RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NISCH (Homo sapiens)

Ensembl gene IDs: ENSG00000010322

Ensembl transcript IDs: ENST00000345716.9, ENST00000420808.2, ENST00000460759.1, ENST00000464280.5, ENST00000467594.1, ENST00000474188.1, ENST00000479054.5, ENST00000481211.1, ENST00000485765.5, ENST00000488157.5, ENST00000488243.1, ENST00000488380.5, ENST00000489895.5, ENST00000490425.1

Found 930 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTaGCAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCC +
Preference number: 1 (lower is better)
Translates to: ADTTLVCTAVPPVGG*QHTDSPEGPGILTP
Trigger: GGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR TCA 90 bp CCAGGAGCCAACCTGCTTGTGCTGCCGGTGAGGGAATGGGTCCCATaGGCCAACAGCCCCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: PGANLLVLPVREWVP*ANSPEPVQRAASGP
Trigger: AGGCCCTGAGGCTGCCCTCTGAACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGCAGGTTGGCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR CCA 90 bp CCACAACAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTaGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTC +
Preference number: 1 (lower is better)
Translates to: PQQQTRHWCARLYHL*EADSTPTALRGPAF
Trigger: GAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTGTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR TCA 90 bp ACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATaGGACCTGCTTCACTCACTCATCTCCGAGGATGCCTGGGTTCAG +
Preference number: 1 (lower is better)
Translates to: TPSPLPWGPGQQTRS*DLLHSLISEDAWVQ
Trigger: CTGAACCCAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR TCA 90 bp AGCCCGGCTTCCTGTAACCAGGAGCCAACCTGCTTGTGCTGCCGGTaGGGGAATGGGTCCCATGAGCCAACAGCCCCGAGCCTGTTCAGA +
Preference number: 1 (lower is better)
Translates to: SPASCNQEPTCLCCR*GNGSHEPTAPSLFR
Trigger: TCTGAACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGCAGGTTGGCTCCTGGTTACAGGAAGCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR GCA 90 bp CCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTaGTTCACTCACTCATCTCCGAGGATGCCTGGGTTCAGAGGTGAA +
Preference number: 1 (lower is better)
Translates to: PLFRGGRASRHAHET*FTHSSPRMPGFRGE
Trigger: TTCACCTCTGAACCCAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR CCA 90 bp GCAGACGAATGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATaGCCCATCTTGGCCCCACAAACATGGTGTTCTGGGGCTGGGTCA +
Preference number: 1 (lower is better)
Translates to: ADEWAWSSMGPQGQR*PILAPQTWCSGAGS
Trigger: TGACCCAGCCCCAGAACACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR CCA 90 bp CAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTaGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCG +
Preference number: 1 (lower is better)
Translates to: QCHVLTTVPQQQTRH*CARLYHLWEADSTP
Trigger: CGGTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR GCA 90 bp TCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTTGCAGTTaGAGCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: SAPQPTLPLILRCCS*SPCFGSGEHFTSPS
Trigger: GGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGCTGCAACTGCAACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR GCA 90 bp GAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTTaGAGTTGCAGCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCC +
Preference number: 1 (lower is better)
Translates to: EHSAPQPTLPLILRC*SCSPCFGSGEHFTS
Trigger: GGAGGTGAAATGCTCACCACTGCCAAAACACGGGCTGCAACTGCAACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR TCA 90 bp CCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTaGAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTAC +
Preference number: 1 (lower is better)
Translates to: PTGSPTCLDQGRPPL*RTIWGGSFQCAFCY
Trigger: GTAGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR TCA 90 bp CCCATCGCTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTaGCCTCAGTGTGCTGCTCTGCGTTGGGCCTTTTGCCTTAACTTG +
Preference number: 1 (lower is better)
Translates to: PIAPRSGILFHISQV*PQCAALRWAFCLNL
Trigger: CAAGTTAAGGCAAAAGGCCCAACGCAGAGCAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAGCGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR TCA 90 bp GACCTGCTTCACTCACTCATCTCCGAGGATGCCTGGGTTCAGAGGTaGAAGCCCTTTGAAAACGCTAAGATAGTGGGCAGACGAATGGGC +
Preference number: 1 (lower is better)
Translates to: DLLHSLISEDAWVQR*KPFENAKIVGRRMG
Trigger: GCCCATTCGTCTGCCCACTATCTTAGCGTTTTCAAAGGGCTTTCACCTCTGAACCCAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR GCA 90 bp GAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTaGATTCTGCTACCAGCCTCAGGATTAGCAGCAAGATGCCAACAG +
Preference number: 1 (lower is better)
Translates to: ETSTLKNNMGWELPM*ILLPASGLAARCQQ
Trigger: CTGTTGGCATCTTGCTGCTAATCCTGAGGCTGGTAGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR CCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGCCCTCCCCTCTTCCGTaGGGGCCGGGCCAGCAGACA +
Preference number: 2 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLPSPLP*GPGQQT
Trigger: TGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGG...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAAAAAGCCTGCTGCCCTaGCCCAGTAGGCGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: WEADSTPTALRGPAFSLPKSLLP*PSRRQA
Trigger: AGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR CCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCCCTCCCCTCTTCCGTaGGGGCCGGGCCAGCAGACA +
Preference number: 2 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRPSPLP*GPGQQT
Trigger: TGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGG...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGAGGAGGGGGCTGAGCTaGTGCAGAGGCTTCTCCGAC +
Preference number: 2 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLRRGLS*CRGFSD
Trigger: GTCGGAGAAGCCTCTGCACCAGCTCAGCCCCCTCCT...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCCTTTTGCCTTAACTTaGATGCTTCTCCCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RLQEPGQAASFPACPEPRPFALT*MLLPSS
Trigger: GGAAGAGGGGAGAAGCATTCAAGTTAAGGCAAAAGG...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp GCTTGTGCTGCCGGTGAGGGAATGGGTCCCATGAGCCAACAGCCCCGAGCCTGTGCCTGTCAGACACCCTaGGGTCTCCTAGAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: ACAAGEGMGPMSQQPRACACQTP*GLLEEL
Trigger: CAGCTCCTCTAGGAGACCGCAGGGTGTCTGACAGGC...ACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGAGAACACAAAAGCCTaGTGCCCTGCCCCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLENTKA*CPAPVG
Trigger: GCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR TCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCATGCTGGGAGGGCTGCTaGGCATTCTGCACCACAGCC +
Preference number: 2 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTACWEGC*AFCTTA
Trigger: GGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCA...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAACACAAAAGCCTGCTaGCCTGCCCCAGTAGGCGTC +
Preference number: 2 (lower is better)
Translates to: QQTRHWCARLYHLWEADSNTKAC*PAPVGV
Trigger: GACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR GCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCGGCGGCGTCCTTTCCTaGGTGTCCCGAGCCTCGGCT +
Preference number: 2 (lower is better)
Translates to: ARVLAVVSISPPLPGILSGGVLS*VSRASA
Trigger: AGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCC...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTACCAGGTCAAGGGGTaGGAATGTTTTTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: AHPPLFRGGRASRHAHETYQVKG*ECFSGS
Trigger: AGAGCCAGAAAAACATTCCCACCCCTTGACCTGGTA...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCCACCTGTGGGAGGCTaGCAGCACACCGACAGCCCT +
Preference number: 2 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWPPVGG*QHTDSP
Trigger: AGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR TCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCCTGTGTCCCTGGCCTTaGGAAGCAGATGCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSLCPWP*EADAAP
Trigger: GGGAGCTGCATCTGCTTCTCAAGGCCAGGGACACAG...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp GATAGTGGGCAGACGAATGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATAGGGAATGGGTCCCATaGGCCAACAGCCCCGAGCCT +
Preference number: 2 (lower is better)
Translates to: DSGQTNGPGLPWVHRDRDREWVP*ANSPEP
Trigger: AGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCT...ATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGCCCACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR TCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTTGCTTGTGCTGCCGGTaGGGGAATGGGTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCCLCCR*GNGSHE
Trigger: CTCATGGGACCCATTCCCTCACCGGCAGCACAAGCA...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR GCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGGTGTGACCTCAGTGTaGTGCTCTGCGTTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSGVTSV*CSALGL
Trigger: AAGGCCCAACGCAGAGCAGCACACTGAGGTCACACC...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTCTCATCCTCCGATGTTaGAGTTGCAGCCCGTGTTTT +
Preference number: 2 (lower is better)
Translates to: PPQARLAALQEAASGKLSLILRC*SCSPCF
Trigger: AAAACACGGGCTGCAACTGCAACATCGGAGGATGAG...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTGAAAATCCCCACCAGTaGGGTTACCAGGTCAAGGGG +
Preference number: 2 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCENPHQ*GYQVKG
Trigger: CCCCTTGACCTGGTAACCCCACTGGTGGGGATTTTC...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCACCTGTGGGAGGCTaGCAGCACACCGACAGCCCT +
Preference number: 2 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPPVGG*QHTDSP
Trigger: AGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGAGAACACAAAAGCCTaGTGCCCTGCCCCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVENTKA*CPAPVG
Trigger: GCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR GCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCCTCCGATGTTGCAGTTaGAGCCCGTGTTTTGGCAGT +
Preference number: 2 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSLRCCS*SPCFGS
Trigger: ACTGCCAAAACACGGGCTGCAACTGCAACATCGGAG...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTCTGACAGAAGCAAAATaGGCAATCATCCTGGCACCT +
Preference number: 2 (lower is better)
Translates to: PPQARLAALQEAASGKLSLTEAK*AIILAP
Trigger: AGGTGCCAGGATGATTGCCCATTTTGCTTCTGTCAG...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTCCACAGGGACAGAGATaGCCCATCTTGGCCCCACAA +
Preference number: 2 (lower is better)
Translates to: LQEAASGKLSHRDITSLAPQGQR*PILAPQ
Trigger: TTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGG...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR CAA 90 bp CGACTCTCCCTCTCATCCTCCGATGTTGCAGTTGCAGCCCGTGTTTaGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCC +
Preference number: 2 (lower is better)
Translates to: RLSLSSSDVAVAARV*AVVSISPPLPGILS
Trigger: GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGCTGCAACTGCAACATCGGAGGATGAGAGGGAGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTACTCATCTCCGAGGATaGCTGGGTTCAGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCTHLRG*LGSEVK
Trigger: TTTCACCTCTGAACCCAGGCATCCTCGGAGATGAGT...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCGGCTGTACCACCTGTaGGAGGCTGACAGCACACCG +
Preference number: 2 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRLYHL*EADSTP
Trigger: CGGTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR CCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTTGTGCTGCTCTGCGTTaGGCCTTTTGCCTTAACTTG +
Preference number: 2 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRCAALR*AFCLNL
Trigger: CAAGTTAAGGCAAAAGGCCCAACGCAGAGCAGCACA...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTGCCTGGGTTCAGAGGTaGAAGCCCTTTGAAAACGCT +
Preference number: 2 (lower is better)
Translates to: LQEAASGKLSHRDITSLAAWVQR*KPFENA
Trigger: AGCGTTTTCAAAGGGCTTTCACCTCTGAACCCAGGC...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAAACACAAAAGCCTGCTaGCCTGCCCCAGTAGGCGTC +
Preference number: 2 (lower is better)
Translates to: SGSGETSTLKNNMGWELPNTKAC*PAPVGV
Trigger: GACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR GCA 90 bp CCACAAACATGGTGTTCTGGGGCTGGGTCACCCCACAGAGATGAGGCAGTGATAAAGCAAGCTTTTCCCTaGACAGGGATTCGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: PQTWCSGAGSPHRDEAVIKQAFP*TGIRAP
Trigger: TGGAGCCCGAATCCCTGTGCAGGGAAAAGCTTGCTT...TATCACTGCCTCATCTCTGTGGGGTGACCCAGCCCCAGAACACCATGTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCATGTTCACATTCTCTaGGAGGACAGTCAAATTAAG +
Preference number: 2 (lower is better)
Translates to: QQTRHWCARLYHLWEADSHVHIL*EDSQIK
Trigger: CTTAATTTGACTGTCCTCGCAGAGAATGTGAACATG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR CCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACCTGCAGCTGCAGCCTaGGGACATGGTGCATCCCCA +
Preference number: 2 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPPAAAA*GHGASP
Trigger: TGGGGATGCACCATGTCCCCAGGCTGCAGCTGCAGG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTTCTCACTCCCAACATaGGAAAGAATTAACACAACA +
Preference number: 2 (lower is better)
Translates to: QQTRHWCARLYHLWEADSFSLPT*ERINTT
Trigger: TGTTGTGTTAATTCTTTCTCATGTTGGGAGTGAGAA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR GCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGCTCAGTGTGCTGCTCTaGGTTGGGCCTTTTGCCTTA +
Preference number: 2 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGLSVLL*VGPFAL
Trigger: TAAGGCAAAAGGCCCAACGCAGAGCAGCACACTGAG...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCTACCAGGTCAAGGGGTaGGAATGTTTTTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: ARVLAVVSISPPLPGILSYQVKG*ECFSGS
Trigger: AGAGCCAGAAAAACATTCCCACCCCTTGACCTGGTA...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTCTGCGTTGGGCCTTTTaGCTTAACTTGAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: LQEAASGKLSHRDITSLALRWAF*LNLNAS
Trigger: AGAAGCATTCAAGTTAAGGCAAAAGGCCCAACGCAG...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGCTGCGTTGGGCCTTTTaGCTTAACTTGAATGCTTCT +
Preference number: 2 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLLRWAF*LNLNAS
Trigger: AGAAGCATTCAAGTTAAGGCAAAAGGCCCAACGCAG...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCATGTTCACATTCTCTaGGAGGACAGTCAAATTAAG +
Preference number: 2 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVHVHIL*EDSQIK
Trigger: CTTAATTTGACTGTCCTCGCAGAGAATGTGAACATG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR-3UTR TCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGCTTAAAACATCGGGTTaGACTGTTTTCCCAAGACCT +
Preference number: 2 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGLKTSG*TVFPRP
Trigger: AGGTCTTGGGAAAACAGTTCAACCCGATGTTTTAAG...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTTCTCACTCCCAACATaGGAAAGAATTAACACAACA +
Preference number: 2 (lower is better)
Translates to: GETSTLKNNMGWELPMCIFSLPT*ERINTT
Trigger: TGTTGTGTTAATTCTTTCTCATGTTGGGAGTGAGAA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR GCA 72 bp GCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTaGGTGTCCCGAGCCTCGGCTCCACTCGGGACGGCA +
Preference number: 3 (lower is better)
Translates to: ASPGARAGGVLS*VSRASAPLGTA
Trigger: TGCCGTCCCGAGTGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CAA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGTCTCATCCTCCGATGTaGCAGTTGCAGCCCGTGTTT +
Preference number: 3 (lower is better)
Translates to: RLQEPGQAASFPACPEPRSHPPM*QLQPVF
Trigger: AAACACGGGCTGCAACTGCAACATCGGAGGATGAGA...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR CCA 72 bp CAGACACGACACTGGTGTGCACGGCTGTACCACCTGTaGGAGGCTGACAGCACACCGACAGCCCTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: QTRHWCARLYHL*EADSTPTALRG
Trigger: GCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR TCA 72 bp AACCTGCTTGTGCTGCCGGTGAGGGAATGGGTCCCATaGGCCAACAGCCCCGAGCCTGTTCAGAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: NLLVLPVREWVP*ANSPEPVQRAA
Trigger: GGCTGCCCTCTGAACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGCAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR TCA 72 bp CCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATaGGACCTGCTTCACTCACTCATCTCCGAGGATGCC +
Preference number: 3 (lower is better)
Translates to: PLPWGPGQQTRS*DLLHSLISEDA
Trigger: GGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR GCA 72 bp CGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTaGTTCACTCACTCATCTCCGAGGATGCCTGGGTTC +
Preference number: 3 (lower is better)
Translates to: RGGRASRHAHET*FTHSSPRMPGF
Trigger: GAACCCAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR CAA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTCTCATCCTCCGATGTaGCAGTTGCAGCCCGTGTTT +
Preference number: 3 (lower is better)
Translates to: AHPPLFRGGRASRHAHETSHPPM*QLQPVF
Trigger: AAACACGGGCTGCAACTGCAACATCGGAGGATGAGA...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR-3UTR CAA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCCCTCCACAGGCTCGCTaGGCTGCGCTACAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSPPQAR*AALQEA
Trigger: TGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR TCA 72 bp TCCTGTAACCAGGAGCCAACCTGCTTGTGCTGCCGGTaGGGGAATGGGTCCCATGAGCCAACAGCCCCGAGC +
Preference number: 3 (lower is better)
Translates to: SCNQEPTCLCCR*GNGSHEPTAPS
Trigger: GCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGCAGGTTGGCTCCTGGTTACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR CCA 72 bp ATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTaGCAGCTCCAGGTCCCCTGCCCCCACGGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: IENTGSRNHAWC*QLQVPCPHGLS
Trigger: GGAGAGCCCGTGGGGGCAGGGGACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR TCA 72 bp ACCACCTGTGGGAGGCTGACAGCACACCGACAGCCCTaGGGGGCCCGGCATTCTCACTCCCAACATGAGAAA +
Preference number: 3 (lower is better)
Translates to: TTCGRLTAHRQP*GARHSHSQHEK
Trigger: TTTCTCATGTTGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR CCA 72 bp TGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATaGCCCATCTTGGCCCCACAAACATGGTGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: WAWSSMGPQGQR*PILAPQTWCSG
Trigger: CCCAGAACACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR-3UTR CAA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCACGGGCTCTCCCACTaGTCTGGATCAGGGGAGACC +
Preference number: 3 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVHGLSH*SGSGET
Trigger: GGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR GCA 72 bp GCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTTaGAGTTGCAGCCCGTGTTTTGGCAGTGGTGAGCAT +
Preference number: 3 (lower is better)
Translates to: APQPTLPLILRC*SCSPCFGSGEH
Trigger: ATGCTCACCACTGCCAAAACACGGGCTGCAACTGCAACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR CCA 72 bp GTGTTAACAACGGTCCCACAACAGCAGACACGACACTaGTGTGCACGGCTGTACCACCTGTGGGAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: VLTTVPQQQTRH*CARLYHLWEAD
Trigger: GTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR CCA 72 bp AGGCCTACAGTCATATGGTACCTCCACAGGCTCGCTTaGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: RPTVIWYLHRLA*LRYRRQRQGSF
Trigger: AAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR GCA 72 bp CAGCCGACTCTCCCTCTCATCCTCCGATGTTGCAGTTaGAGCCCGTGTTTTGGCAGTGGTGAGCATTTCACC +
Preference number: 3 (lower is better)
Translates to: QPTLPLILRCCS*SPCFGSGEHFT
Trigger: GGTGAAATGCTCACCACTGCCAAAACACGGGCTGCAACTGCAACATCGGAGGATGAGAGGGAGAGTCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR TCA 72 bp CCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTaGCCTCAGTGTGCTGCTCTGCGTTGGGCCTTTTGC +
Preference number: 3 (lower is better)
Translates to: PRSGILFHISQV*PQCAALRWAFC
Trigger: GCAAAAGGCCCAACGCAGAGCAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR TCA 72 bp TCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTaGAGAACAATATGGGGTGGGAGCTTCCAATGTGCA +
Preference number: 3 (lower is better)
Translates to: SPTCLDQGRPPL*RTIWGGSFQCA
Trigger: TGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR TCA 72 bp CACTCACTCATCTCCGAGGATGCCTGGGTTCAGAGGTaGAAGCCCTTTGAAAACGCTAAGATAGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: HSLISEDAWVQR*KPFENAKIVGR
Trigger: TCTGCCCACTATCTTAGCGTTTTCAAAGGGCTTTCACCTCTGAACCCAGGCATCCTCGGAGATGAGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
3UTR CCA 72 bp CAGAAATCCTTAGTCAAGAGTCTGACAGAAGCAAAATaGGCAATCATCCTGGCACCTAACCCCATCGCTCCA +
Preference number: 3 (lower is better)
Translates to: QKSLVKSLTEAK*AIILAPNPIAP
Trigger: TGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTTCTGTCAGACTCTTGACTAAGGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR TCA 72 bp GCTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTaGTATAACCTCCCTGGCTTTTATGTAATAAAATGC +
Preference number: 3 (lower is better)
Translates to: ATGGSVREAFSP*YNLPGFYVIKC
Trigger: GCATTTTATTACATAAAAGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR GCA 72 bp ACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTaGATTCTGCTACCAGCCTCAGGATTAGCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: TLKNNMGWELPM*ILLPASGLAAR
Trigger: TCTTGCTGCTAATCCTGAGGCTGGTAGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR GCA 72 bp AGAATTAACACAACACACACACATGTTCACATTCTCTaGGAGGACAGTCAAATTAAGGTACCAAAGGGAGGA +
Preference number: 3 (lower is better)
Translates to: RINTTHTHVHIL*EDSQIKVPKGG
Trigger: TCCTCCCTTTGGTACCTTAATTTGACTGTCCTCGCAGAGAATGTGAACATGTGTGTGTGTTGTGTTAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGGCTCGGGCCCGAAGGTaGGCGCGGTCGCCATGTTCG +
Preference number: 4 (lower is better)
Translates to: RLQEPGQAASFPACPEPRARARR*ARSPCS
Trigger: CGAACATGGCGACCGCGCGCACCTTCGGGCCCGAGC...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCAGCTCGGGCCCGAAGGTaGGCGCGGTCGCCATGTTCG +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPARARR*ARSPCS
Trigger: CGAACATGGCGACCGCGCGCACCTTCGGGCCCGAGC...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCAGGGCAGGGAGGCAGATaGGGGAGCCACAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPGQGGR*GSHSGR
Trigger: CCTCCCACTGTGGCTCCCGCATCTGCCTCCCTGCCC...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCCGAGCCTCGGCTCCACTCGGGACGGCACACCCTCCCCTCTTCCGTGGGGGCCGTGGGCTTTCCCTGCTaGAGCTGCTCCGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: PEPRLHSGRHTLPSSVGAVGFPC*SCSVTA
Trigger: TGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCAC...GGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCCCGAGTGGAGCCGAGGCTCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GGACGGCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGGATGCAGGGGGCAGCTaGGAGCCGGGAGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: GRHTLPSSVGAGPADTLMDAGGS*EPGVFT
Trigger: GGTGAAGACTCCCGGCTCTCAGCTGCCCCCTGCATC...CATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCACTCGGGACGGCACCCCCACTGGCGCACGTaGGCTTTCCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAASFPACPEPRLHSGRHPHWRT*AFPAAA
Trigger: AGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGG...GTGCCGTCCCGAGTGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCGCCCGAGGTCGGTCTTaGCATCCCCACTGGCGCACG +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETARGRS*HPHWRT
Trigger: CGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGC...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCGCAGGCTGGCGACGTaGCGGAGCGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLRRLAT*RSDGQA
Trigger: TGCCTGCCCGTCGCTCCGGCACGTCGCCAGCCTGCG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGACGGCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGTGCAGAGTGCCCCTCTaGAGAGTGTCCCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRHTLPSSVGAGPADTLMCRVPL*RVSPGH
Trigger: GTGCCCTGGGGACACTCTGCAGAGGGGCACTCTGCA...CATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCAGGACAGACTGCAGAGTaGCCCTCTGCAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPGQTAE*PSAECP
Trigger: GGGACACTCTGCAGAGGGGCACTCTGCAGTCTGTCC...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCATCAGCGTGGCTAAGGTaGGCTTCGATGCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPSAWLR*ASMRPA
Trigger: GGCTGGTCGCATCGAAGCCCACCTTAGCCACGCTGA...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAACGGGGAAGCAGCCCTaGCTGCGCTCCTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPTGKQP*LRSWQP
Trigger: CGGCTGCCAGGAGCGCAGCCAGGGCTGCTTCCCCGT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAGGCCTCGGCTGGGGGTaGGGCTGGAGCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPGLGWG*GWSFHW
Trigger: CCAGTGGAAGCTCCAGCCCCACCCCCAGCCGAGGCC...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCACTCGGGACGGCACAGGAGGGGGCTGAGCTaGTGCAGAGGCTTCTCCGAC +
Preference number: 4 (lower is better)
Translates to: QAASFPACPEPRLHSGRHRRGLS*CRGFSD
Trigger: GTCGGAGAAGCCTCTGCACCAGCTCAGCCCCCTCCT...GTGCCGTCCCGAGTGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCCAGAAGTCCAGCGATaGCGGGGACAGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLQEPGQAASFPACPEPRPEVQR*RGQTAE
Trigger: CTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGG...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCAGGTGTGACCTCAGTGTaGTGCTCTGCGTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPGVTSV*CSALGL
Trigger: AAGGCCCAACGCAGAGCAGCACACTGAGGTCACACC...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCGGACAGACTGCAGAGTaGCCCTCTGCAGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SASPGARAGGVLSCVSRAGQTAE*PSAECP
Trigger: GGGACACTCTGCAGAGGGGCACTCTGCAGTCTGTCC...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCGACGCGCGCTTCCTTaGCCGGCTCGGCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLRRALP*PARLPA
Trigger: AGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCAAGCGGACACTCAGCGTaGCTAAGGTGGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPSGHSA*LRWASM
Trigger: CATCGAAGCCCACCTTAGCCACGCTGAGTGTCCGCT...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAGACCCCGGCACCACCTaGACCTCCGGCTCGGCATGT +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPDPGTT*TSGSAC
Trigger: ACATGCCGAGCCGGAGGTCCAGGTGGTGCCGGGGTC...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAGGCTGCTGCAGGGGCTaGAGCTGGGACTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPGCCRG*SWDFRW
Trigger: CCAGCGGAAGTCCCAGCTCCAGCCCCTGCAGCAGCC...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCACTCGGGACGGCACTTCCCCAGCTTGGTGTaGAGCCCTTCCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QAASFPACPEPRLHSGRHFPSLV*SPSKEE
Trigger: CTCCTCCTTGGAAGGGCTTCACACCAAGCTGGGGAA...GTGCCGTCCCGAGTGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACGATGCCGAAGTCGGTaGGCACAAGGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPRCRSR*AQGRRR
Trigger: TCGCCGCCTGCCTTGTGCTCACCGACTTCGGCATCG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCCCGCGTCAAGCACGTaGCCACCTGCATCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLPASST*PPASGW
Trigger: CCACCCCGATGCAGGTGGTCACGTGCTTGACGCGGG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGCACACCGACAGCCCTaGGGGGCCCGGCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLAHRQP*GARHSH
Trigger: GTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACCACCTGTGGGAGGCTaGCAGCACACCGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPPPVGG*QHTDSP
Trigger: AGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCCCTCCCTGTGTCTaGCCCTGTTGGAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETCPPCV*PCWKQV
Trigger: CACCTGCTTCCAACAGGGTCAGACACAGGGAGGGCA...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp CCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCAGTGACGGCATACAGCTaGAGGGGTCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PGARAGGVLSCVSRASAPVTAYS*RGPMAK
Trigger: CTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCAC...TGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTTCAGCAGAGACACGTaGTCCAGACACGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SASPGARAGGVLSCVSRAFSRDT*SRHGRL
Trigger: CAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAA...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAGCTCCGGCGAGGGCGTaGGTTCCAGAGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPAPARA*VPERTA
Trigger: TGCTGTCCTCTCTGGAACGCACGCCCTCGCCGGAGC...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCGAGCCTCGGCTCCACTCGGGACGGCACACCCTCCCCTCTTCCGTGGGGGCCCTCCGATGTTGCAGTTaGAGCCCGTGTTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PEPRLHSGRHTLPSSVGALRCCS*SPCFGS
Trigger: ACTGCCAAAACACGGGCTGCAACTGCAACATCGGAG...GGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCCCGAGTGGAGCCGAGGCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCCACCCATCCAGGGCCTaGTCTTCACTGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETHPSRA*SSLAPA
