPSEKEEVK*NWCVRA
Trigger: AGCACGCACACACCAATTCCACTTGACCTCCTCTTT...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTCTCCAGCAAACACCCTaGGACCGTGATGTAGCGATG +
Preference number: 4 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFLQQTP*DRDVAM
Trigger: CATCGCTACATCACGGTCTCAGGGTGTTTGCTGGAG...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp GCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCCTAATGTGCCTTGGATaGCTTCCCAGCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: AISDFGYKVIMACFVCFCLMCLG*LPSSQR
Trigger: CCTCTGTGAGCTGGGAAGTCATCCAAGGCACATTAG...GCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAATTGCTCTTCATGAAATaGAGGAGGCCACTGCGAAAA +
Preference number: 4 (lower is better)
Translates to: RGVSNGRQPLGINTSPSELLFMK*RRPLRK
Trigger: TTTTCGCAGTGGCCTCCTGCATTTCATGAAGAGCAA...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGGAATTGGTGTGTGCGTaGTCACGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTELVCA*SRVCVC
Trigger: ACACACACACACACGTGAGCACGCACACACCAATTC...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR GCA 90 bp CAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAATTAGGGCAAACAATCTaGCATTTCGGACTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: QPLGINTSPSELSEGLGELGQTI*HFGLRV
Trigger: TACCCGAAGTCCGAAATGGCAGATTGTTTGCCCTAA...TTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGGTAGCGATGGTCTTCTaGGGCCCAGTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWVAMVF*GPVWGR
Trigger: CCTGCCCCAGACTGGGCCCCAGAAGACCATCGCTAC...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CCA 90 bp GCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCATGGCCGGCAACCGTTaGGCATCAACACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: AISDFGYKVIMACFVCFCMAGNR*ASTHLL
Trigger: AAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCAT...GCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTGCTGTCAAGATGTATaGAGTGCAGAAGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GVSNGRQPLGINTSPSELCCQDV*SAEDRA
Trigger: AGCTCTGTCTTCTGCACTCCATACATCTTGACAGCA...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAATGCTGTCAAGATGTATaGAGTGCAGAAGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QPLGINTSPSELSEGLGECCQDV*SAEDRA
Trigger: AGCTCTGTCTTCTGCACTCCATACATCTTGACAGCA...TTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 72 bp TGTCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATaGGTGTGTGCGTGCTCACGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CLFQLERGGQVE*VCACSRVCVCV
Trigger: CACACACACACACACACGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGACATGGGCTGACATACTaGAGTCATCTGTATTATTTT +
Preference number: 4 (lower is better)
Translates to: RQPLGINTSPSELSEGLGHGLTY*SHLYYF
Trigger: AAAATAATACAGATGACTTCAGTATGTCAGCCCATG...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGGAAAGGTCCATGGGCTaGCATACTGAAGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTERSMG*HTEVIC
Trigger: ACAGATGACTTCAGTATGTCAGCCCATGGACCTTTC...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp AACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCTTTCAAATCGCATCACAGCATaGATGTACAGTGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: NTSPSELSEGLGERGLLSNRITA*MYSETS
Trigger: TGAGGTTTCACTGTACATTCATGCTGTGATGCGATT...TGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AAAGGGGCCTGCTTTCAGGAAATCCAAGATGGGCGTGTCCTGCATATTTGTCTGTTCTTCACCGGATTTTaGGGAGGATACAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: KGACFQEIQDGRVLHICLFFTGF*GGYSCT
Trigger: TGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAA...CAGACAAATATGCAGGACACGCCCATCTTGGATTTCCTGAAAGCAGGCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGGGTTTCCGAGACCCCTaGCACAGCCAGACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWGFRDP*HSQTVP
Trigger: TGGGACAGTCTGGCTGTGGCAGGGGTCTCGGAAACC...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGATGAAACCTGCCAGTaGGAGGACAATCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFDETCQ*EDNLEG
Trigger: TCCCTCCAGATTGTCCTCGCACTGGCAGGTTTCATC...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGATGGGCGTGTCCTaGATATTTGTCTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LAMAGNRWASTHLLLNFPKMGVS*IFVCFS
Trigger: ACTGAAACAGACAAATATGCAGGACACGCCCATCTT...CGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCTTTGAAAGGTCCATaGGCTGACATACTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GVSNGRQPLGINTSPSELSLKGP*ADILKS
Trigger: TGACTTCAGTATGTCAGCCCATGGACCTTTCAAAGA...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp AACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCTTTCATCTTTGAAAGGTCCATaGGCTGACATACTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NTSPSELSEGLGERGLLSSLKGP*ADILKS
Trigger: TGACTTCAGTATGTCAGCCCATGGACCTTTCAAAGA...TGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CCA 90 bp AACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAATCAGGAAATCCAAGATaGGCGTGTCCTGCATATTTG +
Preference number: 4 (lower is better)
