RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000158793

Ensembl transcript IDs: ENST00000368007.8, ENST00000368008.5, ENST00000368009.7, ENST00000392190.9, ENST00000461376.1, ENST00000473918.1, ENST00000477684.5, ENST00000478277.5, ENST00000479266.5, ENST00000479728.1, ENST00000485594.1, ENST00000486962.5, ENST00000491497.1, ENST00000492411.5, ENST00000496768.5, ENST00000496861.5

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGCATTGCGTACCTaGGCCCCCAGCATGGCGGGCCTAAAGCGGCGGGCAAGCCAGGTG +
Preference number: 1 (lower is better)
Translates to: GIAAAEQGFWKALRT*APSMAGLKRRASQV
Trigger: CACCTGGCTTGCCCGCCGCTTTAGGCCCGCCATGCTGGGGGCTCAGGTACGCAATGCTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR GCA 90 bp GCCAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCCACGACCTGCTGCCCTACGTCACCC +
Preference number: 1 (lower is better)
Translates to: ARAAVMKVTFARCCS*CASSLATTCCPTSP
Trigger: GGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR GCA 90 bp TGGAGCGCCAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCACTCGCCACGACCTGCTGCCCTACG +
Preference number: 1 (lower is better)
Translates to: WSARAAVMKVTFARC*SCCASSLATTCCPT
Trigger: CGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTGGCGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR CCA 90 bp ACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGC +
Preference number: 1 (lower is better)
Translates to: TSVDSSEMDVTSYWH*SARAAVMKVTFARC
Trigger: GCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 90 bp AAGCAGCCCATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTaGGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCAC +
Preference number: 1 (lower is better)
Translates to: KQPICVPSRESRFSK*GELCLDPASKSHEH
Trigger: GTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATGGGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR CCA 90 bp ATGACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTaGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACTTTCGCC +
Preference number: 1 (lower is better)
Translates to: MTTSVDSSEMDVTSY*HWSARAAVMKVTFA
Trigger: GGCGAAAGTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 90 bp GGCTGTACAGCCTGCACCGCATGTTTGACATCGTGGGCACTCATCTaGCACACAGAGATGTGCGCGTGCTTTCTTTCCTCTTTGTTGATG +
Preference number: 1 (lower is better)
Translates to: GCTACTACLTSWALI*HTEMCACFLSSLLM
Trigger: CATCAACAAAGAGGAAAGAAAGCACGCGCACATCTCTGTGTGTCAGATGAGTGCCCACGATGTCAAACATGCGGTGCAGGCTGTACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 90 bp TTAGCAACTGGGAATATGGGAATGCATGAGACTAGTTCCTGCCCTTaGGTGTCTCATCGGTTCTTTCCCTGCCCTTTCAGTACGGTGGGG +
Preference number: 1 (lower is better)
Translates to: LATGNMGMHETSSCP*VSHRFFPCPFSTVG
Trigger: CCCCACCGTACTGAAAGGGCAGGGAAAGAACCGATGAGACACTCAAGGGCAGGAACTAGTCTCATGCATTCCCATATTCCCAGTTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 90 bp ACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATaGTTATTATATTTTTCAATGCCAGTGCTGCTCAGCCCTCAGCAG +
Preference number: 1 (lower is better)
Translates to: TPLLVPKGDVQTQTL*LLYFSMPVLLSPQQ
Trigger: CTGCTGAGGGCTGAGCAGCACTGGCATTGAAAAATATAATAATCATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR TCA 90 bp TATCATTTCTTGATGTGGTTGGATTGTAGGAAAAATGTGGAGGGATaGTTCTGGGCTGCAAAGGCCAAGGATGCTTGTATCTTTGAAATG +
Preference number: 1 (lower is better)
Translates to: YHFLMWLDCRKNVEG*FWAAKAKDACIFEM
Trigger: CATTTCAAAGATACAAGCATCCTTGGCCTTTGCAGCCCAGAATCATCCCTCCACATTTTTCCTACAATCCAACCACATCAAGAAATGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR TCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGTCGTGGGCACTCATCTaGCACACAGAGATGTGCGCG +
Preference number: 2 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGSWALI*HTEMCA
Trigger: CGCGCACATCTCTGTGTGTCAGATGAGTGCCCACGA...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCTCATAGTGGCAGGGTaGGGGTGGGAGGGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSLIVAG*GWEGQV
Trigger: GACCTGCCCCTCCCACCCCCACCCTGCCACTATGAG...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCA +
Preference number: 2 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGTFARC*SCCASS
Trigger: TGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGT...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCTCATAGTGGCAGGGTaGGGGTGGGAGGGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: FHQESQGSPSEGSCAWILLIVAG*GWEGQV
Trigger: GACCTGCCCCTCCCACCCCCACCCTGCCACTATGAG...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp CATCGGTTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGCCAGAAGAGCATGGTaGGCAGGAACATGGGCTGTA +
Preference number: 2 (lower is better)
Translates to: HRFFPCPFSTVGIAAAEQARRAW*AGTWAV
Trigger: TACAGCCCATGTTCCTGCTCACCATGCTCTTCTGGC...CTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAACCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR TCA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCCCTGCACCGCATGTTTaGCATCGTGGGCACTCATCT +
Preference number: 2 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFPAPHV*HRGHSS
Trigger: AGATGAGTGCCCACGATGTCAAACATGCGGTGCAGG...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR GCA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCGTAACTTTCGCCAGGTaGTGCAGCTGCTGCGCATCA +
Preference number: 2 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFVTFAR*CSCCAS
Trigger: TGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTAC...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGGAGGGGAGCTGTGCCTaGATCCTGCCTCCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVEGSCA*ILPPSH
Trigger: GTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTC...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR CAA 90 bp GATGACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATaGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACTTTCGC +
Preference number: 2 (lower is better)
Translates to: DDHERGLIRNGRDFL*ALERQGRCDESNFR
Trigger: GCGAAAGTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR GCA 90 bp TGTGGTTGGATTGTAGGAAAAATGTGGAGGGATGATTCTGGGCTGCAAAGGCCAAGGTGCTGCAGCTGCTaGGCATCATCACTCGCCACG +
Preference number: 2 (lower is better)
Translates to: CGWIVGKMWRDDSGLQRPRCCSC*ASSLAT
Trigger: CGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCT...TGGCCTTTGCAGCCCAGAATCATCCCTCCACATTTTTCCTACAATCCAACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CCA 90 bp TGTGGTTGGATTGTAGGAAAAATGTGGAGGGATGATTCTGGGCTGCAAAGGCCACGGGCAAGCCAGGTGTaGCCAGAAGAGCATGGTGAG +
Preference number: 2 (lower is better)
Translates to: CGWIVGKMWRDDSGLQRPRASQV*PEEHGE
Trigger: CTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCG...TGGCCTTTGCAGCCCAGAATCATCCCTCCACATTTTTCCTACAATCCAACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTGAGGGGAGCTGTGCCTaGATCCTGCCTCCAAGTCAC +
Preference number: 2 (lower is better)
Translates to: NEPGGLELELSPAGTIPTEGSCA*ILPPSH
Trigger: GTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTC...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTGCCTCCAAGTCACATaGGCACTAGCTCATAGTGGC +
Preference number: 2 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVCLQVT*ALAHSG
Trigger: GCCACTATGAGCTAGTGCTCATGTGACTTGGAGGCA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTATCAAGGTTCTCCAAGTaGGGGGAGCTGTGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: GGLELELSPAGTIPTPLLSRFSK*GELCLD
Trigger: ATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGA...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp ACTATACTGTGCCAGGCATTGTTAGCAACTGGGAATATGGGAATGCATGAGACTGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCC +
Preference number: 2 (lower is better)
Translates to: TILCQALLATGNMGMHETARCCS*CASSLA
Trigger: GGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGC...AGTCTCATGCATTCCCATATTCCCAGTTGCTAACAATGCCTGGCACAGTATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR TCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAATCAAGGTTCTCCAAGTaGGGGGAGCTGTGCCTGGAT +
Preference number: 2 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKSRFSK*GELCLD
Trigger: ATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGA...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTATCTGAAACTGCAGTCTaGCCTCAGGTGAAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: GGLELELSPAGTIPTPLLSETAV*PQVKLR
Trigger: CCTGAGCTTCACCTGAGGTCAGACTGCAGTTTCAGA...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATTTTCAATGCCAGTGCTaGTCAGCCCTCAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDFQCQC*SALSRT
Trigger: AGTTCTGCTGAGGGCTGAGCAGCACTGGCATTGAAA...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTACAGGTGAAGCTCAGGTaGAAGTTTCTTTCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: GGLELELSPAGTIPTPLLQVKLR*KFLSQA
Trigger: TGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTG...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATCTGAAACTGCAGTCTaGCCTCAGGTGAAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLSETAV*PQVKLR
Trigger: CCTGAGCTTCACCTGAGGTCAGACTGCAGTTTCAGA...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAATTTCAATGCCAGTGCTaGTCAGCCCTCAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKFQCQC*SALSRT
Trigger: AGTTCTGCTGAGGGCTGAGCAGCACTGGCATTGAAA...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAACAGGTGAAGCTCAGGTaGAAGTTTCTTTCCCAAGCA +
Preference number: 2 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKQVKLR*KFLSQA
Trigger: TGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTG...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTACAGTCTGACCTCAGGTaGAGCTCAGGTGAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLQSDLR*SSGESF
Trigger: GAAACTTTCACCTGAGCTTCACCTGAGGTCAGACTG...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGCAGTCTGACCTCAGGTaGAGCTCAGGTGAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMQSDLR*SSGESF
Trigger: GAAACTTTCACCTGAGCTTCACCTGAGGTCAGACTG...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACAGTCTGACCTCAGGTaGAGCTCAGGTGAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: MLNEPGGLELELSPAGTIQSDLR*SSGESF
Trigger: GAAACTTTCACCTGAGCTTCACCTGAGGTCAGACTG...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATTTCAATGCCAGTGCTaGTCAGCCCTCAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: MLNEPGGLELELSPAGTIFQCQC*SALSRT
Trigger: AGTTCTGCTGAGGGCTGAGCAGCACTGGCATTGAAA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATAAAATTCCACCTTTCTaGAACTGCAGTCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDKIPPF*NCSLTS
Trigger: TGAGGTCAGACTGCAGTTTCAGAAAGGTGGAATTTT...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAATTTTTCAATGCCAGTaGTGCTCAGCCCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLIFQCQ*CSALSR
Trigger: TCTGCTGAGGGCTGAGCAGCACTGGCATTGAAAAAT...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATAATTTTTCAATGCCAGTaGTGCTCAGCCCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: MLNEPGGLELELSPAGTIIFQCQ*CSALSR
Trigger: TCTGCTGAGGGCTGAGCAGCACTGGCATTGAAAAAT...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTAAAATTCCACCTTTCTaGAACTGCAGTCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: NEPGGLELELSPAGTIPTKIPPF*NCSLTS
Trigger: TGAGGTCAGACTGCAGTTTCAGAAAGGTGGAATTTT...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR CAA 90 bp TCCCTGTTTATAGATGACAGCACTGAGAATCTGGAGTTAAGTGACTaGCTTACGGTCACACAGCTACACAGCCTTTCAGTGATACAGTCA +