Trigger: AGCAGGAGCCAGTGAAGAGCAGGCCCTGGATGGGTG...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCGACGCGCGCTTCCTTaGCCGGCTCGGCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRRALP*PARLPA
Trigger: AGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACCCCACTGGCGCACGTaGGCTTTCCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPPHWRT*AFPAAA
Trigger: AGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGGCCCGAGGTCGGTCTTaGCATCCCCACTGGCGCACG +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLARGRS*HPHWRT
Trigger: CGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGC...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGGCCCGAGGTCGGTCTTaGCATCCCCACTGGCGCACG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLARGRS*HPHWRT
Trigger: CGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGC...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTCAGCGTGGCTAAGGTaGGCTTCGATGCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETSAWLR*ASMRPA
Trigger: GGCTGGTCGCATCGAAGCCCACCTTAGCCACGCTGA...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGACCCCGGCACCACCTaGACCTCCGGCTCGGCATGT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLDPGTT*TSGSAC
Trigger: ACATGCCGAGCCGGAGGTCCAGGTGGTGCCGGGGTC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACCTCCTCCCGCTGGTTaGCAGCCTCGATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPPPPAG*QPRSRQ
Trigger: CTGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCATCGCCCTGTTCACCCTaGCCCTCCTCCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPSPCSP*PSSRWL
Trigger: CAACCAGCGGGAGGAGGGCCAGGGTGAACAGGGCGA...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCTGCGCTCGGCAGGCTaGCCATCCGCAAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLLRSAG*PSAKEP
Trigger: GGGCTCCTTTGCGGATGGCCAGCCTGCCGAGCGCAG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAACCTCCTGGGGACGCTaGTCATTGCTGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPTSWGR*SLLALR
Trigger: GCGCAGGGCCAGCAATGACCAGCGTCCCCAGGAGGT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAGCTGGGACTTCCGCTaGGGCCGGGGCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSWDFR*GRGQSL
Trigger: GAGGCTCTGGCCCCGGCCCCAGCGGAAGTCCCAGCT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCCCTCCCCTCTTCCGTaGGGGCCGGGCCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILPSPLP*GPGQQT
Trigger: TGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGG...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGGAAAATCCCCACCAGTaGGGTTACCAGGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RLQEPGQAASFPACPEPRENPHQ*GYQVKG
Trigger: CCCCTTGACCTGGTAACCCCACTGGTGGGGATTTTC...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCGCTTCTCCGACAATGTaGGGGGCTGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PEPVQRAASGPVRHPAVSASPTM*GAACSC
Trigger: GCAGCTGCAGGCAGCCCCCCACATTGTCGGAGAAGC...GGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAGGCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GGACGGCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGGGCAGGAGCTGCTCCTaGATGTTGCTGGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GRHTLPSSVGAGPADTLMGRSCS*MLLVPK
Trigger: TTTTGGGACCAGCAACATTCAGGAGCAGCTCCTGCC...CATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTTCCCCAGCTTGGTGTaGAGCCCTTCCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETFPSLV*SPSKEE
Trigger: CTCCTCCTTGGAAGGGCTTCACACCAAGCTGGGGAA...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGATGCAGGGGGCAGCTaGGAGCCGGGAGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLDAGGS*EPGVFT
Trigger: GGTGAAGACTCCCGGCTCTCAGCTGCCCCCTGCATC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCCACTCGATGTTGCCTaGGTAGTCCCCGGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLPLDVA*VVPGGR
Trigger: ACGGCCGCCGGGGACTACTCAGGCAACATCGAGTGG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACCACCGAGGACCACATaGGGTGCCTCAGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPPPRTT*GASAPR
Trigger: ACGAGGAGCTGAGGCACCTCATGTGGTCCTCGGTGG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAATCCTGCAGTGGCTCTaGGAAGTAGCGGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPILQWL*EVAAEA
Trigger: GGCCTCCGCCGCTACTTCTCAGAGCCACTGCAGGAT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCGGGCAGGGAGGCAGATaGGGGAGCCACAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILGQGGR*GSHSGR
Trigger: CCTCCCACTGTGGCTCCCGCATCTGCCTCCCTGCCC...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCAGTGGACGAGAGGCTaGTGGCCAGGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLQWTRG*WPGPPP
Trigger: AGGAGGAGGCCCTGGCCAGCAGCCTCTCGTCCACTG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAAGGGAGGAGAGGATGTaGTGGCTGCTGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPREERM*WLLPRD
Trigger: GTCTCGGGGCAGCAGCCAGCACATCCTCTCCTCCCT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTCCCCGGCGGCCGTCTaGACCATGCGCTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSPAAV*TMRLSL
Trigger: CAGTGACAAGCGCATGGTGCAGACGGCCGCCGGGGA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCGGCGGCGTCCTTTCCTaGGTGTCCCGAGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILGGVLS*VSRASA
Trigger: AGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCC...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCGGCTCCTGCTCTACCTaGCCACTCACTCACTCACTG +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETGSCST*PLTHSL
Trigger: CAGTGAGTGAGTGAGTGGGCAGGTAGAGCAGGAGCC...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCCGCGAGGACCAGCCTaGAGAAGGCACTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILPRGPA*RRHCPP
Trigger: GGGAGGGCAGTGCCTTCTGCAGGCTGGTCCTCGCGG...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp GCTTGTGCTGCCGGTGAGGGAATGGGTCCCATGAGCCAACAGCCCCGAGCCTGTGCTGCAGGGGTCCAATaGCAAAGACCTCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: ACAAGEGMGPMSQQPRACAAGVQ*QRPRRP
Trigger: GGGCCGGCGAGGTCTTTGCCATTGGACCCCTGCAGC...ACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTCGGAGACGCTGTTGTaGCTCAGGTCAAGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: AHPPLFRGGRASRHAHETSETLL*LRSSVV
Trigger: GACCACGCTTGACCTGAGCCACAACAGCGTCTCCGA...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGATGCGGGAGCCACAGTaGGAGGGGAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLMREPQ*EGSCWV
Trigger: GACCCAGCAGCTCCCCTCCCACTGTGGCTCCCGCAT...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAGGCAGGAAGATGATCTaGCCAGACCCCGGCACCACC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPGRKMI*PDPGTT
Trigger: GGTGGTGCCGGGGTCTGGCCAGATCATCTTCCTGCC...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTCCGCAAAGGAGCCCTaGGGGCTGCCTCCCGTCCCG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSAKEP*GLPPVP
Trigger: CGGGACGGGAGGCAGCCCCCAGGGCTCCTTTGCGGA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACAGCTGGGACTTCCGCTaGGGCCGGGGCCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSWDFR*GRGQSL
Trigger: GAGGCTCTGGCCCCGGCCCCAGCGGAAGTCCCAGCT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTGCAGGGGCTGGAGCTaGGACTTCCGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHCRGWS*DFRWGR
Trigger: CCGGCCCCAGCGGAAGTCCCAGCTCCAGCCCCTGCA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACAGGATGCTGAGGGCTaGGGCCTTCTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPQDAEG*GLLWLS
Trigger: GCTGAGCCAGAGAAGGCCCCAGCCCTCAGCATCCTG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTGGACTTCACGGCCCTaGCTGGCTCTAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLWTSRP*LALAGP
Trigger: TGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCGAGCCTCGGCTCCACTCGGGACGGCACACCCTCCCCTCTTCCGTGGGGGCCTGTGCTGCTCTGCGTTaGGCCTTTTGCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: PEPRLHSGRHTLPSSVGACAALR*AFCLNL
Trigger: CAAGTTAAGGCAAAAGGCCCAACGCAGAGCAGCACA...GGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCCCGAGTGGAGCCGAGGCTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCACCTGCAGCTGCAGCCTaGGGACATGGTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LPSSVGAGPADTLMRPASPAAAA*GHGASP
Trigger: TGGGGATGCACCATGTCCCCAGGCTGCAGCTGCAGG...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCGCCCTCTCTCCGAACTaGGCCAGCACCTTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSALSPN*ASTLVR
Trigger: CCGGACCAAGGTGCTGGCTCAGTTCGGAGAGAGGGC...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGGAAGCCAAACTCGGTaGGGTCGCCATGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLGSQTR*GRHAGS
Trigger: GCTTCCCGCATGGCGACCTCACCGAGTTTGGCTTCC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCTGGGGTGCAAAGCATaGGCGCAGGTCCGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLLGCKA*AQVRVE
Trigger: TTCCACGCGGACCTGCGCTCATGCTTTGCACCCCAG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTGTGGAAGAGCTCGATaGTGGCGCTGCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSCGRAR*WRCPAG
Trigger: GCCTGCGGGGCAGCGCCATCATCGAGCTCTTCCACA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCATCGAAGACGAGGGTaGGGGCCTGCGGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLHRRRG*GPAGRS
Trigger: AGACCTACCCGCAGGCCCTCACCCTCGTCTTCGATG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCCACCTGTGGGAGGCTaGCAGCACACCGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSPPVGG*QHTDSP
Trigger: AGGGCTGTCGGTGTGCTGTCAGCCTCCCACAGGTGG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCACTGTGTCCCTGGCCTTaGGAAGCAGATGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPSSVGAGPADTLMRPASLCPWP*EADAAP
Trigger: GGGAGCTGCATCTGCTTCTCAAGGCCAGGGACACAG...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCACTCACTCACTCACTaGTCAACAGATGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RLQEPGQAASFPACPEPRHSLTH*STDAGR
Trigger: TCTGCCAGCATCTGTTGATCAGTGAGTGAGTGAGTG...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCGAGCTCTTCAGCCAGTaGCGCGGTGATGCCATTTAT +
Preference number: 4 (lower is better)
Translates to: SASPGARAGGVLSCVSRAELFSQ*RGDAIY
Trigger: ATAAATGGCATCACCGCGGCACTGGCTGAAGAGCTC...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTTTCCCTGCTGCAGCTaGTCCGTGACGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: PEPVQRAASGPVRHPAVSFPCCS*SVTAYS
Trigger: GCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAA...GGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAGGCTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCCAGACACGGGAGGCTaGCTATGCTCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLPDTGG*LCSGPP
Trigger: AGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTGCCGCTCGATGGCCTaGCGGATCAGTGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLCRSMA*RISVLR
Trigger: CCTGAGCACACTGATCCGGCAGGCCATCGAGCGGCA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACATCCAGGCAGGCAGCTaGCGCTCGATGGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHIQAGS*RSMACR
Trigger: CCGGCAGGCCATCGAGCGGCAGCTGCCTGCCTGGAT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCCCCGAGACTCCTGGTaGGGGATCTCGAAGACTGCG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLPRDSW*GISKTA
Trigger: CGCAGTCTTCGAGATCCCGCACCAGGAGTCTCGGGG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCGGATGTGCTGGCTGCTaGCCCGAGACTCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSGCAGC*PETPGA
Trigger: CGCACCAGGAGTCTCGGGGCAGCAGCCAGCACATCC...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTCCGCGTGGAACTCGTaGAGGTTGGCGGCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSAWNS*RLAASE
Trigger: CTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAAAGCACGTGACCACCTaGATCGGGGTGGAACCCGTC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPKHVTT*IGVEPV
Trigger: GACGGGTTCCACCCCGATGCAGGTGGTCACGTGCTT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACTGGGGACAAACACCTaGCACTGGACTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPLGTNT*HWTSRP
Trigger: GGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGCCTCACACCAAGTTCTaGGTCTCCAGGAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLPHTKF*VSRSPG
Trigger: GCCCGGGCTCCTGGAGACGCAGAACTTGGTGTGAGG...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCCGACGCGCGCTTCCTTaGCCGGCTCGGCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSRRALP*PARLPA
Trigger: AGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCG...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAGGCTGCCGTAGAGGATaGGGCTACACAGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPGCRRG*GYTAWP
Trigger: TGGCCATGCTGTGTAGCCCCATCCTCTACGGCAGCC...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCTGCGCTCGGCAGGCTaGCCATCCGCAAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHLRSAG*PSAKEP
Trigger: GGGCTCCTTTGCGGATGGCCAGCCTGCCGAGCGCAG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACCTCCTGGGGACGCTaGTCATTGCTGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSTSWGR*SLLALR
Trigger: GCGCAGGGCCAGCAATGACCAGCGTCCCCAGGAGGT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTTGCAGCCTGGGGACATaGTGCATCCCCACCCATCCA +
Preference number: 4 (lower is better)
Translates to: PSLFRGQPQGLSDTLRSPCSLGT*CIPTHP
Trigger: TGGATGGGTGGGGATGCACCATGTCCCCAGGCTGCA...AGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAGGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGGCTTCTCCGACAATGTaGGGGGCTGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLASPTM*GAACSC
Trigger: GCAGCTGCAGGCAGCCCCCCACATTGTCGGAGAAGC...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCCCAGGTTTAAGGTCTTaGTGTTCCCCAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SASPGARAGGVLSCVSRAPGLRS*CSPAWC
Trigger: ACACCAAGCTGGGGAACATCAAGACCTTAAACCTGG...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCACTGTGCCGTACCTTaGGCACCAGACACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLHCAVP*APDTAP
Trigger: CGGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGGAGCGCCGCACGGCTaGACAGAGTGTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTGAPHG*TECAAG
Trigger: GCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGAGATCTCGGAGCTGGTaGGCAGGAGTGTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLRSRSW*AGVSWG
Trigger: GCCCCAAGACACTCCTGCTCACCAGCTCCGAGATCT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTAGGGAATGGGTCCCATaGGCCAACAGCCCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: PPQARLAALQEAASGKLSREWVP*ANSPEP
Trigger: AGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCT...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCAGTGGACGAGAGGCTaGTGGCCAGGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHQWTRG*WPGPPP
Trigger: AGGAGGAGGCCCTGGCCAGCAGCCTCTCGTCCACTG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAGGAGCCCTGGGGGCTaGCTCCCGTCCCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRSPGG*LPSRGS
Trigger: AGACCCCCGGGACGGGAGGCAGCCCCCAGGGCTCCT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGGTGGCCTGGATGAGGTaGTCACTCGGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLVAWMR*SLGYWA
Trigger: TGCCCAGTACCCGAGTGAGCACCTCATCCAGGCCAC...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCGCAGGCTGGCGACGTaGCGGAGCGACGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRRLAT*RSDGQA
Trigger: TGCCTGCCCGTCGCTCCGGCACGTCGCCAGCCTGCG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACCCGTCAGCCGGAAATaGTGGTCGAAAAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPPVSRK*WSKSPT
Trigger: TGTGGGGCTTTTCGACCAGCATTTCCGGCTGACGGG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGCTGCAGGGGTCCAATaGCAAAGACCTCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHAAGVQ*QRPRRP
Trigger: GGGCCGGCGAGGTCTTTGCCATTGGACCCCTGCAGC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CGGCTTCCTGTAACCAGGAGCCAACCTGCTTGTGCTGCCGGTGAGGGAATGGGTCCCCACTGGCGCACGTaGGCTTTCCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLPVTRSQPACAAGEGMGPHWRT*AFPAAA
Trigger: AGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGG...ACCCATTCCCTCACCGGCAGCACAAGCAGGTTGGCTCCTGGTTACAGGAAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTCAGCGTGGCTAAGGTaGGCTTCGATGCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSAWLR*ASMRPA
Trigger: GGCTGGTCGCATCGAAGCCCACCTTAGCCACGCTGA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACATGCGGGAGCCACAGTaGGAGGGGAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHMREPQ*EGSCWV
Trigger: GACCCAGCAGCTCCCCTCCCACTGTGGCTCCCGCAT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTCGCCCTGTTCACCCTaGCCCTCCTCCCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSPCSP*PSSRWL
Trigger: CAACCAGCGGGAGGAGGGCCAGGGTGAACAGGGCGA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCTGCCCCGAGACTCCTaGTGCGGGATCTCGAAGACT +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLLPRDS*CGISKT
Trigger: AGTCTTCGAGATCCCGCACCAGGAGTCTCGGGGCAG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGAGCAGCTCTAGCACGTaGCCATCAGCAAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSSSST*PSAKAP
Trigger: GGGCGCCTTTGCTGATGGCCACGTGCTAGAGCTGCT...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGACGCTGGTCATTGCTaGCCCTGCGCTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHDAGHC*PCARQA
Trigger: AGCCTGCCGAGCGCAGGGCCAGCAATGACCAGCGTC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTCCTCCGAGGTGGCCTaGATGAGGTGCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSSEVA*MRCSLG
Trigger: CCCGAGTGAGCACCTCATCCAGGCCACCTCGGAGGA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTCTGCGGCGGCTCTTTaGCAAACTCGGGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSAAAL*QTRAVG
Trigger: ACCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCGGCACCTCCCCAAAGTaGTCCAGGGTGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSGTSPK*SRVTLP
Trigger: GGGCAGTGTCACCCTGGACCACTTTGGGGAGGTGCC...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAACAAACACCTGCCACTaGACTTCACGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPTNTCH*TSRPWL
Trigger: CAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCGGCTGTACCACCTGTaGGAGGCTGACAGCACACCG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRLYHL*EADSTP
Trigger: CGGTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCGAAAATCCCCACCAGTaGGGTTACCAGGTCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PEPVQRAASGPVRHPAVSENPHQ*GYQVKG
Trigger: CCCCTTGACCTGGTAACCCCACTGGTGGGGATTTTC...GGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAGGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCCTGCAGCTGCAGCCTaGGGACATGGTGCATCCCCA +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILPAAAA*GHGASP
Trigger: TGGGGATGCACCATGTCCCCAGGCTGCAGCTGCAGG...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCACCACAGGGACAGAGATaGCCCATCTTGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: LPSSVGAGPADTLMRPASPQGQR*PILAPQ
Trigger: TTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGG...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCCCTGATGCAGGGACTTaGATATTGATAGGTCGAACG +
Preference number: 4 (lower is better)
Translates to: SASPGARAGGVLSCVSRAPDAGT*ILIGRT
Trigger: CGTTCGACCTATCAATATTCAAGTCCCTGCATCAGG...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCCTGCCAAGTGGGGATaGCGGCAGTCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHPAKWG*RQSQGL
Trigger: AAGGCCCTGTGACTGCCGTCATCCCCACTTGGCAGG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACCCGGAGATCCAGGTTaGCCAGTGAGTAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPPGDPG*PVSRAC
Trigger: ACAAGCTCTACTCACTGGTCAACCTGGATCTCCGGG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCATCCGGTAGTCGGGGATaGTGCTCAGAGGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPSGSRG*CSEGCS
Trigger: TGAACAACCCTCTGAGCATCATCCCCGACTACCGGA...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTGCCCTCTCTCCGAACTaGGCCAGCACCTTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRALSPN*ASTLVR
Trigger: CCGGACCAAGGTGCTGGCTCAGTTCGGAGAGAGGGC...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GGACGGCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGACCTCCTTGGCTTTCTaGATTGCTTTCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: GRHTLPSSVGAGPADTLMTSLAF*IAFSTS
Trigger: GGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGT...CATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGGAAGCCAAACTCGGTaGGGTCGCCATGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHGSQTR*GRHAGS
Trigger: GCTTCCCGCATGGCGACCTCACCGAGTTTGGCTTCC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCACTGTGCCGTACCTTaGGCACCAGACACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSHCAVP*APDTAP
Trigger: CGGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGCACGAAGATGGCAGTaGCAAAGCGGTACCCCACGA +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLARRWQ*QSGTPR
Trigger: TCGTGGGGTACCGCTTTGTCACTGCCATCTTCGTGC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGCTCCACTCGGGACGGCACGAAGCTTTCTCACCGTaGTATAACCTCCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QAASFPACPEPRLHSGRHEAFSP*YNLPGF
Trigger: AAAGCCAGGGAGGTTATATCACGGTGAGAAAGCTTC...GTGCCGTCCCGAGTGGAGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGCTCGGGCCCGAAGGTaGGCGCGGTCGCCATGTTCG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWARARR*ARSPCS
Trigger: CGAACATGGCGACCGCGCGCACCTTCGGGCCCGAGC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTTTCCCTGCTGCAGCTaGTCCGTGACGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLFPCCS*SVTAYS
Trigger: GCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGAGCGTGGTCAATGCCTaGCAAGTGGGGATGACGGCA +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSVVNA*QVGMTA
Trigger: TGCCGTCATCCCCACTTGGCAGGCATTGACCACGCT...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTGCCGCTCGATGGCCTaGCGGATCAGTGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHCRSMA*RISVLR
Trigger: CCTGAGCACACTGATCCGGCAGGCCATCGAGCGGCA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCGGGATCTCGAAGACTaGGATGCCGAAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLRDLED*DAEVGE
Trigger: CTCACCGACTTCGGCATCGCAGTCTTCGAGATCCCG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAGAGGATGTGCTGGCTaGTGCCCCGAGACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRGCAG*CPETPG
Trigger: ACCAGGAGTCTCGGGGCAGCAGCCAGCACATCCTCT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGGAAGCAGCCCTGGCTaGGCTCCTGGCAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVGSSPG*APGSRQ
Trigger: CTGGCGGCTGCCAGGAGCGCAGCCAGGGCTGCTTCC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCGGCCGTCTGCACCATaGGCTTGTCACTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLRPSAP*ACHCRP
Trigger: TGGTCTACAGTGACAAGCGCATGGTGCAGACGGCCG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTGCGACAGTTGTGGGTaGCACGGTTGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSCDSCG*HGWAWG
Trigger: ACCCCATGCCCAACCGTGGCACCCACAACTGTCGCA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGGTCATTGCTGGCCCTaGGCTCGGCAGGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTGHCWP*ARQAGH
Trigger: ATGGCCAGCCTGCCGAGCGCAGGGCCAGCAATGACC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACAAACATGGTGGGCGGCGTCCTTTCCTaGGTGTCCCGAGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FHGSTGTEMAHLGPTNMVGGVLS*VSRASA
Trigger: AGCCGAGGCTCGGGACACGCAGGAAAGGACGCCGCC...CACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp TTCGGGCTCCAGACAGTAAAGTCACAAGCCCGGCTTCCTGTAACCAGGAGCCAACGACGCGCGCTTCCTTaGCCGGCTCGGCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FGLQTVKSQARLPVTRSQRRALP*PARLPA
Trigger: AGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCG...TTGGCTCCTGGTTACAGGAAGCCGGGCTTGTGACTTTACTGTCTGGAGCCCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTCTTGGCATCCCCACTaGCGCACGTGGGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSWHPH*RTWAFP
Trigger: AGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGATCTTGGCATCCCCACTaGCGCACGTGGGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LFRGQPQGLSDTLRSPRGSWHPH*RTWAFP
Trigger: AGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGA...TCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGAACATCCCTGGGCAATaGGCTGGTGCTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLNIPGQ*AGARES
Trigger: TGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCACGGGGAAGCAGCCCTaGCTGCGCTCCTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVTGKQP*LRSWQP
Trigger: CGGCTGCCAGGAGCGCAGCCAGGGCTGCTTCCCCGT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGATGACGTTGAGGTGCTaGGGCGTGAGCAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLMTLRC*GVSNSQ
Trigger: CTGGCTGTTGCTCACGCCCCAGCACCTCAACGTCAT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCGGTTGCGACAGTTGTaGGTGCCACGGTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRLRQL*VPRLGM
Trigger: CATGCCCAACCGTGGCACCCACAACTGTCGCAACCG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTCTGCTGGGACCTCCTaGGGACGCTGGTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSAGTS*GRWSLL
Trigger: CAGCAATGACCAGCGTCCCCAGGAGGTCCCAGCAGA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGGCCTCGGCTGGGGGTaGGGCTGGAGCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWGLGWG*GWSFHW
Trigger: CCAGTGGAAGCTCCAGCCCCACCCCCAGCCGAGGCC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCGGCGGAGGCCGTCGTaGAGCACAAAGTACACAGCC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHRRRPS*STKYTA
Trigger: GGCTGTGTACTTTGTGCTCCACGACGGCCTCCGCCG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCCACCTGCATCGGGGTaGAACCCGTCAGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSPPASG*NPSAGN
Trigger: ATTTCCGGCTGACGGGTTCCACCCCGATGCAGGTGG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGGTGGCATGCCCACCTaGAAGGCCTGCACGTACAGC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHGGMPT*KACTYS
Trigger: GCTGTACGTGCAGGCCTTCCAGGTGGGCATGCCACC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTCTAGCCGGGCCACCTaGCACCTCCCCAAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSSRAT*HLPKVV
Trigger: GACCACTTTGGGGAGGTGCCAGGTGGCCCGGCTAGA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCAGCAGACACGACACTaGTGTGCACGGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLQQTRH*CARLYH
Trigger: GTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAATCACGCTTGGTGCTaGCAGCTCCAGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSNHAWC*QLQVPC
Trigger: GCAGGGGACCTGGAGCTGCCAGCACCAAGCGTGATT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGAGCAGGAATCACGCTTaGTGCTGGCAGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSRNHA*CWQLQV
Trigger: GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCT...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCACAGCCAGTGCCGCGGTaGTGCCATTTATCTCATAGA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPQPVPR*CHLSHR
Trigger: TCTATGAGATAAATGGCATCACCGCGGCACTGGCTG...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGGGCAGGAGCTGCTCCTaGATGTTGCTGGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLGRSCS*MLLVPK
Trigger: TTTTGGGACCAGCAACATTCAGGAGCAGCTCCTGCC...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTTCCCCAGCTTGGTGTaGAGCCCTTCCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSFPSLV*SPSKEE
Trigger: CTCCTCCTTGGAAGGGCTTCACACCAAGCTGGGGAA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGATCCAGGTTGACCAGTaGGTAGAGCTTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLIQVDQ*VELVQA
Trigger: GGCCTGCACAAGCTCTACTCACTGGTCAACCTGGAT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGATCCAGGTTGACCAGTaGGTAGAGCTTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLIQVDQ*VELVQA
Trigger: GGCCTGCACAAGCTCTACTCACTGGTCAACCTGGAT...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp ATGAGCCAACAGCCCCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACAATCCAGACAGACCTCTaGGGCCCTCTCTCCGAACTG +
Preference number: 4 (lower is better)
Translates to: MSQQPRACSEGSLRACQTIQTDL*GPLSEL
Trigger: CAGTTCGGAGAGAGGGCCTCAGAGGTCTGTCTGGAT...TGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAGGCTCGGGGCTGTTGGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGGATGGCGGCGGACTTaGCGGCCTCAGAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADGWRRT*RPQRAR
Trigger: GCGCGCCCTCTGAGGCCGTCAAGTCCGCCGCCATCC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCCCGCGTCAAGCACGTaGCCACCTGCATCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVPASST*PPASGW
Trigger: CCACCCCGATGCAGGTGGTCACGTGCTTGACGCGGG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGCCTGGGCTAGCCGGTaGGCTCGACAGGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVAWASR*ARQAAH