Translates to: NRWASTHLLLNFPKAWEKSGNPR*ACPAYL
Trigger: CAAATATGCAGGACACGCCCATCTTGGATTTCCTGA...TTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCATCTGGAGGGAACTATaGGCCACTTCTATGTACTGG +
Preference number: 4 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVIWREL*ATSMYW
Trigger: CCAGTACATAGAAGTGGCTCATAGTTCCCTCCAGAT...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CTGAGCTATTCAGTCTTGTTCCTTGACATGAAACACACAGGCTTGAACTCATTTGCGTGCACCTGCCACTaGAATAACCCATGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LSYSVLFLDMKHTGLNSFACTCH*NNPWFP
Trigger: CGGAAACCATGGGTTATTGCAGTGGCAGGTGCACGC...AAATGAGTTCAAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR GCA 90 bp GGTACAGCCTTTAGGGCAAACAATCTGCCATTTCGGACTTCGGGTACAAGGTCAACAGCACAGTTTTTCTaGCACAATAATACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTAFRANNLPFRTSGTRSTAQFF*HNNTGG
Trigger: CCCTCCTGTATTATTGTGGCAGAAAAACTGTGCTGT...TGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTTTGCCCTAAAGGCTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCTTATCCAAGGGAATTTaGATGTACATAGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LGINTSPSELSEGLGERGLSKGI*MYIGCS
Trigger: ACTACAGCCTATGTACATGCAAATTCCCTTGGATAA...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640160.1
CDS-3UTR GCA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAATTTTGATCTTCGCTTaGAATTCAGCATATCACTTG +
Preference number: 4 (lower is better)
Translates to: RQPLGINTSPSELSEGLGILIFA*NSAYHL
Trigger: CAAGTGATATGCTGAATTGCAAGCGAAGATCAAAAT...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640160.1
CDS-3UTR CCA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACACACTGCAATAACCCATaGTTTCCGAGACCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITHCNNP*FPRPLP
Trigger: TGGCAGGGGTCTCGGAAACCATGGGTTATTGCAGTG...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR CCA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACAATGGCCGGCAACCGTTaGGCATCAACACATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITMAGNR*ASTHLL
Trigger: AAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCAT...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCCTAAAGGAAGTGGCTTaGGGCTGTCTGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPLKEVA*GCLHWD
Trigger: ATCCCAGTGCAGACAGCCCCAAGCCACTTCCTTTAG...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAATGGGGCAGGTGTCACTaGCGTCACCGTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKWGRCH*RHRTSW
Trigger: CCAGGATGTACGGTGACGTCAGTGACACCTGCCCCA...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCAACACCCTGAGACCGTaGTGTAGCGATGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCNTLRP*CSDGLL
Trigger: CAGAAGACCATCGCTACATCACGGTCTCAGGGTGTT...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCGCTTCTTGCTCTTCATaGAATGCAGGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCASCSS*NAGGHC
Trigger: GCAGTGGCCTCCTGCATTTCATGAAGAGCAAGAAGC...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACAACACACTGGAGCTGCTaGGCTATTCAGTCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITTHWSC*AIQSCS
Trigger: GGAACAAGACTGAATAGCTCAGCAGCTCCAGTGTGT...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAACTTAAAGCAGGAATATaGGGGTTTATTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: QPLGINTSPSELSEGLGELKAGI*GFIFCT
Trigger: GGTACAGAAAATAAACCCTCATATTCCTGCTTTAAG...TTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGAGGAAGTCAAATATTTaGCTCTCCAGCACACAAACC +
Preference number: 4 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTRKSNI*LSSTQT
Trigger: GGTTTGTGTGCTGGAGAGGCAAATATTTGACTTCCT...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS-3UTR GCA 90 bp GCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCTTGCTCTTCATGAAATaGAGGAGGCCACTGCGAAAA +
Preference number: 4 (lower is better)
Translates to: AISDFGYKVIMACFVCFCLLFMK*RRPLRK
Trigger: TTTTCGCAGTGGCCTCCTGCATTTCATGAAGAGCAA...GCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTTGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTWEKGA*FQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCA...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGTCAAGATGTATGGAGTaGAGAAGACAGAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTSRCME*RRQSSQ
Trigger: TTGAGAGCTCTGTCTTCTGCACTCCATACATCTTGA...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCTTAGGGCAAACAATCTaGCATTTCGGACTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVLGQTI*HFGLRV
Trigger: TACCCGAAGTCCGAAATGGCAGATTGTTTGCCCTAA...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCGGCACACAATGTAGGTaGGTTAAGGCAAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVGTQCR*VKASMY
Trigger: GTACATACTTGCCTTAACCCACCTACATTGTGTGCC...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCCTGCACTGGGATTCTTaGGCACACAATGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCLHWDS*AHNVGG
Trigger: CCCACCTACATTGTGTGCCCAAGAATCCCAGTGCAG...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCTGGGGCTGTCTGCACTaGGATTCTTGGGCACACAAT +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCWGCLH*DSWAHN
