Pregenerated sensors for NIPSNAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000184117Ensembl transcript IDs: ENST00000216121.12, ENST00000415100.5, ENST00000437094.5, ENST00000494966.1, ENST00000496944.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTCTGTATTCCAGATTCCAAATTCTACAATTGAAACCCAAGTTCTaGATTCTAAGTTCTACCTTCCGAGTTCCTGTTACGTGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: ILYSRFQILQLKPKF*ILSSTFRVPVTCLS Trigger: AGACAGACACGTAACAGGAACTCGGAAGGTAGAACTTAGAATTCAGAACTTGGGTTTCAATTGTAGAATTTGGAATCTGGAATACAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR GCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAACAGCAGGACCAGGAGTaGCACTGTCTGTCGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PPHTRWPCRMRVGLIECQQQDQE*HCLSGL Trigger: CAACCCCGACAGACAGTGGCACTCCTGGTCCTGCTG...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAACAGTTCCCCCTTGTCTaGACTGAGCACTGCCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: PPHTRWPCRMRVGLIECQQFPLV*TEHCPS Trigger: TGAGGGGCAGTGCTCAGTTCAGACAAGGGGGAACTG...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR GCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAAACTGTCTGTCGGGGTTaGCTGAGGGAGAAGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PPHTRWPCRMRVGLIECQTVCRG*LREKGK Trigger: CTTCCCCTTCTCCCTCAGGCAACCCCGACAGACAGT...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGCACACCAGGTGGCCCTaGAGAATGAGGGTTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FLDGRQNQATQGFMMRYGHTRWP*RMRVGL Trigger: CAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTG...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR CAA 90 bp | TCAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTaGTATATTTGCCTGCAGGAAGGAGGGAGGGCAGGAGAGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: SIRGDRIQGEGTGSS*YICLQEGGRAGETL Trigger: CAGAGTCTCTCCTGCCCTCCCTCCTTCCTGCAGGCAAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR CCA 90 bp | TACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTGCCTGCAGGAAGGAGGGATCCAAGGGTGATAACTaGGGACTGGTGGCCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: YRVREQGLACIFACRKEGSKGDN*GLVALR Trigger: TCTCAAGGCCACCAGTCCCCAGTTATCACCCTTGGA...TCCCTCCTTCCTGCAGGCAAATATACAAGCTAGACCCTGTTCCCTCACCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR CCA 90 bp | TATGCAGGGGGAAACAGCCAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCTTTCCCCAGCCCCTCTaGGCAGAATGTCTGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: YAGGNSQATLHLSSIRNLFPQPL*AECLNL Trigger: GAGGTTCAGACATTCTGCCCAGAGGGGCTGGGGAAA...GAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTGGCTGTTTCCCCCTGCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGCTGCAGAATGAGGGTTaGGCTGATAGAATGTCAATT | + |
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Preference number: 2 (lower is better) Translates to: FLDGRQNQATQGFMMRYGLQNEG*ADRMSI Trigger: AATTGACATTCTATCAGCCCAACCCTCATTCTGCAG...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR TCA 90 bp | TATGCAGGGGGAAACAGCCAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCCTGGTGGCCTTGAGATaGGGAATTTTAGAAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: YAGGNSQATLHLSSIRNLLVALR*GILEDK Trigger: TTTATCTTCTAAAATTCCTCATCTCAAGGCCACCAG...GAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTGGCTGTTTCCCCCTGCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR CCA 90 bp | CAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTGAACCTCTCTTCAAGTaGTCTTTTGTCATCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: QLGETGYRVREQGLACIFEPLFK*SFVISV Trigger: AACAGAGATGACAAAAGACCACTTGAAGAGAGGTTC...AAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR-3UTR CAA 90 bp | TACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTGCCTGCAGGAAGGAGGGACACTGTCTGTCGGGGTaGCCTGAGGGAGAAGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: YRVREQGLACIFACRKEGHCLSG*PEGEGE Trigger: TTCCCCTTCTCCCTCAGGCAACCCCGACAGACAGTG...TCCCTCCTTCCTGCAGGCAAATATACAAGCTAGACCCTGTTCCCTCACCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| 3UTR CCA 72 bp | AATTGTTTCCATCAGCAATTCCAGCACAAGTTTTCCTaGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: NCFHQQFQHKFS*MVGRIKLPKGS Trigger: TGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAAACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAAGAGCTCTCCTATCTGTaGGAAGAAGCCGCCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: PPHTRWPCRMRVGLIECQELSYL*EEAAHC Trigger: GCAGTGGGCGGCTTCTTCTCACAGATAGGAGAGCTC...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGGCGCCGTCACAGAGATaGTGCACAGCCGCGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FLDGRQNQATQGFMMRYGAPSQR*CTAAEP Trigger: TGGCTCCGCGGCTGTGCAGCATCTCTGTGACGGCGC...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAAAGACTGTCCAGCAAGTaGGTGGCCCAGTGGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: PPHTRWPCRMRVGLIECQRLSSK*VAQWKP Trigger: TGGTTTCCACTGGGCCACCCACTTGCTGGACAGTCT...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGGCAGCACAGCCTCCGTaGGGCTGTTGTAGGCATCCA | + |
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Preference number: 4 (lower is better) Translates to: FLDGRQNQATQGFMMRYGAAQPP*GCCRHP Trigger: TGGATGCCTACAACAGCCTCACGGAGGCTGTGCTGC...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | GGTTGGGCTGATAGAATGTCAATTAGGGGAGACAGGATACAGGGTGAGGGAACATCTCCTGCCGGTACTTaGTGGCCCGAGCCCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GWADRMSIRGDRIQGEGTSPAGT*WPEPSC Trigger: ACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGA...TGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTGACATTCTATCAGCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | TTCCATCAGCAATTCCAGCACAAGTTTTCCTGGATGGTAGGCAGAATCAAGCTAGACCCCCAGAGTCACTaGCCCCTCCCGCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FHQQFQHKFSWMVGRIKLDPQSH*PLPPPP Trigger: TGGAGGTGGCGGGAGGGGTCAGTGACTCTGGGGGTC...TAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTGAAACGCGCCGCAGCTaGAGACGCAACGTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QLGETGYRVREQGLACIFETRRS*RRNVPS Trigger: GCTGGGGACGTTGCGTCTGCAGCTGCGGCGCGTTTC...AAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAAGGGAGCGGAACCAGCTaGCTTCATTGTCCTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: PPHTRWPCRMRVGLIECQGSGTS*LHCPWN Trigger: ATTCCAAGGACAATGAAGGCAGCTGGTTCCGCTCCC...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCAGGAAGAAGCCGCCCACTaGCTCCTGGTTCTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LSFIQGNQKLLLAGGGRQEEAAH*LLVLLP Trigger: CGGCAGGAGAACCAGGAGGCAGTGGGCGGCTTCTTC...CTGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | TATGCAGGGGGAAACAGCCAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCCAGCAGGACCAGGAGTaGCACTGTCTGTCGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: YAGGNSQATLHLSSIRNLQQDQE*HCLSGL Trigger: CAACCCCGACAGACAGTGGCACTCCTGGTCCTGCTG...GAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTGGCTGTTTCCCCCTGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGACTGTCTGTCGGGGTTaGCTGAGGGAGAAGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FLDGRQNQATQGFMMRYGTVCRG*LREKGK Trigger: CTTCCCCTTCTCCCTCAGGCAACCCCGACAGACAGT...