Preference number: 2 (lower is better)
Translates to: SLFIDDSTENLELSD*LTVTQLHSLSVIQS
Trigger: TGACTGTATCACTGAAAGGCTGTGTAGCTGTGTGACCGTAAGCAAGTCACTTAACTCCAGATTCTCAGTGCTGTCATCTATAAACAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR GCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAATATTATATTTTTCAATaGCAGTGCTGCTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKYYIFQ*QCCSAL
Trigger: GAGGGCTGAGCAGCACTGGCATTGAAAAATATAATA...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR CCA 90 bp AACTTTCTGAGCAGTTATCATTTCTTGATGTGGTTGGATTGTAGGAAAAATGTGACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTG +
Preference number: 2 (lower is better)
Translates to: NFLSSYHFLMWLDCRKNVTSYWH*SARAAV
Trigger: CACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGT...CACATTTTTCCTACAATCCAACCACATCAAGAAATGATAACTGCTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CCA 90 bp GATTTTCTCATTGGATTCTTAACAACTCTGAGGTGTATATTCATTCATCCCTGTAGCCTCCTGTGCAGCTaGGACTACAGGCGTGTACCA +
Preference number: 2 (lower is better)
Translates to: DFLIGFLTTLRCIFIHPCSLLCS*DYRRVP
Trigger: TGGTACACGCCTGTAGTCCCAGCTGCACAGGAGGCT...ACAGGGATGAATGAATATACACCTCAGAGTTGTTAAGAATCCAATGAGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR GCA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATATGGGCTGTACAGCCTaGACCGCATGTTTGACATCG +
Preference number: 2 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENMGCTA*TACLTS
Trigger: CGATGTCAAACATGCGGTGCAGGCTGTACAGCCCAT...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR GCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGTATTATATTTTTCAATaGCAGTGCTGCTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMYYIFQ*QCCSAL
Trigger: GAGGGCTGAGCAGCACTGGCATTGAAAAATATAATA...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR GCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATATTATATTTTTCAATaGCAGTGCTGCTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLYYIFQ*QCCSAL
Trigger: GAGGGCTGAGCAGCACTGGCATTGAAAAATATAATA...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR TCA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATTACACAGCCTTTCAGTaGTACAGTCAGAATTTAAAC +
Preference number: 2 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENYTAFQ*YSQNLN
Trigger: GTTTAAATTCTGACTGTATCACTGAAAGGCTGTGTA...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CAA 90 bp TACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGCGGGCAAGCCAGGTGTGGCCGGACGTGACTTCTTATaGGCACTGGAGCGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: YLSPQHGGPKAAGKPGVAGRDFL*ALERQG
Trigger: GCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC...GGCCACACCTGGCTTGCCCGCCGCTTTAGGCCCGCCATGCTGGGGGCTCAGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 72 bp AGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATaGGCACTAGCTCATAGTGGCAGGGTGGGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: RGAVPGSCLQVT*ALAHSGRVGVG
Trigger: TCCCACCCCCACCCTGCCACTATGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR GCA 72 bp GCCAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTaGTGCAGCTGCTGCGCATCATCACTCGCCACGACC +
Preference number: 3 (lower is better)
Translates to: ARAAVMKVTFAR*CSCCASSLATT
Trigger: GGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR GCA 72 bp AGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCACTCGCCACGACCTGC +
Preference number: 3 (lower is better)
Translates to: RAAVMKVTFARC*SCCASSLATTC
Trigger: GCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CAA 90 bp CCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGGCCTGCACCGCATGTTaGACATCGTGGGCACTCATC +
Preference number: 3 (lower is better)
Translates to: PALSVRWGLQLLSRDSGKACTAC*TSWALI
Trigger: GATGAGTGCCCACGATGTCAAACATGCGGTGCAGGC...CTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR GCA 72 bp GTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTaGGCATCATCACTCGCCACGACCTGCTGCCCTACG +
Preference number: 3 (lower is better)
Translates to: VMKVTFARCCSC*ASSLATTCCPT
Trigger: CGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR GCA 72 bp GCTGTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCCACGACCTGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: AVMKVTFARCCS*CASSLATTCCP
Trigger: AGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR-3UTR CAA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGTCTTTGTTGATGTCATaGATGACCACGAGCGTGGAC +
Preference number: 3 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGSLLMS*MTTSVD
Trigger: GTCCACGCTCGTGGTCATCAATGACATCAACAAAGA...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR CCA 72 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTaGATCCTGCCTCCAAGTCACATGAGCACTAGCTCA +
Preference number: 3 (lower is better)
Translates to: ESQGSPSEGSCA*ILPPSHMSTSS
Trigger: TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR TCA 72 bp GCCTGCACCGCATGTTTGACATCGTGGGCACTCATCTaGCACACAGAGATGTGCGCGTGCTTTCTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: ACTACLTSWALI*HTEMCACFLSS
Trigger: AGAGGAAAGAAAGCACGCGCACATCTCTGTGTGTCAGATGAGTGCCCACGATGTCAAACATGCGGTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR CCA 72 bp AGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTaGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTA +
Preference number: 3 (lower is better)
Translates to: SVDSSEMDVTSY*HWSARAAVMKV
Trigger: TACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR CCA 72 bp GACTCATCCGAAATGGACGTGACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTGATGAAAGTAACTTTC +
Preference number: 3 (lower is better)
Translates to: DSSEMDVTSYWH*SARAAVMKVTF
Trigger: GAAAGTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 72 bp GGGAATATGGGAATGCATGAGACTAGTTCCTGCCCTTaGGTGTCTCATCGGTTCTTTCCCTGCCCTTTCAGT +
Preference number: 3 (lower is better)
Translates to: GNMGMHETSSCP*VSHRFFPCPFS
Trigger: ACTGAAAGGGCAGGGAAAGAACCGATGAGACACTCAAGGGCAGGAACTAGTCTCATGCATTCCCATATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR TCA 72 bp AATTCCACCTTTCTGAAACTGCAGTCTGACCTCAGGTaGAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCC +
Preference number: 3 (lower is better)
Translates to: NSTFLKLQSDLR*SSGESFFPKQP
Trigger: GGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAGACTGCAGTTTCAGAAAGGTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR-3UTR CAA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATTGCTTTCTTTCCTCTTaGTTGATGTCATTGATGACC +
Preference number: 3 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENCFLSS*LMSLMT
Trigger: GGTCATCAATGACATCAACAAAGAGGAAAGAAAGCA...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGAAAGCATTGCGTACCTaGGCCCCCAGCATGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGKALRT*APSMAG
Trigger: GCCCGCCATGCTGGGGGCTCAGGTACGCAATGCTTT...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp TACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGCGGGCAAGCCAGGTGTGGCCATGGGCTGTACAGCCTaGACCGCATGTTTGACATCG +
Preference number: 4 (lower is better)
Translates to: YLSPQHGGPKAAGKPGVAMGCTA*TACLTS
Trigger: CGATGTCAAACATGCGGTGCAGGCTGTACAGCCCAT...GGCCACACCTGGCTTGCCCGCCGCTTTAGGCCCGCCATGCTGGGGGCTCAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTGGCAAGGCAGAGGCCTaGCCCCTCAGAGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSGKAEA*PLRAAG
Trigger: GCCCGCTGCTCTGAGGGGCCAGGCCTCTGCCTTGCC...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGCTCGCCACGACCTGCTaGCCTACGTCACCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGLATTC*PTSPSR
Trigger: TCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAG...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGGAGACGGGCTCCCAGTaGGCTGGGCCTGTAATGGAT +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGETGSQ*AGPVMD
Trigger: ATCCATTACAGGCCCAGCCCACTGGGAGCCCGTCTC...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp TACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGCGGGCAAGCCAGGTGTGGCCCATCCGAAATGGACGTaGCTTCTTATTGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: YLSPQHGGPKAAGKPGVAHPKWT*LLIGTG
Trigger: TCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATG...GGCCACACCTGGCTTGCCCGCCGCTTTAGGCCCGCCATGCTGGGGGCTCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGCCATGGCTCTGGGCCTaGGCTGAGCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGPWLWA*AEHKVL
Trigger: CAGTACTTTGTGCTCAGCCCAGGCCCAGAGCCATGG...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTGCGGGCAAGCCAGGTGTaGCCAGAAGAGCATGGTGAG +
Preference number: 4 (lower is better)
Translates to: NFRQVLQLLRIITRHDLLRASQV*PEEHGE
Trigger: CTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCG...CAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGCAGGGTCCCGTGCAATaGAGTCAAATGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGQGPVQ*SQMPQA
Trigger: TGCCTGAGGCATTTGACTTCATTGCACGGGACCCTG...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp CAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCCACCTCAGCCTCCTGTaGAGCTGGGACTACAGGCGT +
Preference number: 4 (lower is better)
Translates to: QGRCDESNFRQVLQLLRIHLSLL*SWDYRR
Trigger: ACGCCTGTAGTCCCAGCTGCACAGGAGGCTGAGGTG...GATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCATCAGGCCTGCGGTGCTaGAACACAGGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSSGLRC*NTGRCR
Trigger: CCGACACCTGCCTGTGTTCCAGCACCGCAGGCCTGA...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGATCCGGAGGGCGGTCTaGAGCCAGAAGCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILIRRAV*SQKRRS
Trigger: GCTGCGGCGCTTCTGGCTCCAGACCGCCCTCCGGAT...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368009.7
CDS-3UTR TCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGATCTCTGCTCCAGCTTaGGCCAATGCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGISAPA*ANARES
Trigger: ACTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGAT...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTGGCCAGAAGAGCATGGTaGGCAGGAACATGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: NFRQVLQLLRIITRHDLLARRAW*AGTWAV
Trigger: TACAGCCCATGTTCCTGCTCACCATGCTCTTCTGGC...CAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACGCCAGGTGCTGCAGCTaGTGCGCATCATCACTCGCC +
Preference number: 4 (lower is better)
Translates to: GRDFLLALERQGRCDESNARCCS*CASSLA
Trigger: GGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGC...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCATTAAAGCACCGCAGGTaGGATTCACCGCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSLKHRR*DSPRPT
Trigger: CGTCGGCCGCGGTGAATCCCACCTGCGGTGCTTTAA...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR GCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCATAGAGGTCAGGCCTaGGGTGCTGGAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSHRGQA*GAGTQA
Trigger: TGCCTGTGTTCCAGCACCGCAGGCCTGACCTCTATG...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp ATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGTCACTCGCCACGACCTaGTGCCCTACGTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: MKVTFARCCSCCASSLATSLATT*CPTSPS
Trigger: TGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGA...CGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp CAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCCATAGGCCCCTGCCCTaGAATCTCTACGTCACACAG +