Trigger: ATTGTGTGCCCAAGAATCCCAGTGCAGACAGCCCCA...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CTGAGCTATTCAGTCTTGTTCCTTGACATGAAACACACAGGCTTGAACTCATTTTGGGGCTGTCTGCACTaGGATTCTTGGGCACACAAT +
Preference number: 4 (lower is better)
Translates to: LSYSVLFLDMKHTGLNSFWGCLH*DSWAHN
Trigger: ATTGTGTGCCCAAGAATCCCAGTGCAGACAGCCCCA...AAATGAGTTCAAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 72 bp CGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTaGCAATTACATTGCCTAAGTAGCCGTGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RVQGHHGMFRLF*QLHCLSSRGAV
Trigger: GACAGCACCACGGCTACTTAGGCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AAAGGGGCCTGCTTTCAGGAAATCCAAGATGGGCGTGTCCTGCATATTTGTCTGCATGGGCTGACATACTaGAGTCATCTGTATTATTTT +
Preference number: 4 (lower is better)
Translates to: KGACFQEIQDGRVLHICLHGLTY*SHLYYF
Trigger: AAAATAATACAGATGACTTCAGTATGTCAGCCCATG...CAGACAAATATGCAGGACACGCCCATCTTGGATTTCCTGAAAGCAGGCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR TCA 90 bp GTGGTGCTGTCAAGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGTTCAGTCTTGTTCCTTaGCATGAAACACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: VVLSRCMECRRQSSQTNVFSLVP*HETHRL
Trigger: AAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAA...CACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCTTGACAGCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGAAACATACAACCCACTaGGGAAATTCAAGCATGAGT +
Preference number: 4 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTKHTTH*GNSSMS
Trigger: ACTCATGCTTGAATTTCCTCAGTGGGTTGTATGTTT...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTTTCTTCACCGGATTTTaGGGAGGATACAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFFFTGF*GGYSCT
Trigger: TGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAA...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCAAGATGGGCGTGTCCTaGATATTTGTCTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVKMGVS*IFVCFS
Trigger: ACTGAAACAGACAAATATGCAGGACACGCCCATCTT...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGGAGTTAAGCCATTTCTaGTTTCTGCTTCCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTELSHF*FLLPVD
Trigger: ATCTACTGGAAGCAGAAAGCAGAAATGGCTTAACTC...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 72 bp CTTTCAGGAAATCCAAGATGGGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LSGNPRWACPAY*SVSVRKRRSSG
Trigger: TCCACTTGACCTCCTCTTTCTAACTGAAACAGACAAATATGCAGGACACGCCCATCTTGGATTTCCTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
3UTR CAA 72 bp GGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTaGTTTTTGCAATTACATTGCCTAAGTAGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: GLRVQGHHGMFR*FLQLHCLSSRG
Trigger: ACCACGGCTACTTAGGCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp TTACTAATTGTCGAAGAAAATCAGCACACTAAGTCCAGAGGATGGTTTAGTTTACTCCAGCAAACACCCTaGGACCGTGATGTAGCGATG +
Preference number: 4 (lower is better)
Translates to: LLIVEENQHTKSRGWFSLLQQTP*DRDVAM
Trigger: CATCGCTACATCACGGTCTCAGGGTGTTTGCTGGAG...TAAACTAAACCATCCTCTGGACTTAGTGTGCTGATTTTCTTCGACAATTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp CACAATAATACAGGAGGGTTGAAATACACTCTAACACACAACAGATCCCCCAAAGAAAGGTCCATGGGCTaGCATACTGAAGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: HNNTGGLKYTLTHNRSPKERSMG*HTEVIC
Trigger: ACAGATGACTTCAGTATGTCAGCCCATGGACCTTTC...TTTGGGGGATCTGTTGTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATACAACACATCTCCTTCTaGACTTTCCGAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIQHISF*TFRRPG
Trigger: CCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTG...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAAGCGTGCACCTGCCACTaGAATAACCCATGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKACTCH*NNPWFP
Trigger: CGGAAACCATGGGTTATTGCAGTGGCAGGTGCACGC...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCATTTGCCAGGATAGGTaGCCACTGATATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPICQDR*PLISKE
Trigger: TTCCTTGGATATCAGTGGGCACCTATCCTGGCAAAT...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCAAAGAGGAGGTCAAGTaGAATTGGTGTGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCKEEVK*NWCVRA
Trigger: AGCACGCACACACCAATTCCACTTGACCTCCTCTTT...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATCAGGAAATCCAAGATaGGCGTGTCCTGCATATTTG +
Preference number: 4 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITSGNPR*ACPAYL
Trigger: CAAATATGCAGGACACGCCCATCTTGGATTTCCTGA...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp AGATGTATGGAGTGCAGAAGACAGAGCTCTCAAACTAATGTGCCTTGGATGACTCACTTTGCTGACAGCTaGCACTTTTCTTATACAGAC +
Preference number: 4 (lower is better)
Translates to: RCMECRRQSSQTNVPWMTHFADS*HFSYTD
Trigger: GTCTGTATAAGAAAAGTGCCAGCTGTCAGCAAAGTG...AGTCATCCAAGGCACATTAGTTTGAGAGCTCTGTCTTCTGCACTCCATACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp CACAATAATACAGGAGGGTTGAAATACACTCTAACACACAACAGATCCCCCAAATCTTTTGGGCCACCATaGAGGCTCTATGGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: HNNTGGLKYTLTHNRSPKSFGPP*RLYGKA