Trigger: GTGAGCTGCCTGTCGAGCTCACCGGCTAGCCCAGGC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GCTTGTGCTGCCGGTGAGGGAATGGGTCCCATGAGCCAACAGCCCCGAGCCTGTGGCCTTCTAGGGTTGTaGCTTCAGGCTCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: ACAAGEGMGPMSQQPRACGLLGL*LQAPTH
Trigger: ATGAGTGGGAGCCTGAAGGCACAACCCTAGAAGGCC...ACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCAGCGTGGTCAATGCCTaGCAAGTGGGGATGACGGCA +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILSVVNA*QVGMTA
Trigger: TGCCGTCATCCCCACTTGGCAGGCATTGACCACGCT...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGTCAAGCGTGGTCAATaGCTGCCAAGTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLVKRGQ*LPSGDD
Trigger: GTCATCCCCACTTGGCAGGCATTGACCACGCTTGAC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGGGCAGGGAGGCAGATaGGGGAGCCACAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVGQGGR*GSHSGR
Trigger: CCTCCCACTGTGGCTCCCGCATCTGCCTCCCTGCCC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTGGGCAATGGGCTGGTaGTCGGGAGTCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSWAMGW*SGVRLS
Trigger: TGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTTGAGGATGCGGATGTaGTCCAGCAGGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLLRMRM*SSRKSS
Trigger: CGAGGACTTCCTGCTGGAGCACATCCGCATCCTCAA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCGAACTGGCGGATACTaGCCTGCACATGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLRTGGY*PAHGSG
Trigger: TCCTGATCCATGTGCAGGGCAGTATCCGCCAGTTCG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACAGAGGATGTGCTGGCTaGTGCCCCGAGACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHRGCAG*CPETPG
Trigger: ACCAGGAGTCTCGGGGCAGCAGCCAGCACATCCTCT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAAGCGTGTTCTCACTGTaGCGTACCTTGAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPSVFSL*RTLSTR
Trigger: TCTGGTGCTCAAGGTACGGCACAGTGAGAACACGCT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCACAGCATGGCCATGTaGTGGGGTGCAAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLHSMAM*WGAKHE
Trigger: CTCATGCTTTGCACCCCAGCACATGGCCATGCTGTG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCGGCTGAACAGAGTGTaGAGCTGGCCCACTCGATGT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRLNRV*SWPTRC
Trigger: ACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTTGATGACGTTGAGGTaGTGGGGCGTGAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLLMTLR*WGVSNS
Trigger: GCTGTTGCTCACGCCCCAGCACCTCAACGTCATCAA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAGGAGCCCTGGGGGCTaGCTCCCGTCCCGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADRSPGG*LPSRGS
Trigger: AGACCCCCGGGACGGGAGGCAGCCCCCAGGGCTCCT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCGGTACCTGTCTCTCTaGGGCGGCTCTTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRYLSL*GGSLAN
Trigger: GTTTGCCAAAGAGCCGCCGCAGAGAGACAGGTACCG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTGCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCGGTGTGACCTCAGTGTaGTGCTCTGCGTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLGGLLSILHHSRLSLSSGVTSV*CSALGL
Trigger: AAGGCCCAACGCAGAGCAGCACACTGAGGTCACACC...GGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GGACGGCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGTCACTGATCAACAGATaGTGGCAGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GRHTLPSSVGAGPADTLMSLINR*WQKWLC
Trigger: ACACAGCCATTTCTGCCAGCATCTGTTGATCAGTGA...CATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CGGCTTCCTGTAACCAGGAGCCAACCTGCTTGTGCTGCCGGTGAGGGAATGGGTCACCCATCCAGGGCCTaGTCTTCACTGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLPVTRSQPACAAGEGMGHPSRA*SSLAPA
Trigger: AGCAGGAGCCAGTGAAGAGCAGGCCCTGGATGGGTG...ACCCATTCCCTCACCGGCAGCACAAGCAGGTTGGCTCCTGGTTACAGGAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCATGCAGAGTGCCCCTCTaGAGAGTGTCCCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTACRVPL*RVSPGH
Trigger: GTGCCCTGGGGACACTCTGCAGAGGGGCACTCTGCA...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTCTTGGCATCCCCACTaGCGCACGTGGGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSWHPH*RTWAFP
Trigger: AGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCGGCTCAGGTCAAGCGTaGTCAATGCCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSGSGQA*SMPAKW
Trigger: CCACTTGGCAGGCATTGACCACGCTTGACCTGAGCC...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGATCGGAGACGCTGTTGTaGCTCAGGTCAAGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LFRGQPQGLSDTLRSPRGSETLL*LRSSVV
Trigger: GACCACGCTTGACCTGAGCCACAACAGCGTCTCCGA...TCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGGAATCAGAACATCCCTaGGCAATGGGCTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLESEHP*AMGWCS
Trigger: CGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTC...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCTGCCCCGAGACTCCTaGTGCGGGATCTCGAAGACT +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHLPRDS*CGISKT
Trigger: AGTCTTCGAGATCCCGCACCAGGAGTCTCGGGGCAG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGAACAGAGTGTGCAGCTaGCCCACTCGATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLNRVCS*PTRCCL
Trigger: CAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTT...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCAAGGCGCCCCGAGGCTaGGTACAGCTGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVKAPRG*VQLRVG
Trigger: CCCCACACGCAGCTGTACCCAGCCTCGGGGCGCCTT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAAGGCGCCCCGAGGCTaGGTACAGCTGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWKAPRG*VQLRVG
Trigger: CCCCACACGCAGCTGTACCCAGCCTCGGGGCGCCTT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGGCTGGGGGTGGGGCTaGAGCTTCCACTGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWGWGWG*SFHWRL
Trigger: GAGACGCCAGTGGAAGCTCCAGCCCCACCCCCAGCC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCATCAGCAATGCTGCTGTaGAAGAGCTCGATGATGGCG +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPSAMLL*KSSMMA
Trigger: CGCCATCATCGAGCTCTTCCACAGCAGCATTGCTGA...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACGACCATGAGGTGCTaGAGGAAGCAGTGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSTTMRC*RKQCVR
Trigger: CCTGACGCACTGCTTCCTCCAGCACCTCATGGTCGT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGCTCTGCTCTCAGCACTaGGGACAAACACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLLCSQH*GQTPAT
Trigger: AGTGGCAGGTGTTTGTCCCCAGTGCTGAGAGCAGAG...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAGCAGGAATCACGCTTaGTGCTGGCAGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSRNHA*CWQLQV
Trigger: GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTGGGCCTGCTCTTCACTaGCTCCTGCTCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRGPALH*LLLYLP
Trigger: GGGCAGGTAGAGCAGGAGCCAGTGAAGAGCAGGCCC...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGAGCAGACGAATGGGCCTaGTCTTCCATGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LFRGQPQGLSDTLRSPRGADEWA*SSMGPQ
Trigger: CTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGC...TCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCGGCAGGAGCTGCTCCTaGATGTTGCTGGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSGRSCS*MLLVPK
Trigger: TTTTGGGACCAGCAACATTCAGGAGCAGCTCCTGCC...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGAGGCAGGAGCTGCTCCTaGATGTTGCTGGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LFRGQPQGLSDTLRSPRGGRSCS*MLLVPK
Trigger: TTTTGGGACCAGCAACATTCAGGAGCAGCTCCTGCC...TCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTCTTCATCGAGGTTGCTaGGAAGCGGACACTCAGCGT +
Preference number: 4 (lower is better)
Translates to: PPQARLAALQEAASGKLSLHRGC*EADTQR
Trigger: ACGCTGAGTGTCCGCTTCTCAGCAACCTCGATGAAG...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTATCCAGGTTGACCAGTaGGTAGAGCTTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPQARLAALQEAASGKLSIQVDQ*VELVQA
Trigger: GGCCTGCACAAGCTCTACTCACTGGTCAACCTGGAT...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCTCCGGTAGTCGGGGATaGTGCTCAGAGGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILSGSRG*CSEGCS
Trigger: TGAACAACCCTCTGAGCATCATCCCCGACTACCGGA...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCGCCCTCTCTCCGAACTaGGCCAGCACCTTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: ARVLAVVSISPPLPGILSALSPN*ASTLVR
Trigger: CCGGACCAAGGTGCTGGCTCAGTTCGGAGAGAGGGC...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCGATGCCGAAGTCGGTaGGCACAAGGCAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVRCRSR*AQGRRR
Trigger: TCGCCGCCTGCCTTGTGCTCACCGACTTCGGCATCG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTCTTTTGGGCCACAGTaGACGTCAGGTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLSFGPQ*TSGPQS
Trigger: AGATTGGGGACCTGACGTTCACTGTGGCCCAAAAGA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGGGAGACCTCCACTTTaGAGAACAATATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLGRPPL*RTIWGG
Trigger: CCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACATCTCACAGGTGTaGCCTCAGTGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPQARLAALQEAASGKLSHISQV*PQCAAL
Trigger: CAGAGCAGCACACTGAGGTCACACCTGTGAGATGTG...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp TGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACACATCTCACAGGTGTaGCCTCAGTGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WAWSSMGPQGQRWPILAPHISQV*PQCAAL
Trigger: CAGAGCAGCACACTGAGGTCACACCTGTGAGATGTG...TGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGTGAAGTCCAGGATGTaGCCGAGGTCGGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHVKSRM*PRSVLA
Trigger: TGCCAAGACCGACCTCGGGCACATCCTGGACTTCAC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGAGGTCAAGCGTGGTCAATaGCTGCCAAGTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: CSEGSLRACQTPCGLLEEVKRGQ*LPSGDD
Trigger: GTCATCCCCACTTGGCAGGCATTGACCACGCTTGAC...CTCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTGGCGCAGGAACTCCTaGAGGCTGGTGTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWWRRNS*RLVWLP
Trigger: CGGCAGCCACACCAGCCTGCAGGAGTTCCTGCGCCA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGAAGCAGCCCTGGCTaGGCTCCTGGCAGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGSSPG*APGSRQ
Trigger: CTGGCGGCTGCCAGGAGCGCAGCCAGGGCTGCTTCC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGAGGACCACATGAGGTaGCTCAGCTCCTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLEDHMR*LSSSFS
Trigger: TGAAAACGAGGAGCTGAGGCACCTCATGTGGTCCTC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCCCGTCAGCCGGAAATaGTGGTCGAAAAGCCCCACA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHPVSRK*WSKSPT
Trigger: TGTGGGGCTTTTCGACCAGCATTTCCGGCTGACGGG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGCCCACCTGGAAGGCCTaGACGTACAGCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTPTWKA*TYSRML
Trigger: CAGCATCCTGCTGTACGTGCAGGCCTTCCAGGTGGG...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCACCCAGGGGGTGGCATaGCCACCTGGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVTQGVA*PPGRPA
Trigger: TGCAGGCCTTCCAGGTGGGCATGCCACCCCCTGGGT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACAACACAAAAGCCTGCTaGCCTGCCCCAGTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHNTKAC*PAPVGV
Trigger: GACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGCACGCTCATGAGACCTaGTTCACTCACTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLHAHET*FTHSSP
Trigger: CGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTG...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCACTCATCCTCCGATGTTaGAGTTGCAGCCCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPSSVGAGPADTLMRPASLILRC*SCSPCF
Trigger: AAAACACGGGCTGCAACTGCAACATCGGAGGATGAG...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCATGCGGGAGCCACAGTaGGAGGGGAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ARVLAVVSISPPLPGILSMREPQ*EGSCWV
Trigger: GACCCAGCAGCTCCCCTCCCACTGTGGCTCCCGCAT...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGAGTCAGACTGTCAGTaGACGAGAGGCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHESDCQ*TRGCWP
Trigger: TGGCCAGCAGCCTCTCGTCCACTGACAGTCTGACTC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGATACTGCCCTGCACATaGATCAGGAAGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLILPCT*IRKHHS
Trigger: GCTGTGGTGCTTCCTGATCCATGTGCAGGGCAGTAT...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCATCCGCAAAGGAGCCCTaGGGGCTGCCTCCCGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPSAKEP*GLPPVP
Trigger: CGGGACGGGAGGCAGCCCCCAGGGCTCCTTTGCGGA...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGAGGCCTACAGTCATATaGTACCTCCACAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLRPTVI*YLHRLA
Trigger: AGCGAGCCTGTGGAGGTACCATATGACTGTAGGCCT...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCATGCAGCCTGGGGACATaGTGCATCCCCACCCATCCA +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTACSLGT*CIPTHP
Trigger: TGGATGGGTGGGGATGCACCATGTCCCCAGGCTGCA...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
3UTR CAA 72 bp GAGGCCTACAGTCATATGGTACCTCCACAGGCTCGCTaGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: EAYSHMVPPQAR*AALQEAASGKL
Trigger: AAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp TGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACAGCCAGTGCCGCGGTaGTGCCATTTATCTCATAGA +
Preference number: 4 (lower is better)
Translates to: WAWSSMGPQGQRWPILAPQPVPR*CHLSHR
Trigger: TCTATGAGATAAATGGCATCACCGCGGCACTGGCTG...TGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCCTGCCAAGTGGGGATaGCGGCAGTCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ARVLAVVSISPPLPGILSPAKWG*RQSQGL
Trigger: AAGGCCCTGTGACTGCCGTCATCCCCACTTGGCAGG...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CCACAAACATGGTGTTCTGGGGCTGGGTCACCCCACAGAGATGAGGCAGTGATACCTGCCAAGTGGGGATaGCGGCAGTCACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PQTWCSGAGSPHRDEAVIPAKWG*RQSQGL
Trigger: AAGGCCCTGTGACTGCCGTCATCCCCACTTGGCAGG...TATCACTGCCTCATCTCTGTGGGGTGACCCAGCCCCAGAACACCATGTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLTSNPL*LRSRNS
Trigger: TGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLTSNPL*LRSRNS
Trigger: TGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGT...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCCAGGTTTAAGGTCTTaGTGTTCCCCAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLPGLRS*CSPAWC
Trigger: ACACCAAGCTGGGGAACATCAAGACCTTAAACCTGG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACATCCAGGTTGACCAGTaGGTAGAGCTTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHIQVDQ*VELVQA
Trigger: GGCCTGCACAAGCTCTACTCACTGGTCAACCTGGAT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTCCGGTAGTCGGGGATaGTGCTCAGAGGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSGSRG*CSEGCS
Trigger: TGAACAACCCTCTGAGCATCATCCCCGACTACCGGA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCTGATGCAGGGGGCAGCTaGGAGCCGGGAGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PCFGSGEHFTSPSRYLIPDAGGS*EPGVFT
Trigger: GGTGAAGACTCCCGGCTCTCAGCTGCCCCCTGCATC...AGGGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGCCAGGGCCTCCTCCTaGACGAACATGATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTARASS*TNMIPW
Trigger: CCAAGGAATCATGTTCGTTCAGGAGGAGGCCCTGGC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGATGGCGGCGGACTTaGCGGCCTCAGAGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGWRRT*RPQRAR
Trigger: GCGCGCCCTCTGAGGCCGTCAAGTCCGCCGCCATCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCCACCGAGGACCACATaGGGTGCCTCAGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVPPRTT*GASAPR
Trigger: ACGAGGAGCTGAGGCACCTCATGTGGTCCTCGGTGG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCGTACAGCAGGATGCTaGGGGCTGGGGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRTAGC*GLGPSL
Trigger: CAGAGAAGGCCCCAGCCCTCAGCATCCTGCTGTACG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCAGGTCTGGTAGCCCATaGGCACTCGGTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVRSGSP*ALGPGP
Trigger: GGGACCTGGACCGAGTGCTCATGGGCTACCAGACCT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCATCGAAGACGAGGGTaGGGGCCTGCGGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVHRRRG*GPAGRS
Trigger: AGACCTACCCGCAGGCCCTCACCCTCGTCTTCGATG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGAGCCAACAGCGAGATaGGCTTCTCTCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHEPTAR*ASLCSQ
Trigger: CTGAGAGCAGAGAGAAGCTCATCTCGCTGTTGGCTC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCACACCGACAGCCCTaGGGGGCCCGGCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADAHRQP*GARHSH
Trigger: GTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCGGGAGACCTCCACTTTaGAGAACAATATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSGRPPL*RTIWGG
Trigger: CCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCC...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCACCTTTTGCCTTAACTTaGATGCTTCTCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSSVGAGPADTLMRPASPFALT*MLLPSS
Trigger: GGAAGAGGGGAGAAGCATTCAAGTTAAGGCAAAAGG...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GATAGTGGGCAGACGAATGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATCTGTGTCCCTGGCCTTaGGAAGCAGATGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DSGQTNGPGLPWVHRDRDLCPWP*EADAAP
Trigger: GGGAGCTGCATCTGCTTCTCAAGGCCAGGGACACAG...ATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGCCCACTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTGCTCGGGCCCGAAGGTaGGCGCGGTCGCCATGTTCG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIARARR*ARSPCS
Trigger: CGAACATGGCGACCGCGCGCACCTTCGGGCCCGAGC...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGTTTCCCTGCTGCAGCTaGTCCGTGACGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTFPCCS*SVTAYS
Trigger: GCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAA...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGTGGGCTTTCCCTGCTaGAGCTGCTCCGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVVGFPC*SCSVTA
Trigger: TGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCAC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGTGGGCTTTCCCTGCTaGAGCTGCTCCGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWVGFPC*SCSVTA
Trigger: TGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCAC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTGTGAAGTCCAGGATGTaGCCGAGGTCGGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCVKSRM*PRSVLA
Trigger: TGCCAAGACCGACCTCGGGCACATCCTGGACTTCAC...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTAGCGTGGTCAATGCCTaGCAAGTGGGGATGACGGCA +
Preference number: 4 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRSVVNA*QVGMTA
Trigger: TGCCGTCATCCCCACTTGGCAGGCATTGACCACGCT...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGGACTCTCTAGGAGGTTaGCTGCCAGGTTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLDSLGG*LPGLRS
Trigger: AGACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTC...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCACAAACATGGTGTTCTGGGGCTGGGTCACCCCACAGAGATGAGGCAGTGATACCAGACACGGGAGGCTaGCTATGCTCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PQTWCSGAGSPHRDEAVIPDTGG*LCSGPP
Trigger: AGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGG...TATCACTGCCTCATCTCTGTGGGGTGACCCAGCCCCAGAACACCATGTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGGCAGGGAGGCAGATaGGGGAGCCACAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGQGGR*GSHSGR
Trigger: CCTCCCACTGTGGCTCCCGCATCTGCCTCCCTGCCC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTACAGGCTCGCTTGGCTaGGCTACAGGAGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLATGSLG*ATGGSV
Trigger: GACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGT...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TTCGGGCTCCAGACAGTAAAGTCACAAGCCCGGCTTCCTGTAACCAGGAGCCAAACAGGCTCGCTTGGCTaGGCTACAGGAGGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: FGLQTVKSQARLPVTRSQTGSLG*ATGGSV
Trigger: GACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGT...TTGGCTCCTGGTTACAGGAAGCCGGGCTTGTGACTTTACTGTCTGGAGCCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCCCGAGGTCGGTCTTaGCATCCCCACTGGCGCACG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADARGRS*HPHWRT
Trigger: CGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGCTCCTGAATGTTGCTaGTCCCAAAAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLAPECC*SQKVLL
Trigger: CAGAAGGACCTTTTGGGACCAGCAACATTCAGGAGC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GCTTGTGCTGCCGGTGAGGGAATGGGTCCCATGAGCCAACAGCCCCGAGCCTGTGCTCCTGAATGTTGCTaGTCCCAAAAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ACAAGEGMGPMSQQPRACAPECC*SQKVLL
Trigger: CAGAAGGACCTTTTGGGACCAGCAACATTCAGGAGC...ACAGGCTCGGGGCTGTTGGCTCATGGGACCCATTCCCTCACCGGCAGCACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGAGCGGACACTCAGCGTaGCTAAGGTGGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTSGHSA*LRWASM
Trigger: CATCGAAGCCCACCTTAGCCACGCTGAGTGTCCGCT...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAATGCGGGAGCCACAGTaGGAGGGGAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEMREPQ*EGSCWV
Trigger: GACCCAGCAGCTCCCCTCCCACTGTGGCTCCCGCAT...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCCCTGGGCAATGGGCTaGTGCTCGGGAGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWPWAMG*CSGVRL
Trigger: CAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGAACATCCCTGGGCAATaGGCTGGTGCTCGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTNIPGQ*AGARES
Trigger: TGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTT...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGAATCAGAACATCCCTaGGCAATGGGCTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHESEHP*AMGWCS
Trigger: CGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCTCCTCCTCCACGTCTaGGGGCCCCATTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHLLLHV*GPHFKV
Trigger: TACTTTGAAATGGGGCCCCCAGACGTGGAGGAGGAG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAGGCAGGCGGCGAACTaGCGGATACTGCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRQAAN*RILPCT
Trigger: TGTGCAGGGCAGTATCCGCCAGTTCGCCGCCTGCCT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGGCTGGGGGTGGGGCTaGAGCTTCCACTGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADGWGWG*SFHWRL
Trigger: GAGACGCCAGTGGAAGCTCCAGCCCCACCCCCAGCC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGGTGGCATGCCCACCTaGAAGGCCTGCACGTACAGC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWGGMPT*KACTYS
Trigger: GCTGTACGTGCAGGCCTTCCAGGTGGGCATGCCACC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTCTAGCCGGGCCACCTaGCACCTCCCCAAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWSSRAT*HLPKVV
Trigger: GACCACTTTGGGGAGGTGCCAGGTGGCCCGGCTAGA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCAAATGGGCAATCATCCTaGCACCTAACCCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: WAWSSMGPQGQRWPILAPNGQSS*HLTPSL
Trigger: GAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATT...TGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTCTCCACAGGCTCGCTTaGCTGCGCTACAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLALHRLA*LRYRRQ
Trigger: CTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAG...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTGGGCCTGGTCTTCCATaGGTCCACAGGGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCGPGLP*VHRDRD
Trigger: ATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCC...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGCCCGGAGATCCAGGTTaGCCAGTGAGTAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTPGDPG*PVSRAC
Trigger: ACAAGCTCTACTCACTGGTCAACCTGGATCTCCGGG...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCACCCGGAGATCCAGGTTaGCCAGTGAGTAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTAPGDPG*PVSRAC
Trigger: ACAAGCTCTACTCACTGGTCAACCTGGATCTCCGGG...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCCCTCTCTCCGAACTaGGCCAGCACCTTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADALSPN*ASTLVR
Trigger: CCGGACCAAGGTGCTGGCTCAGTTCGGAGAGAGGGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGATGCAGGGGGCAGCTaGGAGCCGGGAGTCTTCACC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADDAGGS*EPGVFT
Trigger: GGTGAAGACTCCCGGCTCTCAGCTGCCCCCTGCATC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCATGTGGAAGAGCTCGATaGTGGCGCTGCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPCGRAR*WRCPAG
Trigger: GCCTGCGGGGCAGCGCCATCATCGAGCTCTTCCACA...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAAGCCCCACATTGACTaGCTGCAGGTCACTAAGCTT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSKPHID*LQVTKL
Trigger: AAGCTTAGTGACCTGCAGTCAGTCAATGTGGGGCTT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAATGCTGGGAGGGCTGCTaGGCATTCTGCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQECWEGC*AFCTTA
Trigger: GGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCA...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTTGCTTGTGCTGCCGGTaGGGGAATGGGTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLACLCCR*GNGSHE
Trigger: CTCATGGGACCCATTCCCTCACCGGCAGCACAAGCA...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGTGACGGCATACAGCTaGAGGGGTCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTVTAYS*RGPMAK
Trigger: CTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCAC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAGTGGGCTTTCCCTGCTaGAGCTGCTCCGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEVGFPC*SCSVTA
Trigger: TGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCAC...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTGGCCTTCTAGGGTTGTaGCTTCAGGCTCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCGLLGL*LQAPTH
Trigger: ATGAGTGGGAGCCTGAAGGCACAACCCTAGAAGGCC...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTGTCAAGCGTGGTCAATaGCTGCCAAGTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCVKRGQ*LPSGDD
Trigger: GTCATCCCCACTTGGCAGGCATTGACCACGCTTGAC...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CTGCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCGACTCTCTAGGAGGTTaGCTGCCAGGTTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLGGLLSILHHSRLSLSSDSLGG*LPGLRS
Trigger: AGACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTC...GGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCGACTCTCTAGGAGGTTaGCTGCCAGGTTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILDSLGG*LPGLRS
Trigger: AGACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTC...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWTGGCL*SGPPPS
Trigger: AGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLATGGCL*SGPPPS
Trigger: AGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGT...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTATCCAGGCAGGCAGCTaGCGCTCGATGGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIIQAGS*RSMACR
Trigger: CCGGCAGGCCATCGAGCGGCAGCTGCCTGCCTGGAT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGTGGCGGATACTGCCCTaGACATGGATCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTWRILP*TWIRKH
Trigger: GTGCTTCCTGATCCATGTGCAGGGCAGTATCCGCCA...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCATGGCGCAGGAACTCCTaGAGGCTGGTGTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPWRRNS*RLVWLP
Trigger: CGGCAGCCACACCAGCCTGCAGGAGTTCCTGCGCCA...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGTCATTGCTGGCCCTaGGCTCGGCAGGCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGHCWP*ARQAGH
Trigger: ATGGCCAGCCTGCCGAGCGCAGGGCCAGCAATGACC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCCCACCTGGAAGGCCTaGACGTACAGCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVPTWKA*TYSRML
Trigger: CAGCATCCTGCTGTACGTGCAGGCCTTCCAGGTGGG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCTGGGGACAAACACCTaGCACTGGACTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWLGTNT*HWTSRP
Trigger: GGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAAAAGCCTGCTGCCCTaGCCCAGTAGGCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWKSLLP*PSRRQA
Trigger: AGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGGGATTAGCAGCAAGATaGCAACAGCAACAGCAACAG +
Preference number: 4 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLGLAAR*QQQQQQ
Trigger: CTGTTGCTGTTGCTGTTGGCATCTTGCTGCTAATCC...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGCCTCACACCAAGTTCTaGGTCTCCAGGAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLPHTKF*VSRSPG
Trigger: GCCCGGGCTCCTGGAGACGCAGAACTTGGTGTGAGG...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACCCCACTGGCGCACGTaGGCTTTCCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPPHWRT*AFPAAA
Trigger: AGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTGCTCCTGAATGTTGCTaGTCCCAAAAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPQARLAALQEAASGKLSAPECC*SQKVLL