Preference number: 4 (lower is better)
Translates to: QGRCDESNFRQVLQLLRIHRPLP*NLYVTQ
Trigger: CTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATG...GATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCACCATGGCTCTGGGCCTaGGCTGAGCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSPWLWA*AEHKVL
Trigger: CAGTACTTTGTGCTCAGCCCAGGCCCAGAGCCATGG...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp CATCGGTTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGACTTCTTATTGGCACTaGAGCGCCAGGGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRFFPCPFSTVGIAAAEQTSYWH*SARAAV
Trigger: CACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGT...CTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAACCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGGCCCTTTCAGTACGGTaGGGATTGCAGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PALSVRWGLQLLSRDSGKALSVR*GLQLLS
Trigger: GCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGC...CTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCACAGGGTCCCGTGCAATaGAGTCAAATGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSQGPVQ*SQMPQA
Trigger: TGCCTGAGGCATTTGACTTCATTGCACGGGACCCTG...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGTGGTGTGCTGACAGGTaGCTCAAGACTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILWCADR*LKTGPR
Trigger: CCTGGGCCCAGTCTTGAGTCACCTGTCAGCACACCA...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACTGCCTGCTGGTGTGCTaGCAGGTGACTCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GRDFLLALERQGRCDESNCLLVC*QVTQDW
Trigger: CCAGTCTTGAGTCACCTGTCAGCACACCAGCAGGCA...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTTCAAGGTTCTCCAAGTaGGGGGAGCTGTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSSRFSK*GELCLD
Trigger: ATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGA...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTAGGGACAGGAATCTGTaGGGAGGCCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSRDRNL*GGLVMK
Trigger: CTTCATCACCAGGCCTCCTCACAGATTCCTGTCCCT...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTGCGTCCACACTGTGCTaGTGCCACTACATAGCACTG +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSASTLC*CHYIAL
Trigger: CAGTGCTATGTAGTGGCAGCAGCACAGTGTGGACGC...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTTCTCCCACCCCTCCCTaGTGGGCAAGGGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPSPTPP*WARGKG
Trigger: TCCTTTGCCCCTTGCCCACCAGGGAGGGGTGGGAGA...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR CCA 90 bp CCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGTCTTGGCCACGCTCATaGAAACCACCCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PALSVRWGLQLLSRDSGKSWPRS*KPPKDS
Trigger: GCTGTCCTTGGGTGGTTTCCATGAGCGTGGCCAAGA...CTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTGTCTGCTCCCAGTCTTaGCCACGCTCATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSVCSQS*PRSWKP
Trigger: TGGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGAC...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCATAGGCCCCTGCCCTaGAATCTCTACGTCACACAG +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSHRPLP*NLYVTQ
Trigger: CTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATG...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAGGCAAGGCAGAGGCCTaGCCCCTCAGAGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLGKAEA*PLRAAG
Trigger: GCCCGCTGCTCTGAGGGGCCAGGCCTCTGCCTTGCC...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCTCATAGTGGCAGGGTaGGGGTGGGAGGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDLIVAG*GWEGQV
Trigger: GACCTGCCCCTCCCACCCCCACCCTGCCACTATGAG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGTGCCTGCTGGTGTGCTaGCAGGTGACTCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILCLLVC*QVTQDW
Trigger: CCAGTCTTGAGTCACCTGTCAGCACACCAGCAGGCA...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCAATCTCTGCTCCAGCTTaGGCCAATGCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSISAPA*ANARES
Trigger: ACTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGAT...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCAACTGTCGCAGATAGTTaGGGTCTATTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSTVADS*GLFGQG
Trigger: GCCTTGCCCGAATAGACCTCAACTATCTGCGACAGT...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGCGCCCCTGCACCGCATGTTTaGCATCGTGGGCACTCATCT +
Preference number: 4 (lower is better)
Translates to: TSVDSSEMDVTSYWHWSAPAPHV*HRGHSS
Trigger: AGATGAGTGCCCACGATGTCAAACATGCGGTGCAGG...GGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCAGCTGTGGCCATAACTTaGTCTCTTCTCATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSAVAIT*SLLMVA
Trigger: CGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGC...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTGCTGTGGCCATAACTTaGTCTCTTCTCATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSAVAIT*SLLMVA
Trigger: CGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGC...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTAGGGGTCTACCACCATaGTGTGGCCATAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSRGLPP*CGHNLL
Trigger: GAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCT...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGGTGGGTGACCCAGATTaGCATAGAGGTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILVGDPD*HRGQAC
Trigger: GCAGGCCTGACCTCTATGGCAATCTGGGTCACCCAC...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp ATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACTTTCGCCAGGTGCTaGAGCTGCTGCGCATCATCA +
Preference number: 4 (lower is better)
Translates to: MKVTFARCCSCCASSLATTFARC*SCCASS
Trigger: TGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGT...CGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp ATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGGTAACTTTCGCCAGGTaGTGCAGCTGCTGCGCATCA +
Preference number: 4 (lower is better)
Translates to: MKVTFARCCSCCASSLATVTFAR*CSCCAS
Trigger: TGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTAC...CGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp CATCGGTTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGATTCTGGAAAGCATTaGGTACCTGAGCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HRFFPCPFSTVGIAAAEQDSGKH*VPEPPA
Trigger: TGCTGGGGGCTCAGGTACGCAATGCTTTCCAGAATC...CTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAACCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp ACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGCGCCCATCGGTTCTTTCCCTaGCCTTTCAGTACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TSVDSSEMDVTSYWHWSAHRFFP*PFSTVG
Trigger: CCCCACCGTACTGAAAGGGCAGGGAAAGAACCGATG...GGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACGTCTGCTCCCAGTCTTaGCCACGCTCATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: GRDFLLALERQGRCDESNVCSQS*PRSWKP
Trigger: TGGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGAC...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTATCAGGCCTGCGGTGCTaGAACACAGGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLSGLRC*NTGRCR
Trigger: CCGACACCTGCCTGTGTTCCAGCACCGCAGGCCTGA...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGAGCCTCCTGTGCAGCTaGGACTACAGGCGTGTACCA +
Preference number: 4 (lower is better)
Translates to: DHERGLIRNGRDFLLALESLLCS*DYRRVP
Trigger: TGGTACACGCCTGTAGTCCCAGCTGCACAGGAGGCT...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGAAGCCCAGCCGCAGGTaGGATTCACCGCGGCCGACG +
Preference number: 4 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMKPSRR*DSPRPT
Trigger: CGTCGGCCGCGGTGAATCCCACCTGCGGCTGGGCTT...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392190.9
3UTR CAA 72 bp GAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATaGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: ERGLIRNGRDFL*ALERQGRCDES
Trigger: ACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCAGGGTCCCGTGCAATaGAGTCAAATGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILQGPVQ*SQMPQA
Trigger: TGCCTGAGGCATTTGACTTCATTGCACGGGACCCTG...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATTGGTGTGCTGACAGGTaGCTCAAGACTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDWCADR*LKTGPR
Trigger: CCTGGGCCCAGTCTTGAGTCACCTGTCAGCACACCA...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTGCCTGCTGGTGTGCTaGCAGGTGACTCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVCLLVC*QVTQDW
Trigger: CCAGTCTTGAGTCACCTGTCAGCACACCAGCAGGCA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCACAGTCTGACCTCAGGTaGAGCTCAGGTGAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSQSDLR*SSGESF
Trigger: GAAACTTTCACCTGAGCTTCACCTGAGGTCAGACTG...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGAAAAATGTGGAGGGATaGTTCTGGGCTGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PALSVRWGLQLLSRDSGKKNVEG*FWAAKA
Trigger: GGCCTTTGCAGCCCAGAATCATCCCTCCACATTTTT...CTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACCTCTGCAGGGTCCCGTaGAATGAAGTCAAATGCCTC +
Preference number: 4 (lower is better)
Translates to: GRDFLLALERQGRCDESNLCRVP*NEVKCL
Trigger: GAGGCATTTGACTTCATTGCACGGGACCCTGCAGAG...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCACTACTGCCCCTTTaGTGTTCAGCAGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILPLLPL*CSAARD
Trigger: GTCACGTGCTGCTGAACAGCAAAGGGGCAGTAGTGG...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGTCCAGCTTGAGCCAATaGCAGAGAGAGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PALSVRWGLQLLSRDSGKSSLSQ*QREFRE
Trigger: TTCCCTGAACTCTCTCTGGCATTGGCTCAAGCTGGA...CTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCATCCAGCTTGAGCCAATaGCAGAGAGAGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSSSLSQ*QREFRE
Trigger: TTCCCTGAACTCTCTCTGGCATTGGCTCAAGCTGGA...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGTCGATGTTACCTaGCACACAGCCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKGVDVT*HTATRG
Trigger: GCCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCC...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCAGTTCTGTTGCTTGTCTaGCGTCGATGTTACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSVLLLV*RRCYLA
Trigger: TGCCAGGTAACATCGACGCCAGACAAGCAACAGAAC...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTTCAGGCCTGCGGTGCTaGAACACAGGCAGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTSGLRC*NTGRCR
Trigger: CCGACACCTGCCTGTGTTCCAGCACCGCAGGCCTGA...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGCAGGGTCCCGTGCAATaGAGTCAAATGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVQGPVQ*SQMPQA
Trigger: TGCCTGAGGCATTTGACTTCATTGCACGGGACCCTG...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp TGTGGTTGGATTGTAGGAAAAATGTGGAGGGATGATTCTGGGCTGCAAAGGCCATGGTGTGCTGACAGGTaGCTCAAGACTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CGWIVGKMWRDDSGLQRPWCADR*LKTGPR
Trigger: CCTGGGCCCAGTCTTGAGTCACCTGTCAGCACACCA...TGGCCTTTGCAGCCCAGAATCATCCCTCCACATTTTTCCTACAATCCAACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTCAAGGTTCTCCAAGTaGGGGGAGCTGTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVSRFSK*GELCLD
Trigger: ATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTTCAAGGTTCTCCAAGTaGGGGGAGCTGTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPSRFSK*GELCLD
Trigger: ATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGA...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACCAAAGTACTGAGAGTTaGGGTATCCGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRDFLLALERQGRCDESNQSTES*GIRSPG