Trigger: TGCTTTACCATAGAGCCTCCATGGTGGCCCAAAAGA...TTTGGGGGATCTGTTGTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAAAACACCCTGAGACCGTaGTGTAGCGATGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKNTLRP*CSDGLL
Trigger: CAGAAGACCATCGCTACATCACGGTCTCAGGGTGTT...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTAACACCCTGAGACCGTaGTGTAGCGATGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCNTLRP*CSDGLL
Trigger: CAGAAGACCATCGCTACATCACGGTCTCAGGGTGTT...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATCTGGAGGGAACTATaGGCCACTTCTATGTACTGG +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWIWREL*ATSMYW
Trigger: CCAGTACATAGAAGTGGCTCATAGTTCCCTCCAGAT...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTCATAACAGGCGTAGATaGAACCTGCCAGTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCHNRRR*NLPVRG
Trigger: TCCTCGCACTGGCAGGTTTCATCTACGCCTGTTATG...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TTACTAATTGTCGAAGAAAATCAGCACACTAAGTCCAGAGGATGGTTTAGTTTAGCTGCCAACACTTACTaGGAGGACAATCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLIVEENQHTKSRGWFSLAANTY*EDNLEG
Trigger: TCCCTCCAGATTGTCCTCGCAGTAAGTGTTGGCAGC...TAAACTAAACCATCCTCTGGACTTAGTGTGCTGATTTTCTTCGACAATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCAGGAAGTCAAATATTTaGCTCTCCAGCACACAAACG +
Preference number: 4 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPRKSNI*LSSTQT
Trigger: CGTTTGTGTGCTGGAGAGGCAAATATTTGACTTCCT...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545433.2
CDS-3UTR CCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAACACTGCAATAACCCATaGTTTCCGAGACCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKHCNNP*FPRPLP
Trigger: TGGCAGGGGTCTCGGAAACCATGGGTTATTGCAGTG...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CCA 90 bp TTACTAATTGTCGAAGAAAATCAGCACACTAAGTCCAGAGGATGGTTTAGTTTAACTAGAAGGAGCGGTTaGCTGCCAACACTTACTGCG +
Preference number: 4 (lower is better)
Translates to: LLIVEENQHTKSRGWFSLTRRSG*LPTLTA
Trigger: CGCAGTAAGTGTTGGCAGCCAACCGCTCCTTCTAGT...TAAACTAAACCATCCTCTGGACTTAGTGTGCTGATTTTCTTCGACAATTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CCA 90 bp CTGAGCTATTCAGTCTTGTTCCTTGACATGAAACACACAGGCTTGAACTCATTTCAAACTAATGTGCCTTaGATGACTTCCCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: LSYSVLFLDMKHTGLNSFQTNVP*MTSQLT
Trigger: TGTGAGCTGGGAAGTCATCCAAGGCACATTAGTTTG...AAATGAGTTCAAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
3UTR CAA 72 bp ACAGCACAGTTTTTCTGCCACAATAATACAGGAGGGTaGAAATACACTCTAACACACAACAGATCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TAQFFCHNNTGG*KYTLTHNRSPK
Trigger: TTTGGGGGATCTGTTGTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATTGTGGCAGAAAAACTGTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CTGAGCTATTCAGTCTTGTTCCTTGACATGAAACACACAGGCTTGAACTCATTTTTCAGTCTTGTTCCTTaGCATGAAACACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LSYSVLFLDMKHTGLNSFFSLVP*HETHRL
Trigger: AAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAA...AAATGAGTTCAAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCAATCGCATCACAGCATaGATGTACAGTGAAACCTCA +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCNRITA*MYSETS
Trigger: TGAGGTTTCACTGTACATTCATGCTGTGATGCGATT...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTGCCAGGATAGGTaGCCACTGATATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWICQDR*PLISKE
Trigger: TTCCTTGGATATCAGTGGGCACCTATCCTGGCAAAT...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCGAGTTAAGCCATTTCTaGTTTCTGCTTCCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPELSHF*FLLPVD
Trigger: ATCTACTGGAAGCAGAAAGCAGAAATGGCTTAACTC...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp CTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATTGCACAGCACAGTTTTTCTaGCACAATAATACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRVQGHHGMFRLFLQLHCTAQFF*HNNTGG
Trigger: CCCTCCTGTATTATTGTGGCAGAAAAACTGTGCTGT...GCAATGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATAGCCACTTCTATGTACTaGTACTCCAGCAAACACCCT +
Preference number: 4 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIATSMY*YSSKHP
Trigger: AGGGTGTTTGCTGGAGTACCAGTACATAGAAGTGGC...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACACTTAAAGCAGGAATATaGGGGTTTATTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITLKAGI*GFIFCT
Trigger: GGTACAGAAAATAAACCCTCATATTCCTGCTTTAAG...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTATCCACCAAGATCGGTaGATTGATATATTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFIHQDR*IDILKV
Trigger: GACTTTTAATATATCAATGCACCGATCTTGGTGGAT...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGCAGATTCCATTTGTGTaGACTGAGTTCGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWQIPFV*TEFAQK
Trigger: TTTCTGTGCGAACTCAGTGCACACAAATGGAATCTG...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTTGGGAGAAAGGGGCCTaGTTTCAGGAAATCCAAGAT +