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | CTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCAGCTGGACAGCAGCATCTaGCTCCGCTCCCTTCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LSFIQGNQKLLLAGGGRQLDSSI*LRSLRN Trigger: GTTCCGAAGGGAGCGGAGCCAGATGCTGCTGTCCAG...CTGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | GGTTGGGCTGATAGAATGTCAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGCAGCTGGTTTCTCCTaGACAGCAGCATCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GWADRMSIRGDRIQGEGTAAGFS*TAASGS Trigger: GGAGCCAGATGCTGCTGTCCAGGAGAAACCAGCTGC...TGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTGACATTCTATCAGCCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | CCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGCTGATAGAATGTCAATCAGCTCATAGATGTTaGGACCCATTCTGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PPHTRWPCRMRVGLIECQSAHRC*DPFWAV Trigger: CACAGCCCAGAATGGGTCCCAACATCTATGAGCTGA...TTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | CAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTCCGCCCACTGCCTCCTaGTTCTCCTGCCGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: QLGETGYRVREQGLACIFPPTAS*FSCRYL Trigger: CAAGTACCGGCAGGAGAACCAGGAGGCAGTGGGCGG...AAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | CTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCAGCAGTTCCCCCTTGTCTaGACTGAGCACTGCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LSFIQGNQKLLLAGGGRQQFPLV*TEHCPS Trigger: TGAGGGGCAGTGCTCAGTTCAGACAAGGGGGAACTG...CTGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTCCGTCACAGAGATGCTaGACAGCCGCGGAGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: QLGETGYRVREQGLACIFPSQRC*TAAEPC Trigger: ACATGGCTCCGCGGCTGTGCAGCATCTCTGTGACGG...AAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCATCGCCACAGGTGCACTaGCTGGTCCTGCTCCCCATA | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREASPQVH*LVLLPI Trigger: TATGGGGAGCAGGACCAGGCAGTGCACCTGTGGCGA...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTGAGAATCGCCACAGGTaGACTGCCTGGTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLGETGYRVREQGLACIFENRHR*TAWSCS Trigger: GGAGCAGGACCAGGCAGTGCACCTGTGGCGATTCTC...AAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCAGCCTCCTGGTTCTCCTaGCGGTACTTGATGGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREAASWFS*RYLMAR Trigger: TCGGGCCATCAAGTACCGGCAGGAGAACCAGGAGGC...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCACACACCAGGTGGCCCTaGAGAATGAGGGTTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREAHTRWP*RMRVGL Trigger: CAGCCCAACCCTCATTCTGCAGGGCCACCTGGTGTG...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | TTCCATCAGCAATTCCAGCACAAGTTTTCCTGGATGGTAGGCAGAATCAAGCTAGCCGCGGAGCCATGTTaGAGCCGCAAAGGTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FHQQFQHKFSWMVGRIKLAAEPC*SRKGCR Trigger: CCTGCAACCTTTGCGGCTCCAACATGGCTCCGCGGC...TAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGTTTCCCCAGCCCCTCTaGGCAGAATGTCTGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: FLDGRQNQATQGFMMRYGFPQPL*AECLNL Trigger: GAGGTTCAGACATTCTGCCCAGAGGGGCTGGGGAAA...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCACCTCCACACACCAGGTaGCCCTGCAGAATGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREAPPHTR*PCRMRV Trigger: AACCCTCATTCTGCAGGGCCACCTGGTGTGTGGAGG...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | GGTTGGGCTGATAGAATGTCAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGTTCATGATGAGGTATaGGGGTCACTGAGGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: GWADRMSIRGDRIQGEGTVHDEV*GSLRRP Trigger: GGGTCTCCTCAGTGACCCCCATACCTCATCATGAAC...TGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTGACATTCTATCAGCCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | TATGCAGGGGGAAACAGCCAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCTCATGGTTCCTGGCTTaGGCTTGTATGTCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: YAGGNSQATLHLSSIRNLSWFLA*ACMSSA Trigger: AGCTGAGGACATACAAGCTCAAGCCAGGAACCATGA...GAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTGGCTGTTTCCCCCTGCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTACCACGTGTTCCAGTTaGCCACGAGTGAGCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: QLGETGYRVREQGLACIFTTCSS*PRVSMG Trigger: ACCCATGCTCACTCGTGGGCAACTGGAACACGTGGT...AAATATACAAGCTAGACCCTGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | TTCCTGGATGGTAGGCAGAATCAAGCTACCCAAGGGTTCATGATGAGGTATGGGTGTAGGCAGCATCACTaGAGAGGCGAGATCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: FLDGRQNQATQGFMMRYGCRQHH*RGEIFK Trigger: CTTGAAGATCTCGCCTCTGCAGTGATGCTGCCTACA...CCCATACCTCATCATGAACCCTTGGGTAGCTTGATTCTGCCTACCATCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCATGCTGGTTTCCTTCTTaGACAGCAGGGTGGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREACWFPS*TAGWSG Trigger: CCCACTCCACCCTGCTGTCCAAGAAGGAAACCAGCA...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | TTCCATCAGCAATTCCAGCACAAGTTTTCCTGGATGGTAGGCAGAATCAAGCTATGTCCAGCAAGTGGGTaGCCCAGTGGAAACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FHQQFQHKFSWMVGRIKLCPASG*PSGNQG Trigger: TCCCTGGTTTCCACTGGGCCACCCACTTGCTGGACA...TAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | GGTTGGGCTGATAGAATGTCAATTAGGGGAGACAGGATACAGGGTGAGGGAACACTCGATCATGGTTCCTaGCTTGAGCTTGTATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GWADRMSIRGDRIQGEGTLDHGS*LELVCP Trigger: AGGACATACAAGCTCAAGCCAGGAACCATGATCGAG...TGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTGACATTCTATCAGCCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCATCCAAGGGTGATAACTaGGGACTGGTGGCCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREASKGDN*GLVALR Trigger: TCTCAAGGCCACCAGTCCCCAGTTATCACCCTTGGA...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCATGCCTTCATTGTCCTTaGAATAGAAACGCGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREACLHCP*NRNAPQ Trigger: CTGCGGCGCGTTTCTATTCCAAGGACAATGAAGGCA...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR TCA 90 bp | TACAGGGTGAGGGAACAGGGTCTAGCTTGTATATTTGCCTGCAGGAAGGAGGGACTGGTGGCCTTGAGATaGGGAATTTTAGAAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: YRVREQGLACIFACRKEGLVALR*GILEDK Trigger: TTTATCTTCTAAAATTCCTCATCTCAAGGCCACCAG...TCCCTCCTTCCTGCAGGCAAATATACAAGCTAGACCCTGTTCCCTCACCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | CAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCTCTTCAAGTGGTCTTTTGGGGCAGGAGAGACTCTaGATAGAAGGACTGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: QATLHLSSIRNLSSSGLLGQERL*IEGLEL Trigger: TAGTTCCAGTCCTTCTATGCAGAGTCTCTCCTGCCC...CAAAAGACCACTTGAAGAGAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR GCA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCATCTAGCTTGTATATTTaGCTGCAGGAAGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TIFHSGKSETTSSRGREASSLYI*LQEGGR Trigger: CCTCCCTCCTTCCTGCAGGCAAATATACAAGCTAGA...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | TATGCAGGGGGAAACAGCCAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCCTGCAGAATGAGGGTTaGGCTGATAGAATGTCAATT | + |
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Preference number: 4 (lower is better) Translates to: YAGGNSQATLHLSSIRNLLQNEG*ADRMSI Trigger: AATTGACATTCTATCAGCCCAACCCTCATTCTGCAG...GAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTGGCTGTTTCCCCCTGCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | GGTTGGGCTGATAGAATGTCAATTAGGGGAGACAGGATACAGGGTGAGGGAACAGAACCTCTCTTCAAGTaGTCTTTTGTCATCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GWADRMSIRGDRIQGEGTEPLFK*SFVISV Trigger: AACAGAGATGACAAAAGACCACTTGAAGAGAGGTTC...TGTTCCCTCACCCTGTATCCTGTCTCCCCTAATTGACATTCTATCAGCCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CCA 90 bp | CAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCTCTTCAAGTGGTCTTTTGCAGCACAAGTTTTCCTaGATGGTAGGCAGAATCAAG | + |
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Preference number: 4 (lower is better) Translates to: QATLHLSSIRNLSSSGLLQHKFS*MVGRIK Trigger: CTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTG...CAAAAGACCACTTGAAGAGAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS GCA 90 bp | ACCGGTCAGGTGGGCGTTTCCTGTGGGCGTCTCCAACTCCGCAGGTaGTGGACGGAAGTCAGGGTTCTAATCCTCTGCGCGCTCTGCGAC | + |