Trigger: TCCTGGACTCCGGATACCTCAACTCTCAGTACTTTG...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp ATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGCTGAGCACAAAGTACTaGGAGTTGAGGTATCCGGAG +
Preference number: 4 (lower is better)
Translates to: MKVTFARCCSCCASSLATLSTKY*ELRYPE
Trigger: CTCCGGATACCTCAACTCTCAGTACTTTGTGCTCAG...CGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp AAGCGGCGGGCAAGCCAGGTGTGGCCAGAAGAGCATGGTGAGCAGGAACATGGGGTTTTAAAGTTCTGTTaGTTGTCTGGCGTCGATGTT +
Preference number: 4 (lower is better)
Translates to: KRRASQVWPEEHGEQEHGVLKFC*LSGVDV
Trigger: AACATCGACGCCAGACAAGCAACAGAACTTTAAAAC...CCCATGTTCCTGCTCACCATGCTCTTCTGGCCACACCTGGCTTGCCCGCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGTCACACATAGGCCCCTaGCCTGGAATCTCTACGTCA +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILSHIGP*PGISTS
Trigger: TGACGTAGAGATTCCAGGGCAGGGGCCTATGTGTGA...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGGTGGCGTCCACACTGTaGTGCTGCCACTACATAGCA +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVVASTL*CCHYIA
Trigger: TGCTATGTAGTGGCAGCAGCACAGTGTGGACGCCAC...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCATAGAGGTCAGGCCTaGGGTGCTGGAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDHRGQA*GAGTQA
Trigger: TGCCTGTGTTCCAGCACCGCAGGCCTGACCTCTATG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGAGGATTATGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DHERGLIRNGRDFLLALERIMAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCATAATCCT...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp CTTTCTTTCCTCTTTGTTGATGTCATTGATGACCACGAGCGTGGACTCATCCGAGGCGTCGATGTTACCTaGCACACAGCCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSFLFVDVIDDHERGLIRGVDVT*HTATRG
Trigger: GCCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCC...TCGGATGAGTCCACGCTCGTGGTCATCAATGACATCAACAAAGAGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCGTTCTGTTGCTTGTCTaGCGTCGATGTTACCTGGCA +
Preference number: 4 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFVLLLV*RRCYLA
Trigger: TGCCAGGTAACATCGACGCCAGACAAGCAACAGAAC...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTCTTGGCCACGCTCATaGAAACCACCCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVSWPRS*KPPKDS
Trigger: GCTGTCCTTGGGTGGTTTCCATGAGCGTGGCCAAGA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGTCTGCTCCCAGTCTTaGCCACGCTCATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPVCSQS*PRSWKP
Trigger: TGGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGAC...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGAGGGGAGCTGTGCCTaGATCCTGCCTCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKEGSCA*ILPPSH
Trigger: GTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTC...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGCTGATCTTGAACTCCTaGCCTCAAGCCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: DHERGLIRNGRDFLLALELILNS*PQAFLP
Trigger: TGGGAGGAAGGCTTGAGGCCAGGAGTTCAAGATCAG...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTGATTGTAGGAAAAATGTaGAGGGATGATTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NFRQVLQLLRIITRHDLLIVGKM*RDDSGL
Trigger: CAGCCCAGAATCATCCCTCCACATTTTTCCTACAAT...CAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGAAGCCTCTTTCCTCTaGCAAACGTTTCCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPEASFL*QTFPQS
Trigger: GGACTGCGGAAACGTTTGTCAGAGGAAAGAGGCTTC...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR TCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATGGTGTGCTGACAGGTaGCTCAAGACTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIWCADR*LKTGPR
Trigger: CCTGGGCCCAGTCTTGAGTCACCTGTCAGCACACCA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGACTGTCGCAGATAGTTaGGGTCTATTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVTVADS*GLFGQG
Trigger: GCCTTGCCCGAATAGACCTCAACTATCTGCGACAGT...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTCTGAAACTGCAGTCTaGCCTCAGGTGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVSETAV*PQVKLR
Trigger: CCTGAGCTTCACCTGAGGTCAGACTGCAGTTTCAGA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGGAGGCATGTTGAATaGGCCAGGAGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPGRHVE*ARRSRT
Trigger: AGTTCTAGACCTCCTGGCTCATTCAACATGCCTCCC...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATAGGGACAGGAATCTGTaGGGAGGCCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDRDRNL*GGLVMK
Trigger: CTTCATCACCAGGCCTCCTCACAGATTCCTGTCCCT...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGGAAAGGAATCTGGAGTTAAGTaGCTTGCTTACGGTCACACA +
Preference number: 4 (lower is better)
Translates to: PALSVRWGLQLLSRDSGKESGVK*LAYGHT
Trigger: TGTGTGACCGTAAGCAAGTCACTTAACTCCAGATTC...CTTTCCAGAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTGCAATGAAGTCAAATaGCTCAGGCAGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFCNEVK*LRQESQ
Trigger: CTGGCTTTCCTGCCTGAGGCATTTGACTTCATTGCA...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCCACTACTGCCCCTTTaGTGTTCAGCAGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDPLLPL*CSAARD
Trigger: GTCACGTGCTGCTGAACAGCAAAGGGGCAGTAGTGG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTCCACACTGTGCTGCTaGCACTACATAGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVSTLCC*HYIALG
Trigger: ACCCAGTGCTATGTAGTGGCAGCAGCACAGTGTGGA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGCGTCCACACTGTGCTaGTGCCACTACATAGCACTG +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLASTLC*CHYIAL
Trigger: CAGTGCTATGTAGTGGCAGCAGCACAGTGTGGACGC...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTGGCGTCCACACTGTaGTGCTGCCACTACATAGCA +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDVASTL*CCHYIA
Trigger: TGCTATGTAGTGGCAGCAGCACAGTGTGGACGCCAC...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTAGGGGTCTACCACCATaGTGTGGCCATAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPRGLPP*CGHNLL
Trigger: GAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCT...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTGTGGGTGACCCAGATTaGCATAGAGGTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTVGDPD*HRGQAC
Trigger: GCAGGCCTGACCTCTATGGCAATCTGGGTCACCCAC...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGGTTCTGTTGCTTGTCTaGCGTCGATGTTACCTGGCA +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILVLLLV*RRCYLA
Trigger: TGCCAGGTAACATCGACGCCAGACAAGCAACAGAAC...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTATCTTGGCCACGCTCATaGAAACCACCCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLSWPRS*KPPKDS
Trigger: GCTGTCCTTGGGTGGTTTCCATGAGCGTGGCCAAGA...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTCTGCTCCCAGTCTTaGCCACGCTCATGGAAACCA +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLVCSQS*PRSWKP
Trigger: TGGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGAC...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTACATAGGCCCCTGCCCTaGAATCTCTACGTCACACAG +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLHRPLP*NLYVTQ
Trigger: CTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATG...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCATAGGCCCCTGCCCTaGAATCTCTACGTCACACAG +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDHRPLP*NLYVTQ
Trigger: CTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATAGCAACACCTCCCAGTaGGCTGGGCCTGTAATGGAT +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDSNTSQ*AGPVMD
Trigger: ATCCATTACAGGCCCAGCCCACTGGGAGGTGTTGCT...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGCTCTCTTCTCATGGTaGCGTCCACACTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLALFSW*RPHCAA
Trigger: AGCAGCACAGTGTGGACGCCACCATGAGAAGAGAGC...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGCTCTCTTCTCATGGTaGCGTCCACACTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDALFSW*RPHCAA
Trigger: AGCAGCACAGTGTGGACGCCACCATGAGAAGAGAGC...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAGAGGGGAGCTGTGCCTaGATCCTGCCTCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLEGSCA*ILPPSH
Trigger: GTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTC...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCAAGACTCTCTCCTTaGCTGTGCACTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTPRLSP*LCTCAA
Trigger: AGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGG...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR TCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATGCCTGCTGGTGTGCTaGCAGGTGACTCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTICLLVC*QVTQDW
Trigger: CCAGTCTTGAGTCACCTGTCAGCACACCAGCAGGCA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATTGCCTCCAAGTCACATaGGCACTAGCTCATAGTGGC +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDCLQVT*ALAHSG
Trigger: GCCACTATGAGCTAGTGCTCATGTGACTTGGAGGCA...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCAGGTGAAGCTCAGGTaGAAGTTTCTTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILQVKLR*KFLSQA
Trigger: TGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTG...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCAAAAATTCCACCTTTCTaGAACTGCAGTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSKIPPF*NCSLTS
Trigger: TGAGGTCAGACTGCAGTTTCAGAAAGGTGGAATTTT...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCTCTGCAGGGTCCCGTaGAATGAAGTCAAATGCCTC +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDLCRVP*NEVKCL
Trigger: GAGGCATTTGACTTCATTGCACGGGACCCTGCAGAG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTACTCTGCAGGGTCCCGTaGAATGAAGTCAAATGCCTC +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLLCRVP*NEVKCL
Trigger: GAGGCATTTGACTTCATTGCACGGGACCCTGCAGAG...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATTCCACACTGTGCTGCTaGCACTACATAGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDSTLCC*HYIALG
Trigger: ACCCAGTGCTATGTAGTGGCAGCAGCACAGTGTGGA...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTGTGGCGTCCACACTGTaGTGCTGCCACTACATAGCA +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTVASTL*CCHYIA
Trigger: TGCTATGTAGTGGCAGCAGCACAGTGTGGACGCCAC...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGCATAGAGGTCAGGCCTaGGGTGCTGGAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMHRGQA*GAGTQA
Trigger: TGCCTGTGTTCCAGCACCGCAGGCCTGACCTCTATG...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATAGTGGGTGACCCAGATTaGCATAGAGGTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIVGDPD*HRGQAC
Trigger: GCAGGCCTGACCTCTATGGCAATCTGGGTCACCCAC...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTTTTCAATGCCAGTGCTaGTCAGCCCTCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPFQCQC*SALSRT
Trigger: AGTTCTGCTGAGGGCTGAGCAGCACTGGCATTGAAA...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGGTTCTGTTGCTTGTCTaGCGTCGATGTTACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVVLLLV*RRCYLA
Trigger: TGCCAGGTAACATCGACGCCAGACAAGCAACAGAAC...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGAGAGTCCACATTCCCTaGCAAGCTGGGTGTATTCTT +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILRVHIP*QAGCIL
Trigger: AAGAATACACCCAGCTTGCCAGGGAATGTGGACTCT...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGCTCTCTTCTCATGGTaGCGTCCACACTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKALFSW*RPHCAA