Preference number: 4 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCWEKGA*FQEIQD
Trigger: ATCTTGGATTTCCTGAAAGCAGGCCCCTTTCTCCCA...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAAGCCACTTCTATGTACTaGTACTCCAGCAAACACCCT +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKATSMY*YSSKHP
Trigger: AGGGTGTTTGCTGGAGTACCAGTACATAGAAGTGGC...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAAGTGATGGATGGTGCCTaGGAGAAATCTAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKVMDGA*EKSRKE
Trigger: TTCCTTCCTAGATTTCTCCCAGGCACCATCCATCAC...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp CTGAGCTATTCAGTCTTGTTCCTTGACATGAAACACACAGGCTTGAACTCATTTCCAAGATCGGTGCATTaGTATATTAAAAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LSYSVLFLDMKHTGLNSFPRSVH*YIKSQD
Trigger: ATCCTGACTTTTAATATATCAATGCACCGATCTTGG...AAATGAGTTCAAGCCTGTGTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR TCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGTCCATTTGTGTGCACTaGGTTCGCACAGAAATAAAA +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWSICVH*VRTEIK
Trigger: TTTTATTTCTGTGCGAACTCAGTGCACACAAATGGA...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGAATATGTACAAAATTTaGCAGGATAGGTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWNMYKI*QDRCPL
Trigger: CAGTGGGCACCTATCCTGGCAAATTTTGTACATATT...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTAGTCAAAGCCACCTATaGAATCAAAGCTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCSQSHL*NQSCPL
Trigger: AAGAGGACAGCTTTGATTTCATAGGTGGCTTTGACT...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp TTACTAATTGTCGAAGAAAATCAGCACACTAAGTCCAGAGGATGGTTTAGTTTAAGGAAGTCAAATATTTaGCTCTCCAGCACACAAACC +
Preference number: 4 (lower is better)
Translates to: LLIVEENQHTKSRGWFSLRKSNI*LSSTQT
Trigger: GGTTTGTGTGCTGGAGAGGCAAATATTTGACTTCCT...TAAACTAAACCATCCTCTGGACTTAGTGTGCTGATTTTCTTCGACAATTAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATAAATATGTACAAAATTTaGCAGGATAGGTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPINMYKI*QDRCPL
Trigger: CAGTGGGCACCTATCCTGGCAAATTTTGTACATATT...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGCAGTACTATGAAAAATaGGGGCATGAATGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWQYYEK*GHECLR
Trigger: TCTAAGACATTCATGCCCCCATTTTTCATAGTACTG...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATACCAAGATCGGTGCATTaGTATATTAAAAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPIPRSVH*YIKSQD
Trigger: ATCCTGACTTTTAATATATCAATGCACCGATCTTGG...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR GCA 90 bp GTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATTTCCTATGTAAAAAGCACACAAACCAGTTaGATGCCACAGATAAAGATA +
Preference number: 4 (lower is better)
Translates to: VYQKSRNHILTDWISYVKSTQTS*MPQIKI
Trigger: TATCTTTATCTGTGGCATGCAACTGGTTTGTGTGCT...TTTTACATAGGAAATCCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR GCA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGATCCACCAAGATCGGTaGATTGATATATTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: RILGKVYQKSRNHILTDWIHQDR*IDILKV
Trigger: GACTTTTAATATATCAATGCACCGATCTTGGTGGAT...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp TTACTAATTGTCGAAGAAAATCAGCACACTAAGTCCAGAGGATGGTTTAGTTTACCAAGATCGGTGCATTaGTATATTAAAAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLIVEENQHTKSRGWFSLPRSVH*YIKSQD
Trigger: ATCCTGACTTTTAATATATCAATGCACCGATCTTGG...TAAACTAAACCATCCTCTGGACTTAGTGTGCTGATTTTCTTCGACAATTAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR TCA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTCATGGGCTGACATACTaGAGTCATCTGTATTATTTT +
Preference number: 4 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCHGLTY*SHLYYF
Trigger: AAAATAATACAGATGACTTCAGTATGTCAGCCCATG...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS GCA 90 bp CCTTCACTCGCTCGGTGCACACGCCGCGCCGCGGGCAGTGCCGCCTaGGGAGGCGCGCTCGGGGCCCGCAGGGGCAGCAGCGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PSLARCTRRAAGSAA*GGALGARRGSSGSL
Trigger: CAGGCTGCCGCTGCTGCCCCTGCGGGCCCCGAGCGCGCCTCCGCAGGCGGCACTGCCCGCGGCGCGGCGTGTGCACCGAGCGAGTGAAGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS GCA 90 bp CGGCAGCTCCAGCCGCGCCCGCCACACATACCTTCACTCGCTCGGTaGACACGCCGCGCCGCGGGCAGTGCCGCCTGCGGAGGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: RQLQPRPPHIPSLAR*TRRAAGSAACGGAL
Trigger: GAGCGCGCCTCCGCAGGCGGCACTGCCCGCGGCGCGGCGTGTGCACCGAGCGAGTGAAGGTATGTGTGGCGGGCGCGGCTGGAGCTGCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS CCA 90 bp CTGCTGCTGCCAGCGTCCTGGGAAGTGACAGGCATTAGGACCTGCTaGCGCGGCGGCGGCGGCGGCGGCAGCTCCAGCCGCGCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: LLLPASWEVTGIRTC*RGGGGGGSSSRARH
Trigger: GTGGCGGGCGCGGCTGGAGCTGCCGCCGCCGCCGCCGCCGCGCCAGCAGGTCCTAATGCCTGTCACTTCCCAGGACGCTGGCAGCAGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS GCA 90 bp AAGCGTGCACCTGCCACTGCAATAACCCATGGTTTCCGAGACCCCTaGCACAGCCAGACTGTCCCACGTCGGCCACCGTCGAGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: KRAPATAITHGFRDP*HSQTVPRRPPSSPH