Trigger: CAGAAGGACCTTTTGGGACCAGCAACATTCAGGAGC...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGACGAACATGATTCCTTaGTTAGAGAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLTNMIP*LERMGW
Trigger: CCAGCCCATCCTCTCTAACCAAGGAATCATGTTCGT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCAGCTGCCGCTCGATaGCCTGCCGGATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADAAAAR*PAGSVC
Trigger: GCACACTGATCCGGCAGGCCATCGAGCGGCAGCTGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACCTCCTCCCGCTGGTTaGCAGCCTCGATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPPPPAG*QPRSRQ
Trigger: CTGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGGCCCTCCTCCCGCTaGTTGGCAGCCTCGATCCAG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADWPSSR*LAASIQ
Trigger: CTGGATCGAGGCTGCCAACCAGCGGGAGGAGGGCCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGCTCCTCCTCCACGTCTaGGGGCCCCATTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTLLLHV*GPHFKV
Trigger: TACTTTGAAATGGGGCCCCCAGACGTGGAGGAGGAG...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGAGCGCAGGTCCGCGTaGAACTCGTGCAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPERRSA*NSCRLA
Trigger: CGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTGCAGGGGCTGGAGCTaGGACTTCCGCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSACRGWS*DFRWGR
Trigger: CCGGCCCCAGCGGAAGTCCCAGCTCCAGCCCCTGCA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGCAAAGTACACAGCCTTaGTGGAGAGCAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTQSTQP*WRAARR
Trigger: CCTGCGTGCTGCTCTCCACCAAGGCTGTGTACTTTG...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGGCTGGGGCCTTCTCTaGCTCAGCCATCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVGWGLL*LSHLLG
Trigger: GCCCAAAAGATGGCTGAGCCAGAGAAGGCCCCAGCC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAACGACAGGCTGGCTGTaGCCTGGGCTAGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPTTGWL*PGLAGE
Trigger: CTCACCGGCTAGCCCAGGCCACAGCCAGCCTGTCGT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCAATCACGCTTGGTGCTaGCAGCTCCAGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVNHAWC*QLQVPC
Trigger: GCAGGGGACCTGGAGCTGCCAGCACCAAGCGTGATT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGATGTGCTGCTCTGCGTTaGGCCTTTTGCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: LFRGQPQGLSDTLRSPRGCAALR*AFCLNL
Trigger: CAAGTTAAGGCAAAAGGCCCAACGCAGAGCAGCACA...TCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAACTCCACAGGCTCGCTTaGCTGCGCTACAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQELHRLA*LRYRRQ
Trigger: CTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAG...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCTGGGCCTGCTCTTCACTaGCTCCTGCTCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCFGSGEHFTSPSRYLIPGPALH*LLLYLP
Trigger: GGGCAGGTAGAGCAGGAGCCAGTGAAGAGCAGGCCC...AGGGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTACAAACATGGTGTTCTaGGGCTGGGTCACCCCACAG +
Preference number: 4 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRTNMVF*GWVTPQ
Trigger: CTGTGGGGTGACCCAGCCCCAGAACACCATGTTTGT...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp TGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGAGAGAGATGGCCCATCTTaGCCCCACAAACATGGTGTT +
Preference number: 4 (lower is better)
Translates to: CSEGSLRACQTPCGLLEERDGPS*PHKHGV
Trigger: AACACCATGTTTGTGGGGCCAAGATGGGCCATCTCT...CTCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCACAGCCAGTGCCGCGGTaGTGCCATTTATCTCATAGA +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTAQPVPR*CHLSHR
Trigger: TCTATGAGATAAATGGCATCACCGCGGCACTGGCTG...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTTCCCCAGCTTGGTGTaGAGCCCTTCCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWFPSLV*SPSKEE
Trigger: CTCCTCCTTGGAAGGGCTTCACACCAAGCTGGGGAA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GATAGTGGGCAGACGAATGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATTCCGGTAGTCGGGGATaGTGCTCAGAGGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: DSGQTNGPGLPWVHRDRDSGSRG*CSEGCS
Trigger: TGAACAACCCTCTGAGCATCATCCCCGACTACCGGA...ATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGCCCACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTATCCAGACAGACCTCTaGGGCCCTCTCTCCGAACTG +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLAIQTDL*GPLSEL
Trigger: CAGTTCGGAGAGAGGGCCTCAGAGGTCTGTCTGGAT...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACCTCCTTGGCTTTCTaGATTGCTTTCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSTSLAF*IAFSTS
Trigger: GGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTGCTCAGTTTGGACTTaGCCTCCTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSCSVWT*PPWLSE
Trigger: TTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCACTCGATGTTGCCTaGGTAGTCCCCGGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPLDVA*VVPGGR
Trigger: ACGGCCGCCGGGGACTACTCAGGCAACATCGAGTGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGAGCGCCGCACGGCTaGACAGAGTGTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGAPHG*TECAAG
Trigger: GCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGCCTGGGCTAGCCGGTaGGCTCGACAGGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAAWASR*ARQAAH
Trigger: GTGAGCTGCCTGTCGAGCTCACCGGCTAGCCCAGGC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CTGCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCGAAGCTTTCTCACCGTaGTATAACCTCCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLGGLLSILHHSRLSLSSEAFSP*YNLPGF
Trigger: AAAGCCAGGGAGGTTATATCACGGTGAGAAAGCTTC...GGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGAGCTCTTCAGCCAGTaGCGCGGTGATGCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTELFSQ*RGDAIY
Trigger: ATAAATGGCATCACCGCGGCACTGGCTGAAGAGCTC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGTGAAGTCCAGGATGTaGCCGAGGTCGGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVVKSRM*PRSVLA
Trigger: TGCCAAGACCGACCTCGGGCACATCCTGGACTTCAC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCTACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PCFGSGEHFTSPSRYLIPTGGCL*SGPPPS
Trigger: AGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGT...AGGGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGCCAGACACGGGAGGCTaGCTATGCTCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGPDTGG*LCSGPP
Trigger: AGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGG...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACCAGACACGGGAGGCTaGCTATGCTCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPPDTGG*LCSGPP
Trigger: AGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCTTCAGCAGAGACACGTaGTCCAGACACGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVFSRDT*SRHGRL
Trigger: CAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAA...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAAGGGAGGAGAGGATGTaGTGGCTGCTGCCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPREERM*WLLPRD
Trigger: GTCTCGGGGCAGCAGCCAGCACATCCTCTCCTCCCT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCGGCCGTCTGCACCATaGGCTTGTCACTGTAGACCA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRPSAP*ACHCRP
Trigger: TGGTCTACAGTGACAAGCGCATGGTGCAGACGGCCG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCCCCGGCGGCCGTCTaGACCATGCGCTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCISPAAV*TMRLSL
Trigger: CAGTGACAAGCGCATGGTGCAGACGGCCGCCGGGGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCGGCTGAACAGAGTGTaGAGCTGGCCCACTCGATGT +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRLNRV*SWPTRC
Trigger: ACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACAGTCTTCAGGTCCTaGAGCGAGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADTVFRS*SEARSW
Trigger: CCAGCTGCGGGCCTCGCTGCAGGACCTGAAGACTGT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTACCCAGGGGGTGGCATaGCCACCTGGAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCITQGVA*PPGRPA
Trigger: TGCAGGCCTTCCAGGTGGGCATGCCACCCCCTGGGT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCGGTACCTGTCTCTCTaGGGCGGCTCTTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVRYLSL*GGSLAN
Trigger: GTTTGCCAAAGAGCCGCCGCAGAGAGACAGGTACCG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGAGAACACAAAAGCCTaGTGCCCTGCCCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWENTKA*CPAPVG
Trigger: GCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGACACGACACTGGTGTaGACGGCTGTACCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVDTTLV*TAVPPV
Trigger: CACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTCACGCTCATGAGACCTaGTTCACTCACTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCHAHET*FTHSSP
Trigger: CGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTG...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCACTCCGATGTTGCAGTTaGAGCCCGTGTTTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTALRCCS*SPCFGS
Trigger: ACTGCCAAAACACGGGCTGCAACTGCAACATCGGAG...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTCTCAGTGTGCTGCTCTaGGTTGGGCCTTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCLSVLL*VGPFAL
Trigger: TAAGGCAAAAGGCCCAACGCAGAGCAGCACACTGAG...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAGCCTGTCAGACACCCTaGGGTCTCCTAGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEACQTP*GLLEEL
Trigger: CAGCTCCTCTAGGAGACCGCAGGGTGTCTGACAGGC...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACGCTCCTGAATGTTGCTaGTCCCAAAAGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHAPECC*SQKVLL
Trigger: CAGAAGGACCTTTTGGGACCAGCAACATTCAGGAGC...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGGCTCAGGTCAAGCGTaGTCAATGCCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWGSGQA*SMPAKW
Trigger: CCACTTGGCAGGCATTGACCACGCTTGACCTGAGCC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCGGCTCAGGTCAAGCGTaGTCAATGCCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ARVLAVVSISPPLPGILSGSGQA*SMPAKW
Trigger: CCACTTGGCAGGCATTGACCACGCTTGACCTGAGCC...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGGACGAGAGGCTGCTaGCCAGGGCCTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADWTRGC*PGPPPE
Trigger: TTCAGGAGGAGGCCCTGGCCAGCAGCCTCTCGTCCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGAGTCAGACTGTCAGTaGACGAGAGGCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWESDCQ*TRGCWP
Trigger: TGGCCAGCAGCCTCTCGTCCACTGACAGTCTGACTC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTGGGGCTACACAGCATaGCCATGTGCTGGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWWGYTA*PCAGVQ
Trigger: TTGCACCCCAGCACATGGCCATGCTGTGTAGCCCCA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCATGACGTTGAGGTGCTaGGGCGTGAGCAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVMTLRC*GVSNSQ
Trigger: CTGGCTGTTGCTCACGCCCCAGCACCTCAACGTCAT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGAAGTGGAACTTCTCGTaGGGCAGCACGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTKWNFS*GSTKMA
Trigger: TGCCATCTTCGTGCTGCCCCACGAGAAGTTCCACTT...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGTCAGCAATGCTGCTGTaGAAGAGCTCGATGATGGCG +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTSAMLL*KSSMMA
Trigger: CGCCATCATCGAGCTCTTCCACAGCAGCATTGCTGA...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAGTCACCTCCAGCCCTaGGGTCTGGTAGAACACCAC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWSHLQP*GLVEHH
Trigger: GTGGTGTTCTACCAGACCCCAGGGCTGGAGGTGACT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCAGTACACAGCCTTGGTaGAGAGCAGCACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVSTQPW*RAARRQ
Trigger: CTGCCTGCGTGCTGCTCTCCACCAAGGCTGTGTACT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAGTACACAGCCTTGGTaGAGAGCAGCACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWSTQPW*RAARRQ
Trigger: CTGCCTGCGTGCTGCTCTCCACCAAGGCTGTGTACT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCAGGATGCTGAGGGCTaGGGCCTTCTCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADQDAEG*GLLWLS
Trigger: GCTGAGCCAGAGAAGGCCCCAGCCCTCAGCATCCTG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGGCACCTCCCCAAAGTaGTCCAGGGTGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADGTSPK*SRVTLP
Trigger: GGGCAGTGTCACCCTGGACCACTTTGGGGAGGTGCC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTACGACAGGCTGGCTGTaGCCTGGGCTAGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCITTGWL*PGLAGE
Trigger: CTCACCGGCTAGCCCAGGCCACAGCCAGCCTGTCGT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAAAGAACAATATGGGGTaGGAGCTTCCAATGTGCATT +
Preference number: 4 (lower is better)
Translates to: WEADSTPTALRGPAFSLPKNNMG*ELPMCI
Trigger: AATGCACATTGGAAGCTCCCACCCCATATTGTTCTT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCAGGCCTACAGTCATATaGTACCTCCACAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSRPTVI*YLHRLA
Trigger: AGCGAGCCTGTGGAGGTACCATATGACTGTAGGCCT...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCTCCAGAAGTCCAGCGATaGCGGGGACAGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PCFGSGEHFTSPSRYLIPPEVQR*RGQTAE
Trigger: CTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGG...AGGGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CTGCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCCATACACGATTACCTTaGTTAGAGAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGGLLSILHHSRLSLSSHTRLP*LERMGW
Trigger: CCAGCCCATCCTCTCTAACCAAGGTAATCGTGTATG...GGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGCTGCAGCTGCTCCGTaGCGGCATACAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAAAAAP*RHTAAG
Trigger: CCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCTTCATCGAGGTTGCTaGGAAGCGGACACTCAGCGT +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWLHRGC*EADTQR
Trigger: ACGCTGAGTGTCCGCTTCTCAGCAACCTCGATGAAG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCCAGGTTTAAGGTCTTaGTGTTCCCCAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRPGLRS*CSPAWC
Trigger: ACACCAAGCTGGGGAACATCAAGACCTTAAACCTGG...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTCCCGGAGATCCAGGTTaGCCAGTGAGTAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLAPGDPG*PVSRAC
Trigger: ACAAGCTCTACTCACTGGTCAACCTGGATCTCCGGG...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CGGCTTCCTGTAACCAGGAGCCAACCTGCTTGTGCTGCCGGTGAGGGAATGGGTTGCTCAGTTTGGACTTaGCCTCCTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RLPVTRSQPACAAGEGMGCSVWT*PPWLSE
Trigger: TTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCA...ACCCATTCCCTCACCGGCAGCACAAGCAGGTTGGCTCCTGGTTACAGGAAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGCTCAGGCGCTGGATaGAGTCCTGATTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADCSGAG*SPDWWP
Trigger: CGGCCACCAATCAGGACTTCATCCAGCGCCTGAGCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAAGTGCGAGGGGATCTaGTTCTCCTCCGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADKCEGI*FSSEVA
Trigger: GGCCACCTCGGAGGAGAATCAGATCCCCTCGCACTT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCGTACAGCAGGATGCTaGGGGCTGGGGCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRTAGC*GLGPSL
Trigger: CAGAGAAGGCCCCAGCCCTCAGCATCCTGCTGTACG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAAGATCTCGGAGCTGGTaGGCAGGAGTGTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPRSRSW*AGVSWG
Trigger: GCCCCAAGACACTCCTGCTCACCAGCTCCGAGATCT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTCAGCAGACACGCTCATaGGACCTGCTTCACTCACTC +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLAQQTRS*DLLHSL
Trigger: GAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTG...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp TTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACAAACATGGTGGCCTGGGTTCAGAGGTaGAAGCCCTTTGAAAACGCT +
Preference number: 4 (lower is better)
Translates to: FHGSTGTEMAHLGPTNMVAWVQR*KPFENA
Trigger: AGCGTTTTCAAAGGGCTTTCACCTCTGAACCCAGGC...CACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGTGACGGCATACAGCTaGAGGGGTCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWVTAYS*RGPMAK
Trigger: CTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCAC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAGTGACGGCATACAGCTaGAGGGGTCCAATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EAKWAIILAPNPIAPRSGVTAYS*RGPMAK
Trigger: CTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCAC...TCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAATTTCCCTGCTGCAGCTaGTCCGTGACGGCATACAGC +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEFPCCS*SVTAYS
Trigger: GCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAA...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAGTGAAGTCCAGGATGTaGCCGAGGTCGGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEVKSRM*PRSVLA
Trigger: TGCCAAGACCGACCTCGGGCACATCCTGGACTTCAC...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGCTGCTCCTGAATGTTaGTGGTCCCAAAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTAAAPEC*WSQKVL
Trigger: AAGGACCTTTTGGGACCAGCAACATTCAGGAGCAGC...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGTCAAGCGTGGTCAATaGCTGCCAAGTGGGGATGAC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVVKRGQ*LPSGDD
Trigger: GTCATCCCCACTTGGCAGGCATTGACCACGCTTGAC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCAACAAGGTTATACAGGTaGTGCAGATTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: WAWSSMGPQGQRWPILAPTRLYR*CRLSTT
Trigger: GGTTGTGGACAATCTGCAGCACCTGTATAACCTTGT...TGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGACTCTCTAGGAGGTTaGCTGCCAGGTTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTDSLGG*LPGLRS
Trigger: AGACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPTGGCL*SGPPPS
Trigger: AGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGTTCAGCAGAGACACGTaGTCCAGACACGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLFSRDT*SRHGRL
Trigger: CAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAA...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTTGAGGATGCGGATGTaGTCCAGCAGGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWLRMRM*SSRKSS
Trigger: CGAGGACTTCCTGCTGGAGCACATCCGCATCCTCAA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCCCGAGACTCCTGGTaGGGGATCTCGAAGACTGCG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPRDSW*GISKTA
Trigger: CGCAGTCTTCGAGATCCCGCACCAGGAGTCTCGGGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGATGTGCTGGCTGCTaGCCCGAGACTCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGCAGC*PETPGA
Trigger: CGCACCAGGAGTCTCGGGGCAGCAGCCAGCACATCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTGGCCCACTCGATGTTaGCTGAGTAGTCCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIWPTRC*LSSPRR
Trigger: CCGCCGGGGACTACTCAGGCAACATCGAGTGGGCCA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGCTCCGGCGAGGGCGTaGGTTCCAGAGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAAPARA*VPERTA
Trigger: TGCTGTCCTCTCTGGAACGCACGCCCTCGCCGGAGC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGTGGGAGCTTCCAATGTaGATTCTGCTACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTWELPM*ILLPAS
Trigger: TGAGGCTGGTAGCAGAATGCACATTGGAAGCTCCCA...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGGGCTCCTGCTCTACCTaGCCACTCACTCACTCACTG +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLGSCST*PLTHSL
Trigger: CAGTGAGTGAGTGAGTGGGCAGGTAGAGCAGGAGCC...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp TTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACAAACATGGTGAAGCAAGCTTTTCCCTaGACAGGGATTCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FHGSTGTEMAHLGPTNMVKQAFP*TGIRAP
Trigger: TGGAGCCCGAATCCCTGTGCAGGGAAAAGCTTGCTT...CACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGTCTTGGCATCCCCACTaGCGCACGTGGGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGSWHPH*RTWAFP
Trigger: AGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGA...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCCTGGGCAATGGGCTaGTGCTCGGGAGTCAGACTG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPWAMG*CSGVRL
Trigger: CAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCCTGTCCCGCAGGGATaGACTCCAAGGAATCAGAAC +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVPVPQG*TPRNQN
Trigger: GTTCTGATTCCTTGGAGTCCATCCCTGCGGGACAGG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACGGCTCGGCATGTTCTaGGCTTGCACCACCAACAGC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPRLGMF*ACTTNS
Trigger: GCTGTTGGTGGTGCAAGCCCAGAACATGCCGAGCCG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCGGCTCGGCATGTTCTaGGCTTGCACCACCAACAGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADRLGMF*ACTTNS
Trigger: GCTGTTGGTGGTGCAAGCCCAGAACATGCCGAGCCG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGCAGCTGCCGCTCGATaGCCTGCCGGATCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAAAAAR*PAGSVC
Trigger: GCACACTGATCCGGCAGGCCATCGAGCGGCAGCTGC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTGGCCCTCCTCCCGCTaGTTGGCAGCCTCGATCCAG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAWPSSR*LAASIQ
Trigger: CTGGATCGAGGCTGCCAACCAGCGGGAGGAGGGCCA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAGGCAGGCGGCGAACTaGCGGATACTGCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRQAAN*RILPCT
Trigger: TGTGCAGGGCAGTATCCGCCAGTTCGCCGCCTGCCT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGAGCGCAGGTCCGCGTaGAACTCGTGCAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAERRSA*NSCRLA
Trigger: CGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGCTGCCGTAGAGGATaGGGCTACACAGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGCRRG*GYTAWP
Trigger: TGGCCATGCTGTGTAGCCCCATCCTCTACGGCAGCC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCGGTTGCGACAGTTGTaGGTGCCACGGTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADRLRQL*VPRLGM
Trigger: CATGCCCAACCGTGGCACCCACAACTGTCGCAACCG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGACGCTGGTCATTGCTaGCCCTGCGCTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSADAGHC*PCARQA
Trigger: AGCCTGCCGAGCGCAGGGCCAGCAATGACCAGCGTC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCCTCCGAGGTGGCCTaGATGAGGTGCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCISSEVA*MRCSLG
Trigger: CCCGAGTGAGCACCTCATCCAGGCCACCTCGGAGGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCGGCGGAGGCCGTCGTaGAGCACAAAGTACACAGCC +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRRRPS*STKYTA
Trigger: GGCTGTGTACTTTGTGCTCCACGACGGCCTCCGCCG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACCACCTGCATCGGGGTaGAACCCGTCAGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPPPASG*NPSAGN
Trigger: ATTTCCGGCTGACGGGTTCCACCCCGATGCAGGTGG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGGCTGGGGCCTTCTCTaGCTCAGCCATCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADGWGLL*LSHLLG
Trigger: GCCCAAAAGATGGCTGAGCCAGAGAAGGCCCCAGCC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTGGACTTCACGGCCCTaGCTGGCTCTAGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAWTSRP*LALAGP
Trigger: TGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAACTTCATCGAGGTTGCTaGGAAGCGGACACTCAGCGT +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQELHRGC*EADTQR
Trigger: ACGCTGAGTGTCCGCTTCTCAGCAACCTCGATGAAG...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACATCCAGACAGACCTCTaGGGCCCTCTCTCCGAACTG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADIQTDL*GPLSEL
Trigger: CAGTTCGGAGAGAGGGCCTCAGAGGTCTGTCTGGAT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCCAGGGCCTCCTCCTaGACGAACATGATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADARASS*TNMIPW
Trigger: CCAAGGAATCATGTTCGTTCAGGAGGAGGCCCTGGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTGCTCAGGCGCTGGATaGAGTCCTGATTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCICSGAG*SPDWWP
Trigger: CGGCCACCAATCAGGACTTCATCCAGCGCCTGAGCA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAGCACCACAGCACCTTaGGGATGCGGATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADSTTAP*GCGCAP
Trigger: TGGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCACGAAGATGGCAGTaGCAAAGCGGTACCCCACGA +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADARRWQ*QSGTPR
Trigger: TCGTGGGGTACCGCTTTGTCACTGCCATCTTCGTGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCCGAGGTGGCCTGGATaGGGTGCTCACTCGGGTACT +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAPRWPG*GAHSGT
Trigger: AGTACCCGAGTGAGCACCTCATCCAGGCCACCTCGG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAAGTGCGAGGGGATCTaGTTCTCCTCCGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIKCEGI*FSSEVA
Trigger: GGCCACCTCGGAGGAGAATCAGATCCCCTCGCACTT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTATCCTGCAGTGGCTCTaGGAAGTAGCGGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAILQWL*EVAAEA
Trigger: GGCCTCCGCCGCTACTTCTCAGAGCCACTGCAGGAT...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAGGACAGCACGACCATaGGGTGCTGGAGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADRTARP*GAGGSS
Trigger: ACTGCTTCCTCCAGCACCTCATGGTCGTGCTGTCCT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGAGCTTAAAACATCGGGTTaGACTGTTTTCCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: CSEGSLRACQTPCGLLEELKTSG*TVFPRP
Trigger: AGGTCTTGGGAAAACAGTTCAACCCGATGTTTTAAG...CTCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTCCTTTTGCCTTAACTTaGATGCTTCTCCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCPFALT*MLLPSS
Trigger: GGAAGAGGGGAGAAGCATTCAAGTTAAGGCAAAAGG...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGATCAATCTTTCTCTCTaGAACGAGCTTTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLINLSL*NELFMQ
Trigger: CTGCATGAAAAGCTCGTTGCAGAGAGAAAGATTGAT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGAGCTCTTCAGCCAGTaGCGCGGTGATGCCATTTAT +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVELFSQ*RGDAIY
Trigger: ATAAATGGCATCACCGCGGCACTGGCTGAAGAGCTC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCAGCGTGTTCTCACTGTaGCGTACCTTGAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVSVFSL*RTLSTR
Trigger: TCTGGTGCTCAAGGTACGGCACAGTGAGAACACGCT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTGCGACAGTTGTGGGTaGCACGGTTGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCICDSCG*HGWAWG
Trigger: ACCCCATGCCCAACCGTGGCACCCACAACTGTCGCA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTACAGTCTTCAGGTCCTaGAGCGAGGCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSATVFRS*SEARSW
Trigger: CCAGCTGCGGGCCTCGCTGCAGGACCTGAAGACTGT...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTGTGGCCTGGATGAGGTaGTCACTCGGGTACTGGGCA +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIVAWMR*SLGYWA
Trigger: TGCCCAGTACCCGAGTGAGCACCTCATCCAGGCCAC...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGAGGACCACATGAGGTaGCTCAGCTCCTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWEDHMR*LSSSFS
Trigger: TGAAAACGAGGAGCTGAGGCACCTCATGTGGTCCTC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAAGCACGTGACCACCTaGATCGGGGTGGAACCCGTC +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIKHVTT*IGVEPV
Trigger: GACGGGTTCCACCCCGATGCAGGTGGTCACGTGCTT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAAGCACGACCATGAGGTaGTGGAGGAAGCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPSTTMR*WRKQCV
Trigger: GACGCACTGCTTCCTCCAGCACCTCATGGTCGTGCT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAGCACGACCATGAGGTaGTGGAGGAAGCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADSTTMR*WRKQCV
Trigger: GACGCACTGCTTCCTCCAGCACCTCATGGTCGTGCT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAAAAGCCTGCTGCCCTaGCCCAGTAGGCGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIKSLLP*PSRRQA
Trigger: AGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCATGTTCACATTCTCTaGGAGGACAGTCAAATTAAG +
Preference number: 4 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLHVHIL*EDSQIK
Trigger: CTTAATTTGACTGTCCTCGCAGAGAATGTGAACATG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGACACGACACTGGTGTaGACGGCTGTACCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPDTTLV*TAVPPV
Trigger: CACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGGTTTTATTTAAGAGGTaGAAATCTGGAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLVLFKR*KSGGHV
Trigger: GACATGGCCTCCAGATTTGCACCTCTTAAATAAAAC...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCTGCAGGGGTCCAATaGCAAAGACCTCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPAAGVQ*QRPRRP
Trigger: GGGCCGGCGAGGTCTTTGCCATTGGACCCCTGCAGC...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCAGCGTGGCTAAGGTaGGCTTCGATGCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCISAWLR*ASMRPA