Trigger: AGCAGCACAGTGTGGACGCCACCATGAGAAGAGAGC...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCATGGCTCTGGGCCTaGGCTGAGCACAAAGTACTG +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIPWLWA*AEHKVL
Trigger: CAGTACTTTGTGCTCAGCCCAGGCCCAGAGCCATGG...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGTACAGTGCAGGATTATaGCTCACTGCAGCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: DHERGLIRNGRDFLLALEYSAGL*LTAALN
Trigger: GTTCAAGGCTGCAGTGAGCCATAATCCTGCACTGTA...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTATCTCTGCTCCAGCTTaGGCCAATGCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTISAPA*ANARES
Trigger: ACTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGAT...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTACTGTCGCAGATAGTTaGGGTCTATTCGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTTVADS*GLFGQG
Trigger: GCCTTGCCCGAATAGACCTCAACTATCTGCGACAGT...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTGGGAGGCATGTTGAATaGGCCAGGAGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTGRHVE*ARRSRT
Trigger: AGTTCTAGACCTCCTGGCTCATTCAACATGCCTCCC...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTACAAAGTACTGAGAGTTaGGGTATCCGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLQSTES*GIRSPG
Trigger: TCCTGGACTCCGGATACCTCAACTCTCAGTACTTTG...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ACTATACTGTGCCAGGCATTGTTAGCAACTGGGAATATGGGAATGCATGAGACTTCGTGGGCACTCATCTaGCACACAGAGATGTGCGCG +
Preference number: 4 (lower is better)
Translates to: TILCQALLATGNMGMHETSWALI*HTEMCA
Trigger: CGCGCACATCTCTGTGTGTCAGATGAGTGCCCACGA...AGTCTCATGCATTCCCATATTCCCAGTTGCTAACAATGCCTGGCACAGTATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCTCTGCAGGGTCCCGTaGAATGAAGTCAAATGCCTC +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTLCRVP*NEVKCL
Trigger: GAGGCATTTGACTTCATTGCACGGGACCCTGCAGAG...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGATAGGTAAGTATCTCTaGTCCAGCTTGAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: DHERGLIRNGRDFLLALEIGKYL*SSLSQC
Trigger: GCATTGGCTCAAGCTGGAGCAGAGATACTTACCTAT...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATAGCGTCCACACTGTGCTaGTGCCACTACATAGCACTG +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIASTLC*CHYIAL
Trigger: CAGTGCTATGTAGTGGCAGCAGCACAGTGTGGACGC...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGCTGTGGCCATAACTTaGTCTCTTCTCATGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKAVAIT*SLLMVA
Trigger: CGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGC...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTAGGGGTCTACCACCATaGTGTGGCCATAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTRGLPP*CGHNLL
Trigger: GAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCT...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTATTTCAATGCCAGTGCTaGTCAGCCCTCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLFQCQC*SALSRT
Trigger: AGTTCTGCTGAGGGCTGAGCAGCACTGGCATTGAAA...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTATTTTTCAATGCCAGTaGTGCTCAGCCCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPIFQCQ*CSALSR
Trigger: TCTGCTGAGGGCTGAGCAGCACTGGCATTGAAAAAT...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATCTTGGCCACGCTCATaGAAACCACCCAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTISWPRS*KPPKDS
Trigger: GCTGTCCTTGGGTGGTTTCCATGAGCGTGGCCAAGA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGAGCAACACCTCCCAGTaGGCTGGGCCTGTAATGGAT +
Preference number: 4 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMSNTSQ*AGPVMD
Trigger: ATCCATTACAGGCCCAGCCCACTGGGAGGTGTTGCT...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp ACTATACTGTGCCAGGCATTGTTAGCAACTGGGAATATGGGAATGCATGAGACTGACGTGACTTCTTATTaGCACTGGAGCGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TILCQALLATGNMGMHETDVTSY*HWSARA
Trigger: GGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTC...AGTCTCATGCATTCCCATATTCCCAGTTGCTAACAATGCCTGGCACAGTATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
3UTR CAA 72 bp CACACAGAGATGTGCGCGTGCTTTCTTTCCTCTTTGTaGATGTCATTGATGACCACGAGCGTGGACTCATCC +
Preference number: 4 (lower is better)
Translates to: HTEMCACFLSSL*MSLMTTSVDSS
Trigger: GGATGAGTCCACGCTCGTGGTCATCAATGACATCAACAAAGAGGAAAGAAAGCACGCGCACATCTCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAATCTCTGCTCCAGCTTaGGCCAATGCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLISAPA*ANARES
Trigger: ACTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGAT...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATGCCTCCAAGTCACATaGGCACTAGCTCATAGTGGC +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTICLQVT*ALAHSG
Trigger: GCCACTATGAGCTAGTGCTCATGTGACTTGGAGGCA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCAGGTGAAGCTCAGGTaGAAGTTTCTTTCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDQVKLR*KFLSQA
Trigger: TGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCAGTCTGACCTCAGGTaGAGCTCAGGTGAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTQSDLR*SSGESF
Trigger: GAAACTTTCACCTGAGCTTCACCTGAGGTCAGACTG...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGTCTGAAACTGCAGTCTaGCCTCAGGTGAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMSETAV*PQVKLR
Trigger: CCTGAGCTTCACCTGAGGTCAGACTGCAGTTTCAGA...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATAGGGAGGCATGTTGAATaGGCCAGGAGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIGRHVE*ARRSRT
Trigger: AGTTCTAGACCTCCTGGCTCATTCAACATGCCTCCC...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCTGAGCACAAAGTACTaGGAGTTGAGGTATCCGGAG +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTLSTKY*ELRYPE
Trigger: CTCCGGATACCTCAACTCTCAGTACTTTGTGCTCAG...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATCACACATAGGCCCCTaGCCTGGAATCTCTACGTCA +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTISHIGP*PGISTS
Trigger: TGACGTAGAGATTCCAGGGCAGGGGCCTATGTGTGA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTTCCAGCTTGAGCCAATaGCAGAGAGAGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTSSLSQ*QREFRE
Trigger: TTCCCTGAACTCTCTCTGGCATTGGCTCAAGCTGGA...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTATAGGTAAGTATCTCTaGTCCAGCTTGAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPIGKYL*SSLSQC
Trigger: GCATTGGCTCAAGCTGGAGCAGAGATACTTACCTAT...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATCCACACTGTGCTGCTaGCACTACATAGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLSTLCC*HYIALG
Trigger: ACCCAGTGCTATGTAGTGGCAGCAGCACAGTGTGGA...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAATTTTTCAATGCCAGTaGTGCTCAGCCCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLIFQCQ*CSALSR
Trigger: TCTGCTGAGGGCTGAGCAGCACTGGCATTGAAAAAT...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTCATTCCCTGGCAAGCTaGGTGTATTCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPHSLAS*VYSSKS
Trigger: ACTTTTGGAAGAATACACCCAGCTTGCCAGGGAATG...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGGGAGTAGGTCCTACATaGAGATATAGCCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVGVGPT*RYSQNH
Trigger: ATGGTTTTGGCTATATCTTCATGTAGGACCTACTCC...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368007.8
ENST00000392190.9
CDS-3UTR TCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACTTGCGCAGCTTTACTaGCTCGAAGCATATTTCCCC +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTILAQLY*LEAYFP
Trigger: GGGGAAATATGCTTCGAGTCAGTAAAGCTGCGCAAG...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR TCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGAAAATTCCACCTTTCTaGAACTGCAGTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVKIPPF*NCSLTS
Trigger: TGAGGTCAGACTGCAGTTTCAGAAAGGTGGAATTTT...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTACAAAGTACTGAGAGTTaGGGTATCCGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLQSTES*GIRSPG
Trigger: TCCTGGACTCCGGATACCTCAACTCTCAGTACTTTG...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTACTGAGCACAAAGTACTaGGAGTTGAGGTATCCGGAG +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLLSTKY*ELRYPE
Trigger: CTCCGGATACCTCAACTCTCAGTACTTTGTGCTCAG...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCTACACAGCCTTTCAGTaGTACAGTCAGAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFYTAFQ*YSQNLN
Trigger: GTTTAAATTCTGACTGTATCACTGAAAGGCTGTGTA...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGGCAGTTATCATTTCTTaGTGTGGTTGGATTGTAGGA +
Preference number: 4 (lower is better)
Translates to: DHERGLIRNGRDFLLALEAVIIS*CGWIVG
Trigger: TCCTACAATCCAACCACATCAAGAAATGATAACTGC...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGGTTTTAAAGTTCTGTTaGTTGTCTGGCGTCGATGTT +
Preference number: 4 (lower is better)
Translates to: FHQESQGSPSEGSCAWILVLKFC*LSGVDV
Trigger: AACATCGACGCCAGACAAGCAACAGAACTTTAAAAC...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTTGCAATGAAGTCAAATaGCTCAGGCAGGAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTCNEVK*LRQESQ
Trigger: CTGGCTTTCCTGCCTGAGGCATTTGACTTCATTGCA...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATATCCAGCTTGAGCCAATaGCAGAGAGAGTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTISSLSQ*QREFRE
Trigger: TTCCCTGAACTCTCTCTGGCATTGGCTCAAGCTGGA...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAATAGGTAAGTATCTCTaGTCCAGCTTGAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLIGKYL*SSLSQC
Trigger: GCATTGGCTCAAGCTGGAGCAGAGATACTTACCTAT...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAATTTTTCAATGCCAGTaGTGCTCAGCCCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKIFQCQ*CSALSR
Trigger: TCTGCTGAGGGCTGAGCAGCACTGGCATTGAAAAAT...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAATCCGGGAACTATCCTTaGTTTTCCCAAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKSGNYP*FSQDSL
Trigger: GAGAGAGTCTTGGGAAAACCAAGGATAGTTCCCGGA...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR CCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCAAGTCTTAAGACAGTaGGTGACCCAGATTGCCATA +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDQVLRQ*VTQIAI
Trigger: TATGGCAATCTGGGTCACCCACTGTCTTAAGACTTG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAAAAATTCCACCTTTCTaGAACTGCAGTCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLKIPPF*NCSLTS
Trigger: TGAGGTCAGACTGCAGTTTCAGAAAGGTGGAATTTT...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAATAGGTAAGTATCTCTaGTCCAGCTTGAGCCAATGC +
Preference number: 4 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKIGKYL*SSLSQC
Trigger: GCATTGGCTCAAGCTGGAGCAGAGATACTTACCTAT...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CTGACCTCAGGTGAAGCTCAGGTGAAAGTTTCTTTCCCAAGCAGCCCATCTGTGTATTATATTTTTCAATaGCAGTGCTGCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LTSGEAQVKVSFPSSPSVYYIFQ*QCCSAL
Trigger: GAGGGCTGAGCAGCACTGGCATTGAAAAATATAATA...CACAGATGGGCTGCTTGGGAAAGAAACTTTCACCTGAGCTTCACCTGAGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp CTTTCTTTCCTCTTTGTTGATGTCATTGATGACCACGAGCGTGGACTCATCCGACTGGGAATATGGGAATaGATGAGACTAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSFLFVDVIDDHERGLIRLGIWE*MRLVPA
Trigger: GGCAGGAACTAGTCTCATGCATTCCCATATTCCCAG...TCGGATGAGTCCACGCTCGTGGTCATCAATGACATCAACAAAGAGGAAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCATTCCCTGGCAAGCTaGGTGTATTCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTHSLAS*VYSSKS