Trigger: GTGGGGGCTCGACGGTGGCCGACGTGGGACAGTCTGGCTGTGGCAGGGGTCTCGGAAACCATGGGTTATTGCAGTGGCAGGTGCACGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368416.5
ENST00000368417.6
ENST00000476571.1
CDS-3UTR CAA 90 bp CAGAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGTGTGTGTGTCAGTGTaGTATGTAGAGGCTTTGCAT +
Preference number: 5 (lower is better)
Translates to: QRPTRWAAEELAMAGNRWVCVSV*YVEALH
Trigger: ATGCAAAGCCTCTACATACAACACTGACACACACAC...CCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp GAGGCCAACCCGCTGGGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: EANPLGCRGVSNGRQPLGACPAY*SVSVRK
Trigger: CTTTCTAACTGAAACAGACAAATATGCAGGACACGC...GCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCCCAGCGGGTTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGACCTAAAGGAAGTGGCTaGGGGCTGTCTGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: RQPLGINTSPSELSEGLGPKGSG*GLSALG
Trigger: TCCCAGTGCAGACAGCCCCAAGCCACTTCCTTTAGG...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS TCA 90 bp GGAACTATGAGCCACTTCTATGTACTGGTACTCCAGCAAACACCCTaGGACCGTGATGTAGCGATGGTCTTCTGGGGCCCAGTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GTMSHFYVLVLQQTP*DRDVAMVFWGPVWG
Trigger: GCCCCAGACTGGGCCCCAGAAGACCATCGCTACATCACGGTCTCAGGGTGTTTGCTGGAGTACCAGTACATAGAAGTGGCTCATAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368416.5
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp CGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAAATGGCCGGCAACCGTaGGGCATCAACACATCTCCT +
Preference number: 5 (lower is better)
Translates to: RQPLGINTSPSELSEGLGNGRQP*GINTSP
Trigger: AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATT...TCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp GCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGTCTGCACTGGGATTCTaGGGCACACAATGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: AGNRWASTHLLLNFPKAWSALGF*GTQCRW
Trigger: CCACCTACATTGTGTGCCCAAGAATCCCAGTGCAGA...CCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp GGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTATTCTTCACCGGATTTaGAGGAGGATACAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GCRGVSNGRQPLGINTSPILHRI*RRIQLY
Trigger: GTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT...AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS GCA 90 bp CACAGAAATAAAACAACCCCAGAGGCACTAGAAGGAGCGGTTGGCTaGCAACACTTACTGCGAGGACAATCTGGAGGGAACTATGAGCCA +
Preference number: 5 (lower is better)
Translates to: HRNKTTPEALEGAVG*QHLLRGQSGGNYEP
Trigger: TGGCTCATAGTTCCCTCCAGATTGTCCTCGCAGTAAGTGTTGGCAGCCAACCGCTCCTTCTAGTGCCTCTGGGGTTGTTTTATTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CAA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTCCTAAAGGAAGTGGCTaGGGGCTGTCTGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFPKGSG*GLSALG
Trigger: TCCCAGTGCAGACAGCCCCAAGCCACTTCCTTTAGG...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp TTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCAAGGAAGTCAAATATTaGCCTCTCCAGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: LGINTSPSELSEGLGERGKEVKY*PLQHTN
Trigger: GTTTGTGTGCTGGAGAGGCAAATATTTGACTTCCTT...GCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp GGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTCATGGCATGTTTCGTTaGTTTTTGCAATTACATTGC +
Preference number: 5 (lower is better)
Translates to: GCRGVSNGRQPLGINTSPHGMFR*FLQLHC
Trigger: GCAATGTAATTGCAAAAACAAACGAAACATGCCATG...AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp GCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCTCTGCACTGGGATTCTaGGGCACACAATGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: AISDFGYKVIMACFVCFCSALGF*GTQCRW
Trigger: CCACCTACATTGTGTGCCCAAGAATCCCAGTGCAGA...GCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp GGCTGCAGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTATTGTTATTGTTACTaGTCTCTTTTGGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: GCRGVSNGRQPLGINTSPYCYCY*SLLGHH
Trigger: ATGGTGGCCCAAAAGAGACAAGTAACAATAACAATA...AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTATTCTTCACCGGATTTaGAGGAGGATACAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: GVSNGRQPLGINTSPSELILHRI*RRIQLY
Trigger: GTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS TCA 90 bp GGAATAGATGCAGGGCCAGCCTTGTCCCTTCCTTACTCTGTAGACTaGAATTCTGGATTTGCAGTTCTGGTGCTTTCTTCCACTCTCTGT +
Preference number: 5 (lower is better)
Translates to: GIDAGPALSLPYSVD*NSGFAVLVLSSTLC
Trigger: ACAGAGAGTGGAAGAAAGCACCAGAACTGCAAATCCAGAATTTCAGTCTACAGAGTAAGGAAGGGACAAGGCTGGCCCTGCATCTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476571.1
CDS-3UTR CAA 90 bp AGAGGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAAAAACTCAGTTGCTTCTaGCTCTTCATGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: RGVSNGRQPLGINTSPSEKLSCF*LFMKCR