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Preference number: 5 (lower is better) Translates to: TGQVGVSCGRLQLRR*WTEVRVLILCALCD Trigger: GTCGCAGAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCAGCACCTGCGGAGTTGGAGACGCCCACAGGAAACGCCCACCTGACCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS GCA 90 bp | CTCCAACTCCGCAGGTGCTGGACGGAAGTCAGGGTTCTAATCCTCTaGGCGCTCTGCGACCTTGGCAAGCCCTTTGCCCACTCTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LQLRRCWTEVRVLIL*ALCDLGKPFAHSGP Trigger: AGGCCCAGAGTGGGCAAAGGGCTTGCCAAGGTCGCAGAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCAGCACCTGCGGAGTTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS CCA 90 bp | GGTCAGGTGGGCGTTTCCTGTGGGCGTCTCCAACTCCGCAGGTGCTaGACGGAAGTCAGGGTTCTAATCCTCTGCGCGCTCTGCGACCTT | + |
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Preference number: 5 (lower is better) Translates to: GQVGVSCGRLQLRRC*TEVRVLILCALCDL Trigger: AAGGTCGCAGAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCAGCACCTGCGGAGTTGGAGACGCCCACAGGAAACGCCCACCTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS CCA 90 bp | CTGGACGGAAGTCAGGGTTCTAATCCTCTGCGCGCTCTGCGACCTTaGCAAGCCCTTTGCCCACTCTGGGCCTCAGGATCCACCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LDGSQGSNPLRALRP*QALCPLWASGSTSV Trigger: TACCGAGGTGGATCCTGAGGCCCAGAGTGGGCAAAGGGCTTGCCAAGGTCGCAGAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS TCA 90 bp | GGGGGAGGGGGAACAGGTGGCCTCACTTCTTTGGTAAATATTCCTTaGCCATACACAGTCCTGAGCCCTCTGAGGGTGGGAGGCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGGGTGGLTSLVNIP*PYTVLSPLRVGGAP Trigger: CGGCGCGCCTCCCACCCTCAGAGGGCTCAGGACTGTGTATGGTCAAGGAATATTTACCAAAGAAGTGAGGCCACCTGTTCCCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS GCA 90 bp | TCTCCTATCTGTGAGAAGAAGCCGCCCACTGCCTCCTGGTTCTCCTaGCGGTACTTGATGGCCCGAGCCCAGTTGTTCCCCCACTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: SPICEKKPPTASWFS*RYLMARAQLFPHSI Trigger: GATCGAGTGGGGGAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAACCAGGAGGCAGTGGGCGGCTTCTTCTCACAGATAGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS CCA 90 bp | CTTCATTGTCCTTGGAATAGAAACCGGTCAGGTGGGCGTTTCCTGTaGGCGTCTCCAACTCCGCAGGTGCTGGACGGAAGTCAGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHCPWNRNRSGGRFL*ASPTPQVLDGSQGS Trigger: AGAACCCTGACTTCCGTCCAGCACCTGCGGAGTTGGAGACGCCCACAGGAAACGCCCACCTGACCGGTTTCTATTCCAAGGACAATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS GCA 90 bp | GTGTGTTCCCCACCCAAGCAGGGGATGGGATGTATGGATGCAGGGTaGTCACGTGAGGCTGTTGTAGGCATCCAGGTATTCAGGCTTTAC | + |
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Preference number: 5 (lower is better) Translates to: VCSPPKQGMGCMDAG*SREAVVGIQVFRLY Trigger: GTAAAGCCTGAATACCTGGATGCCTACAACAGCCTCACGTGAGCACCCTGCATCCATACATCCCATCCCCTGCTTGGGTGGGGAACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496944.1 |
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| CDS TCA 90 bp | CCCACCCAAGCAGGGGATGGGATGTATGGATGCAGGGTGCTCACGTaGGGCTGTTGTAGGCATCCAGGTATTCAGGCTTTACATTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PTQAGDGMYGCRVLT*GCCRHPGIQALHCE Trigger: TTCACAATGTAAAGCCTGAATACCTGGATGCCTACAACAGCCTCACGTGAGCACCCTGCATCCATACATCCCATCCCCTGCTTGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496944.1 |