Trigger: ACTTTTGGAAGAATACACCCAGCTTGCCAGGGAATG...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATAAGAGTCCACATTCCCTaGCAAGCTGGGTGTATTCTT +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIRVHIP*QAGCIL
Trigger: AAGAATACACCCAGCTTGCCAGGGAATGTGGACTCT...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTTTAAAGTTCTGTTaGTTGTCTGGCGTCGATGTT +
Preference number: 4 (lower is better)
Translates to: GGLELELSPAGTIPTPLLVLKFC*LSGVDV
Trigger: AACATCGACGCCAGACAAGCAACAGAACTTTAAAAC...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATTATTATATTTTTCAATaGCAGTGCTGCTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDYYIFQ*QCCSAL
Trigger: GAGGGCTGAGCAGCACTGGCATTGAAAAATATAATA...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CCA 90 bp CTTTCTTTCCTCTTTGTTGATGTCATTGATGACCACGAGCGTGGACTCATCCGACATTCCCTGGCAAGCTaGGTGTATTCTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSFLFVDVIDDHERGLIRHSLAS*VYSSKS
Trigger: ACTTTTGGAAGAATACACCCAGCTTGCCAGGGAATG...TCGGATGAGTCCACGCTCGTGGTCATCAATGACATCAACAAAGAGGAAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp ACTATACTGTGCCAGGCATTGTTAGCAACTGGGAATATGGGAATGCATGAGACTAGAGTCCACATTCCCTaGCAAGCTGGGTGTATTCTT +
Preference number: 4 (lower is better)
Translates to: TILCQALLATGNMGMHETRVHIP*QAGCIL
Trigger: AAGAATACACCCAGCTTGCCAGGGAATGTGGACTCT...AGTCTCATGCATTCCCATATTCCCAGTTGCTAACAATGCCTGGCACAGTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CCA 90 bp ATGTTGAATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACAAGTCTTAAGACAGTaGGTGACCCAGATTGCCATA +
Preference number: 4 (lower is better)
Translates to: MLNEPGGLELELSPAGTIQVLRQ*VTQIAI
Trigger: TATGGCAATCTGGGTCACCCACTGTCTTAAGACTTG...TATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
3UTR CAA 72 bp ATAGATGACAGCACTGAGAATCTGGAGTTAAGTGACTaGCTTACGGTCACACAGCTACACAGCCTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IDDSTENLELSD*LTVTQLHSLSV
Trigger: CACTGAAAGGCTGTGTAGCTGTGTGACCGTAAGCAAGTCACTTAACTCCAGATTCTCAGTGCTGTCATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAGGAGTAGGTCCTACATaGAGATATAGCCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLGVGPT*RYSQNH
Trigger: ATGGTTTTGGCTATATCTTCATGTAGGACCTACTCC...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368007.8
ENST00000392190.9
CDS-3UTR TCA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: NEPGGLELELSPAGTIPTNGSKS*RIGKYL
Trigger: GAGATACTTACCTATCCTTCAGCTTTTGGATCCATT...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR GCA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATCCACTACTGCCCCTTTaGTGTTCAGCAGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENPLLPL*CSAARD
Trigger: GTCACGTGCTGCTGAACAGCAAAGGGGCAGTAGTGG...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMNGSKS*RIGKYL
Trigger: GAGATACTTACCTATCCTTCAGCTTTTGGATCCATT...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLNGSKS*RIGKYL
Trigger: GAGATACTTACCTATCCTTCAGCTTTTGGATCCATT...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR TCA 90 bp GATTTTCTCATTGGATTCTTAACAACTCTGAGGTGTATATTCATTCATCCCTGTAGGGACAGGAATCTGTaGGGAGGCCTGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: DFLIGFLTTLRCIFIHPCRDRNL*GGLVMK
Trigger: CTTCATCACCAGGCCTCCTCACAGATTCCTGTCCCT...ACAGGGATGAATGAATATACACCTCAGAGTTGTTAAGAATCCAATGAGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp AACTTTCTGAGCAGTTATCATTTCTTGATGTGGTTGGATTGTAGGAAAAATGTGTCACACATAGGCCCCTaGCCTGGAATCTCTACGTCA +
Preference number: 4 (lower is better)
Translates to: NFLSSYHFLMWLDCRKNVSHIGP*PGISTS
Trigger: TGACGTAGAGATTCCAGGGCAGGGGCCTATGTGTGA...CACATTTTTCCTACAATCCAACCACATCAAGAAATGATAACTGCTCAGAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATGGGACTACAGGCACATaGCACCATGCCTTGCTAATT +
Preference number: 4 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENGTTGT*HHALLI
Trigger: AATTAGCAAGGCATGGTGGCATGTGCCTGTAGTCCC...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR GCA 90 bp GATTTTCTCATTGGATTCTTAACAACTCTGAGGTGTATATTCATTCATCCCTGTACAGAGATGTGCGCGTaGTTTCTTTCCTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: DFLIGFLTTLRCIFIHPCTEMCA*FLSSLL
Trigger: CAACAAAGAGGAAAGAAAGCACGCGCACATCTCTGT...ACAGGGATGAATGAATATACACCTCAGAGTTGTTAAGAATCCAATGAGAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR TCA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENNGSKS*RIGKYL
Trigger: GAGATACTTACCTATCCTTCAGCTTTTGGATCCATT...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS CCA 90 bp CCCAAGCCGCGCCCCGCCCTCCACCCTCCCGCCGCCCGCTCCAGTTaGCCCGTCCCTCCCCGCCTCTCCCAGAGGCAGCATCTCTGTTAC +
Preference number: 5 (lower is better)
Translates to: PKPRPALHPPAARSS*PVPPRLSQRQHLCY
Trigger: GTAACAGAGATGCTGCCTCTGGGAGAGGCGGGGAGGGACGGGCCAACTGGAGCGGGCGGCGGGAGGGTGGAGGGCGGGGCGCGGCTTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368007.8
ENST00000496861.5
CDS GCA 90 bp GCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTaGCCTACGTCACCCTCAAGAGGAGACGGGCTCCCAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ARCCSCCASSLATTC*PTSPSRGDGLPVGW
Trigger: CCAGCCCACTGGGAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS GCA 90 bp TTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTaGTGCCCTACGTCACCCTCAAGAGGAGACGGGCTCCCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: FARCCSCCASSLATT*CPTSPSRGDGLPVG
Trigger: GCCCACTGGGAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS GCA 90 bp GCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTaGCCTACGTCACCCTCAAGAGGAGACGGGCTCGATGCATTCTGG +
Preference number: 5 (lower is better)
Translates to: ARCCSCCASSLATTC*PTSPSRGDGLDAFW
Trigger: CCAGAATGCATCGAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479728.1
CDS TCA 90 bp GGTGCTGGAACACAGGCAGGTGTCGGCGCAACTGTCGCAGATAGTTaGGGTCTATTCGGGCAAGGCAGAGGCCTGGCCCCTCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GAGTQAGVGATVADS*GLFGQGRGLAPQSS
Trigger: GCTGCTCTGAGGGGCCAGGCCTCTGCCTTGCCCGAATAGACCTCAACTATCTGCGACAGTTGCGCCGACACCTGCCTGTGTTCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS GCA 90 bp TTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTaGTGCCCTACGTCACCCTCAAGAGGAGACGGGCTCGATGCATTC +
Preference number: 5 (lower is better)
Translates to: FARCCSCCASSLATT*CPTSPSRGDGLDAF
Trigger: GAATGCATCGAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479728.1
CDS GCA 90 bp AGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTaGGCATCATCACTCGCCACGACCTGCTGCCCTACGTCACCCTCA +
Preference number: 5 (lower is better)
Translates to: RAAVMKVTFARCCSC*ASSLATTCCPTSPS
Trigger: TGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368008.5
ENST00000479728.1
CDS-3UTR CAA 90 bp AACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTGAGTCTGCTCCCAGTCTaGGCCACGCTCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: NFRQVLQLLRIITRHDLLSLLPV*ATLMET
Trigger: GGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGACT...CAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp TACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGCGGGCAAGCCAGGTGTGGCCTGTTTTAAAGTTCTGTaGCTTGTCTGGCGTCGATGT +
Preference number: 5 (lower is better)
Translates to: YLSPQHGGPKAAGKPGVACFKVL*LVWRRC
Trigger: ACATCGACGCCAGACAAGCAACAGAACTTTAAAACA...GGCCACACCTGGCTTGCCCGCCGCTTTAGGCCCGCCATGCTGGGGGCTCAGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS GCA 90 bp CACCACTGTTCCCCAGGGGTCTACCACCATGCTGTGGCCATAACTTaGTCTCTTCTCATGGTGGCGTCCACACTGTGCTGCTGCCACTAC +
Preference number: 5 (lower is better)
Translates to: HHCSPGVYHHAVAIT*SLLMVASTLCCCHY
Trigger: GTAGTGGCAGCAGCACAGTGTGGACGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCTGGGGAACAGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS GCA 90 bp AGTCTTAAGACAGTGGGTGACCCAGATTGCCATAGAGGTCAGGCCTaGGGTGCTGGAACACAGGCAGGTGTCGGCGCAACTGTCGCAGAT +
Preference number: 5 (lower is better)
Translates to: SLKTVGDPDCHRGQA*GAGTQAGVGATVAD
Trigger: ATCTGCGACAGTTGCGCCGACACCTGCCTGTGTTCCAGCACCGCAGGCCTGACCTCTATGGCAATCTGGGTCACCCACTGTCTTAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS-3UTR CAA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACGGACGTGACTTCTTATaGGCACTGGAGCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GRDFLLALERQGRCDESNGRDFL*ALERQG
Trigger: GCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp TACCTGAGCCCCCAGCATGGCGGGCCTAAAGCGGCGGGCAAGCCAGGTGTGGCCTGCTTTCTTTCCTCTTaGTTGATGTCATTGATGACC +
Preference number: 5 (lower is better)
Translates to: YLSPQHGGPKAAGKPGVACFLSS*LMSLMT
Trigger: GGTCATCAATGACATCAACAAAGAGGAAAGAAAGCA...GGCCACACCTGGCTTGCCCGCCGCTTTAGGCCCGCCATGCTGGGGGCTCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCCAGGCATGGTAGAGTaGCTTTCACACATAGGCCCC +
Preference number: 5 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSPGMVE*LSHIGP
Trigger: GGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGG...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp CAGGGCCGCTGTGATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCTATCTCTGCTCCAGCTaGAGCCAATGCCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: QGRCDESNFRQVLQLLRIYLCSS*SQCQRE
Trigger: CTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGATA...GATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCATCACAGCGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCGCCTGCACCGCATGTTaGACATCGTGGGCACTCATC +
Preference number: 5 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFACTAC*TSWALI
Trigger: GATGAGTGCCCACGATGTCAAACATGCGGTGCAGGC...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS TCA 90 bp GGAGACGGGCTCCCAGTGGGCTGGGCCTGTAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTCTGCTCCAGCTTGAGCCAATGCCAG +
Preference number: 5 (lower is better)
Translates to: GDGLPVGWACNGSKS*RIGKYLCSSLSQCQ
Trigger: CTGGCATTGGCTCAAGCTGGAGCAGAGATACTTACCTATCCTTCAGCTTTTGGATCCATTACAGGCCCAGCCCACTGGGAGCCCGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS GCA 90 bp CTGGCAGCCTCTCGAACCAGCTCAGCACATGTTTTAAAGTTCTGTTaGTTGTCTGGCGTCGATGTTACCTGGCACACAGCCACCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LAASRTSSAHVLKFC*LSGVDVTWHTATRG
Trigger: GCCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTGGTTCGAGAGGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CCA 90 bp GGGCCCAGGCATGGTAGAGTTGCTTTCACACATAGGCCCCTGCCCTaGAATCTCTACGTCACACAGATGTGTCTTCCTGTAAGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GPRHGRVAFTHRPLP*NLYVTQMCLPVSGH
Trigger: GTGGCCACTTACAGGAAGACACATCTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000479266.5
ENST00000485594.1
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS-3UTR CAA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGAGTCTGCTCCCAGTCTaGGCCACGCTCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: FHQESQGSPSEGSCAWILSLLPV*ATLMET
Trigger: GGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGACT...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp AGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTCACATGAGCACTAGCTCAACAGCTAGACCAATCTaGCCTGCTGGTGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: SEGSCAWILPPSHMSTSSTARPI*PAGVLT
Trigger: TGTCAGCACACCAGCAGGCAAGATTGGTCTAGCTGT...TGAGCTAGTGCTCATGTGACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTTATCTCTGCTCCAGCTaGAGCCAATGCCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSYLCSS*SQCQRE