Trigger: CCTGCATTTCATGAAGAGCAAGAAGCAACTGAGTTT...TTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp AACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAGGGGCCTGCTTTCAAAACTCAGTTGCTTCTaGCTCTTCATGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: NTSPSELSEGLGERGLLSKLSCF*LFMKCR
Trigger: CCTGCATTTCATGAAGAGCAAGAAGCAACTGAGTTT...TGAAAGCAGGCCCCTTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp GGAGTTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: GVSNGRQPLGINTSPSELACPAY*SVSVRK
Trigger: CTTTCTAACTGAAACAGACAAATATGCAGGACACGC...AAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGGTGTGTGTGTCAGTGTaGTATGTAGAGGCTTTGCAT +
Preference number: 5 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTVCVSV*YVEALH
Trigger: ATGCAAAGCCTCTACATACAACACTGACACACACAC...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368417.6
ENST00000545433.2
ENST00000640160.1
CDS-3UTR CAA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGTCCAAAGGCATCTTGTaGCCAACTACGTTAACAGCA +
Preference number: 5 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTSKGIL*PTTLTA
Trigger: TGCTGTTAACGTAGTTGGCAACAAGATGCCTTTGGA...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS CCA 90 bp TGCAGGGCCAGCCTTGTCCCTTCCTTACTCTGTAGACTGAAATTCTaGATTTGCAGTTCTGGTGCTTTCTTCCACTCTCTGTTTGATAAA +
Preference number: 5 (lower is better)
Translates to: CRASLVPSLLCRLKF*ICSSGAFFHSLFDK
Trigger: TTTATCAAACAGAGAGTGGAAGAAAGCACCAGAACTGCAAATCCAGAATTTCAGTCTACAGAGTAAGGAAGGGACAAGGCTGGCCCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476571.1
CDS-3UTR CAA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCTGTCTTCTGAGGCCCTaGATAGCCATAAGAGTCAAA +
Preference number: 5 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVCLLRP*IAIRVK
Trigger: TTTGACTCTTATGGCTATCAAGGGCCTCAGAAGACA...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp TTAGCAATGGCCGGCAACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGTATTGTTATTGTTACTaGTCTCTTTTGGGCCACCAT +
Preference number: 5 (lower is better)
Translates to: LAMAGNRWASTHLLLNFPYCYCY*SLLGHH
Trigger: ATGGTGGCCCAAAAGAGACAAGTAACAATAACAATA...CGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp GCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAAGGAAGTCAAATATTaGCCTCTCCAGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: AISDFGYKVIMACFVCFCKEVKY*PLQHTN
Trigger: GTTTGTGTGCTGGAGAGGCAAATATTTGACTTCCTT...GCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTGTGTGTGTCAGTGTaGTATGTAGAGGCTTTGCAT +
Preference number: 5 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFVCVSV*YVEALH
Trigger: ATGCAAAGCCTCTACATACAACACTGACACACACAC...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp AACTGTAGATGTTTTCCCAGATATAATCACACTACTGTGCTTACTGATCCCATAAATGGCCGGCAACCGTaGGGCATCAACACATCTCCT +
Preference number: 5 (lower is better)
Translates to: NCRCFPRYNHTTVLTDPINGRQP*GINTSP
Trigger: AGGAGATGTGTTGATGCCCAACGGTTGCCGGCCATT...TATGGGATCAGTAAGCACAGTAGTGTGATTATATCTGGGAAAACATCTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp AACCGTTGGGCATCAACACATCTCCTTCTGAACTTTCCGAAGGCCTGGGAGAAAAATAATACAGGAGGGTaGAAATACACTCTAACACAC +
Preference number: 5 (lower is better)
Translates to: NRWASTHLLLNFPKAWEKNNTGG*KYTLTH
Trigger: GTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATT...TTTCTCCCAGGCCTTCGGAAAGTTCAGAAGGAGATGTGTTGATGCCCAACGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp CCATGCAAACACAGTAATGGAACTGGTGTATGTAGATCCGAATGGGCTAAGGTCGTTTCCAAAGGCATCTaGTTGCCAACTACGTTAACA +
Preference number: 5 (lower is better)
Translates to: PCKHSNGTGVCRSEWAKVVSKGI*LPTTLT
Trigger: TGTTAACGTAGTTGGCAACAAGATGCCTTTGGAAAC...GACCTTAGCCCATTCGGATCTACATACACCAGTTCCATTACTGTGTTTGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGACCCACAGATTCCATTaGTGTGCACTGAGTTCGCAC +
Preference number: 5 (lower is better)
Translates to: RILGKVYQKSRNHILTDWTHRFH*CALSSH
Trigger: GTGCGAACTCAGTGCACACAAATGGAATCTGTGGGT...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CAA 90 bp TCTGTTTCAGTTAGAAAGAGGAGGTCAAGTGGAATTGGTGTGTGCGTGCTCACGCATGGCATGTTTCGTTaGTTTTTGCAATTACATTGC +
Preference number: 5 (lower is better)
Translates to: SVSVRKRRSSGIGVCVLTHGMFR*FLQLHC
Trigger: GCAATGTAATTGCAAAAACAAACGAAACATGCCATG...CGTGAGCACGCACACACCAATTCCACTTGACCTCCTCTTTCTAACTGAAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp AACAATCTGCCATTTCGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTCTGAGCTATTCAGTCTaGTTCCTTGACATGAAACAC +
Preference number: 5 (lower is better)
Translates to: NNLPFRTSGTRSSWHVSFLSYSV*FLDMKH
Trigger: GTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG...AAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCGAAATGGCAGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACATCCAAAGGCATCTTGTaGCCAACTACGTTAACAGCA +
Preference number: 5 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITSKGIL*PTTLTA
Trigger: TGCTGTTAACGTAGTTGGCAACAAGATGCCTTTGGA...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACAGCGTGTCCTGCATATTaGTCTGTTTCAGTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITACPAY*SVSVRK