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| CDS CCA 90 bp | TCCCAGCTGTCCAAAAGCCCCACTGCTCTGTGCTGTAACATCTCATaGCAGGCACTATCAGAACTTTGCAGCTTCATTCCTGGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQLSKSPTALCCNIS*QALSELCSFIPGLQ Trigger: CTGCAGCCCAGGAATGAAGCTGCAAAGTTCTGATAGTGCCTGCCATGAGATGTTACAGCACAGAGCAGTGGGGCTTTTGGACAGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS CCA 90 bp | TTTCCCACGGTGTCAGCTTTATCCCTAATTATTGGGCAGTCTAGGTaGGGCGCTTATGCCACTCCTCTTTCCCAGCTGTCCAAAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPTVSALSLIIGQSR*GAYATPLSQLSKSP Trigger: GGGGCTTTTGGACAGCTGGGAAAGAGGAGTGGCATAAGCGCCCCACCTAGACTGCCCAATAATTAGGGATAAAGCTGACACCGTGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS-3UTR CAA 90 bp | TTCCATCAGCAATTCCAGCACAAGTTTTCCTGGATGGTAGGCAGAATCAAGCTAAGCCGCGGAGCCATGTaGGAGCCGCAAAGGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHQQFQHKFSWMVGRIKLSRGAM*EPQRLQ Trigger: CTGCAACCTTTGCGGCTCCAACATGGCTCCGCGGCT...TAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS GCA 90 bp | TATGCCACTCCTCTTTCCCAGCTGTCCAAAAGCCCCACTGCTCTGTaGTGTAACATCTCATGGCAGGCACTATCAGAACTTTGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YATPLSQLSKSPTAL*CNISWQALSELCSF Trigger: GAAGCTGCAAAGTTCTGATAGTGCCTGCCATGAGATGTTACAGCACAGAGCAGTGGGGCTTTTGGACAGCTGGGAAAGAGGAGTGGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS-3UTR CAA 90 bp | TTCCATCAGCAATTCCAGCACAAGTTTTCCTGGATGGTAGGCAGAATCAAGCTAATGGCCCGAGCCCAGTaGTTCCCCCACTCGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: FHQQFQHKFSWMVGRIKLMARAQ*FPHSIM Trigger: CATGATCGAGTGGGGGAACAACTGGGCTCGGGCCAT...TAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CAA 90 bp | TTCCATCAGCAATTCCAGCACAAGTTTTCCTGGATGGTAGGCAGAATCAAGCTATTCTCCTGCCGGTACTaGATGGCCCGAGCCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHQQFQHKFSWMVGRIKLFSCRY*MARAQL Trigger: CAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAA...TAGCTTGATTCTGCCTACCATCCAGGAAAACTTGTGCTGGAATTGCTGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CAA 90 bp | CAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCTCTTCAAGTGGTCTTTTGCACTGTCTGTCGGGGTaGCCTGAGGGAGAAGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: QATLHLSSIRNLSSSGLLHCLSG*PEGEGE Trigger: TTCCCCTTCTCCCTCAGGCAACCCCGACAGACAGTG...CAAAAGACCACTTGAAGAGAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CAA 90 bp | CAAGCCACTCTCCATCTGTCTAGTATTAGGAACCTCTCTTCAAGTGGTCTTTTGATCATGGTTCCTGGCTaGAGCTTGTATGTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QATLHLSSIRNLSSSGLLIMVPG*SLYVLS Trigger: GCTGAGGACATACAAGCTCAAGCCAGGAACCATGAT...CAAAAGACCACTTGAAGAGAGGTTCCTAATACTAGACAGATGGAGAGTGGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CAA 90 bp | CTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCAGTACTCCTTATTGTTTTaGAGCTTGTTCATGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSFIQGNQKLLLAGGGRQYSLLF*SLFMQS Trigger: GGACTGCATGAACAAGCTCAAAAACAATAAGGAGTA...CTGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS-3UTR CAA 90 bp | ACTATCTTTCATTCAGGGAAATCAGAAACTACTTCTAGCAGGGGGAGGGAGGCATCCAGGTACTCCTTATaGTTTTTGAGCTTGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: TIFHSGKSETTSSRGREASRYSL*FLSLFM Trigger: CATGAACAAGCTCAAAAACAATAAGGAGTACCTGGA...TGCCTCCCTCCCCCTGCTAGAAGTAGTTTCTGATTTCCCTGAATGAAAGATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS TCA 72 bp | AGCCGCCCACTGCCTCCTGGTTCTCCTGCCGGTACTTaGTGGCCCGAGCCCAGTTGTTCCCCCACTCGATCA | + |
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Preference number: 6 (lower is better) Translates to: SRPLPPGSPAGT*WPEPSCSPTRS Trigger: TGATCGAGTGGGGGAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAACCAGGAGGCAGTGGGCGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS CAA 72 bp | AAGCCGCCCACTGCCTCCTGGTTCTCCTGCCGGTACTaGATGGCCCGAGCCCAGTTGTTCCCCCACTCGATC | + |
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Preference number: 6 (lower is better) Translates to: KPPTASWFSCRY*MARAQLFPHSI Trigger: GATCGAGTGGGGGAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAACCAGGAGGCAGTGGGCGGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216121.12 |