Trigger: GGCTGGTCGCATCGAAGCCCACCTTAGCCACGCTGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAAGCGGACACTCAGCGTaGCTAAGGTGGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPSGHSA*LRWASM
Trigger: CATCGAAGCCCACCTTAGCCACGCTGAGTGTCCGCT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGAGCGGACACTCAGCGTaGCTAAGGTGGGCTTCGATG +
Preference number: 4 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGSGHSA*LRWASM
Trigger: CATCGAAGCCCACCTTAGCCACGCTGAGTGTCCGCT...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTCGGAGACGCTGTTGTaGCTCAGGTCAAGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADSETLL*LRSSVV
Trigger: GACCACGCTTGACCTGAGCCACAACAGCGTCTCCGA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTGGACGAGAGGCTGCTaGCCAGGGCCTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAWTRGC*PGPPPE
Trigger: TTCAGGAGGAGGCCCTGGCCAGCAGCCTCTCGTCCA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGCAGGAAGATGATCTaGCCAGACCCCGGCACCACC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGRKMI*PDPGTT
Trigger: GGTGGTGCCGGGGTCTGGCCAGATCATCTTCCTGCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAGCATGGCCATGTGCTaGGGTGCAAAGCATGAGCGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADSMAMC*GAKHER
Trigger: GCGCTCATGCTTTGCACCCCAGCACATGGCCATGCT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAAGCATGGCCATGTGCTaGGGTGCAAAGCATGAGCGC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPSMAMC*GAKHER
Trigger: GCGCTCATGCTTTGCACCCCAGCACATGGCCATGCT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGGGGCTACACAGCATaGCCATGTGCTGGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADWGYTA*PCAGVQ
Trigger: TTGCACCCCAGCACATGGCCATGCTGTGTAGCCCCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCAAGTGGAACTTCTCGTaGGGCAGCACGAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVKWNFS*GSTKMA
Trigger: TGCCATCTTCGTGCTGCCCCACGAGAAGTTCCACTT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCTGCTGGGACCTCCTaGGGACGCTGGTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCISAGTS*GRWSLL
Trigger: CAGCAATGACCAGCGTCCCCAGGAGGTCCCAGCAGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAGTCACCTCCAGCCCTaGGGTCTGGTAGAACACCAC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADSHLQP*GLVEHH
Trigger: GTGGTGTTCTACCAGACCCCAGGGCTGGAGGTGACT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAACGACCATGAGGTGCTaGAGGAAGCAGTGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPTTMRC*RKQCVR
Trigger: CCTGACGCACTGCTTCCTCCAGCACCTCATGGTCGT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACACAGCAACAAAGGACTaGACTCGACACTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHTATKD*TRHFRK
Trigger: TTTCCTGAAGTGTCGAGTCCAGTCCTTTGTTGCTGT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGCTCTCCCACTTGTCTaGATCAGGGGAGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADALPLV*IRGDLH
Trigger: GTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGGTGGGAATGTTTTTCTaGCTCTTAAAACATCGGGTT +
Preference number: 4 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLVGMFF*LLKHRV
Trigger: AACCCGATGTTTTAAGAGCCAGAAAAACATTCCCAC...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp ACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTTACCAGGTCAAGGGGTaGGAATGTTTTTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TVIWYLHRLAWLRYRRQRYQVKG*ECFSGS
Trigger: AGAGCCAGAAAAACATTCCCACCCCTTGACCTGGTA...ACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GAAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAATGGGCAATCATCCTaGCACCTAACCCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: EAKWAIILAPNPIAPRSGNGQSS*HLTPSL
Trigger: GAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATT...TCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCCTGACAGAAGCAAAATaGGCAATCATCCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSLTEAK*AIILAP
Trigger: AGGTGCCAGGATGATTGCCCATTTTGCTTCTGTCAG...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTATCCAGACAGACCTCTaGGGCCCTCTCTCCGAACTG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIIQTDL*GPLSEL
Trigger: CAGTTCGGAGAGAGGGCCTCAGAGGTCTGTCTGGAT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAGGACAGCACGACCATaGGGTGCTGGAGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRTARP*GAGGSS
Trigger: ACTGCTTCCTCCAGCACCTCATGGTCGTGCTGTCCT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGAGCCAACAGCGAGATaGGCTTCTCTCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADEPTAR*ASLCSQ
Trigger: CTGAGAGCAGAGAGAAGCTCATCTCGCTGTTGGCTC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGGAGCTCTTCAGCCAGTaGCGCGGTGATGCCATTTAT +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLELFSQ*RGDAIY
Trigger: ATAAATGGCATCACCGCGGCACTGGCTGAAGAGCTC...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp CCACAAACATGGTGTTCTGGGGCTGGGTCACCCCACAGAGATGAGGCAGTGATAGCTGCTCCTGAATGTTaGTGGTCCCAAAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PQTWCSGAGSPHRDEAVIAAPEC*WSQKVL
Trigger: AAGGACCTTTTGGGACCAGCAACATTCAGGAGCAGC...TATCACTGCCTCATCTCTGTGGGGTGACCCAGCCCCAGAACACCATGTTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGCCTTCTAGGGTTGTaGCTTCAGGCTCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGLLGL*LQAPTH
Trigger: ATGAGTGGGAGCCTGAAGGCACAACCCTAGAAGGCC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAAGGTTATACAGGTaGTGCAGATTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: LENTKACCPAPVGVRLDTTRLYR*CRLSTT
Trigger: GGTTGTGGACAATCTGCAGCACCTGTATAACCTTGT...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTGGGCAATGGGCTGGTaGTCGGGAGTCAGACTGTCA +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIWAMGW*SGVRLS
Trigger: TGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGGCGGATACTGCCCTaGACATGGATCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADWRILP*TWIRKH
Trigger: GTGCTTCCTGATCCATGTGCAGGGCAGTATCCGCCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCGGGATCTCGAAGACTaGGATGCCGAAGTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRDLED*DAEVGE
Trigger: CTCACCGACTTCGGCATCGCAGTCTTCGAGATCCCG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCACAGCATGGCCATGTaGTGGGGTGCAAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADHSMAM*WGAKHE
Trigger: CTCATGCTTTGCACCCCAGCACATGGCCATGCTGTG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTCTGCGTTGGGCCTTTTaGCTTAACTTGAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCLRWAF*LNLNAS
Trigger: AGAAGCATTCAAGTTAAGGCAAAAGGCCCAACGCAG...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCACTGCGTTGGGCCTTTTaGCTTAACTTGAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTALRWAF*LNLNAS
Trigger: AGAAGCATTCAAGTTAAGGCAAAAGGCCCAACGCAG...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp AGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCCGATGTTCACTGATCAACAGATaGTGGCAGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RAAEHSAPQPTLPLILRCSLINR*WQKWLC
Trigger: ACACAGCCATTTCTGCCAGCATCTGTTGATCAGTGA...ACATCGGAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTAGCAGCTCTAGCACGTaGCCATCAGCAAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSASSSST*PSAKAP
Trigger: GGGCGCCTTTGCTGATGGCCACGTGCTAGAGCTGCT...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCTCTCCATCTTCCCTGTaGTCTTGTTCCCAAACTCGG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVSPSSL*SCSQTR
Trigger: CCGAGTTTGGGAACAAGACCACAGGGAAGATGGAGA...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGCTCAGCCATCTTTTaGGCCACAGTGAACGTCAGG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGSAIF*ATVNVR
Trigger: CCTGACGTTCACTGTGGCCCAAAAGATGGCTGAGCC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTCTGCGGCGGCTCTTTaGCAAACTCGGGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSASAAAL*QTRAVG
Trigger: ACCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACTCTGCTCTCAGCACTaGGGACAAACACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPLCSQH*GQTPAT
Trigger: AGTGGCAGGTGTTTGTCCCCAGTGCTGAGAGCAGAG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
3UTR CAA 72 bp CTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTaGAAGAACAATATGGGGTGGGAGCTTCCAATGTGC +
Preference number: 4 (lower is better)
Translates to: LSHLSGSGETST*KNNMGWELPMC
Trigger: GCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCAGCCAGTGCCGCGGTaGTGCCATTTATCTCATAGA +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADQPVPR*CHLSHR
Trigger: TCTATGAGATAAATGGCATCACCGCGGCACTGGCTG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCCTGATGCAGGGACTTaGATATTGATAGGTCGAACG +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVPDAGT*ILIGRT
Trigger: CGTTCGACCTATCAATATTCAAGTCCCTGCATCAGG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLTSNPL*LRSRNS
Trigger: TGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGT...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GAAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAACCTCCTTGGCTTTCTaGATTGCTTTCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: EAKWAIILAPNPIAPRSGTSLAF*IAFSTS
Trigger: GGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGT...TCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTAGCACCACAGCACCTTaGGGATGCGGATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSASTTAP*GCGCAP
Trigger: TGGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCT...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCCACCTTGTAGAAGGTaGGCAGCTGGCGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAPPCRR*AAGAGT
Trigger: AGTTCCTGCGCCAGCTGCTCACCTTCTACAAGGTGG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCTCACTCACTCACTCACTaGTCAACAGATGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PCFGSGEHFTSPSRYLIPHSLTH*STDAGR
Trigger: TCTGCCAGCATCTGTTGATCAGTGAGTGAGTGAGTG...AGGGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTTCAGCAGAGACACGTaGTCCAGACACGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAFSRDT*SRHGRL
Trigger: CAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCTTTCAACCTCAGCAATaGTGCTGTGGAAGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVFQPQQ*CCGRAR
Trigger: TCGAGCTCTTCCACAGCAGCATTGCTGAGGTTGAAA...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTTTCAACCTCAGCAATaGTGCTGTGGAAGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWFQPQQ*CCGRAR
Trigger: TCGAGCTCTTCCACAGCAGCATTGCTGAGGTTGAAA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGAGAACACAAAAGCCTaGTGCCCTGCCCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAENTKA*CPAPVG
Trigger: GCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGCTCATCCTCCGATGTTaGAGTTGCAGCCCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLLILRC*SCSPCF
Trigger: AAAACACGGGCTGCAACTGCAACATCGGAGGATGAG...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTCGGAGACGCTGTTGTaGCTCAGGTCAAGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSASETLL*LRSSVV
Trigger: GACCACGCTTGACCTGAGCCACAACAGCGTCTCCGA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACATACTGCCCTGCACATaGATCAGGAAGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADILPCT*IRKHHS
Trigger: GCTGTGGTGCTTCCTGATCCATGTGCAGGGCAGTAT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCAAAGTACACAGCCTTaGTGGAGAGCAGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIQSTQP*WRAARR
Trigger: CCTGCGTGCTGCTCTCCACCAAGGCTGTGTACTTTG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGTCAGCCGGAAATGCTaGTCGAAAAGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPVSRKC*SKSPTL
Trigger: CAATGTGGGGCTTTTCGACCAGCATTTCCGGCTGAC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTACAAACACCTGCCACTaGACTTCACGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSATNTCH*TSRPWL
Trigger: CAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGT...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCAGCAGACACGACACTaGTGTGCACGGCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAQQTRH*CARLYH
Trigger: GTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTCTGACAGAAGCAAAATaGGCAATCATCCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: LQEAASGKLSHRDITSLALTEAK*AIILAP
Trigger: AGGTGCCAGGATGATTGCCCATTTTGCTTCTGTCAG...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGGGCATCAGAGCAATTaGGAGTCCTCACCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGGHQSN*ESSPSK
Trigger: CTTGCTTGGTGAGGACTCCCAATTGCTCTGATGCCC...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR TCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCTTCATCGAGGTTGCTaGGAAGCGGACACTCAGCGT +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSALHRGC*EADTQR
Trigger: ACGCTGAGTGTCCGCTTCTCAGCAACCTCGATGAAG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCTTTTGGGCCACAGTaGACGTCAGGTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCISFGPQ*TSGPQS
Trigger: AGATTGGGGACCTGACGTTCACTGTGGCCCAAAAGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTTCTCACTCCCAACATaGGAAAGAATTAACACAACA +
Preference number: 4 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHFSLPT*ERINTT
Trigger: TGTTGTGTTAATTCTTTCTCATGTTGGGAGTGAGAA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGCAACGAGCTTTTCATaGAGGTCATGGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPATSFS*RSWKSL
Trigger: CAGCGACTTCCATGACCTGCATGAAAAGCTCGTTGC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGACAAGGTTATACAGGTaGTGCAGATTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWTRLYR*CRLSTT
Trigger: GGTTGTGGACAATCTGCAGCACCTGTATAACCTTGT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCGAACTGGCGGATACTaGCCTGCACATGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSARTGGY*PAHGSG
Trigger: TCCTGATCCATGTGCAGGGCAGTATCCGCCAGTTCG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTTGATGACGTTGAGGTaGTGGGGCGTGAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSALMTLR*WGVSNS
Trigger: GCTGTTGCTCACGCCCCAGCACCTCAACGTCATCAA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTTTTATTTAAGAGGTaGAAATCTGGAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSVLFKR*KSGGHV
Trigger: GACATGGCCTCCAGATTTGCACCTCTTAAATAAAAC...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCTCCCAATTATCTTTTTaGGCGGAAGCAGATTTTTAT +
Preference number: 4 (lower is better)
Translates to: QQTRHWCARLYHLWEADSSQLSF*AEADFY
Trigger: ATAAAAATCTGCTTCCGCCCAAAAAGATAATTGGGA...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGGCTCAGGTCAAGCGTaGTCAATGCCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPGSGQA*SMPAKW
Trigger: CCACTTGGCAGGCATTGACCACGCTTGACCTGAGCC...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTGTCAGCCGGAAATGCTaGTCGAAAAGCCCCACATTG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIVSRKC*SKSPTL
Trigger: CAATGTGGGGCTTTTCGACCAGCATTTCCGGCTGAC...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCACAGCAACAAAGGACTaGACTCGACACTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVTATKD*TRHFRK
Trigger: TTTCCTGAAGTGTCGAGTCCAGTCCTTTGTTGCTGT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCAGGTTTAAGGTCTTaGTGTTCCCCAGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPGLRS*CSPAWC
Trigger: ACACCAAGCTGGGGAACATCAAGACCTTAAACCTGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAACCTCCTTGGCTTTCTaGATTGCTTTCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPTSLAF*IAFSTS
Trigger: GGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGTGCTCAGTTTGGACTTaGCCTCCTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGCSVWT*PPWLSE
Trigger: TTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCA...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGCTCAGTTTGGACTTaGCCTCCTTGGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADCSVWT*PPWLSE
Trigger: TTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACAGCAGACACGCTCATaGGACCTGCTTCACTCACTC +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPQQTRS*DLLHSL
Trigger: GAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GATAGTGGGCAGACGAATGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATATCAATCTTTCTCTCTaGAACGAGCTTTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: DSGQTNGPGLPWVHRDRDINLSL*NELFMQ
Trigger: CTGCATGAAAAGCTCGTTGCAGAGAGAAAGATTGAT...ATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGCCCACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR GCA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGACAAGGTTATACAGGTaGTGCAGATTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLTRLYR*CRLSTT
Trigger: GGTTGTGGACAATCTGCAGCACCTGTATAACCTTGT...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCCCACATTGACTGACTaGAGGTCACTAAGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADPTLTD*RSLSFS
Trigger: GCTAAAGCTTAGTGACCTGCAGTCAGTCAATGTGGG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGGATTAGCAGCAAGATaGCAACAGCAACAGCAACAG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADGLAAR*QQQQQQ
Trigger: CTGTTGCTGTTGCTGTTGGCATCTTGCTGCTAATCC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTGGGAGCTTCCAATGTaGATTCTGCTACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIWELPM*ILLPAS
Trigger: TGAGGCTGGTAGCAGAATGCACATTGGAAGCTCCCA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAACGAACATGATTCCTTaGTTAGAGAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGSGETSTLKNNMGWELPTNMIP*LERMGW
Trigger: CCAGCCCATCCTCTCTAACCAAGGAATCATGTTCGT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCATCTCCGAGGATGCCTTaGTTAGAGAGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPSPRMP*LERMGW
Trigger: CCAGCCCATCCTCTCTAACCAAGGCATCCTCGGAGA...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420808.2
CDS-3UTR TCA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCTGATGCAGGGACTTaGATATTGATAGGTCGAACG +
Preference number: 4 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPDAGT*ILIGRT
Trigger: CGTTCGACCTATCAATATTCAAGTCCCTGCATCAGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCATCAATCTTTCTCTCTaGAACGAGCTTTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: ARVLAVVSISPPLPGILSINLSL*NELFMQ
Trigger: CTGCATGAAAAGCTCGTTGCAGAGAGAAAGATTGAT...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGCTGCTCCTGAATGTTaGTGGTCCCAAAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAAAPEC*WSQKVL
Trigger: AAGGACCTTTTGGGACCAGCAACATTCAGGAGCAGC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCATGTTCACATTCTCTaGGAGGACAGTCAAATTAAG +
Preference number: 4 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWHVHIL*EDSQIK
Trigger: CTTAATTTGACTGTCCTCGCAGAGAATGTGAACATG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACTCAGTGTGCTGCTCTaGGTTGGGCCTTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPLSVLL*VGPFAL
Trigger: TAAGGCAAAAGGCCCAACGCAGAGCAGCACACTGAG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CCA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTCTCCATCTTCCCTGTaGTCTTGTTCCCAAACTCGG +
Preference number: 4 (lower is better)
Translates to: DLHFEEQYGVGASNVHSASPSSL*SCSQTR
Trigger: CCGAGTTTGGGAACAAGACCACAGGGAAGATGGAGA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR GCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAACTCATCTCCGAGGATaGCTGGGTTCAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPTHLRG*LGSEVK
Trigger: TTTCACCTCTGAACCCAGGCATCCTCGGAGATGAGT...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACAAGAACAATATGGGGTaGGAGCTTCCAATGTGCATT +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADKNNMG*ELPMCI
Trigger: AATGCACATTGGAAGCTCCCACCCCATATTGTTCTT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CCA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAGTGGGAATGTTTTTCTaGCTCTTAAAACATCGGGTT +
Preference number: 4 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEVGMFF*LLKHRV
Trigger: AACCCGATGTTTTAAGAGCCAGAAAAACATTCCCAC...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR TCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACCTGATGCAGGGACTTaGATATTGATAGGTCGAACG +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPPDAGT*ILIGRT
Trigger: CGTTCGACCTATCAATATTCAAGTCCCTGCATCAGG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR GCA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACATCAATCTTTCTCTCTaGAACGAGCTTTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADINLSL*NELFMQ
Trigger: CTGCATGAAAAGCTCGTTGCAGAGAGAAAGATTGAT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR TCA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACTTAAAACATCGGGTTaGACTGTTTTCCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPLKTSG*TVFPRP
Trigger: AGGTCTTGGGAAAACAGTTCAACCCGATGTTTTAAG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS GCA 90 bp CGCGCGCTTCCTTGGCCGGCTCGGCTTCCCGCTCGGGCCCGAAGGTaGGCGCGGTCGCCATGTTCGGGTCTCCGCCGCCACCGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: RALPWPARLPARARR*ARSPCSGLRRHRRP
Trigger: CGGGCGGCGGTGGCGGCGGAGACCCGAACATGGCGACCGCGCGCACCTTCGGGCCCGAGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CCCGAGCCTCGGCTCCACTCGGGACGGCACACCCTCCCCTCTTCCGTGGGGGCCACGACGCGCGCTTCCTaGGCCGGCTCGGCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: PEPRLHSGRHTLPSSVGATTRAS*AGSASR
Trigger: GCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGT...GGCCCCCACGGAAGAGGGGAGGGTGTGCCGTCCCGAGTGGAGCCGAGGCTCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp CGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCGGACGACGCGCGCTTCCTaGGCCGGCTCGGCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: RLQEPGQAASFPACPEPRTTRAS*AGSASR
Trigger: GCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGT...CCGAGGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS CCA 90 bp CCGTATAAGTGTCCACAAGCTCCGAGCCCACGACGCGCGCTTCCTTaGCCGGCTCGGCTTCCCGCTCGGGCCCGAAGGTGCGCGCGGTCG +
Preference number: 5 (lower is better)
Translates to: PYKCPQAPSPRRALP*PARLPARARRCARS
Trigger: CGACCGCGCGCACCTTCGGGCCCGAGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGTGGGCTCGGAGCTTGTGGACACTTATACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
CDS GCA 90 bp CCTCAGAGGGCGCGCAGCAGGAGCGCCGCACGGCTGAACAGAGTGTaGAGCTGGCCCACTCGATGTTGCCTGAGTAGTCCCCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PQRARSRSAARLNRV*SWPTRCCLSSPRRP
Trigger: CGGCCGCCGGGGACTACTCAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCCTGCTGCGCGCCCTCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp TGGCCCTCCTCCCGCTGGTTGGCAGCCTCGATCCAGGCAGGCAGCTaGCGCTCGATGGCCTGCCGGATCAGTGTGCTCAGGCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: WPSSRWLAASIQAGS*RSMACRISVLRRWM
Trigger: CATCCAGCGCCTGAGCACACTGATCCGGCAGGCCATCGAGCGGCAGCTGCCTGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS CCA 90 bp AGGGCGCGCAGCAGGAGCGCCGCACGGCTGAACAGAGTGTGCAGCTaGCCCACTCGATGTTGCCTGAGTAGTCCCCGGCGGCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: RARSRSAARLNRVCS*PTRCCLSSPRRPSA
Trigger: TGCAGACGGCCGCCGGGGACTACTCAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCCTGCTGCGCGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp TGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGGCTGTaGCCTGGGCTAGCCGGTGAGCTCGACAGGCAGCTCACGGCCACA +
Preference number: 5 (lower is better)
Translates to: CPAPVGVRLDTTGWL*PGLAGELDRQLTAT
Trigger: TGTGGCCGTGAGCTGCCTGTCGAGCTCACCGGCTAGCCCAGGCCACAGCCAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGACGACGCGCGCTTCCTaGGCCGGCTCGGCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLTTRAS*AGSASR
Trigger: GCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGT...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS CCA 90 bp ACGAGCAGCTCTAGCACGTGGCCATCAGCAAAGGCGCCCCGAGGCTaGGTACAGCTGCGTGTGGGGTCCAGCAGCACGGTGGAGAGCGGC +
Preference number: 5 (lower is better)
Translates to: TSSSSTWPSAKAPRG*VQLRVGSSSTVESG
Trigger: GCCGCTCTCCACCGTGCTGCTGGACCCCACACGCAGCTGTACCCAGCCTCGGGGCGCCTTTGCTGATGGCCACGTGCTAGAGCTGCTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS-3UTR CAA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACGACGCGCGCTTCCTaGGCCGGCTCGGCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: QQTRHWCARLYHLWEADSTTRAS*AGSASR
Trigger: GCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCGCTGTGTCCCTGGCCTaGAGAAGCAGATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SASPGARAGGVLSCVSRAAVSLA*RSRCSS
Trigger: GGAGCTGCATCTGCTTCTCAAGGCCAGGGACACAGC...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCCTGTGTCTGACCCTGTaGGAAGCAGGTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: SASPGARAGGVLSCVSRALCLTL*EAGAGT
Trigger: GGTGCCAGCACCTGCTTCCAACAGGGTCAGACACAG...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS TCA 90 bp GCGACGTGCCGGAGCGACGGGCAGGCAGGCAAGTGCGAGGGGATCTaGTTCTCCTCCGAGGTGGCCTGGATGAGGTGCTCACTCGGGTAC +
Preference number: 5 (lower is better)
Translates to: ATCRSDGQAGKCEGI*FSSEVAWMRCSLGY
Trigger: GTACCCGAGTGAGCACCTCATCCAGGCCACCTCGGAGGAGAATCAGATCCCCTCGCACTTGCCTGCCTGCCCGTCGCTCCGGCACGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CTGCCACTGGACTTCACGGCCCTGGCTGGCTCTAGCCGGGCCACCTaGCACCTCCCCAAAGTGGTCCAGGGTGACACTGCCCATGAGGTC +
Preference number: 5 (lower is better)
Translates to: LPLDFTALAGSSRAT*HLPKVVQGDTAHEV
Trigger: GACCTCATGGGCAGTGTCACCCTGGACCACTTTGGGGAGGTGCCAGGTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp ATAGCTGGCACCCACACCCGGGCCGCTACCTCAGCAATGCTGCTGTaGAAGAGCTCGATGATGGCGCTGCCCCGCAGGCTGGCGACGTGC +
Preference number: 5 (lower is better)
Translates to: IAGTHTRAATSAMLL*KSSMMALPRRLATC
Trigger: GCACGTCGCCAGCCTGCGGGGCAGCGCCATCATCGAGCTCTTCCACAGCAGCATTGCTGAGGTAGCGGCCCGGGTGTGGGTGCCAGCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTGCCCGAGGTCGGTCTaGGCATCCCCACTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLCPRSV*ASPLAH
Trigger: GTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCATCTCGGAGACGCTGTaGTGGCTCAGGTCAAGCGTG +
Preference number: 5 (lower is better)
Translates to: SASPGARAGGVLSCVSRAISETL*WLRSSV
Trigger: CACGCTTGACCTGAGCCACAACAGCGTCTCCGAGAT...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGCCCTCCTCCCGCTGGTaGGCAGCCTCGATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLPSSRW*AASIQA
Trigger: TGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGGG...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp CATCCCCACTGGCGCACGTGGGCTTTCCCTGCTGCAGCTGCTCCGTaGCGGCATACAGCTGCAGGGGTCCAATGGCAAAGACCTCGCCGG +
Preference number: 5 (lower is better)
Translates to: HPHWRTWAFPAAAAP*RHTAAGVQWQRPRR
Trigger: CCGGCGAGGTCTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS TCA 90 bp CAGGCTCCGGCGAGGGCGTGCGTTCCAGAGAGGACAGCACGACCATaGGGTGCTGGAGGAAGCAGTGCGTCAGGTAGCTGTCCCGCGTCA +
Preference number: 5 (lower is better)
Translates to: QAPARACVPERTARP*GAGGSSASGSCPAS
Trigger: TGACGCGGGACAGCTACCTGACGCACTGCTTCCTCCAGCACCTCATGGTCGTGCTGTCCTCTCTGGAACGCACGCCCTCGCCGGAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp CACGTGGGCTTTCCCTGCTGCAGCTGCTCCGTGACGGCATACAGCTaGAGGGGTCCAATGGCAAAGACCTCGCCGGCCCCCAGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: HVGFPCCSCSVTAYS*RGPMAKTSPAPRSC
Trigger: ACAGCTCCTGGGGGCCGGCGAGGTCTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 90 bp AGCGCCGCACGGCTGAACAGAGTGTGCAGCTGGCCCACTCGATGTTaGCTGAGTAGTCCCCGGCGGCCGTCTGCACCATGCGCTTGTCAC +
Preference number: 5 (lower is better)
Translates to: SAARLNRVCSWPTRC*LSSPRRPSAPCACH
Trigger: GTGACAAGCGCATGGTGCAGACGGCCGCCGGGGACTACTCAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp TCCTCTTCTTCCTCCTCCTCATCCTCCTCCTCGCCCTGTTCACCCTaGCCCTCCTCCCGCTGGTTGGCAGCCTCGATCCAGGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSSPCSP*PSSRWLAASIQAGS
Trigger: GCTGCCTGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGGGCCAGGGTGAACAGGGCGAGGAGGAGGATGAGGAGGAGGAAGAAGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS CCA 90 bp CTCTCAGCACTGGGGACAAACACCTGCCACTGGACTTCACGGCCCTaGCTGGCTCTAGCCGGGCCACCTGGCACCTCCCCAAAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LSALGTNTCHWTSRP*LALAGPPGTSPKWS
Trigger: GGACCACTTTGGGGAGGTGCCAGGTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAGTGCTGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CAGGTGAAGGGCAGGAAGATGATCTGGCCAGACCCCGGCACCACCTaGACCTCCGGCTCGGCATGTTCTGGGCTTGGGTGGCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QVKGRKMIWPDPGTT*TSGSACSGLGWLRQ
Trigger: CTGCCTCAGCCACCCAAGCCCAGAACATGCCGAGCCGGAGGTCCAGGTGGTGCCGGGGTCTGGCCAGATCATCTTCCTGCCCTTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488243.1
CDS-3UTR CAA 90 bp TGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCATGCCCGAGGTCGGTCTaGGCATCCCCACTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: WAWSSMGPQGQRWPILAPCPRSV*ASPLAH
Trigger: GTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCA...TGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS TCA 90 bp GAGGATGGGGCTACACAGCATGGCCATGTGCTGGGGTGCAAAGCATaGGCGCAGGTCCGCGTGGAACTCGTGCAGGTTGGCGGCGTCCGA +
Preference number: 5 (lower is better)
Translates to: EDGATQHGHVLGCKA*AQVRVELVQVGGVR