Trigger: CTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGATA...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp GACCACGAGCGTGGACTCATCCGAAATGGACGTGACTTCTTATTGGCACTGGAGCCAGGCATGGTAGAGTaGCTTTCACACATAGGCCCC +
Preference number: 5 (lower is better)
Translates to: DHERGLIRNGRDFLLALEPGMVE*LSHIGP
Trigger: GGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGG...CTCCAGTGCCAATAAGAAGTCACGTCCATTTCGGATGAGTCCACGCTCGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp ATGAAAGTAACTTTCGCCAGGTGCTGCAGCTGCTGCGCATCATCACTCGCCACGACAGCTAGACCAATCTaGCCTGCTGGTGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: MKVTFARCCSCCASSLATTARPI*PAGVLT
Trigger: TGTCAGCACACCAGCAGGCAAGATTGGTCTAGCTGT...CGTGGCGAGTGATGATGCGCAGCAGCTGCAGCACCTGGCGAAAGTTACTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS TCA 90 bp CAGCAACACCTCCCAGTGGGCTGGGCCTGTAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTCTGCTCCAGCTTGAGCCAATGCCAG +
Preference number: 5 (lower is better)
Translates to: QQHLPVGWACNGSKS*RIGKYLCSSLSQCQ
Trigger: CTGGCATTGGCTCAAGCTGGAGCAGAGATACTTACCTATCCTTCAGCTTTTGGATCCATTACAGGCCCAGCCCACTGGGAGGTGTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
ENST00000496861.5
CDS CCA 90 bp CTCTCGAACCAGCTCAGCACATGTTTTAAAGTTCTGTTGCTTGTCTaGCGTCGATGTTACCTGGCACACAGCCACCAGGGGCAGTTCGCA +
Preference number: 5 (lower is better)
Translates to: LSNQLSTCFKVLLLV*RRCYLAHSHQGQFA
Trigger: TGCGAACTGCCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTGGTTCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS-3UTR CAA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATAGTCTGCTCCCAGTCTaGGCCACGCTCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDSLLPV*ATLMET
Trigger: GGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGACT...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAACCCAAGACTCTCTCCTaGACTGTGCACTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKPKTLS*TVHLRS
Trigger: GCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGG...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR CAA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTTTAAAGTTCTGTTGCTaGTCTGGCGTCGATGTTACC +
Preference number: 5 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSLKFCC*SGVDVT
Trigger: GGTAACATCGACGCCAGACAAGCAACAGAACTTTAA...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp GGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTACCAGGCATGGTAGAGTaGCTTTCACACATAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GGLELELSPAGTIPTPLLPGMVE*LSHIGP
Trigger: GGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGG...TAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp GAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATCCAGGCATGGTAGAGTaGCTTTCACACATAGGCCCC +
Preference number: 5 (lower is better)
Translates to: ELSPAGTIPTPLLVPKGDPGMVE*LSHIGP
Trigger: GGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGG...ATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTTATCTCTGCTCCAGCTaGAGCCAATGCCAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPYLCSS*SQCQRE
Trigger: CTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGATA...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTTGCTGTGGCCATAACTaGCTCTCTTCTCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPCCGHN*LSSHGG
Trigger: GCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCA...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp GGACGTGACTTCTTATTGGCACTGGAGCGCCAGGGCCGCTGTGATGAAAGTAACTCTTTGTTGATGTCATaGATGACCACGAGCGTGGAC +
Preference number: 5 (lower is better)
Translates to: GRDFLLALERQGRCDESNSLLMS*MTTSVD
Trigger: GTCCACGCTCGTGGTCATCAATGACATCAACAAAGA...GTTACTTTCATCACAGCGGCCCTGGCGCTCCAGTGCCAATAAGAAGTCACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp GAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGCCTCCAAGTTGTTTTAAAGTTCTGTaGCTTGTCTGGCGTCGATGT +
Preference number: 5 (lower is better)
Translates to: ESQGSPSEGSCAWILPPSCFKVL*LVWRRC
Trigger: ACATCGACGCCAGACAAGCAACAGAACTTTAAAACA...ACTTGGAGGCAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTAAGTCTGCTCCCAGTCTaGGCCACGCTCATGGAAACC +
Preference number: 5 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLSLLPV*ATLMET
Trigger: GGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGACT...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp TTCTTTCCCTGCCCTTTCAGTACGGTGGGGATTGCAGCTGCTGAGCAGGGATTCATACTGTGCCAGGCATaGTTAGCAACTGGGAATATG +
Preference number: 5 (lower is better)
Translates to: FFPCPFSTVGIAAAEQGFILCQA*LATGNM
Trigger: CATATTCCCAGTTGCTAACAATGCCTGGCACAGTAT...GAATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGAAAGGGCAGGGAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS TCA 90 bp GGGACACTGTCCAACAAAGATTCTACCTCTCCCTCGCTATTTCCCTaGTACCTGGCAAGCTGGGTGTATTCTTCCAAAAGTTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: GTLSNKDSTSPSLFP*YLASWVYSSKSFPP
Trigger: GGGTGGGAAACTTTTGGAAGAATACACCCAGCTTGCCAGGTATCAGGGAAATAGCGAGGGAGAGGTAGAATCTTTGTTGGACAGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491497.1
CDS-3UTR CAA 90 bp GAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCCCCTTCTAGTTCCCAAATGCTGTGGCCATAACTaGCTCTCTTCTCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: ELELSPAGTIPTPLLVPKCCGHN*LSSHGG
Trigger: GCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCA...TTTGGGAACTAGAAGGGGAGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS TCA 90 bp AGTCATCTCCGGGAACTATCCTTGGTTTTCCCAAGACTCTCTCCTTaGCTGTGCACTTGCGCAGCTTTACTGACTCGAAGCATATTTCCC +
Preference number: 5 (lower is better)
Translates to: SHLRELSLVFPRLSP*LCTCAALLTRSIFP
Trigger: GGGAAATATGCTTCGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGGAAAACCAAGGATAGTTCCCGGAGATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000491497.1
ENST00000496861.5
CDS-3UTR CAA 90 bp ACAATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATCCTTGACTGTGCACTaGCGCAGCTTTACTGACTCG +
Preference number: 5 (lower is better)
Translates to: TIPTPLLVPKGDVQTQTLSLTVH*RSFTDS
Trigger: CGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGA...TAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR CAA 90 bp AATGAGCCAGGAGGTCTAGAACTGGAGCTTAGTCCAGCTGGTACAATACCAACTCTCCGGGAACTATCCTaGGTTTTCCCAAGACTCTCT +
Preference number: 5 (lower is better)
Translates to: NEPGGLELELSPAGTIPTLRELS*VFPRLS
Trigger: AGAGAGTCTTGGGAAAACCAAGGATAGTTCCCGGAG...AGTTGGTATTGTACCAGCTGGACTAAGCTCCAGTTCTAGACCTCCTGGCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368007.8
CDS-3UTR CAA 90 bp TTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTGGATCCTGTGTTTTAAAGTTCTGTaGCTTGTCTGGCGTCGATGT +
Preference number: 5 (lower is better)
Translates to: FHQESQGSPSEGSCAWILCFKVL*LVWRRC
Trigger: ACATCGACGCCAGACAAGCAACAGAACTTTAAAACA...CAGGATCCAGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS-3UTR CAA 90 bp AATACCAACTCCCCTTCTAGTTCCCAAAGGCGATGTCCAGACACAGACTTTATGACAGCTAGACCAATCTaGCCTGCTGGTGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: NTNSPSSSQRRCPDTDFMTARPI*PAGVLT
Trigger: TGTCAGCACACCAGCAGGCAAGATTGGTCTAGCTGT...CATAAAGTCTGTGTCTGGACATCGCCTTTGGGAACTAGAAGGGGAGTTGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS CCA 90 bp TGTCCAACAAAGATTCTACCTCTCCCTCGCTATTTCCCTGATACCTaGCAAGCTGGGTGTATTCTTCCAAAAGTTTCCCACCCAGTGGTT +
Preference number: 5 (lower is better)
Translates to: CPTKILPLPRYFPDT*QAGCILPKVSHPVV
Trigger: AACCACTGGGTGGGAAACTTTTGGAAGAATACACCCAGCTTGCCAGGTATCAGGGAAATAGCGAGGGAGAGGTAGAATCTTTGTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491497.1
CDS-3UTR CAA 90 bp CATCTGTGTTCCATCAAGAGAGTCAAGGTTCTCCAAGTGAGGGGAGCTGTGCCTTGTTTTAAAGTTCTGTaGCTTGTCTGGCGTCGATGT +
Preference number: 5 (lower is better)
Translates to: HLCSIKRVKVLQVRGAVPCFKVL*LVWRRC
Trigger: ACATCGACGCCAGACAAGCAACAGAACTTTAAAACA...AGGCACAGCTCCCCTCACTTGGAGAACCTTGACTCTCTTGATGGAACACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
CDS CCA 90 bp ACGCTCTTTATAAGAAATTATAGGCTAAGGGACAAGACCATACAGTaGGAAGATGGAGAAAGGGGCTCTGCTCGCCGCCTGAATAGTTCA +
Preference number: 5 (lower is better)
Translates to: TLFIRNYRLRDKTIQ*EDGERGSARRLNSS
Trigger: TGAACTATTCAGGCGGCGAGCAGAGCCCCTTTCTCCATCTTCCCACTGTATGGTCTTGTCCCTTAGCCTATAATTTCTTATAAAGAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491497.1
ENST00000496861.5
CDS TCA 90 bp GCTCGCCGCCTGAATAGTTCAACTTCCAATGATCTCACATTAAACTaGAGCCTCTTTCCTCTGACAAACGTTTCCGCAGTCCAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ARRLNSSTSNDLTLN*SLFPLTNVSAVQKS
Trigger: TGACTTTTGGACTGCGGAAACGTTTGTCAGAGGAAAGAGGCTTCAGTTTAATGTGAGATCATTGGAAGTTGAACTATTCAGGCGGCGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491497.1
ENST00000496861.5
CDS CCA 90 bp GATTTCATAGCACAGGGAAGCAAATTTAATGCTAAGGGGTGCAAGTaGAGAGGCAGGAAAGCTGGACTTCCTTTTGATCATGCTCTTACA +
Preference number: 5 (lower is better)
Translates to: DFIAQGSKFNAKGCK*RGRKAGLPFDHALT
Trigger: TGTAAGAGCATGATCAAAAGGAAGTCCAGCTTTCCTGCCTCTCCACTTGCACCCCTTAGCATTAAATTTGCTTCCCTGTGCTATGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461376.1
CDS-3UTR CAA 90 bp AACTTTCTGAGCAGTTATCATTTCTTGATGTGGTTGGATTGTAGGAAAAATGTGTCAGTACGGTGGGGATaGCAGCTGCTGAGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: NFLSSYHFLMWLDCRKNVSVRWG*QLLSRD
Trigger: ATCCCTGCTCAGCAGCTGCAATCCCCACCGTACTGA...CACATTTTTCCTACAATCCAACCACATCAAGAAATGATAACTGCTCAGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp TGTGGTTGGATTGTAGGAAAAATGTGGAGGGATGATTCTGGGCTGCAAAGGCCACATTTCTTGATGTGGTaGGATTGTAGGAAAAATGTG +
Preference number: 5 (lower is better)
Translates to: CGWIVGKMWRDDSGLQRPHFLMW*DCRKNV
Trigger: CACATTTTTCCTACAATCCAACCACATCAAGAAATG...TGGCCTTTGCAGCCCAGAATCATCCCTCCACATTTTTCCTACAATCCAACCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS-3UTR CAA 90 bp AACTCTGAGGTGTATATTCATTCATCCCTGTTTATAGATGACAGCACTGAGAATTTAAAGTTCTGTTGCTaGTCTGGCGTCGATGTTACC +
Preference number: 5 (lower is better)
Translates to: NSEVYIHSSLFIDDSTENLKFCC*SGVDVT
Trigger: GGTAACATCGACGCCAGACAAGCAACAGAACTTTAA...ATTCTCAGTGCTGTCATCTATAAACAGGGATGAATGAATATACACCTCAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS CCA 72 bp CGCCCCGCCCTCCACCCTCCCGCCGCCCGCTCCAGTTaGCCCGTCCCTCCCCGCCTCTCCCAGAGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: RPALHPPAARSS*PVPPRLSQRQH
Trigger: ATGCTGCCTCTGGGAGAGGCGGGGAGGGACGGGCCAACTGGAGCGGGCGGCGGGAGGGTGGAGGGCGGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368007.8
ENST00000496861.5
CDS CCA 72 bp CAAAACCATTCGCAGGGTCCGATCCGGAGGGCGGTCTaGAGCCAGAAGCGCCGCAGCGAGTGGGCGGTAACT +
Preference number: 6 (lower is better)
Translates to: QNHSQGPIRRAV*SQKRRSEWAVT
Trigger: AGTTACCGCCCACTCGCTGCGGCGCTTCTGGCTCCAGACCGCCCTCCGGATCGGACCCTGCGAATGGTTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496768.5
CDS GCA 72 bp TGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTaGCCTACGTCACCCTCAAGAGGAGACGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: CSCCASSLATTC*PTSPSRGDGLP
Trigger: TGGGAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368008.5
CDS GCA 72 bp TGCTGCAGCTGCTGCGCATCATCACTCGCCACGACCTaGTGCCCTACGTCACCCTCAAGAGGAGACGGGCTC +
Preference number: 6 (lower is better)
Translates to: CCSCCASSLATT*CPTSPSRGDGL
Trigger: GAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368008.5
ENST00000479728.1
CDS GCA 72 bp TGCAGCTGCTGCGCATCATCACTCGCCACGACCTGCTaGCCTACGTCACCCTCAAGAGGAGACGGGCTCGAT +
Preference number: 6 (lower is better)