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| CDS GCA 72 bp | CGCAGGTGCTGGACGGAAGTCAGGGTTCTAATCCTCTaGGCGCTCTGCGACCTTGGCAAGCCCTTTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RRCWTEVRVLIL*ALCDLGKPFAH Trigger: GTGGGCAAAGGGCTTGCCAAGGTCGCAGAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCAGCACCTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS CCA 72 bp | GGCGTTTCCTGTGGGCGTCTCCAACTCCGCAGGTGCTaGACGGAAGTCAGGGTTCTAATCCTCTGCGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GVSCGRLQLRRC*TEVRVLILCAL Trigger: GAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCAGCACCTGCGGAGTTGGAGACGCCCACAGGAAACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS GCA 72 bp | TGGACGGAAGTCAGGGTTCTAATCCTCTGCGCGCTCTaGGACCTTGGCAAGCCCTTTGCCCACTCTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: WTEVRVLILCAL*DLGKPFAHSGP Trigger: AGGCCCAGAGTGGGCAAAGGGCTTGCCAAGGTCGCAGAGCGCGCAGAGGATTAGAACCCTGACTTCCGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS CCA 72 bp | CCTTGGAATAGAAACCGGTCAGGTGGGCGTTTCCTGTaGGCGTCTCCAACTCCGCAGGTGCTGGACGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PWNRNRSGGRFL*ASPTPQVLDGS Trigger: ACTTCCGTCCAGCACCTGCGGAGTTGGAGACGCCCACAGGAAACGCCCACCTGACCGGTTTCTATTCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437094.5 |
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| CDS CAA 90 bp | TGGGGGAGGGGGAACAGGTGGCCTCACTTCTTTGGTAAATATTCCTaGACCATACACAGTCCTGAGCCCTCTGAGGGTGGGAGGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: WGRGNRWPHFFGKYS*TIHSPEPSEGGRRA Trigger: GGCGCGCCTCCCACCCTCAGAGGGCTCAGGACTGTGTATGGTCAAGGAATATTTACCAAAGAAGTGAGGCCACCTGTTCCCCCTCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS GCA 72 bp | CCACCCAAGCAGGGGATGGGATGTATGGATGCAGGGTaGTCACGTGAGGCTGTTGTAGGCATCCAGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: PPKQGMGCMDAG*SREAVVGIQVF Trigger: GAATACCTGGATGCCTACAACAGCCTCACGTGAGCACCCTGCATCCATACATCCCATCCCCTGCTTGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496944.1 |
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| CDS TCA 72 bp | GCAGGGGATGGGATGTATGGATGCAGGGTGCTCACGTaGGGCTGTTGTAGGCATCCAGGTATTCAGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: AGDGMYGCRVLT*GCCRHPGIQAL Trigger: TAAAGCCTGAATACCTGGATGCCTACAACAGCCTCACGTGAGCACCCTGCATCCATACATCCCATCCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496944.1 |
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| CDS CCA 72 bp | GTGTCAGCTTTATCCCTAATTATTGGGCAGTCTAGGTaGGGCGCTTATGCCACTCCTCTTTCCCAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSALSLIIGQSR*GAYATPLSQLS Trigger: GGACAGCTGGGAAAGAGGAGTGGCATAAGCGCCCCACCTAGACTGCCCAATAATTAGGGATAAAGCTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS TCA 72 bp | GGAACAGGTGGCCTCACTTCTTTGGTAAATATTCCTTaGCCATACACAGTCCTGAGCCCTCTGAGGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTGGLTSLVNIP*PYTVLSPLRVG Trigger: TCCCACCCTCAGAGGGCTCAGGACTGTGTATGGTCAAGGAATATTTACCAAAGAAGTGAGGCCACCTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS GCA 72 bp | CCTCTTTCCCAGCTGTCCAAAAGCCCCACTGCTCTGTaGTGTAACATCTCATGGCAGGCACTATCAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PLSQLSKSPTAL*CNISWQALSEL Trigger: AAGTTCTGATAGTGCCTGCCATGAGATGTTACAGCACAGAGCAGTGGGGCTTTTGGACAGCTGGGAAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494966.1 |
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| CDS TCA 72 bp | TGTCCTTGGAATAGAAATTCTTTGGTAAATATTCCTTaGCCATACACAGTCCTGAGCCCTCTGAGGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CPWNRNSLVNIP*PYTVLSPLRVG Trigger: TCCCACCCTCAGAGGGCTCAGGACTGTGTATGGTCAAGGAATATTTACCAAAGAATTTCTATTCCAAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415100.5 |
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