Trigger: TCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACCCCAGCACATGGCCATGCTGTGTAGCCCCATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp AGGTCGGTCTTGGCATCCCCACTGGCGCACGTGGGCTTTCCCTGCTaGAGCTGCTCCGTGACGGCATACAGCTGCAGGGGTCCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RSVLASPLAHVGFPC*SCSVTAYSCRGPMA
Trigger: TGCCATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGACCGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 90 bp CCCACTCGATGTTGCCTGAGTAGTCCCCGGCGGCCGTCTGCACCATaGGCTTGTCACTGTAGACCAGGTAGACGGGGAAGCAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PTRCCLSSPRRPSAP*ACHCRPGRRGSSPG
Trigger: GCCAGGGCTGCTTCCCCGTCTACCTGGTCTACAGTGACAAGCGCATGGTGCAGACGGCCGCCGGGGACTACTCAGGCAACATCGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CCTGCAGGCTGGTGTGGCTGCCGTAGAGGATGGGGCTACACAGCATaGCCATGTGCTGGGGTGCAAAGCATGAGCGCAGGTCCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: PAGWCGCRRGWGYTA*PCAGVQSMSAGPRG
Trigger: TCCACGCGGACCTGCGCTCATGCTTTGCACCCCAGCACATGGCCATGCTGTGTAGCCCCATCCTCTACGGCAGCCACACCAGCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CCGGTGAGCTCGACAGGCAGCTCACGGCCACACAGGGCCTCCCACTaGCGAGCCAACAGCGAGATGAGCTTCTCTCTGCTCTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: PVSSTGSSRPHRASH*RANSEMSFSLLSAL
Trigger: CAGTGCTGAGAGCAGAGAGAAGCTCATCTCGCTGTTGGCTCGCCAGTGGGAGGCCCTGTGTGGCCGTGAGCTGCCTGTCGAGCTCACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS-3UTR CAA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCGCCAGGTTTAAGGTCTaGATGTTCCCCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SASPGARAGGVLSCVSRAARFKV*MFPSLV
Trigger: CACCAAGCTGGGGAACATCAAGACCTTAAACCTGGC...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTTGCGGTTGCGACAGTaGTGGGTGCCACGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLLRLRQ*WVPRLG
Trigger: GCCCAACCGTGGCACCCACAACTGTCGCAACCGCAA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCCCGTCCCGGGGGTCTaGGCGATGACCACAGTCTTC +
Preference number: 5 (lower is better)
Translates to: QQTRHWCARLYHLWEADSPVPGV*AMTTVF
Trigger: GAAGACTGTGGTCATCGCCAAGACCCCCGGGACGGG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGCGTCTCCAGGAGCCCGGGCAGGCGGCGTCCTTTCCTGCGTGTCCCGAGCCTCTCATCCTCCGATGTaGCAGTTGCAGCCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: SASPGARAGGVLSCVSRASHPPM*QLQPVF
Trigger: AAACACGGGCTGCAACTGCAACATCGGAGGATGAGA...GGCTCGGGACACGCAGGAAAGGACGCCGCCTGCCCGGGCTCCTGGAGACGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp CTGCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCCCTCCACAGGCTCGCTaGGCTGCGCTACAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLGGLLSILHHSRLSLSSPPQAR*AALQEA
Trigger: TGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG...GGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS TCA 90 bp GCTGGAGGAAGCAGTGCGTCAGGTAGCTGTCCCGCGTCAAGCACGTaGCCACCTGCATCGGGGTGGAACCCGTCAGCCGGAAATGCTGGT +
Preference number: 5 (lower is better)
Translates to: AGGSSASGSCPASST*PPASGWNPSAGNAG
Trigger: ACCAGCATTTCCGGCTGACGGGTTCCACCCCGATGCAGGTGGTCACGTGCTTGACGCGGGACAGCTACCTGACGCACTGCTTCCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp GTCTTGGCATCCCCACTGGCGCACGTGGGCTTTCCCTGCTGCAGCTaGTCCGTGACGGCATACAGCTGCAGGGGTCCAATGGCAAAGACC +
Preference number: 5 (lower is better)
Translates to: VLASPLAHVGFPCCS*SVTAYSCRGPMAKT
Trigger: GGTCTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS CCA 90 bp CAGGTGAAGGGCAGGAAGATGATCTGGCCAGACCCCGGCACCACCTaGACCTCCGGCTCGGCATGTTCTGGGCTTGCACCACCAACAGCT +
Preference number: 5 (lower is better)
Translates to: QVKGRKMIWPDPGTT*TSGSACSGLAPPTA
Trigger: AGCTGTTGGTGGTGCAAGCCCAGAACATGCCGAGCCGGAGGTCCAGGTGGTGCCGGGGTCTGGCCAGATCATCTTCCTGCCCTTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp AAGCGCAGGGAGGAGAGGATGTGCTGGCTGCTGCCCCGAGACTCCTaGTGCGGGATCTCGAAGACTGCGATGCCGAAGTCGGTGAGCACA +
Preference number: 5 (lower is better)
Translates to: KRREERMCWLLPRDS*CGISKTAMPKSVST
Trigger: TGTGCTCACCGACTTCGGCATCGCAGTCTTCGAGATCCCGCACCAGGAGTCTCGGGGCAGCAGCCAGCACATCCTCTCCTCCCTGCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CACAGCCTTGGTGGAGAGCAGCACGCAGGCAGTCACCTCCAGCCCTaGGGTCTGGTAGAACACCACCGAGGACCACATGAGGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: HSLGGEQHAGSHLQP*GLVEHHRGPHEVPQ
Trigger: CTGAGGCACCTCATGTGGTCCTCGGTGGTGTTCTACCAGACCCCAGGGCTGGAGGTGACTGCCTGCGTGCTGCTCTCCACCAAGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
CDS CCA 90 bp GGCGGCCATCGTCCAGCCGGTACCTGTCTCTCTGCGGCGGCTCTTTaGCAAACTCGGGCAGTGGGTAGTGGACACAGTCCTCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: GGHRPAGTCLSAAAL*QTRAVGSGHSPHPG
Trigger: TCCTGGATGAGGACTGTGTCCACTACCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGAGAGACAGGTACCGGCTGGACGATGGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp ATGAGCTTCTCTCTGCTCTCAGCACTGGGGACAAACACCTGCCACTaGACTTCACGGCCCTGGCTGGCTCTAGCCGGGCCACCTGGCACC +
Preference number: 5 (lower is better)
Translates to: MSFSLLSALGTNTCH*TSRPWLALAGPPGT
Trigger: GGTGCCAGGTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAGTGCTGAGAGCAGAGAGAAGCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp GTCCTCGCTCCACTCCTCCCAGCCATGTGCCCTCAGGCTGGTGACTaGGCCGCTGACCCCGTATCCTTCCCTATACCTGTGGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VLAPLLPAMCPQAGD*AADPVSFPIPVAPF
Trigger: GAAAGGAGCCACAGGTATAGGGAAGGATACGGGGTCAGCGGCCCAGTCACCAGCCTGAGGGCACATGGCTGGGAGGAGTGGAGCGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS-3UTR CAA 90 bp GCACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCAGACTCTCTAGGAGGTaGCCTGCCAGGTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: AHPPLFRGGRASRHAHETRLSRR*PARFKV
Trigger: GACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTCT...GGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGGGGATGGCGGCGGACTaGACGGCCTCAGAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWGMAAD*TASEGA
Trigger: CGCGCCCTCTGAGGCCGTCAAGTCCGCCGCCATCCC...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTTGTGGGTGCCACGGTaGGGCATGGGGTTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLLWVPR*GMGLKS
Trigger: CGACTTCAACCCCATGCCCAACCGTGGCACCCACAA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp GGCGGATACTGCCCTGCACATGGATCAGGAAGCACCACAGCACCTTaGGGATGCGGATGTGCTCCAGCAGGAAGTCCTCGTCCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: GGYCPAHGSGSTTAP*GCGCAPAGSPRPRP
Trigger: TGGGCGCGGACGAGGACTTCCTGCTGGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCTTCCTGATCCATGTGCAGGGCAGTATCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 90 bp GAGACTCCTGGTGCGGGATCTCGAAGACTGCGATGCCGAAGTCGGTaGGCACAAGGCAGGCGGCGAACTGGCGGATACTGCCCTGCACAT +
Preference number: 5 (lower is better)
Translates to: ETPGAGSRRLRCRSR*AQGRRRTGGYCPAH
Trigger: ATGTGCAGGGCAGTATCCGCCAGTTCGCCGCCTGCCTTGTGCTCACCGACTTCGGCATCGCAGTCTTCGAGATCCCGCACCAGGAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 90 bp GCTCACGGCCACACAGGGCCTCCCACTGGCGAGCCAACAGCGAGATaGGCTTCTCTCTGCTCTCAGCACTGGGGACAAACACCTGCCACT +
Preference number: 5 (lower is better)
Translates to: AHGHTGPPTGEPTAR*ASLCSQHWGQTPAT
Trigger: AGTGGCAGGTGTTTGTCCCCAGTGCTGAGAGCAGAGAGAAGCTCATCTCGCTGTTGGCTCGCCAGTGGGAGGCCCTGTGTGGCCGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 90 bp TGCCCTTACAACCCCTGGCCAATTCCCAAGGCTGCGTCAGTCTCCTaGAATCTCAGGGCGGGGCCTTGGGAGTGTGTGCGGGCAGCACTG +
Preference number: 5 (lower is better)
Translates to: CPYNPWPIPKAASVS*NLRAGPWECVRAAL
Trigger: CAGTGCTGCCCGCACACACTCCCAAGGCCCCGCCCTGAGATTTCAGGAGACTGACGCAGCCTTGGGAATTGGCCAGGGGTTGTAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS GCA 90 bp GCGGGAAGCAAAAGACAAAGCGCAGGGAGGAGAGGATGTGCTGGCTaGTGCCCCGAGACTCCTGGTGCGGGATCTCGAAGACTGCGATGC +
Preference number: 5 (lower is better)
Translates to: AGSKRQSAGRRGCAG*CPETPGAGSRRLRC
Trigger: GCATCGCAGTCTTCGAGATCCCGCACCAGGAGTCTCGGGGCAGCAGCCAGCACATCCTCTCCTCCCTGCGCTTTGTCTTTTGCTTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp AGCGAGATGAGCTTCTCTCTGCTCTCAGCACTGGGGACAAACACCTaGCACTGGACTTCACGGCCCTGGCTGGCTCTAGCCGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: SEMSFSLLSALGTNT*HWTSRPWLALAGPP
Trigger: AGGTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAGTGCTGAGAGCAGAGAGAAGCTCATCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp GCAACCTCCGAAATGCAAACACCCAGGTCAGGCGCAGGCCTATGGTaGCAGCGTGGTGCAGAGCCTGGAAGCAGGATGGGTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: ATSEMQTPRSGAGLW*QRGAEPGSRMGSEP
Trigger: GGGCTCAGAACCCATCCTGCTTCCAGGCTCTGCACCACGCTGGCACCATAGGCCTGCGCCTGACCTGGGTGTTTGCATTTCGGAGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS CCA 90 bp AAGATGGCAGTGACAAAGCGGTACCCCACGAGCAGCTCTAGCACGTaGCCATCAGCAAAGGCGCCCCGAGGCTGGGTACAGCTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: KMAVTKRYPTSSSST*PSAKAPRGWVQLRV
Trigger: CACACGCAGCTGTACCCAGCCTCGGGGCGCCTTTGCTGATGGCCACGTGCTAGAGCTGCTCGTGGGGTACCGCTTTGTCACTGCCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS-3UTR CAA 90 bp CCCGAGCCTGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCCTTCCTTCATCGAGGTaGCTGAGAAGCGGACACTCA +
Preference number: 5 (lower is better)
Translates to: PEPVQRAASGPVRHPAVSLPSSR*LRSGHS
Trigger: TGAGTGTCCGCTTCTCAGCAACCTCGATGAAGGAAG...GGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACAGGCTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CAA 90 bp CCCTGCCCCCACGGGCTCTCCCACTTGTCTGGATCAGGGGAGACCTCCACTTTGTGGAACTCGTGCAGGTaGGCGGCGTCCGAGATAATG +
Preference number: 5 (lower is better)
Translates to: PCPHGLSHLSGSGETSTLWNSCR*AASEIM
Trigger: CATTATCTCGGACGCCGCCAACCTGCACGAGTTCCA...CAAAGTGGAGGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTGGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTGGAACTCGTGCAGGTaGGCGGCGTCCGAGATAATG +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLWNSCR*AASEIM
Trigger: CATTATCTCGGACGCCGCCAACCTGCACGAGTTCCA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TGTTCAGAGGGCAGCCTCAGGGCCTGTCAGACACCCTGCGGTCTCCTAGAGGAGGCTGTGTCCCTGGCCTaGAGAAGCAGATGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CSEGSLRACQTPCGLLEEAVSLA*RSRCSS
Trigger: GGAGCTGCATCTGCTTCTCAAGGCCAGGGACACAGC...CTCCTCTAGGAGACCGCAGGGTGTCTGACAGGCCCTGAGGCTGCCCTCTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS TCA 90 bp CGCGCAGGAAGTGGAACTTCTCGTGGGGCAGCACGAAGATGGCAGTaGCAAAGCGGTACCCCACGAGCAGCTCTAGCACGTGGCCATCAG +
Preference number: 5 (lower is better)
Translates to: RAGSGTSRGAARRWQ*QSGTPRAALARGHQ
Trigger: CTGATGGCCACGTGCTAGAGCTGCTCGTGGGGTACCGCTTTGTCACTGCCATCTTCGTGCTGCCCCACGAGAAGTTCCACTTCCTGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 90 bp ACACCCTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATaGGACCTGCTTCACTCACTCATCTCCGAGGATGCCTTGGTTAGA +
Preference number: 5 (lower is better)
Translates to: TPSPLPWGPGQQTRS*DLLHSLISEDALVR
Trigger: TCTAACCAAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420808.2
ENST00000485765.5
ENST00000489895.5
CDS TCA 90 bp CACCCTGGGGCCCATGACGTCTGTCCAGGCAGCCTGTCTGCAGCCTaGGCTAGACAGGGGTACCTGTGGTCTTGTTCCCAAACTCGGAGT +
Preference number: 5 (lower is better)
Translates to: HPGAHDVCPGSLSAA*ARQGYLWSCSQTRS
Trigger: ACTCCGAGTTTGGGAACAAGACCACAGGTACCCCTGTCTAGCTCAGGCTGCAGACAGGCTGCCTGGACAGACGTCATGGGCCCCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS GCA 90 bp GGGATGGACTCCAAGGAATCAGAACATCCCTGGGCAATGGGCTGGTaGTCGGGAGTCAGACTGTCAGTGGACGAGAGGCTGCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GMDSKESEHPWAMGW*SGVRLSVDERLLAR
Trigger: CCTGGCCAGCAGCCTCTCGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGAGTCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS GCA 90 bp GGAAGCAAAAGACAAAGCGCAGGGAGGAGAGGATGTGCTGGCTGCTaGCCCGAGACTCCTGGTGCGGGATCTCGAAGACTGCGATGCCGA +
Preference number: 5 (lower is better)
Translates to: GSKRQSAGRRGCAGC*PETPGAGSRRLRCR
Trigger: TCGGCATCGCAGTCTTCGAGATCCCGCACCAGGAGTCTCGGGGCAGCAGCCAGCACATCCTCTCCTCCCTGCGCTTTGTCTTTTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp CCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTaGTTCACTCACTCATCTCCGAGGATGCCTTGGTTAGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: PLFRGGRASRHAHET*FTHSSPRMPWLERM
Trigger: CATCCTCTCTAACCAAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420808.2
ENST00000485765.5
ENST00000489895.5
CDS CCA 90 bp GCAGGGATGGACTCCAAGGAATCAGAACATCCCTGGGCAATGGGCTaGTGCTCGGGAGTCAGACTGTCAGTGGACGAGAGGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AGMDSKESEHPWAMG*CSGVRLSVDERLLA
Trigger: GGCCAGCAGCCTCTCGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGAGTCCATCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS CCA 90 bp GTCCCGCAGGGATGGACTCCAAGGAATCAGAACATCCCTGGGCAATaGGCTGGTGCTCGGGAGTCAGACTGTCAGTGGACGAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VPQGWTPRNQNIPGQ*AGARESDCQWTRGC
Trigger: GCAGCCTCTCGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGAGTCCATCCCTGCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS CCA 90 bp GCTGCCTGTCCCGCAGGGATGGACTCCAAGGAATCAGAACATCCCTaGGCAATGGGCTGGTGCTCGGGAGTCAGACTGTCAGTGGACGAG +
Preference number: 5 (lower is better)
Translates to: AACPAGMDSKESEHP*AMGWCSGVRLSVDE
Trigger: CTCGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGAGTCCATCCCTGCGGGACAGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS CCA 90 bp AAGACTGCGATGCCGAAGTCGGTGAGCACAAGGCAGGCGGCGAACTaGCGGATACTGCCCTGCACATGGATCAGGAAGCACCACAGCACC +
Preference number: 5 (lower is better)
Translates to: KTAMPKSVSTRQAAN*RILPCTWIRKHHST
Trigger: GGTGCTGTGGTGCTTCCTGATCCATGTGCAGGGCAGTATCCGCCAGTTCGCCGCCTGCCTTGTGCTCACCGACTTCGGCATCGCAGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp AGCATGGCCATGTGCTGGGGTGCAAAGCATGAGCGCAGGTCCGCGTaGAACTCGTGCAGGTTGGCGGCGTCCGAGATAATGAAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: SMAMCWGAKHERRSA*NSCRLAASEIMKSV
Trigger: CACGCTCTTCATTATCTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACCCCAGCACATGGCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp AGCGGCACACGGCTGAGCTTGAAGCTGTTGCGGTTGCGACAGTTGTaGGTGCCACGGTTGGGCATGGGGTTGAAGTCGGCCTTGATGACG +
Preference number: 5 (lower is better)
Translates to: SGTRLSLKLLRLRQL*VPRLGMGLKSALMT
Trigger: CGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CATGCCCACCTGGAAGGCCTGCACGTACAGCAGGATGCTGAGGGCTaGGGCCTTCTCTGGCTCAGCCATCTTTTGGGCCACAGTGAACGT +
Preference number: 5 (lower is better)
Translates to: HAHLEGLHVQQDAEG*GLLWLSHLLGHSER
Trigger: ACGTTCACTGTGGCCCAAAAGATGGCTGAGCCAGAGAAGGCCCCAGCCCTCAGCATCCTGCTGTACGTGCAGGCCTTCCAGGTGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp TACCTGGGGCTGGAAGTGGCACAGGAGGTGGTGACACAGCACAAATaGCCAGGGGAGGGCAACTCAGGACCTCACTGCCCAGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: YLGLEVAQEVVTQHK*PGEGNSGPHCPGPQ
Trigger: TTGAGGACCTGGGCAGTGAGGTCCTGAGTTGCCCTCCCCTGGCCATTTGTGCTGTGTCACCACCTCCTGTGCCACTTCCAGCCCCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS-3UTR CAA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCTGCCCGAGGTCGGTCTaGGCATCCCCACTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: ARVLAVVSISPPLPGILSCPRSV*ASPLAH
Trigger: GTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCA...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCAAGACTCTCTAGGAGGTaGCCTGCCAGGTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: LPSSVGAGPADTLMRPASRLSRR*PARFKV
Trigger: GACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTCT...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCGGCATGTTCTGGGCTaGCACCACCAACAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHRHVLG*HHQQLL
Trigger: CAGGAGCTGTTGGTGGTGCAAGCCCAGAACATGCCG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCGGTTGGGCATGGGGTaGAAGTCGGCCTTGATGACG +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHRLGMG*KSALMT
Trigger: CGTCATCAAGGCCGACTTCAACCCCATGCCCAACCG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTTGAAGCTGTTGCGGTaGCGACAGTTGTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLLKLLR*RQLWVP
Trigger: TGGCACCCACAACTGTCGCAACCGCAACAGCTTCAA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGCACGGGCTCTCCCACTaGTCTGGATCAGGGGAGACC +
Preference number: 5 (lower is better)
Translates to: LENTKACCPAPVGVRLDTHGLSH*SGSGET
Trigger: GGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTG...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp TGTTGTGGCTCAGGTCAAGCGTGGTCAATGCCTGCCAAGTGGGGATaGCGGCAGTCACAGGGCCTTCTAGGGTTGTGCCTTCAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CCGSGQAWSMPAKWG*RQSQGLLGLCLQAP
Trigger: GGGAGCCTGAAGGCACAACCCTAGAAGGCCCTGTGACTGCCGTCATCCCCACTTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS TCA 90 bp CCCTCTCTCCGAACTGAGCCAGCACCTTGGTCCGGTAGTCGGGGATaGTGCTCAGAGGGTTGTTCAGCAGAGACACGTGCTCCAGACACG +
Preference number: 5 (lower is better)
Translates to: PSLRTEPAPWSGSRG*CSEGCSAETRAPDT
Trigger: CGTGTCTGGAGCACGTGTCTCTGCTGAACAACCCTCTGAGCATCATCCCCGACTACCGGACCAAGGTGCTGGCTCAGTTCGGAGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS GCA 90 bp CTGCGTCAGTCTCCTGAAATCTCAGGGCGGGGCCTTGGGAGTGTGTaGGGGCAGCACTGGTCTCCAAAGGCACTACCTGCAGATTGTCCA +
Preference number: 5 (lower is better)
Translates to: LRQSPEISGRGLGSV*GQHWSPKALPADCP
Trigger: TGGACAATCTGCAGGTAGTGCCTTTGGAGACCAGTGCTGCCCGCACACACTCCCAAGGCCCCGCCCTGAGATTTCAGGAGACTGACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CCA 90 bp CCGGTACCTGTCTCTCTGCGGCGGCTCTTTGGCAAACTCGGGCAGTaGGTAGTGGACACAGTCCTCATCCAGGAGGAAGATCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: PVPVSLRRLFGKLGQ*VVDTVLIQEEDLGA
Trigger: AGCTCCGAGATCTTCCTCCTGGATGAGGACTGTGTCCACTACCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGAGAGACAGGTACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTGGGATGGCGGCGGACTaGACGGCCTCAGAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCIGMAAD*TASEGA
Trigger: CGCGCCCTCTGAGGCCGTCAAGTCCGCCGCCATCCC...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CCACAAACATGGTGTTCTGGGGCTGGGTCACCCCACAGAGATGAGGCAGTGATACCTCCACAGGCTCGCTaGGCTGCGCTACAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PQTWCSGAGSPHRDEAVIPPQAR*AALQEA
Trigger: TGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG...TATCACTGCCTCATCTCTGTGGGGTGACCCAGCCCCAGAACACCATGTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS GCA 90 bp ATCTCGGAGACGCTGTTGTGGCTCAGGTCAAGCGTGGTCAATGCCTaGCAAGTGGGGATGACGGCAGTCACAGGGCCTTCTAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: ISETLLWLRSSVVNA*QVGMTAVTGPSRVV
Trigger: CACAACCCTAGAAGGCCCTGTGACTGCCGTCATCCCCACTTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACAGCGTCTCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS GCA 90 bp TCAGAGGGTTGTTCAGCAGAGACACGTGCTCCAGACACGGGAGGCTaGCTATGCTCCGGACCTCCTCCATCTGTTCGATCCTGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: SEGCSAETRAPDTGG*LCSGPPPSVRSCCP
Trigger: GGGACAACAGGATCGAACAGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAACAACCCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS GCA 90 bp ATGTGCTGGGGTGCAAAGCATGAGCGCAGGTCCGCGTGGAACTCGTaGAGGTTGGCGGCGTCCGAGATAATGAAGAGCGTGTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: MCWGAKHERRSAWNS*RLAASEIMKSVFSL
Trigger: CAGTGAGAACACGCTCTTCATTATCTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACCCCAGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 90 bp CCTGAAATCTCAGGGCGGGGCCTTGGGAGTGTGTGCGGGCAGCACTaGTCTCCAAAGGCACTACCTGCAGATTGTCCACAACCAGCAATC +
Preference number: 5 (lower is better)
Translates to: PEISGRGLGSVCGQH*SPKALPADCPQPAI
Trigger: GATTGCTGGTTGTGGACAATCTGCAGGTAGTGCCTTTGGAGACCAGTGCTGCCCGCACACACTCCCAAGGCCCCGCCCTGAGATTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS-3UTR CAA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACTGCCCGAGGTCGGTCTaGGCATCCCCACTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADCPRSV*ASPLAH
Trigger: GTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCA...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CTACAGTCATATGGTACCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCATCTCGGAGACGCTGTaGTGGCTCAGGTCAAGCGTG +
Preference number: 5 (lower is better)
Translates to: LQSYGTSTGSLGCATGGSISETL*WLRSSV
Trigger: CACGCTTGACCTGAGCCACAACAGCGTCTCCGAGAT...GCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGGTACCATATGACTGTAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp CACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGACAGGCTGTACAGGTGCTGCAGATaGTCCACAACCAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: HKSLLPCPSRRQAGHDRLYRCCR*STTSNP
Trigger: TGGATTGCTGGTTGTGGACAATCTGCAGCACCTGTA...CAGCCTGTCGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCAGACTCTCTAGGAGGTaGCCTGCCAGGTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: QQTRHWCARLYHLWEADSRLSRR*PARFKV
Trigger: GACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTCT...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCATCTGTTCGATCCTGTaGTCCCGGAGATCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILICSIL*SRRSRL
Trigger: CAACCTGGATCTCCGGGACAACAGGATCGAACAGAT...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTCATGATGCTCAGAGGGTaGTTCAGCAGAGACACGTGC +
Preference number: 5 (lower is better)
Translates to: AGRAAEHSAPQPTLPLILMMLRG*FSRDTC
Trigger: GCACGTGTCTCTGCTGAACAACCCTCTGAGCATCAT...GAGGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp TGGGAGGCTGACAGCACACCGACAGCCCTGAGGGGCCCGGCATTCTCACTCCCAAACGAACATGATTCCTaGGTTAGAGAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: WEADSTPTALRGPAFSLPNEHDS*VREDGL
Trigger: CAGCCCATCCTCTCTAACCAAGGAATCATGTTCGTT...TGGGAGTGAGAATGCCGGGCCCCTCAGGGCTGTCGGTGTGCTGTCAGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGGGGTTGAAGTCGGCCTaGATGACGTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LENTKACCPAPVGVRLDTGLKSA*MTLRCW
Trigger: CCAGCACCTCAACGTCATCAAGGCCGACTTCAACCC...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CTCCCCTCTTCCGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTGCTTCAACATACACGATTACCTaGGTTAGAGAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LPSSVGAGPADTLMRPASTYTIT*VREDGL
Trigger: CAGCCCATCCTCTCTAACCAAGGTAATCGTGTATGT...TGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACGGAAGAGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CAA 90 bp CTGCTGGGAGGGCTGCTGAGCATTCTGCACCACAGCCGACTCTCCCTCTCATCCTGGGCATCAGAGCAATaGGGAGTCCTCACCAAGCAA +
Preference number: 5 (lower is better)
Translates to: LLGGLLSILHHSRLSLSSWASEQ*GVLTKQ
Trigger: TTGCTTGGTGAGGACTCCCAATTGCTCTGATGCCCA...GGATGAGAGGGAGAGTCGGCTGTGGTGCAGAATGCTCAGCAGCCCTCCCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS TCA 90 bp TCACCTCCAGCCCTGGGGTCTGGTAGAACACCACCGAGGACCACATaGGGTGCCTCAGCTCCTCGTTTTCAACCTCAGCAATGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SPPALGSGRTPPRTT*GASAPRFQPQQCCC
Trigger: ACAGCAGCATTGCTGAGGTTGAAAACGAGGAGCTGAGGCACCTCATGTGGTCCTCGGTGGTGTTCTACCAGACCCCAGGGCTGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp ATGCCACAGCACAGTGGCACCCCTGCAGACAGTTGGGGTGGGCGTTaGAAACATGGCTGTCCACCTTCAGGACGGAGGTGCATCATCATG +
Preference number: 5 (lower is better)
Translates to: MPQHSGTPADSWGGR*KHGCPPSGRRCIIM
Trigger: CATGATGATGCACCTCCGTCCTGAAGGTGGACAGCCATGTTTTCAACGCCCACCCCAACTGTCTGCAGGGGTGCCACTGTGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS GCA 90 bp CCAGAAACCTTAAGGTACTTAAGGCGACAGGTGAAGTCCAGGATGTaGCCGAGGTCGGTCTTGGCATCCCCACTGGCGCACGTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PETLRYLRRQVKSRM*PRSVLASPLAHVGF
Trigger: AAAGCCCACGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCACATCCTGGACTTCACCTGTCGCCTTAAGTACCTTAAGGTTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 90 bp TGCAGGTTGGCGGCGTCCGAGATAATGAAGAGCGTGTTCTCACTGTaGCGTACCTTGAGCACCAGACACAGCTCCGGCATGAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: CRLAASEIMKSVFSL*RTLSTRHSSGMRKP
Trigger: TGGCTTCCTCATGCCGGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTGAGAACACGCTCTTCATTATCTCGGACGCCGCCAACCTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp GGTTGTTCAGCAGAGACACGTGCTCCAGACACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCTGCAAGGTATGAGTTCCATCCCCTT +
Preference number: 5 (lower is better)
Translates to: GCSAETRAPDTGGCL*SGPPPSARYEFHPL
Trigger: AAGGGGATGGAACTCATACCTTGCAGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474188.1
CDS-3UTR CAA 90 bp CCTCCACAGGCTCGCTTGGCTGCGCTACAGGAGGCAGCGTCAGGGAAGCTTTCTTACAGGTGCTGCAGATaGTCCACAACCAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: PPQARLAALQEAASGKLSYRCCR*STTSNP
Trigger: TGGATTGCTGGTTGTGGACAATCTGCAGCACCTGTA...AGAAAGCTTCCCTGACGCTGCCTCCTGTAGCGCAGCCAAGCGAGCCTGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACATCTGTTCGATCCTGTaGTCCCGGAGATCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHICSIL*SRRSRL
Trigger: CAACCTGGATCTCCGGGACAACAGGATCGAACAGAT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACATGATGCTCAGAGGGTaGTTCAGCAGAGACACGTGC +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHMMLRG*FSRDTC
Trigger: GCACGTGTCTCTGCTGAACAACCCTCTGAGCATCAT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCAGAGTGCCCCTCTGCCTTGGCTTTCTGAATaGCTTTCAGCACTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GHVQKSSDGGDRLQSAPLPWLSE*LSALPQ
Trigger: CTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGG...CAGAGGGGCACTCTGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACTCTGGGTTGCTCAGTTaGGACTTGACCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHSGLLS*DLTSLA
Trigger: AGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGA...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCCCTTCTTCTCTGGGTaGCTCAGTTTGGACTTGACC +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHPFFSG*LSLDLT
Trigger: GGTCAAGTCCAAACTGAGCAACCCAGAGAAGAAGGG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGCGGCATGTTCTGGGCTaGCACCACCAACAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWRHVLG*HHQQLL
Trigger: CAGGAGCTGTTGGTGGTGCAAGCCCAGAACATGCCG...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTTGTGGGTGCCACGGTaGGGCATGGGGTTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWLWVPR*GMGLKS
Trigger: CGACTTCAACCCCATGCCCAACCGTGGCACCCACAA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGTGGCTCAGCCATCTTTaGGGCCACAGTGAACGTCAG +
Preference number: 5 (lower is better)
Translates to: LENTKACCPAPVGVRLDTWLSHL*GHSERQ
Trigger: CTGACGTTCACTGTGGCCCAAAAGATGGCTGAGCCA...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCTCTGCGGCGGCTCTTaGGCAAACTCGGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADLCGGS*ANSGSG
Trigger: CCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGAG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCAGCAGGAATCACGCTaGGTGCTGGCAGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVQQESR*VLAAPG
Trigger: ACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS GCA 90 bp TCAGAGGGTTGTTCAGCAGAGACACGTGCTCCAGACACGGGAGGCTaGCTATGCTCCGGACCTCCTCCATCTGCAAGGTATGAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: SEGCSAETRAPDTGG*LCSGPPPSARYEFH
Trigger: ATGGAACTCATACCTTGCAGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAACAACCCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474188.1
CDS-3UTR CAA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGCTTCCTTCATCGAGGTaGCTGAGAAGCGGACACTCA +
Preference number: 5 (lower is better)
Translates to: LENTKACCPAPVGVRLDTLPSSR*LRSGHS
Trigger: TGAGTGTCCGCTTCTCAGCAACCTCGATGAAGGAAG...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGATCTCGGAGACGCTGTaGTGGCTCAGGTCAAGCGTG +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWISETL*WLRSSV
Trigger: CACGCTTGACCTGAGCCACAACAGCGTCTCCGAGAT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCCCTCCTCCCGCTGGTaGGCAGCCTCGATCCAGGCA +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAPSSRW*AASIQA
Trigger: TGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGGG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGAAGCACCACAGCACCTaGAGGATGCGGATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWKHHST*RMRMCS
Trigger: GGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCTT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTCACTGTGCCGTACCTaGAGCACCAGACACAGCTCC +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWSLCRT*STRHSS
Trigger: GGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTGA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCATCGGCCTTGATGACGTaGAGGTGCTGGGGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPSALMT*RCWGVS
Trigger: GCTCACGCCCCAGCACCTCAACGTCATCAAGGCCGA...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACGGACCAAAGCTGAAGTaGAGGCCTCTGCTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADGPKLK*RPLLGP
Trigger: CGGCCCCAGCAGAGGCCTCAACTTCAGCTTTGGTCC...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGGACAGACTGCATCTCATCCTCCGATGTaGCAGTTGCAGCCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: VQIWRPCPEVQRWRGQTASHPPM*QLQPVF