Translates to: CSCCASSLATTC*PTSPSRGDGLD
Trigger: ATCGAGCCCGTCTCCTCTTGAGGGTGACGTAGGGCAGCAGGTCGTGGCGAGTGATGATGCGCAGCAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479728.1
CDS CCA 72 bp CAGATAGTTGAGGTCTATTCGGGCAAGGCAGAGGCCTaGCCCCTCAGAGCAGCGGGCCACCACTGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: QIVEVYSGKAEA*PLRAAGHHCSP
Trigger: TGGGGAACAGTGGTGGCCCGCTGCTCTGAGGGGCCAGGCCTCTGCCTTGCCCGAATAGACCTCAACTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS TCA 72 bp ACACAGGCAGGTGTCGGCGCAACTGTCGCAGATAGTTaGGGTCTATTCGGGCAAGGCAGAGGCCTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: TQAGVGATVADS*GLFGQGRGLAP
Trigger: AGGGGCCAGGCCTCTGCCTTGCCCGAATAGACCTCAACTATCTGCGACAGTTGCGCCGACACCTGCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS GCA 72 bp ACAGTGGGTGACCCAGATTGCCATAGAGGTCAGGCCTaGGGTGCTGGAACACAGGCAGGTGTCGGCGCAACT +
Preference number: 6 (lower is better)
Translates to: TVGDPDCHRGQA*GAGTQAGVGAT
Trigger: AGTTGCGCCGACACCTGCCTGTGTTCCAGCACCGCAGGCCTGACCTCTATGGCAATCTGGGTCACCCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS GCA 72 bp AGCGGGCCACCACTGTTCCCCAGGGGTCTACCACCATaGTGTGGCCATAACTTGCTCTCTTCTCATGGTGGC +
Preference number: 6 (lower is better)
Translates to: SGPPLFPRGLPP*CGHNLLSSHGG
Trigger: GCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCTGGGGAACAGTGGTGGCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS CAA 90 bp CCACCACTGTTCCCCAGGGGTCTACCACCATGCTGTGGCCATAACTaGCTCTCTTCTCATGGTGGCGTCCACACTGTGCTGCTGCCACTA +
Preference number: 6 (lower is better)
Translates to: PPLFPRGLPPCCGHN*LSSHGGVHTVLLPL
Trigger: TAGTGGCAGCAGCACAGTGTGGACGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCTGGGGAACAGTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS TCA 72 bp CAGACAGGTGTAGCGTCTCTGCAGGGTCCCGTGCAATaGAGTCAAATGCCTCAGGCAGGAAAGCCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: QTGVASLQGPVQ*SQMPQAGKPGR
Trigger: CCTGCCTGGCTTTCCTGCCTGAGGCATTTGACTTCATTGCACGGGACCCTGCAGAGACGCTACACCTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS GCA 72 bp TCCCCAGGGGTCTACCACCATGCTGTGGCCATAACTTaGTCTCTTCTCATGGTGGCGTCCACACTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: SPGVYHHAVAIT*SLLMVASTLCC
Trigger: GCAGCACAGTGTGGACGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS GCA 72 bp TGCTCTCTTCTCATGGTGGCGTCCACACTGTGCTGCTaGCACTACATAGCACTGGGTTTCGATAGCACGGGC +
Preference number: 6 (lower is better)
Translates to: CSLLMVASTLCC*HYIALGFDSTG
Trigger: GCCCGTGCTATCGAAACCCAGTGCTATGTAGTGGCAGCAGCACAGTGTGGACGCCACCATGAGAAGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS CAA 72 bp TTCCCCAGGGGTCTACCACCATGCTGTGGCCATAACTaGCTCTCTTCTCATGGTGGCGTCCACACTGTGCTG +
Preference number: 6 (lower is better)
Translates to: FPRGLPPCCGHN*LSSHGGVHTVL
Trigger: CAGCACAGTGTGGACGCCACCATGAGAAGAGAGCAAGTTATGGCCACAGCATGGTGGTAGACCCCTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368007.8
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
CDS CAA 72 bp ACAGGTGACTCAAGACTGGGCCCAGGCATGGTAGAGTaGCTTTCACACATAGGCCCCTGCCCTGGAATCTCT +
Preference number: 6 (lower is better)
Translates to: TGDSRLGPGMVE*LSHIGPCPGIS
Trigger: AGAGATTCCAGGGCAGGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGGGCCCAGTCTTGAGTCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000479266.5
ENST00000485594.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CAA 72 bp GGTGCAAGTGGAGAGGCAGGAAAGCTGGACTTCCTTTaGATCATGCTCTTACAGGGCACGTTGACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GASGEAGKLDFL*IMLLQGTLTQG
Trigger: GCCCTGGGTCAACGTGCCCTGTAAGAGCATGATCAAAAGGAAGTCCAGCTTTCCTGCCTCTCCACTTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461376.1
CDS CAA 90 bp GCAGCCTCTCGAACCAGCTCAGCACATGTTTTAAAGTTCTGTTGCTaGTCTGGCGTCGATGTTACCTGGCACACAGCCACCAGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: AASRTSSAHVLKFCC*SGVDVTWHTATRGS
Trigger: ACTGCCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTGGTTCGAGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CAA 90 bp TCTGGCAGCCTCTCGAACCAGCTCAGCACATGTTTTAAAGTTCTGTaGCTTGTCTGGCGTCGATGTTACCTGGCACACAGCCACCAGGGG +
Preference number: 6 (lower is better)
Translates to: SGSLSNQLSTCFKVL*LVWRRCYLAHSHQG
Trigger: CCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTGGTTCGAGAGGCTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CCA 72 bp TTAAAGTTCTGTTGCTTGTCTGGCGTCGATGTTACCTaGCACACAGCCACCAGGGGCAGTTCGCAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: LKFCCLSGVDVT*HTATRGSSQEE
Trigger: TTCCTCCTGCGAACTGCCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000473918.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CAA 90 bp CAGCAGCACGTGACAATTGTAGATTTTCTGAGTCTGCTCCCAGTCTaGGCCACGCTCATGGAAACCACCCAAGGACAGCCAGAGTCCACA +
Preference number: 6 (lower is better)
Translates to: QQHVTIVDFLSLLPV*ATLMETTQGQPEST
Trigger: TGTGGACTCTGGCTGTCCTTGGGTGGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGACTCAGAAAATCTACAATTGTCACGTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS TCA 72 bp CTCCCAGTGGGCTGGGCCTGTAATGGATCCAAAAGCTaGAGGATAGGTAAGTATCTCTGCTCCAGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: LPVGWACNGSKS*RIGKYLCSSLS
Trigger: GCTCAAGCTGGAGCAGAGATACTTACCTATCCTTCAGCTTTTGGATCCATTACAGGCCCAGCCCACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS GCA 72 bp CCAGGCATGGTAGAGTTGCTTTCACACATAGGCCCCTaGCCTGGAATCTCTACGTCACACAGATGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: PGMVELLSHIGP*PGISTSHRCVF
Trigger: GAAGACACATCTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATGTGTGAAAGCAACTCTACCATGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000479266.5
ENST00000485594.1
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CCA 72 bp CAGCTCAGCACATGTTTTAAAGTTCTGTTGCTTGTCTaGCGTCGATGTTACCTGGCACACAGCCACCAGGGG +
Preference number: 6 (lower is better)
Translates to: QLSTCFKVLLLV*RRCYLAHSHQG
Trigger: CCCCTGGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS TCA 72 bp CGGGAACTATCCTTGGTTTTCCCAAGACTCTCTCCTTaGCTGTGCACTTGCGCAGCTTTACTGACTCGAAGC +
Preference number: 6 (lower is better)
Translates to: RELSLVFPRLSP*LCTCAALLTRS
Trigger: GCTTCGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGGAAAACCAAGGATAGTTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000491497.1
ENST00000496861.5
CDS CAA 72 bp CCGGGAACTATCCTTGGTTTTCCCAAGACTCTCTCCTaGACTGTGCACTTGCGCAGCTTTACTGACTCGAAG +
Preference number: 6 (lower is better)
Translates to: PGTILGFPKTLS*TVHLRSFTDSK
Trigger: CTTCGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGGAAAACCAAGGATAGTTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000491497.1
ENST00000496861.5
CDS CAA 72 bp CGAACCAGCTCAGCACATGTTTTAAAGTTCTGTTGCTaGTCTGGCGTCGATGTTACCTGGCACACAGCCACC +
Preference number: 6 (lower is better)
Translates to: RTSSAHVLKFCC*SGVDVTWHTAT
Trigger: GGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTGGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CAA 72 bp GTGACAATTGTAGATTTTCTGAGTCTGCTCCCAGTCTaGGCCACGCTCATGGAAACCACCCAAGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: VTIVDFLSLLPV*ATLMETTQGQP
Trigger: TGGCTGTCCTTGGGTGGTTTCCATGAGCGTGGCCAAGACTGGGAGCAGACTCAGAAAATCTACAATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS GCA 72 bp AGGATAGGTAAGTATCTCTGCTCCAGCTTGAGCCAATaGCAGAGAGAGTTCAGGGAACCGCATGTCATAGCA +
Preference number: 6 (lower is better)
Translates to: RIGKYLCSSLSQ*QREFREPHVIA
Trigger: TGCTATGACATGCGGTTCCCTGAACTCTCTCTGGCATTGGCTCAAGCTGGAGCAGAGATACTTACCTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000485594.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CCA 72 bp CATGGTAGAGTTGCTTTCACACATAGGCCCCTGCCCTaGAATCTCTACGTCACACAGATGTGTCTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: HGRVAFTHRPLP*NLYVTQMCLPV
Trigger: TACAGGAAGACACATCTGTGTGACGTAGAGATTCCAGGGCAGGGGCCTATGTGTGAAAGCAACTCTACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000479266.5
ENST00000485594.1
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS CCA 72 bp ATAAGAAATTATAGGCTAAGGGACAAGACCATACAGTaGGAAGATGGAGAAAGGGGCTCTGCTCGCCGCCTG +
Preference number: 6 (lower is better)
Translates to: IRNYRLRDKTIQ*EDGERGSARRL
Trigger: CAGGCGGCGAGCAGAGCCCCTTTCTCCATCTTCCCACTGTATGGTCTTGTCCCTTAGCCTATAATTTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491497.1
ENST00000496861.5
CDS CAA 72 bp CTCTCGAACCAGCTCAGCACATGTTTTAAAGTTCTGTaGCTTGTCTGGCGTCGATGTTACCTGGCACACAGC +
Preference number: 6 (lower is better)
Translates to: LSNQLSTCFKVL*LVWRRCYLAHS
Trigger: GCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCTGAGCTGGTTCGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000368007.8
ENST00000368008.5
ENST00000368009.7
ENST00000392190.9
ENST00000461376.1
ENST00000477684.5
ENST00000478277.5
ENST00000479266.5
ENST00000485594.1
ENST00000486962.5
ENST00000491497.1
ENST00000492411.5
ENST00000496768.5
ENST00000496861.5
CDS TCA 72 bp CCTGGTGATGAAGCCCAGCCTGAGGAAGGTGAGATATaGGGACACCAACCCCTTCTTCAAGCAATAAATTTC +
Preference number: 6 (lower is better)
Translates to: PGDEAQPEEGEI*GHQPLLQAINF
Trigger: GAAATTTATTGCTTGAAGAAGGGGTTGGTGTCCTCATATCTCACCTTCCTCAGGCTGGGCTTCATCACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491497.1
ENST00000496861.5
CDS CAA 72 bp CTTGGTTTTCCCAAGACTCTCTCCTTGACTGTGCACTaGCGCAGCTTTACTGACTCGAAGCATATTTCCCCT +
Preference number: 6 (lower is better)
Translates to: LGFPKTLSLTVH*RSFTDSKHISP
Trigger: AGGGGAAATATGCTTCGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGGAAAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000491497.1
ENST00000496861.5
CDS CAA 90 bp GGAACTATCCTTGGTTTTCCCAAGACTCTCTCCTTGACTGTGCACTaGCGCAGCTTTACTGACTCGAAGCATATTTCCCCTTTCACCAGA +
Preference number: 6 (lower is better)
Translates to: GTILGFPKTLSLTVH*RSFTDSKHISPFTR
Trigger: TCTGGTGAAAGGGGAAATATGCTTCGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGGAAAACCAAGGATAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000491497.1
ENST00000496861.5
CDS CAA 90 bp AAGTCATCTCCGGGAACTATCCTTGGTTTTCCCAAGACTCTCTCCTaGACTGTGCACTTGCGCAGCTTTACTGACTCGAAGCATATTTCC +
Preference number: 6 (lower is better)
Translates to: KSSPGTILGFPKTLS*TVHLRSFTDSKHIS
Trigger: GGAAATATGCTTCGAGTCAGTAAAGCTGCGCAAGTGCACAGTCAAGGAGAGAGTCTTGGGAAAACCAAGGATAGTTCCCGGAGATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368007.8
ENST00000491497.1
ENST00000496861.5
CDS CCA 72 bp AAGATTCTACCTCTCCCTCGCTATTTCCCTGATACCTaGCAAGCTGGGTGTATTCTTCCAAAAGTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: KILPLPRYFPDT*QAGCILPKVSH
Trigger: GTGGGAAACTTTTGGAAGAATACACCCAGCTTGCCAGGTATCAGGGAAATAGCGAGGGAGAGGTAGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491497.1
CDS TCA 72 bp TCCAACAAAGATTCTACCTCTCCCTCGCTATTTCCCTaGTACCTGGCAAGCTGGGTGTATTCTTCCAAAAGT +
Preference number: 6 (lower is better)
Translates to: SNKDSTSPSLFP*YLASWVYSSKS
Trigger: ACTTTTGGAAGAATACACCCAGCTTGCCAGGTATCAGGGAAATAGCGAGGGAGAGGTAGAATCTTTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491497.1
CDS TCA 72 bp CTGAATAGTTCAACTTCCAATGATCTCACATTAAACTaGAGCCTCTTTCCTCTGACAAACGTTTCCGCAGTC +
Preference number: 6 (lower is better)
Translates to: LNSSTSNDLTLN*SLFPLTNVSAV
Trigger: GACTGCGGAAACGTTTGTCAGAGGAAAGAGGCTTCAGTTTAATGTGAGATCATTGGAAGTTGAACTATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491497.1
ENST00000496861.5