Trigger: CTTTCTAACTGAAACAGACAAATATGCAGGACACGC...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp ATTCTTCACCGGATTTTGAGGAGGATACAGCTGTACAACTGTAGATGTTTTCCCGTTTCCAAAGGCATCTaGTTGCCAACTACGTTAACA +
Preference number: 5 (lower is better)
Translates to: ILHRILRRIQLYNCRCFPVSKGI*LPTTLT
Trigger: TGTTAACGTAGTTGGCAACAAGATGCCTTTGGAAAC...GGGAAAACATCTACAGTTGTACAGCTGTATCCTCCTCAAAATCCGGTGAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp AGAATCCTTGGAAAAGTCTACCAAAAGTCACGTAATCACATCTTGACTGATTGGAAGGAAGTCAAATATTaGCCTCTCCAGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: RILGKVYQKSRNHILTDWKEVKY*PLQHTN
Trigger: GTTTGTGTGCTGGAGAGGCAAATATTTGACTTCCTT...CCAATCAGTCAAGATGTGATTACGTGACTTTTGGTAGACTTTTCCAAGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS-3UTR CAA 90 bp CGGACTTCGGGTACAAGGTCATCATGGCATGTTTCGTTTGTTTTTGCAATTACAAATAATACAGGAGGGTaGAAATACACTCTAACACAC +
Preference number: 5 (lower is better)
Translates to: RTSGTRSSWHVSFVFAITNNTGG*KYTLTH
Trigger: GTGTGTTAGAGTGTATTTCAACCCTCCTGTATTATT...TGTAATTGCAAAAACAAACGAAACATGCCATGATGACCTTGTACCCGAAGTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTAAACTCAGTTGCTTCTaGCTCTTCATGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCKLSCF*LFMKCR
Trigger: CCTGCATTTCATGAAGAGCAAGAAGCAACTGAGTTT...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS-3UTR CAA 90 bp ACATTAAACATGCATGTCACTATAAAAGCGTCATATGAGGTTTCACTGACATGTCTGAGCTATTCAGTCTaGTTCCTTGACATGAAACAC +
Preference number: 5 (lower is better)
Translates to: TLNMHVTIKASYEVSLTCLSYSV*FLDMKH
Trigger: GTGTTTCATGTCAAGGAACAAGACTGAATAGCTCAG...ACATGTCAGTGAAACCTCATATGACGCTTTTATAGTGACATGCATGTTTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS GCA 72 bp CAGCCGCGCCCGCCACACATACCTTCACTCGCTCGGTaGACACGCCGCGCCGCGGGCAGTGCCGCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: QPRPPHIPSLAR*TRRAAGSAACG
Trigger: TCCGCAGGCGGCACTGCCCGCGGCGCGGCGTGTGCACCGAGCGAGTGAAGGTATGTGTGGCGGGCGCGGCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368417.6
CDS GCA 72 bp CCTGCCACTGCAATAACCCATGGTTTCCGAGACCCCTaGCACAGCCAGACTGTCCCACGTCGGCCACCGTCG +
Preference number: 6 (lower is better)
Translates to: PATAITHGFRDP*HSQTVPRRPPS
Trigger: CGACGGTGGCCGACGTGGGACAGTCTGGCTGTGGCAGGGGTCTCGGAAACCATGGGTTATTGCAGTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368416.5
ENST00000368417.6
ENST00000476571.1
CDS TCA 72 bp ATGGTCTTCTGGGGCCCAGTCTGGGGCAGGTGTCACTaGCGTCACCGTACATCCTGGTCCATTCTCCATCCA +
Preference number: 6 (lower is better)
Translates to: MVFWGPVWGRCH*RHRTSWSILHP
Trigger: TGGATGGAGAATGGACCAGGATGTACGGTGACGTCAGTGACACCTGCCCCAGACTGGGCCCCAGAAGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368416.5
ENST00000368417.6
ENST00000545433.2
CDS TCA 72 bp AGCCACTTCTATGTACTGGTACTCCAGCAAACACCCTaGGACCGTGATGTAGCGATGGTCTTCTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: SHFYVLVLQQTP*DRDVAMVFWGP
Trigger: TGGGCCCCAGAAGACCATCGCTACATCACGGTCTCAGGGTGTTTGCTGGAGTACCAGTACATAGAAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368416.5
ENST00000368417.6
ENST00000545433.2
CDS TCA 72 bp AAACCTGCCAGTGCGAGGACAATCTGGAGGGAACTATaGGCCACTTCTATGTACTGGTACTCCAGCAAACAC +
Preference number: 6 (lower is better)
Translates to: KPASARTIWREL*ATSMYWYSSKH
Trigger: GTGTTTGCTGGAGTACCAGTACATAGAAGTGGCTCATAGTTCCCTCCAGATTGTCCTCGCACTGGCAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS TCA 72 bp CCAACACTTACTGCGAGGACAATCTGGAGGGAACTATaGGCCACTTCTATGTACTGGTACTCCAGCAAACAC +
Preference number: 6 (lower is better)
Translates to: PTLTARTIWREL*ATSMYWYSSKH
Trigger: GTGTTTGCTGGAGTACCAGTACATAGAAGTGGCTCATAGTTCCCTCCAGATTGTCCTCGCAGTAAGTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS TCA 72 bp GGCCACACTTTACCCACAGATTCCATTTGTGTGCACTaGGTTCGCACAGAAATAAAACAACCCCAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: GHTLPTDSICVH*VRTEIKQPQRH
Trigger: GTGCCTCTGGGGTTGTTTTATTTCTGTGCGAACTCAGTGCACACAAATGGAATCTGTGGGTAAAGTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368416.5
CDS TCA 72 bp CTTCAGTTATACATTTCACAACATAACAGGCGTAGATaGAACCTGCCAGTGCGAGGACAATCTGGAGGGAAC +
Preference number: 6 (lower is better)
Translates to: LQLYISQHNRRR*NLPVRGQSGGN
Trigger: GTTCCCTCCAGATTGTCCTCGCACTGGCAGGTTTCATCTACGCCTGTTATGTTGTGAAATGTATAACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368417.6
ENST00000545433.2
CDS GCA 72 bp GTCCCTTCCTTACTCTGTAGACTGAAATTCTGGATTTaGAGTTCTGGTGCTTTCTTCCACTCTCTGTTTGAT +
Preference number: 6 (lower is better)
Translates to: VPSLLCRLKFWI*SSGAFFHSLFD
Trigger: ATCAAACAGAGAGTGGAAGAAAGCACCAGAACTGCAAATCCAGAATTTCAGTCTACAGAGTAAGGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476571.1
CDS CAA 72 bp AAAGCAAAAAGGCCACACTTTACCCACAGATTCCATTaGTGTGCACTGAGTTCGCACAGAAATAAAACAACC +
Preference number: 6 (lower is better)
Translates to: KAKRPHFTHRFH*CALSSHRNKTT
Trigger: GGTTGTTTTATTTCTGTGCGAACTCAGTGCACACAAATGGAATCTGTGGGTAAAGTGTGGCCTTTTTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368416.5