Trigger: AAACACGGGCTGCAACTGCAACATCGGAGGATGAGA...TGCAGTCTGTCCCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS TCA 90 bp GGCCACTCAGACTCTCTAGGAGGTTGCCTGCCAGGTTTAAGGTCTTaGTGTTCCCCAGCTTGGTGTGAAGCCCTTCCAAGGAGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GHSDSLGGCLPGLRS*CSPAWCEALPRRRA
Trigger: AGCTCTCCTCCTTGGAAGGGCTTCACACCAAGCTGGGGAACATCAAGACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTCTGAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS TCA 90 bp GGACCTCCTCCATCTGTTCGATCCTGTTGTCCCGGAGATCCAGGTTaGCCAGTGAGTAGAGCTTGTGCAGGCCACTCAGACTCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: GPPPSVRSCCPGDPG*PVSRACAGHSDSLG
Trigger: TCCTAGAGAGTCTGAGTGGCCTGCACAAGCTCTACTCACTGGTCAACCTGGATCTCCGGGACAACAGGATCGAACAGATGGAGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CCA 90 bp TTTGGGATCAGTTTCACAGACTCGTCGATCTCGGAGACGCTGTTGTaGCTCAGGTCAAGCGTGGTCAATGCCTGCCAAGTGGGGATGACG +
Preference number: 5 (lower is better)
Translates to: FGISFTDSSISETLL*LRSSVVNACQVGMT
Trigger: CGTCATCCCCACTTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACAGCGTCTCCGAGATCGACGAGTCTGTGAAACTGATCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS-3UTR CAA 90 bp CAGCAGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCCCAGGAACTCAATCTTaGGGATCAGTTTCACAGACT +
Preference number: 5 (lower is better)
Translates to: QQTRHWCARLYHLWEADSPGTQS*GSVSQT
Trigger: AGTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGG...GCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTAGAGAACACAAAAGCCTGCTGCCCTGCCCCAGTAGGCGTCAGGCTGGACACGTACAGGTGCTGCAGATaGTCCACAACCAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: LENTKACCPAPVGVRLDTYRCCR*STTSNP
Trigger: TGGATTGCTGGTTGTGGACAATCTGCAGCACCTGTA...CGTGTCCAGCCTGACGCCTACTGGGGCAGGGCAGCAGGCTTTTGTGTTCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACAAACATGGTGATGATGCTCAGAGGGTaGTTCAGCAGAGACACGTGC +
Preference number: 5 (lower is better)
Translates to: FHGSTGTEMAHLGPTNMVMMLRG*FSRDTC
Trigger: GCACGTGTCTCTGCTGAACAACCCTCTGAGCATCAT...CACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACAACGAACATGATTCCTaGGTTAGAGAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHNEHDS*VREDGL
Trigger: CAGCCCATCCTCTCTAACCAAGGAATCATGTTCGTT...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAGGCACACGGCTGAGCTaGAAGCTGTTGCGGTTGCGA +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPGTRLS*KLLRLR
Trigger: TCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCC...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCACAAAGTACACAGCCTaGGTGGAGAGCAGCACGCAG +
Preference number: 5 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVTKYTA*VESSTQ
Trigger: CTGCGTGCTGCTCTCCACCAAGGCTGTGTACTTTGT...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCTCTGCGGCGGCTCTTaGGCAAACTCGGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSALCGGS*ANSGSG
Trigger: CCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGAG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCACGGGCTCTCCCACTaGTCTGGATCAGGGGAGACC +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCIHGLSH*SGSGET
Trigger: GGTCTCCCCTGATCCAGACAAGTGGGAGAGCCCGTG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACAGCAGGAATCACGCTaGGTGCTGGCAGCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPQQESR*VLAAPG
Trigger: ACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp CACGGGAGGCTGCCTATGCTCCGGACCTCCTCCATCTGCAAGGTATaGGTTCCATCCCCTTTGGTCCCTTCTCTTAACACTTCAGCAACA +
Preference number: 5 (lower is better)
Translates to: HGRLPMLRTSSICKV*VPSPLVPSLNTSAT
Trigger: TGTTGCTGAAGTGTTAAGAGAAGGGACCAAAGGGGATGGAACTCATACCTTGCAGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474188.1
CDS CCA 90 bp GGGACATGCCCACAGCTTCCACAAGGAGACATGGGAAGCCCCTCTTaGCTCACCAATGAATCCGTATGCTTCAAGGCAGAGAGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: GTCPQLPQGDMGSPS*LTNESVCFKAERKR
Trigger: TCTCTTCCTCTCTGCCTTGAAGCATACGGATTCATTGGTGAGCCAAGAGGGGCTTCCCATGTCTCCTTGTGGAAGCTGTGGGCATGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS-3UTR CAA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACATCTCGGAGACGCTGTaGTGGCTCAGGTCAAGCGTG +
Preference number: 5 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADISETL*WLRSSV
Trigger: CACGCTTGACCTGAGCCACAACAGCGTCTCCGAGAT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp AGACACGACACTGGTGTGCACGGCTGTACCACCTGTGGGAGGCTGACAGCACACCCAGGAACTCAATCTTaGGGATCAGTTTCACAGACT +
Preference number: 5 (lower is better)
Translates to: RHDTGVHGCTTCGRLTAHPGTQS*GSVSQT
Trigger: AGTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGG...GTGTGCTGTCAGCCTCCCACAGGTGGTACAGCCGTGCACACCAGTGTCGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTCCATGGGTCCACAGGGACAGAGATGGCCCATCTTGGCCCCACAAACATGGTGTACAGGTGCTGCAGATaGTCCACAACCAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: FHGSTGTEMAHLGPTNMVYRCCR*STTSNP
Trigger: TGGATTGCTGGTTGTGGACAATCTGCAGCACCTGTA...CACCATGTTTGTGGGGCCAAGATGGGCCATCTCTGTCCCTGTGGACCCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CAA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCGCCAGGTTTAAGGTCTaGATGTTCCCCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVARFKV*MFPSLV
Trigger: CACCAAGCTGGGGAACATCAAGACCTTAAACCTGGC...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CTACAGGAGGCAGCGTCAGGGAAGCTTTCTCACCGTGATATAACCTCCCTGGCTATCTGTTCGATCCTGTaGTCCCGGAGATCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LQEAASGKLSHRDITSLAICSIL*SRRSRL
Trigger: CAACCTGGATCTCCGGGACAACAGGATCGAACAGAT...AGCCAGGGAGGTTATATCACGGTGAGAAAGCTTCCCTGACGCTGCCTCCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGATGATGCTCAGAGGGTaGTTCAGCAGAGACACGTGC +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWMMLRG*FSRDTC
Trigger: GCACGTGTCTCTGCTGAACAACCCTCTGAGCATCAT...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCTCTGGGTTGCTCAGTTaGGACTTGACCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVSGLLS*DLTSLA
Trigger: AGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGA...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTCGGGCTCCAGACAGTAAAGTCACAAGCCCGGCTTCCTGTAACCAGGAGCCAATCTGGGTTGCTCAGTTaGGACTTGACCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: FGLQTVKSQARLPVTRSQSGLLS*DLTSLA
Trigger: AGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGA...TTGGCTCCTGGTTACAGGAAGCCGGGCTTGTGACTTTACTGTCTGGAGCCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CAA 90 bp GCCCGTGTTTTGGCAGTGGTGAGCATTTCACCTCCCCTTCCCGGTATCTTATCCCCCTTCTTCTCTGGGTaGCTCAGTTTGGACTTGACC +
Preference number: 5 (lower is better)
Translates to: ARVLAVVSISPPLPGILSPFFSG*LSLDLT
Trigger: GGTCAAGTCCAAACTGAGCAACCCAGAGAAGAAGGG...GGATAAGATACCGGGAAGGGGAGGTGAAATGCTCACCACTGCCAAAACACGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTCGGCCTTGATGACGTaGAGGTGCTGGGGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSASALMT*RCWGVS
Trigger: GCTCACGCCCCAGCACCTCAACGTCATCAAGGCCGA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGACCAAAGCTGAAGTaGAGGCCTCTGCTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGPKLK*RPLLGP
Trigger: CGGCCCCAGCAGAGGCCTCAACTTCAGCTTTGGTCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS GCA 90 bp CCCGTCAGCCGGAAATGCTGGTCGAAAAGCCCCACATTGACTGACTaGAGGTCACTAAGCTTTAGCACGAAGCACTGGGAGATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: PVSRKCWSKSPTLTD*RSLSFSTKHWEMWK
Trigger: TTTCCACATCTCCCAGTGCTTCGTGCTAAAGCTTAGTGACCTGCAGTCAGTCAATGTGGGGCTTTTCGACCAGCATTTCCGGCTGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS GCA 90 bp GGCTCCCACTCATCAAATTCTGAGGCTTCAGGAACAAGGACTTCCTaGATAAAAACATCTGTGTGGAGCACCACACTCGGGCCCTCACGC +
Preference number: 5 (lower is better)
Translates to: GSHSSNSEASGTRTS*IKTSVWSTTLGPSR
Trigger: GCGTGAGGGCCCGAGTGTGGTGCTCCACACAGATGTTTTTATGCAGGAAGTCCTTGTTCCTGAAGCCTCAGAATTTGATGAGTGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481211.1
CDS CCA 90 bp TCTGAATTGCTTTCAGCACTTCCACAGTGTCCAGCTCCTTCTCTGTaGTCACTGTGTCATCCAGACAGACCTCTGAGGCCCTCTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SELLSALPQCPAPSL*SLCHPDRPLRPSLR
Trigger: TCGGAGAGAGGGCCTCAGAGGTCTGTCTGGATGACACAGTGACCACAGAGAAGGAGCTGGACACTGTGGAAGTGCTGAAAGCAATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CCA 90 bp TCTGAGGCTTCAGGAACAAGGACTTCCTGCATAAAAACATCTGTGTaGAGCACCACACTCGGGCCCTCACGCAACACTCACTGGGAACAC +
Preference number: 5 (lower is better)
Translates to: SEASGTRTSCIKTSV*STTLGPSRNTHWEH
Trigger: GTGTTCCCAGTGAGTGTTGCGTGAGGGCCCGAGTGTGGTGCTCCACACAGATGTTTTTATGCAGGAAGTCCTTGTTCCTGAAGCCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481211.1
CDS-3UTR CAA 90 bp AAGCAAAATGGGCAATCATCCTGGCACCTAACCCCATCGCTCCACGCTCAGGAAGCCAGGTTTAAGGTCTaGATGTTCCCCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: KQNGQSSWHLTPSLHAQEARFKV*MFPSLV
Trigger: CACCAAGCTGGGGAACATCAAGACCTTAAACCTGGC...TTCCTGAGCGTGGAGCGATGGGGTTAGGTGCCAGGATGATTGCCCATTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAAGCACCACAGCACCTaGAGGATGCGGATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCIKHHST*RMRMCS
Trigger: GGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCTT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCACTGTGCCGTACCTaGAGCACCAGACACAGCTCC +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCISLCRT*STRHSS
Trigger: GGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCGGTTGGGCATGGGGTaGAAGTCGGCCTTGATGACG +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSARLGMG*KSALMT
Trigger: CGTCATCAAGGCCGACTTCAACCCCATGCCCAACCG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCACTGAGCTTGAAGCTGTaGCGGTTGCGACAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPLSLKL*RLRQLW
Trigger: CCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAG...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGCACACGGCTGAGCTaGAAGCTGTTGCGGTTGCGA +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGTRLS*KLLRLR
Trigger: TCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACAAAGTACACAGCCTaGGTGGAGAGCAGCACGCAG +
Preference number: 5 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADTKYTA*VESSTQ
Trigger: CTGCGTGCTGCTCTCCACCAAGGCTGTGTACTTTGT...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACACGACACTGGTCGAAAAGCCCCACATaGACTGACTGCAGGTCACTA +
Preference number: 5 (lower is better)
Translates to: DPQCHVLTTVPQQQTRHWSKSPT*TDCRSL
Trigger: TAGTGACCTGCAGTCAGTCAATGTGGGGCTTTTCGA...CCAGTGTCGTGTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCATGGCTCAGCCATCTTTaGGGCCACAGTGAACGTCAG +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPWLSHL*GHSERQ
Trigger: CTGACGTTCACTGTGGCCCAAAAGATGGCTGAGCCA...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGATCTCCGAGGATGCCTaGGTTAGAGAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGISEDA*VREDGL
Trigger: CAGCCCATCCTCTCTAACCAAGGCATCCTCGGAGAT...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420808.2
CDS CCA 90 bp CATTTATCTCATAGAAGTGAAAATGCAAGAAGTGGGCCAGTACTCTaGGGGTCACGCCAGGGAAGGCAGCCAGGAGCTTCTGGAGGTAGA +
Preference number: 5 (lower is better)
Translates to: HLSHRSENARSGPVL*GSRQGRQPGASGGR
Trigger: TCTACCTCCAGAAGCTCCTGGCTGCCTTCCCTGGCGTGACCCCCAGAGTACTGGCCCACTTCTTGCATTTTCACTTCTATGAGATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CCA 90 bp TCAGGTCAAGTCTCCAAAGATAGGGGCCTGACACTAATGGCAGGATaGGCCTTCCAACCCAAACTACCCAGTTCTGCAAGTCACTCTGAC +
Preference number: 5 (lower is better)
Translates to: SGQVSKDRGLTLMAG*AFQPKLPSSASHSD
Trigger: GTCAGAGTGACTTGCAGAACTGGGTAGTTTGGGTTGGAAGGCCCATCCTGCCATTAGTGTCAGGCCCCTATCTTTGGAGACTTGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS-3UTR CAA 90 bp GAGAAAGTCAGACCCACAGTGTCACGTGTTAACAACGGTCCCACAACAGCAGACCTTCCTTCATCGAGGTaGCTGAGAAGCGGACACTCA +
Preference number: 5 (lower is better)
Translates to: EKVRPTVSRVNNGPTTADLPSSR*LRSGHS
Trigger: TGAGTGTCCGCTTCTCAGCAACCTCGATGAAGGAAG...GTCTGCTGTTGTGGGACCGTTGTTAACACGTGACACTGTGGGTCTGACTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GATAGTGGGCAGACGAATGGGCCTGGTCTTCCATGGGTCCACAGGGACAGAGATCCAGGAACTCAATCTTaGGGATCAGTTTCACAGACT +
Preference number: 5 (lower is better)
Translates to: DSGQTNGPGLPWVHRDRDPGTQS*GSVSQT
Trigger: AGTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGG...ATCTCTGTCCCTGTGGACCCATGGAAGACCAGGCCCATTCGTCTGCCCACTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488380.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATCTGTTCGATCCTGTaGTCCCGGAGATCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPICSIL*SRRSRL
Trigger: CAACCTGGATCTCCGGGACAACAGGATCGAACAGAT...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGAATAGAGAATACAGGCAGCAGGAATCACGCTTGGTGCTGGCAGCTCCAGGTCCCTTGGCTTTCTGAATaGCTTTCAGCACTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GIENTGSRNHAWCWQLQVPWLSE*LSALPQ
Trigger: CTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGG...GACCTGGAGCTGCCAGCACCAAGCGTGATTCCTGCTGCCTGTATTCTCTATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp TTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCAGCGATGGCGGGTCTGGGTTGCTCAGTTaGGACTTGACCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFKRCKSGGHVQKSSDGGSGLLS*DLTSLA
Trigger: AGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGA...CCCGCCATCGCTGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGGGTTGAAGTCGGCCTaGATGACGTTGAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAGLKSA*MTLRCW
Trigger: CCAGCACCTCAACGTCATCAAGGCCGACTTCAACCC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS GCA 90 bp CTTCCCTATACCTGTGGCTCCTTTCTCAAAGAGCTCTTCAGCCAGTaGCGCGGTGATGCCATTTATCTCCTGAAATGTCTCCTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: LPYTCGSFLKELFSQ*RGDAIYLLKCLLQS
Trigger: GCTTTGGAGGAGACATTTCAGGAGATAAATGGCATCACCGCGGCACTGGCTGAAGAGCTCTTTGAGAAAGGAGCCACAGGTATAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTAGACTCTCTAGGAGGTaGCCTGCCAGGTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCIRLSRR*PARFKV
Trigger: GACCTTAAACCTGGCAGGCAACCTCCTAGAGAGTCT...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTTTGAAGCTGTTGCGGTaGCGACAGTTGTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSALKLLR*RQLWVP
Trigger: TGGCACCCACAACTGTCGCAACCGCAACAGCTTCAA...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp GGGAGTCTTCACCACCCTTCTTCTCTGGGTTGCTCAGTTTGGACTTaGCCTCCTTGGCTTTCTGAATTGCTTTCAGCACTTCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: GSLHHPSSLGCSVWT*PPWLSELLSALPQC
Trigger: ACACTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGAGAAGAAGGGTGGTGAAGACTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS-3UTR CAA 90 bp CTCCACGCTCAGGAATTCTCTTCCACATCTCACAGGTGTGACCTCAGTGTGCTGCCAGGAACTCAATCTTaGGGATCAGTTTCACAGACT +
Preference number: 5 (lower is better)
Translates to: LHAQEFSSTSHRCDLSVLPGTQS*GSVSQT
Trigger: AGTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGG...CAGCACACTGAGGTCACACCTGTGAGATGTGGAAGAGAATTCCTGAGCGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTGCCAGGTTTAAGGTCTaGATGTTCCCCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAARFKV*MFPSLV
Trigger: CACCAAGCTGGGGAACATCAAGACCTTAAACCTGGC...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCTGCTCCCTTCTTCTCTGGGTaGCTCAGTTTGGACTTGACC +
Preference number: 5 (lower is better)
Translates to: DLHFEEQYGVGASNVHSAPFFSG*LSLDLT
Trigger: GGTCAAGTCCAAACTGAGCAACCCAGAGAAGAAGGG...AGCAGAATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTTCGAAAAGCCCCACATaGACTGACTGCAGGTCACTA +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCISKSPT*TDCRSL
Trigger: TAGTGACCTGCAGTCAGTCAATGTGGGGCTTTTCGA...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp TTCTTCTCTGGGTTGCTCAGTTTGGACTTGACCTCCTTGGCTTTCTaGATTGCTTTCAGCACTTCCACAGTGTCCAGCTCCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FFSGLLSLDLTSLAF*IAFSTSTVSSSFSV
Trigger: CACAGAGAAGGAGCTGGACACTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS-3UTR CAA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACTTCCTTCATCGAGGTaGCTGAGAAGCGGACACTCA +
Preference number: 5 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPLPSSR*LRSGHS
Trigger: TGAGTGTCCGCTTCTCAGCAACCTCGATGAAGGAAG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS-3UTR CAA 90 bp GGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCAATGTGCATTCCTTGGCTTTCTGAATaGCTTTCAGCACTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GETSTLKNNMGWELPMCIPWLSE*LSALPQ
Trigger: CTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGG...AATGCACATTGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 90 bp TCCAAAGGCACTACCTGCAGATTGTCCACAACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCAATCTTTGGGATCAGTTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: SKGTTCRLSTTSNPL*LRSRNSIFGISFTD
Trigger: GTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGTTGTGGACAATCTGCAGGTAGTGCCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS TCA 90 bp AGGTTATACAGGTGCTGCAGATTGTCCACAACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCAATCTTTGGGATCAGTTTCACAGAC +
Preference number: 5 (lower is better)
Translates to: RLYRCCRLSTTSNPL*LRSRNSIFGISFTD
Trigger: GTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGTTGTGGACAATCTGCAGCACCTGTATAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
CDS-3UTR CAA 90 bp TCTGGATCAGGGGAGACCTCCACTTTGAAGAACAATATGGGGTGGGAGCTTCCATCTCCACCAAGCTTCTaGAGTTTTTCCCAATTATCT +
Preference number: 5 (lower is better)
Translates to: SGSGETSTLKNNMGWELPSPPSF*SFSQLS
Trigger: AGATAATTGGGAAAAACTCAAGAAGCTTGGTGGAGA...TGGAAGCTCCCACCCCATATTGTTCTTCAAAGTGGAGGTCTCCCCTGATCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS-3UTR CAA 90 bp CCACTGCAGTTTTATTTAAGAGGTGCAAATCTGGAGGCCATGTCCAGAAGTCCACCTTGGCTTTCTGAATaGCTTTCAGCACTTCCACAG +
Preference number: 5 (lower is better)
Translates to: PLQFYLRGANLEAMSRSPPWLSE*LSALPQ
Trigger: CTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGG...TGGACTTCTGGACATGGCCTCCAGATTTGCACCTCTTAAATAAAACTGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420808.2
ENST00000488380.5
CDS GCA 72 bp CCTTGGCCGGCTCGGCTTCCCGCTCGGGCCCGAAGGTaGGCGCGGTCGCCATGTTCGGGTCTCCGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: PWPARLPARARR*ARSPCSGLRRH
Trigger: GTGGCGGCGGAGACCCGAACATGGCGACCGCGCGCACCTTCGGGCCCGAGCGGGAAGCCGAGCCGGCCAAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
CDS GCA 72 bp AGCTCGATGATGGCGCTGCCCCGCAGGCTGGCGACGTaGCGGAGCGACGGGCAGGCAGGCAAGTGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: SSMMALPRRLAT*RSDGQAGKCEG
Trigger: CCCCTCGCACTTGCCTGCCTGCCCGTCGCTCCGGCACGTCGCCAGCCTGCGGGGCAGCGCCATCATCGAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CTGCGCTCGGCAGGCTGGCCATCCGCAAAGGAGCCCTaGGGGCTGCCTCCCGTCCCGGGGGTCTTGGCGATG +
Preference number: 6 (lower is better)
Translates to: LRSAGWPSAKEP*GLPPVPGVLAM
Trigger: CATCGCCAAGACCCCCGGGACGGGAGGCAGCCCCCAGGGCTCCTTTGCGGATGGCCAGCCTGCCGAGCGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp TGTCCACAAGCTCCGAGCCCACGACGCGCGCTTCCTTaGCCGGCTCGGCTTCCCGCTCGGGCCCGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: CPQAPSPRRALP*PARLPARARRC
Trigger: GCACCTTCGGGCCCGAGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGTGGGCTCGGAGCTTGTGGACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
CDS CAA 72 bp GTGTCCACAAGCTCCGAGCCCACGACGCGCGCTTCCTaGGCCGGCTCGGCTTCCCGCTCGGGCCCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: VSTSSEPTTRAS*AGSASRSGPKV
Trigger: CACCTTCGGGCCCGAGCGGGAAGCCGAGCCGGCCAAGGAAGCGCGCGTCGTGGGCTCGGAGCTTGTGGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
CDS CCA 72 bp TCCTCCTCGCCCTGTTCACCCTGGCCCTCCTCCCGCTaGTTGGCAGCCTCGATCCAGGCAGGCAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SSSPCSPWPSSR*LAASIQAGSCR
Trigger: GCGGCAGCTGCCTGCCTGGATCGAGGCTGCCAACCAGCGGGAGGAGGGCCAGGGTGAACAGGGCGAGGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS TCA 72 bp GGCCTCAGAGGGCGCGCAGCAGGAGCGCCGCACGGCTaGACAGAGTGTGCAGCTGGCCCACTCGATGTTGCC +
Preference number: 6 (lower is better)
Translates to: GLRGRAAGAPHG*TECAAGPLDVA
Trigger: GGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCCTGCTGCGCGCCCTCTGAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp GGACACGACAGGCTGGCTGTGGCCTGGGCTAGCCGGTaGGCTCGACAGGCAGCTCACGGCCACACAGGGCCT +
Preference number: 6 (lower is better)
Translates to: GHDRLAVAWASR*ARQAAHGHTGP
Trigger: AGGCCCTGTGTGGCCGTGAGCTGCCTGTCGAGCTCACCGGCTAGCCCAGGCCACAGCCAGCCTGTCGTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp TCCCGCTGGTTGGCAGCCTCGATCCAGGCAGGCAGCTaGCGCTCGATGGCCTGCCGGATCAGTGTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SRWLAASIQAGS*RSMACRISVLR
Trigger: CCTGAGCACACTGATCCGGCAGGCCATCGAGCGGCAGCTGCCTGCCTGGATCGAGGCTGCCAACCAGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS CCA 72 bp CCAGGATGTGCCCGAGGTCGGTCTTGGCATCCCCACTaGCGCACGTGGGCTTTCCCTGCTGCAGCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: PGCARGRSWHPH*RTWAFPAAAAP
Trigger: CGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCACATCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS CCA 72 bp GACTTCACGGCCCTGGCTGGCTCTAGCCGGGCCACCTaGCACCTCCCCAAAGTGGTCCAGGGTGACACTGCC +
Preference number: 6 (lower is better)
Translates to: DFTALAGSSRAT*HLPKVVQGDTA
Trigger: GGCAGTGTCACCCTGGACCACTTTGGGGAGGTGCCAGGTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CTGGGGACAAACACCTGCCACTGGACTTCACGGCCCTaGCTGGCTCTAGCCGGGCCACCTGGCACCTCCCCA +
Preference number: 6 (lower is better)
Translates to: LGTNTCHWTSRP*LALAGPPGTSP
Trigger: TGGGGAGGTGCCAGGTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CCAGTAGGCGTCAGGCTGGACACGACAGGCTGGCTGTaGCCTGGGCTAGCCGGTGAGCTCGACAGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: PVGVRLDTTGWL*PGLAGELDRQL
Trigger: GAGCTGCCTGTCGAGCTCACCGGCTAGCCCAGGCCACAGCCAGCCTGTCGTGTCCAGCCTGACGCCTACTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp GCGAGGGGATCTGATTCTCCTCCGAGGTGGCCTGGATaGGGTGCTCACTCGGGTACTGGGCAGGGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: ARGSDSPPRWPG*GAHSGTGQGPR
Trigger: CCGAGGCCCCTGCCCAGTACCCGAGTGAGCACCTCATCCAGGCCACCTCGGAGGAGAATCAGATCCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp GCCTCGATCCAGGCAGGCAGCTGCCGCTCGATGGCCTaGCGGATCAGTGTGCTCAGGCGCTGGATGAAGTCC +
Preference number: 6 (lower is better)
Translates to: ASIQAGSCRSMA*RISVLRRWMKS
Trigger: GGACTTCATCCAGCGCCTGAGCACACTGATCCGGCAGGCCATCGAGCGGCAGCTGCCTGCCTGGATCGAGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS GCA 72 bp GCGCGCAGCAGGAGCGCCGCACGGCTGAACAGAGTGTaGAGCTGGCCCACTCGATGTTGCCTGAGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: ARSRSAARLNRV*SWPTRCCLSSP
Trigger: GGGACTACTCAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCCTGCTGCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp TGCTGCTTGGTCCTCGCTCCACTCCTCCCAGCCATGTaGCCTCAGGCTGGTGACTGGGCCGCTGACCCCGTA +
Preference number: 6 (lower is better)
Translates to: CCLVLAPLLPAM*PQAGDWAADPV
Trigger: TACGGGGTCAGCGGCCCAGTCACCAGCCTGAGGGCACATGGCTGGGAGGAGTGGAGCGAGGACCAAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS CCA 72 bp TCCTCCTCCTCATCCTCCTCCTCGCCCTGTTCACCCTaGCCCTCCTCCCGCTGGTTGGCAGCCTCGATCCAG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSPCSP*PSSRWLAASIQ
Trigger: CTGGATCGAGGCTGCCAACCAGCGGGAGGAGGGCCAGGGTGAACAGGGCGAGGAGGAGGATGAGGAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS CCA 72 bp AGCAGGAGCGCCGCACGGCTGAACAGAGTGTGCAGCTaGCCCACTCGATGTTGCCTGAGTAGTCCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: SRSAARLNRVCS*PTRCCLSSPRR
Trigger: CCGCCGGGGACTACTCAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCGTGCGGCGCTCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp TCTAGCACGTGGCCATCAGCAAAGGCGCCCCGAGGCTaGGTACAGCTGCGTGTGGGGTCCAGCAGCACGGTG +
Preference number: 6 (lower is better)
Translates to: SSTWPSAKAPRG*VQLRVGSSSTV
Trigger: CACCGTGCTGCTGGACCCCACACGCAGCTGTACCCAGCCTCGGGGCGCCTTTGCTGATGGCCACGTGCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp ACCCACACCCGGGCCGCTACCTCAGCAATGCTGCTGTaGAAGAGCTCGATGATGGCGCTGCCCCGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: THTRAATSAMLL*KSSMMALPRRL
Trigger: CAGCCTGCGGGGCAGCGCCATCATCGAGCTCTTCCACAGCAGCATTGCTGAGGTAGCGGCCCGGGTGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS CCA 72 bp GGCAGGAAGATGATCTGGCCAGACCCCGGCACCACCTaGACCTCCGGCTCGGCATGTTCTGGGCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: GRKMIWPDPGTT*TSGSACSGLGW
Trigger: CCACCCAAGCCCAGAACATGCCGAGCCGGAGGTCCAGGTGGTGCCGGGGTCTGGCCAGATCATCTTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488243.1
CDS CAA 90 bp CGTGTGGGGTCCAGCAGCACGGTGGAGAGCGGCACACGGCTGAGCTaGAAGCTGTTGCGGTTGCGACAGTTGTGGGTGCCACGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: RVGSSSTVESGTRLS*KLLRLRQLWVPRLG
Trigger: GCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTCCACCGTGCTGCTGGACCCCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp CGGAGCGACGGGCAGGCAGGCAAGTGCGAGGGGATCTaGTTCTCCTCCGAGGTGGCCTGGATGAGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: RSDGQAGKCEGI*FSSEVAWMRCS
Trigger: TGAGCACCTCATCCAGGCCACCTCGGAGGAGAATCAGATCCCCTCGCACTTGCCTGCCTGCCCGTCGCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp AGCAGTGCGTCAGGTAGCTGTCCCGCGTCAAGCACGTaGCCACCTGCATCGGGGTGGAACCCGTCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: SSASGSCPASST*PPASGWNPSAG
Trigger: TCCGGCTGACGGGTTCCACCCCGATGCAGGTGGTCACGTGCTTGACGCGGGACAGCTACCTGACGCACTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp TTTCCCTGCTGCAGCTGCTCCGTGACGGCATACAGCTaGAGGGGTCCAATGGCAAAGACCTCGCCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: FPCCSCSVTAYS*RGPMAKTSPAP
Trigger: GGGGGCCGGCGAGGTCTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 72 bp TCCCCACTGGCGCACGTGGGCTTTCCCTGCTGCAGCTaGTCCGTGACGGCATACAGCTGCAGGGGTCCAATG +
Preference number: 6 (lower is better)
Translates to: SPLAHVGFPCCS*SVTAYSCRGPM
Trigger: CATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 72 bp TTGGCATCCCCACTGGCGCACGTGGGCTTTCCCTGCTaGAGCTGCTCCGTGACGGCATACAGCTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: LASPLAHVGFPC*SCSVTAYSCRG
Trigger: ACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 72 bp CGGCTGAACAGAGTGTGCAGCTGGCCCACTCGATGTTaGCTGAGTAGTCCCCGGCGGCCGTCTGCACCATGC +
Preference number: 6 (lower is better)
Translates to: RLNRVCSWPTRC*LSSPRRPSAPC
Trigger: GCATGGTGCAGACGGCCGCCGGGGACTACTCAGGCAACATCGAGTGGGCCAGCTGCACACTCTGTTCAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp GGCAGGAAGATGATCTGGCCAGACCCCGGCACCACCTaGACCTCCGGCTCGGCATGTTCTGGGCTTGCACCA +
Preference number: 6 (lower is better)
Translates to: GRKMIWPDPGTT*TSGSACSGLAP
Trigger: TGGTGCAAGCCCAGAACATGCCGAGCCGGAGGTCCAGGTGGTGCCGGGGTCTGGCCAGATCATCTTCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp CGACAGGTGAAGTCCAGGATGTGCCCGAGGTCGGTCTaGGCATCCCCACTGGCGCACGTGGGCTTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: RQVKSRMCPRSV*ASPLAHVGFPC
Trigger: GCAGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCACATCCTGGACTTCACCTGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS TCA 72 bp GGTGCGGGATCTCGAAGACTGCGATGCCGAAGTCGGTaGGCACAAGGCAGGCGGCGAACTGGCGGATACTGC +
Preference number: 6 (lower is better)
Translates to: GAGSRRLRCRSR*AQGRRRTGGYC
Trigger: GCAGTATCCGCCAGTTCGCCGCCTGCCTTGTGCTCACCGACTTCGGCATCGCAGTCTTCGAGATCCCGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp CAGGGGGCAGCTGAGAGCCGGGAGTCTTCACCACCCTaGGGACGAGTGCTTGAGTCAGCCCGGGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: QGAAESRESSPP*GRVLESARERR
Trigger: TCTTCTCTCCCGGGCTGACTCAAGCACTCGTCCTCAGGGTGGTGAAGACTCCCGGCTCTCAGCTGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485765.5
CDS CCA 72 bp GTGACAAAGCGGTACCCCACGAGCAGCTCTAGCACGTaGCCATCAGCAAAGGCGCCCCGAGGCTGGGTACAG +
Preference number: 6 (lower is better)
Translates to: VTKRYPTSSSST*PSAKAPRGWVQ
Trigger: CTGTACCCAGCCTCGGGGCGCCTTTGCTGATGGCCACGTGCTAGAGCTGCTCGTGGGGTACCGCTTTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp GGTGGAGAGCAGCACGCAGGCAGTCACCTCCAGCCCTaGGGTCTGGTAGAACACCACCGAGGACCACATGAG +
Preference number: 6 (lower is better)
Translates to: GGEQHAGSHLQP*GLVEHHRGPHE
Trigger: CTCATGTGGTCCTCGGTGGTGTTCTACCAGACCCCAGGGCTGGAGGTGACTGCCTGCGTGCTGCTCTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
CDS CCA 72 bp TCTCTGCTCTCAGCACTGGGGACAAACACCTGCCACTaGACTTCACGGCCCTGGCTGGCTCTAGCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: SLLSALGTNTCH*TSRPWLALAGP
Trigger: TGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGGCAGGTGTTTGTCCCCAGTGCTGAGAGCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp TCGACAGGCAGCTCACGGCCACACAGGGCCTCCCACTaGCGAGCCAACAGCGAGATGAGCTTCTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: STGSSRPHRASH*RANSEMSFSLL
Trigger: GAGCAGAGAGAAGCTCATCTCGCTGTTGGCTCGCCAGTGGGAGGCCCTGTGTGGCCGTGAGCTGCCTGTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CCACTCCTCCCAGCCATGTGCCCTCAGGCTGGTGACTaGGCCGCTGACCCCGTATCCTTCCCTATACCTGTG +
Preference number: 6 (lower is better)
Translates to: PLLPAMCPQAGD*AADPVSFPIPV
Trigger: CACAGGTATAGGGAAGGATACGGGGTCAGCGGCCCAGTCACCAGCCTGAGGGCACATGGCTGGGAGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS CAA 72 bp GAGAGCGGCACACGGCTGAGCTTGAAGCTGTTGCGGTaGCGACAGTTGTGGGTGCCACGGTTGGGCATGGGG +
Preference number: 6 (lower is better)
Translates to: ESGTRLSLKLLR*RQLWVPRLGMG
Trigger: CCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp ACGGTGGAGAGCGGCACACGGCTGAGCTTGAAGCTGTaGCGGTTGCGACAGTTGTGGGTGCCACGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: TVESGTRLSLKL*RLRQLWVPRLG
Trigger: GCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTCCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp CTTCCACTGGCGTCTCCTCTGGGACCAAAGCTGAAGTaGAGGCCTCTGCTGGGGCCGGAGTCTTCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LPLASPLGPKLK*RPLLGPESSLG
Trigger: GCCCAGCGAAGACTCCGGCCCCAGCAGAGGCCTCAACTTCAGCTTTGGTCCCAGAGGAGACGCCAGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp TCCAGCAGCACGGTGGAGAGCGGCACACGGCTGAGCTTGAAGCTGTaGCGGTTGCGACAGTTGTGGGTGCCACGGTTGGGCATGGGGTTG +
Preference number: 6 (lower is better)
Translates to: SSSTVESGTRLSLKL*RLRQLWVPRLGMGL
Trigger: CAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTCCACCGTGCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp TACTTAAGGCGACAGGTGAAGTCCAGGATGTGCCCGAGGTCGGTCTaGGCATCCCCACTGGCGCACGTGGGCTTTCCCTGCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: YLRRQVKSRMCPRSV*ASPLAHVGFPCCSC
Trigger: GCAGCTGCAGCAGGGAAAGCCCACGTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCACATCCTGGACTTCACCTGTCGCCTTAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS CAA 90 bp AGCACGGTGGAGAGCGGCACACGGCTGAGCTTGAAGCTGTTGCGGTaGCGACAGTTGTGGGTGCCACGGTTGGGCATGGGGTTGAAGTCG +
Preference number: 6 (lower is better)
Translates to: STVESGTRLSLKLLR*RQLWVPRLGMGLKS
Trigger: CGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTCCACCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp CAGAGCCTGGAAGCAGGATGGGTTCTGAGCCCAACTGACTGCTGCTaGGTCCTCGCTCCACTCCTCCCAGCCATGTGCCCTCAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: QSLEAGWVLSPTDCC*VLAPLLPAMCPQAG
Trigger: ACCAGCCTGAGGGCACATGGCTGGGAGGAGTGGAGCGAGGACCAAGCAGCAGTCAGTTGGGCTCAGAACCCATCCTGCTTCCAGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS TCA 72 bp TGGCGCACGTGGGCTTTCCCTGCTGCAGCTGCTCCGTaGCGGCATACAGCTGCAGGGGTCCAATGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: WRTWAFPAAAAP*RHTAAGVQWQR
Trigger: TCTTTGCCATTGGACCCCTGCAGCTGTATGCCGTCACGGAGCAGCTGCAGCAGGGAAAGCCCACGTGCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS TCA 72 bp GCTACACAGCATGGCCATGTGCTGGGGTGCAAAGCATaGGCGCAGGTCCGCGTGGAACTCGTGCAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: ATQHGHVLGCKA*AQVRVELVQVG
Trigger: GCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACCCCAGCACATGGCCATGCTGTGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp GCGAGGGCGTGCGTTCCAGAGAGGACAGCACGACCATaGGGTGCTGGAGGAAGCAGTGCGTCAGGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: ARACVPERTARP*GAGGSSASGSC
Trigger: ACAGCTACCTGACGCACTGCTTCCTCCAGCACCTCATGGTCGTGCTGTCCTCTCTGGAACGCACGCCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp GCAGAGCCTGGAAGCAGGATGGGTTCTGAGCCCAACTaGCTGCTGCTTGGTCCTCGCTCCACTCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: AEPGSRMGSEPN*LLLGPRSTPPS
Trigger: GCTGGGAGGAGTGGAGCGAGGACCAAGCAGCAGTCAGTTGGGCTCAGAACCCATCCTGCTTCCAGGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS TCA 72 bp AACCCCTGGCCAATTCCCAAGGCTGCGTCAGTCTCCTaGAATCTCAGGGCGGGGCCTTGGGAGTGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: NPWPIPKAASVS*NLRAGPWECVR
Trigger: CCGCACACACTCCCAAGGCCCCGCCCTGAGATTTCAGGAGACTGACGCAGCCTTGGGAATTGGCCAGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS GCA 72 bp GGAGACGCTGTTGTGGCTCAGGTCAAGCGTGGTCAATaGCTGCCAAGTGGGGATGACGGCAGTCACAGGGCC +
Preference number: 6 (lower is better)
Translates to: GDAVVAQVKRGQ*LPSGDDGSHRA
Trigger: GGCCCTGTGACTGCCGTCATCCCCACTTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACAGCGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS GCA 72 bp TGTTGCCTGAGTAGTCCCCGGCGGCCGTCTGCACCATaGGCTTGTCACTGTAGACCAGGTAGACGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: CCLSSPRRPSAP*ACHCRPGRRGS
Trigger: GCTTCCCCGTCTACCTGGTCTACAGTGACAAGCGCATGGTGCAGACGGCCGCCGGGGACTACTCAGGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CGGCTGAGCTTGAAGCTGTTGCGGTTGCGACAGTTGTaGGTGCCACGGTTGGGCATGGGGTTGAAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: RLSLKLLRLRQL*VPRLGMGLKSA
Trigger: GGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CGTCCAGCCGGTACCTGTCTCTCTGCGGCGGCTCTTTaGCAAACTCGGGCAGTGGGTAGTGGACACAGTCCT +
Preference number: 6 (lower is better)
Translates to: RPAGTCLSAAAL*QTRAVGSGHSP
Trigger: AGGACTGTGTCCACTACCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGAGAGACAGGTACCGGCTGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp TGGGTGCCACGGTTGGGCATGGGGTTGAAGTCGGCCTaGATGACGTTGAGGTGCTGGGGCGTGAGCAACAGC +
Preference number: 6 (lower is better)
Translates to: WVPRLGMGLKSA*MTLRCWGVSNS
Trigger: GCTGTTGCTCACGCCCCAGCACCTCAACGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp TCCAGCAGCACGGTGGAGAGCGGCACACGGCTGAGCTaGAAGCTGTTGCGGTTGCGACAGTTGTGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: SSSTVESGTRLS*KLLRLRQLWVP
Trigger: TGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTCCACCGTGCTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp CTGTTGCGGTTGCGACAGTTGTGGGTGCCACGGTTGGGCATGGGGTaGAAGTCGGCCTTGATGACGTTGAGGTGCTGGGGCGTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: LLRLRQLWVPRLGMG*KSALMTLRCWGVSN
Trigger: GTTGCTCACGCCCCAGCACCTCAACGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp GAGAGCGGCACACGGCTGAGCTTGAAGCTGTTGCGGTTGCGACAGTaGTGGGTGCCACGGTTGGGCATGGGGTTGAAGTCGGCCTTGATG +
Preference number: 6 (lower is better)
Translates to: ESGTRLSLKLLRLRQ*WVPRLGMGLKSALM
Trigger: CATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGTGCCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp CAGCAGGATGCTGAGGGCTGGGGCCTTCTCTGGCTCAGCCATCTTTaGGGCCACAGTGAACGTCAGGTCCCCAATCTCCTCCTCACTGGG +
Preference number: 6 (lower is better)
Translates to: QQDAEGWGLLWLSHL*GHSERQVPNLLLTG
Trigger: CCCAGTGAGGAGGAGATTGGGGACCTGACGTTCACTGTGGCCCAAAAGATGGCTGAGCCAGAGAAGGCCCCAGCCCTCAGCATCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp CACAGTGGCACCCCTGCAGACAGTTGGGGTGGGCGTTaGAAACATGGCTGTCCACCTTCAGGACGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: HSGTPADSWGGR*KHGCPPSGRRC
Trigger: GCACCTCCGTCCTGAAGGTGGACAGCCATGTTTTCAACGCCCACCCCAACTGTCTGCAGGGGTGCCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS GCA 72 bp GGGATGATGCTCAGAGGGTTGTTCAGCAGAGACACGTaGTCCAGACACGGGAGGCTGCCTATGCTCCGGACC +
Preference number: 6 (lower is better)
Translates to: GMMLRGLFSRDT*SRHGRLPMLRT
Trigger: GGTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTGAACAACCCTCTGAGCATCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS GCA 72 bp AGCACAAGGCAGGCGGCGAACTGGCGGATACTGCCCTaGACATGGATCAGGAAGCACCACAGCACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: STRQAANWRILP*TWIRKHHSTLR
Trigger: CCTCAAGGTGCTGTGGTGCTTCCTGATCCATGTGCAGGGCAGTATCCGCCAGTTCGCCGCCTGCCTTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp GGTGCAAAGCATGAGCGCAGGTCCGCGTGGAACTCGTaGAGGTTGGCGGCGTCCGAGATAATGAAGAGCGTG +
Preference number: 6 (lower is better)
Translates to: GAKHERRSAWNS*RLAASEIMKSV
Trigger: CACGCTCTTCATTATCTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp CGTGGGGGCCGGGCCAGCAGACACGCTCATGAGACCTaGTTCACTCACTCATCTCCGAGGATGCCTTGGTTA +
Preference number: 6 (lower is better)
Translates to: RGGRASRHAHET*FTHSSPRMPWL
Trigger: TAACCAAGGCATCCTCGGAGATGAGTGAGTGAAGCAGGTCTCATGAGCGTGTCTGCTGGCCCGGCCCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420808.2
ENST00000485765.5
ENST00000489895.5
CDS GCA 72 bp GAAATGCAAACACCCAGGTCAGGCGCAGGCCTATGGTaGCAGCGTGGTGCAGAGCCTGGAAGCAGGATGGGT +
Preference number: 6 (lower is better)
Translates to: EMQTPRSGAGLW*QRGAEPGSRMG
Trigger: ACCCATCCTGCTTCCAGGCTCTGCACCACGCTGGCACCATAGGCCTGCGCCTGACCTGGGTGTTTGCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS GCA 72 bp TCTCCTGAAATCTCAGGGCGGGGCCTTGGGAGTGTGTaGGGGCAGCACTGGTCTCCAAAGGCACTACCTGCA +
Preference number: 6 (lower is better)
Translates to: SPEISGRGLGSV*GQHWSPKALPA
Trigger: TGCAGGTAGTGCCTTTGGAGACCAGTGCTGCCCGCACACACTCCCAAGGCCCCGCCCTGAGATTTCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CCA 72 bp ATGCCGAAGTCGGTGAGCACAAGGCAGGCGGCGAACTaGCGGATACTGCCCTGCACATGGATCAGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: MPKSVSTRQAAN*RILPCTWIRKH
Trigger: GTGCTTCCTGATCCATGTGCAGGGCAGTATCCGCCAGTTCGCCGCCTGCCTTGTGCTCACCGACTTCGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp ATGTGCTGGGGTGCAAAGCATGAGCGCAGGTCCGCGTaGAACTCGTGCAGGTTGGCGGCGTCCGAGATAATG +
Preference number: 6 (lower is better)
Translates to: MCWGAKHERRSA*NSCRLAASEIM
Trigger: CATTATCTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACCCCAGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp TGGTGTGGCTGCCGTAGAGGATGGGGCTACACAGCATaGCCATGTGCTGGGGTGCAAAGCATGAGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: WCGCRRGWGYTA*PCAGVQSMSAG
Trigger: ACCTGCGCTCATGCTTTGCACCCCAGCACATGGCCATGCTGTGTAGCCCCATCCTCTACGGCAGCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp CTGGAAGTGGCACAGGAGGTGGTGACACAGCACAAATaGCCAGGGGAGGGCAACTCAGGACCTCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: LEVAQEVVTQHK*PGEGNSGPHCP
Trigger: TGGGCAGTGAGGTCCTGAGTTGCCCTCCCCTGGCCATTTGTGCTGTGTCACCACCTCCTGTGCCACTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS CCA 72 bp TCAGGGCGGGGCCTTGGGAGTGTGTGCGGGCAGCACTaGTCTCCAAAGGCACTACCTGCAGATTGTCCACAA +
Preference number: 6 (lower is better)
Translates to: SGRGLGSVCGQH*SPKALPADCPQ
Trigger: TTGTGGACAATCTGCAGGTAGTGCCTTTGGAGACCAGTGCTGCCCGCACACACTCCCAAGGCCCCGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CAA 72 bp TTGCGACAGTTGTGGGTGCCACGGTTGGGCATGGGGTaGAAGTCGGCCTTGATGACGTTGAGGTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LRQLWVPRLGMG*KSALMTLRCWG
Trigger: GCCCCAGCACCTCAACGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp GAAGCAGGATGGGTTCTGAGCCCAACTGACTGCTGCTaGGTCCTCGCTCCACTCCTCCCAGCCATGTGCCCT +
Preference number: 6 (lower is better)
Translates to: EAGWVLSPTDCC*VLAPLLPAMCP
Trigger: AGGGCACATGGCTGGGAGGAGTGGAGCGAGGACCAAGCAGCAGTCAGTTGGGCTCAGAACCCATCCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS CAA 90 bp TGGGGTGCAAAGCATGAGCGCAGGTCCGCGTGGAACTCGTGCAGGTaGGCGGCGTCCGAGATAATGAAGAGCGTGTTCTCACTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: WGAKHERRSAWNSCR*AASEIMKSVFSLCR
Trigger: ACGGCACAGTGAGAACACGCTCTTCATTATCTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTTTGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp CCAAAGTGGTCCAGGGTGACACTGCCCATGAGGTCATaGCCTTGCACGTCATCGAAGACGAGGGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PKWSRVTLPMRS*PCTSSKTRVRA
Trigger: GGCCCTCACCCTCGTCTTCGATGACGTGCAAGGTCATGACCTCATGGGCAGTGTCACCCTGGACCACTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp CACACAGGGCCTCCCACTGGCGAGCCAACAGCGAGATaGGCTTCTCTCTGCTCTCAGCACTGGGGACAAACA +
Preference number: 6 (lower is better)
Translates to: HTGPPTGEPTAR*ASLCSQHWGQT
Trigger: TGTTTGTCCCCAGTGCTGAGAGCAGAGAGAAGCTCATCTCGCTGTTGGCTCGCCAGTGGGAGGCCCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp GCCCATGACGTCTGTCCAGGCAGCCTGTCTGCAGCCTaGGCTAGACAGGGGTACCTGTGGTCTTGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: AHDVCPGSLSAA*ARQGYLWSCSQ
Trigger: TTGGGAACAAGACCACAGGTACCCCTGTCTAGCTCAGGCTGCAGACAGGCTGCCTGGACAGACGTCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS TCA 72 bp TCAGTGGACGAGAGGCTGCTGGCCAGGGCCTCCTCCTaGACGAACATGATTCCAGGTCAAGGGGTGGGAATG +
Preference number: 6 (lower is better)
Translates to: SVDERLLARASS*TNMIPGQGVGM
Trigger: CATTCCCACCCCTTGACCTGGAATCATGTTCGTTCAGGAGGAGGCCCTGGCCAGCAGCCTCTCGTCCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485765.5
CDS GCA 72 bp GCAGAGACACGTGCTCCAGACACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCTGTTCGATCCTGTTGT +
Preference number: 6 (lower is better)
Translates to: AETRAPDTGGCL*SGPPPSVRSCC
Trigger: ACAACAGGATCGAACAGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS GCA 72 bp AAAAGACAAAGCGCAGGGAGGAGAGGATGTGCTGGCTaGTGCCCCGAGACTCCTGGTGCGGGATCTCGAAGA +
Preference number: 6 (lower is better)
Translates to: KRQSAGRRGCAG*CPETPGAGSRR
Trigger: TCTTCGAGATCCCGCACCAGGAGTCTCGGGGCAGCAGCCAGCACATCCTCTCCTCCCTGCGCTTTGTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp TCCGGCATGAGGAAGCCAAACTCGGTGAGGTCGCCATaGGGGAAGCAAAAGACAAAGCGCAGGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SGMRKPNSVRSP*GKQKTKRREER
Trigger: CCTCTCCTCCCTGCGCTTTGTCTTTTGCTTCCCGCATGGCGACCTCACCGAGTTTGGCTTCCTCATGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp GCAGAGACACGTGCTCCAGACACGGGAGGCTGCCTATaGTCCGGACCTCCTCCATCTGCAAGGTATGAGTTC +
Preference number: 6 (lower is better)
Translates to: AETRAPDTGGCL*SGPPPSARYEF
Trigger: GAACTCATACCTTGCAGATGGAGGAGGTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474188.1
CDS GCA 72 bp CCCAGGAGCTGTTCTCCTATGCTGCAACCTCCGAAATaGAAACACCCAGGTCAGGCGCAGGCCTATGGTGCC +
Preference number: 6 (lower is better)
Translates to: PRSCSPMLQPPK*KHPGQAQAYGA
Trigger: GGCACCATAGGCCTGCGCCTGACCTGGGTGTTTGCATTTCGGAGGTTGCAGCATAGGAGAACAGCTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS CCA 72 bp CCCGCAGGGATGGACTCCAAGGAATCAGAACATCCCTaGGCAATGGGCTGGTGCTCGGGAGTCAGACTGTCA +
Preference number: 6 (lower is better)
Translates to: PAGMDSKESEHP*AMGWCSGVRLS
Trigger: TGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGAGTCCATCCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS CCA 72 bp CTCAGCTCCTCGTTTTCAACCTCAGCAATGCTGCTGTaGAAGAGCTCGATGATGGCGCTGCCCCGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSFSTSAMLL*KSSMMALPRRL
Trigger: CAGCCTGCGGGGCAGCGCCATCATCGAGCTCTTCCACAGCAGCATTGCTGAGGTTGAAAACGAGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS CCA 72 bp CACGTACAGCAGGATGCTGAGGGCTGGGGCCTTCTCTaGCTCAGCCATCTTTTGGGCCACAGTGAACGTCAG +
Preference number: 6 (lower is better)
Translates to: HVQQDAEGWGLL*LSHLLGHSERQ
Trigger: CTGACGTTCACTGTGGCCCAAAAGATGGCTGAGCCAGAGAAGGCCCCAGCCCTCAGCATCCTGCTGTACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp TATGGTGCCAGCGTGGTGCAGAGCCTGGAAGCAGGATaGGTTCTGAGCCCAACTGACTGCTGCTTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: YGASVVQSLEAG*VLSPTDCCLVL
Trigger: GAGGACCAAGCAGCAGTCAGTTGGGCTCAGAACCCATCCTGCTTCCAGGCTCTGCACCACGCTGGCACCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488157.5
CDS CAA 72 bp ACACGGCTGAGCTTGAAGCTGTTGCGGTTGCGACAGTaGTGGGTGCCACGGTTGGGCATGGGGTTGAAGTCG +
Preference number: 6 (lower is better)
Translates to: TRLSLKLLRLRQ*WVPRLGMGLKS
Trigger: CGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAGCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp CTGAGCTTGAAGCTGTTGCGGTTGCGACAGTTGTGGGTGCCACGGTaGGGCATGGGGTTGAAGTCGGCCTTGATGACGTTGAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LSLKLLRLRQLWVPR*GMGLKSALMTLRCW
Trigger: CCAGCACCTCAACGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTTCAAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 90 bp GCGGCGTCCGAGATAATGAAGAGCGTGTTCTCACTGTGCCGTACCTaGAGCACCAGACACAGCTCCGGCATGAGGAAGCCAAACTCGGTG +
Preference number: 6 (lower is better)
Translates to: AASEIMKSVFSLCRT*STRHSSGMRKPNSV
Trigger: CACCGAGTTTGGCTTCCTCATGCCGGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTGAGAACACGCTCTTCATTATCTCGGACGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp TCAGGTCAAGCGTGGTCAATGCCTGCCAAGTGGGGATaGCGGCAGTCACAGGGCCTTCTAGGGTTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: SGQAWSMPAKWG*RQSQGLLGLCL
Trigger: AAGGCACAACCCTAGAAGGCCCTGTGACTGCCGTCATCCCCACTTGGCAGGCATTGACCACGCTTGACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS TCA 72 bp CGAACTGAGCCAGCACCTTGGTCCGGTAGTCGGGGATaGTGCTCAGAGGGTTGTTCAGCAGAGACACGTGCT +
Preference number: 6 (lower is better)
Translates to: RTEPAPWSGSRG*CSEGCSAETRA
Trigger: AGCACGTGTCTCTGCTGAACAACCCTCTGAGCATCATCCCCGACTACCGGACCAAGGTGCTGGCTCAGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS TCA 72 bp TGCCCTGCACATGGATCAGGAAGCACCACAGCACCTTaGGGATGCGGATGTGCTCCAGCAGGAAGTCCTCGT +
Preference number: 6 (lower is better)
Translates to: CPAHGSGSTTAP*GCGCAPAGSPR
Trigger: ACGAGGACTTCCTGCTGGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCTTCCTGATCCATGTGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000488243.1
ENST00000489895.5
CDS TCA 72 bp AGTGGAACTTCTCGTGGGGCAGCACGAAGATGGCAGTaGCAAAGCGGTACCCCACGAGCAGCTCTAGCACGT +
Preference number: 6 (lower is better)
Translates to: SGTSRGAARRWQ*QSGTPRAALAR
Trigger: ACGTGCTAGAGCTGCTCGTGGGGTACCGCTTTGTCACTGCCATCTTCGTGCTGCCCCACGAGAAGTTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp GCCCTGGGGTCTGGTAGAACACCACCGAGGACCACATaGGGTGCCTCAGCTCCTCGTTTTCAACCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: ALGSGRTPPRTT*GASAPRFQPQQ
Trigger: TTGCTGAGGTTGAAAACGAGGAGCTGAGGCACCTCATGTGGTCCTCGGTGGTGTTCTACCAGACCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345716.9
ENST00000479054.5
CDS TCA 72 bp GCCCTGGGGTCTGGTAGAACACCACCGAGGACCACATaGGGTGCCTCAGCTCCTCGTTTTCAACCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: ALGSGRTPPRTT*GASAPRFQPED
Trigger: GTCTTCAGGTTGAAAACGAGGAGCTGAGGCACCTCATGTGGTCCTCGGTGGTGTTCTACCAGACCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS GCA 72 bp TTAAGGTACTTAAGGCGACAGGTGAAGTCCAGGATGTaGCCGAGGTCGGTCTTGGCATCCCCACTGGCGCAC +
Preference number: 6 (lower is better)
Translates to: LRYLRRQVKSRM*PRSVLASPLAH
Trigger: GTGCGCCAGTGGGGATGCCAAGACCGACCTCGGGCACATCCTGGACTTCACCTGTCGCCTTAAGTACCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488157.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS GCA 72 bp TCCAAGGAATCAGAACATCCCTGGGCAATGGGCTGGTaGTCGGGAGTCAGACTGTCAGTGGACGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SKESEHPWAMGW*SGVRLSVDERL
Trigger: CAGCCTCTCGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS GCA 72 bp GCGGCGTCCGAGATAATGAAGAGCGTGTTCTCACTGTaGCGTACCTTGAGCACCAGACACAGCTCCGGCATG +
Preference number: 6 (lower is better)
Translates to: AASEIMKSVFSL*RTLSTRHSSGM
Trigger: CATGCCGGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTGAGAACACGCTCTTCATTATCTCGGACGCCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp GGATGGACTCCAAGGAATCAGAACATCCCTGGGCAATaGGCTGGTGCTCGGGAGTCAGACTGTCAGTGGACG +
Preference number: 6 (lower is better)
Translates to: GWTPRNQNIPGQ*AGARESDCQWT
Trigger: CGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCCCAGGGATGTTCTGATTCCTTGGAGTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000460759.1
ENST00000479054.5
ENST00000485765.5
ENST00000489895.5
CDS CCA 72 bp GTCTCTCTGCGGCGGCTCTTTGGCAAACTCGGGCAGTaGGTAGTGGACACAGTCCTCATCCAGGAGGAAGAT +
Preference number: 6 (lower is better)
Translates to: VSLRRLFGKLGQ*VVDTVLIQEED
Trigger: ATCTTCCTCCTGGATGAGGACTGTGTCCACTACCCACTGCCCGAGTTTGCCAAAGAGCCGCCGCAGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp AAGCATGAGCGCAGGTCCGCGTGGAACTCGTGCAGGTaGGCGGCGTCCGAGATAATGAAGAGCGTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: KHERRSAWNSCR*AASEIMKSVFS
Trigger: TGAGAACACGCTCTTCATTATCTCGGACGCCGCCAACCTGCACGAGTTCCACGCGGACCTGCGCTCATGCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp AAGCTGTTGCGGTTGCGACAGTTGTGGGTGCCACGGTaGGGCATGGGGTTGAAGTCGGCCTTGATGACGTTG +
Preference number: 6 (lower is better)
Translates to: KLLRLRQLWVPR*GMGLKSALMTL
Trigger: CAACGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGTGGCACCCACAACTGTCGCAACCGCAACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS GCA 72 bp ATTTTAGGAAGGGAAGTCCCTCTTCTCTGCCGCACATaGCACAGCACAGTGGCACCCCTGCAGACAGTTGGG +
Preference number: 6 (lower is better)
Translates to: ILGREVPLLCRT*HSTVAPLQTVG
Trigger: CCCAACTGTCTGCAGGGGTGCCACTGTGCTGTGGCATGTGCGGCAGAGAAGAGGGACTTCCCTTCCTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS TCA 72 bp CCATCTGTTCGATCCTGTTGTCCCGGAGATCCAGGTTaGCCAGTGAGTAGAGCTTGTGCAGGCCACTCAGAC +
Preference number: 6 (lower is better)
Translates to: PSVRSCCPGDPG*PVSRACAGHSD
Trigger: GTCTGAGTGGCCTGCACAAGCTCTACTCACTGGTCAACCTGGATCTCCGGGACAACAGGATCGAACAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CCA 72 bp CATAGAAGTGAAAATGCAAGAAGTGGGCCAGTACTCTaGGGGTCACGCCAGGGAAGGCAGCCAGGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: HRSENARSGPVL*GSRQGRQPGAS
Trigger: AGAAGCTCCTGGCTGCCTTCCCTGGCGTGACCCCCAGAGTACTGGCCCACTTCTTGCATTTTCACTTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CCA 72 bp AGTTTCACAGACTCGTCGATCTCGGAGACGCTGTTGTaGCTCAGGTCAAGCGTGGTCAATGCCTGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: SFTDSSISETLL*LRSSVVNACQV
Trigger: CACTTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACAGCGTCTCCGAGATCGACGAGTCTGTGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS CCA 72 bp CTTTCAGCACTTCCACAGTGTCCAGCTCCTTCTCTGTaGTCACTGTGTCATCCAGACAGACCTCTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LSALPQCPAPSL*SLCHPDRPLRP
Trigger: GGGCCTCAGAGGTCTGTCTGGATGACACAGTGACCACAGAGAAGGAGCTGGACACTGTGGAAGTGCTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CAA 90 bp ATCTTTGGGATCAGTTTCACAGACTCGTCGATCTCGGAGACGCTGTaGTGGCTCAGGTCAAGCGTGGTCAATGCCTGCCAAGTGGGGATG +
Preference number: 6 (lower is better)
Translates to: IFGISFTDSSISETL*WLRSSVVNACQVGM
Trigger: CATCCCCACTTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACAGCGTCTCCGAGATCGACGAGTCTGTGAAACTGATCCCAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS CCA 72 bp CCACAGCTTCCACAAGGAGACATGGGAAGCCCCTCTTaGCTCACCAATGAATCCGTATGCTTCAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PQLPQGDMGSPS*LTNESVCFKAE
Trigger: CTCTGCCTTGAAGCATACGGATTCATTGGTGAGCCAAGAGGGGCTTCCCATGTCTCCTTGTGGAAGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS CAA 72 bp ATCAGTTTCACAGACTCGTCGATCTCGGAGACGCTGTaGTGGCTCAGGTCAAGCGTGGTCAATGCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: ISFTDSSISETL*WLRSSVVNACQ
Trigger: TTGGCAGGCATTGACCACGCTTGACCTGAGCCACAACAGCGTCTCCGAGATCGACGAGTCTGTGAAACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS CAA 72 bp GAGATAATGAAGAGCGTGTTCTCACTGTGCCGTACCTaGAGCACCAGACACAGCTCCGGCATGAGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: EIMKSVFSLCRT*STRHSSGMRKP
Trigger: TGGCTTCCTCATGCCGGAGCTGTGTCTGGTGCTCAAGGTACGGCACAGTGAGAACACGCTCTTCATTATCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345716.9
ENST00000479054.5
ENST00000489895.5
CDS CAA 72 bp CCCGTCAGCCGGAAATGCTGGTCGAAAAGCCCCACATaGACTGACTGCAGGTCACTAAGCTTTAGCACGAAG +
Preference number: 6 (lower is better)
Translates to: PVSRKCWSKSPT*TDCRSLSFSTK
Trigger: CTTCGTGCTAAAGCTTAGTGACCTGCAGTCAGTCAATGTGGGGCTTTTCGACCAGCATTTCCGGCTGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS TCA 72 bp ACAAGGAGACATGGGAAGCCCCTCTTGGCTCACCAATaGATCCGTATGCTTCAAGGCAGAGAGGAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: TRRHGKPLLAHQ*IRMLQGREEER
Trigger: CCTCTCTTCCTCTCTGCCTTGAAGCATACGGATTCATTGGTGAGCCAAGAGGGGCTTCCCATGTCTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467594.1
CDS GCA 72 bp CGGAAATGCTGGTCGAAAAGCCCCACATTGACTGACTaGAGGTCACTAAGCTTTAGCACGAAGCACTGGGAG +
Preference number: 6 (lower is better)
Translates to: RKCWSKSPTLTD*RSLSFSTKHWE
Trigger: CTCCCAGTGCTTCGTGCTAAAGCTTAGTGACCTGCAGTCAGTCAATGTGGGGCTTTTCGACCAGCATTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345716.9
ENST00000467594.1
ENST00000479054.5
ENST00000489895.5
CDS CCA 72 bp TCAGGAACAAGGACTTCCTGCATAAAAACATCTGTGTaGAGCACCACACTCGGGCCCTCACGCAACACTCAC +
Preference number: 6 (lower is better)
Translates to: SGTRTSCIKTSV*STTLGPSRNTH
Trigger: GTGAGTGTTGCGTGAGGGCCCGAGTGTGGTGCTCCACACAGATGTTTTTATGCAGGAAGTCCTTGTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481211.1
CDS CCA 72 bp GTCTCCAAAGATAGGGGCCTGACACTAATGGCAGGATaGGCCTTCCAACCCAAACTACCCAGTTCTGCAAGT +
Preference number: 6 (lower is better)
Translates to: VSKDRGLTLMAG*AFQPKLPSSAS
Trigger: ACTTGCAGAACTGGGTAGTTTGGGTTGGAAGGCCCATCCTGCCATTAGTGTCAGGCCCCTATCTTTGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CAA 72 bp ACACCAAGGCACAGAAATCCCAAAACTGTGAGGTCCTaGGGCTCACCTGTTCGATCCTGTTGTCCCGGAGAT +
Preference number: 6 (lower is better)
Translates to: TPRHRNPKTVRS*GSPVRSCCPGD
Trigger: ATCTCCGGGACAACAGGATCGAACAGGTGAGCCCAAGGACCTCACAGTTTTGGGATTTCTGTGCCTTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474188.1
CDS CAA 72 bp CGGGCCCTCACGCAACACTCACTGGGAACACAGTCGTaGCAGAATTTAAGGAAGGGCTGGAGCATATTTAGC +
Preference number: 6 (lower is better)
Translates to: RALTQHSLGTQS*QNLRKGWSIFS
Trigger: GCTAAATATGCTCCAGCCCTTCCTTAAATTCTGCAACGACTGTGTTCCCAGTGAGTGTTGCGTGAGGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481211.1
CDS CAA 90 bp CACCACACTCGGGCCCTCACGCAACACTCACTGGGAACACAGTCGTaGCAGAATTTAAGGAAGGGCTGGAGCATATTTAGCATGTGGAAG +
Preference number: 6 (lower is better)
Translates to: HHTRALTQHSLGTQS*QNLRKGWSIFSMWK
Trigger: CTTCCACATGCTAAATATGCTCCAGCCCTTCCTTAAATTCTGCAACGACTGTGTTCCCAGTGAGTGTTGCGTGAGGGCCCGAGTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481211.1
CDS TCA 72 bp GGGTTGCTCAGTTTGGACTTGACCTCCTTGGCTTTCTaGATTGCTTTCAGCACTTCCACAGTGTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GLLSLDLTSLAF*IAFSTSTVSSS
Trigger: GGAGCTGGACACTGTGGAAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS TCA 72 bp CATCACAGTGACTTATCTCCACCTGATGCAGGGACTTaGATATTGATAGGTCGAACGGCAGGAGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: HHSDLSPPDAGT*ILIGRTAGAAP
Trigger: AGGAGCAGCTCCTGCCGTTCGACCTATCAATATTCAAGTCCCTGCATCAGGTGGAGATAAGTCACTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
ENST00000490425.1
CDS TCA 72 bp CATGATACACACCAAGGCACAGAAATCCCAAAACTGTaGGGTCCTTGGGCTCACCTGTTCGATCCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: HDTHQGTEIPKL*GPWAHLFDPVV
Trigger: GACAACAGGATCGAACAGGTGAGCCCAAGGACCTCACAGTTTTGGGATTTCTGTGCCTTGGTGTGTATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474188.1
CDS TCA 72 bp AGGTGCTGCAGATTGTCCACAACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCAATCTTTGGGATCAGT +
Preference number: 6 (lower is better)
Translates to: RCCRLSTTSNPL*LRSRNSIFGIS
Trigger: ACTGATCCCAAAGATTGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGTTGTGGACAATCTGCAGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
CDS TCA 72 bp CACCACCCTTCTTCTCTGGGTTGCTCAGTTTGGACTTaGCCTCCTTGGCTTTCTGAATTGCTTTCAGCACTT +
Preference number: 6 (lower is better)
Translates to: HHPSSLGCSVWT*PPWLSELLSAL
Trigger: AAGTGCTGAAAGCAATTCAGAAAGCCAAGGAGGTCAAGTCCAAACTGAGCAACCCAGAGAAGAAGGGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000474188.1
ENST00000479054.5
ENST00000488380.5
ENST00000489895.5
CDS CAA 72 bp GCAATCCATTGTGACTCAGGTCCAGGAACTCAATCTTaGGGATCAGTTTCACAGACTCGTCGATCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: AIHCDSGPGTQS*GSVSQTRRSRR
Trigger: TCTCCGAGATCGACGAGTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGGACCTGAGTCACAATGGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345716.9
ENST00000420808.2
ENST00000464280.5
ENST00000479054.5
ENST00000481211.1
ENST00000488380.5
ENST00000489895.5
CDS TCA 72 bp ACTACCTGCAGATTGTCCACAACCAGCAATCCATTGTaGCTCAGGTCCAGGAACTCAATCTTTGGGATCAGT +
Preference number: 6 (lower is better)
Translates to: TTCRLSTTSNPL*LRSRNSIFGIS
Trigger: ACTGATCCCAAAGATTGAGTTCCTGGACCTGAGTCACAATGGATTGCTGGTTGTGGACAATCTGCAGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CAA 90 bp CATGGCTGTCCACCTTCAGGACGGAGGTGCATCATCATGCCTGGTTaGTATTTACTCATGCTTCCTAATTCTTTGGAACTAGAGCAACAA +
Preference number: 6 (lower is better)
Translates to: HGCPPSGRRCIIMPG*YLLMLPNSLELEQQ
Trigger: TTGTTGCTCTAGTTCCAAAGAATTAGGAAGCATGAGTAAATACAAACCAGGCATGATGATGCACCTCCGTCCTGAAGGTGGACAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CAA 72 bp CCACCTTCAGGACGGAGGTGCATCATCATGCCTGGTTaGTATTTACTCATGCTTCCTAATTCTTTGGAACTA +
Preference number: 6 (lower is better)
Translates to: PPSGRRCIIMPG*YLLMLPNSLEL
Trigger: TAGTTCCAAAGAATTAGGAAGCATGAGTAAATACAAACCAGGCATGATGATGCACCTCCGTCCTGAAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489895.5
CDS CAA 72 bp ATGCCTGGTTTGTATTTACTCATGCTTCCTAATTCTTaGGAACTAGAGCAACAATCACTCAGTGCATTGCTG +
Preference number: 6 (lower is better)
Translates to: MPGLYLLMLPNS*ELEQQSLSALL
Trigger: CAGCAATGCACTGAGTGATTGTTGCTCTAGTTCCAAAGAATTAGGAAGCATGAGTAAATACAAACCAGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489895.5