Pregenerated sensors for NIPBL-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000285967Ensembl transcript IDs: ENST00000647750.1, ENST00000647824.1, ENST00000649921.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACGGGCGTAGAGGAGAGCTGCCGCCTCCCGGCTGCTGGGCCCGGGTaGCGCGCGGCGCGGCCGAGGACGCGAGCCCAAGTGGCGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGVEESCRLPAAGPG*RAARPRTRAQVAAA Trigger: CGCTGCCGCCACTTGGGCTCGCGTCCTCGGCCGCGCCGCGCGGCACCCGGGCCCAGCAGCCGGGAGGCGGCAGCTCTCCTCTACGCCCGT 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS GCA 90 bp | GGCAACATCCACAGCCGCCCTGAGGGGACGGGCGTAGAGGAGAGCTaGCGCCTCCCGGCTGCTGGGCCCGGGTGCCGCGCGGCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GNIHSRPEGTGVEES*RLPAAGPGCRAARP Trigger: CGGCCGCGCCGCGCGGCACCCGGGCCCAGCAGCCGGGAGGCGGCAGCTCTCCTCTACGCCCGTCCCCTCAGGGCGGCTGTGGATGTTGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS TCA 90 bp | ATCAGCTGGCCGCAGGCCCGCGGGTCGCCCGCAGTCACCGGTGGCTaGGTCGGGGCCGGCGGTTCTCCCCGCGCGCTCGGCTCCACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISWPQARGSPAVTGG*VGAGGSPRALGSTH Trigger: GTGGGTGGAGCCGAGCGCGCGGGGAGAACCGCCGGCCCCGACTCAGCCACCGGTGACTGCGGGCGACCCGCGGGCCTGCGGCCAGCTGAT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000647750.1 ENST00000647824.1 ENST00000649921.1 |
||
| CDS GCA 90 bp | TCCAGCCGCCGCCGTCGGCGACCTGAGAGCCCGTCCGGGCCTGAGTaGCCCCCACGCTCACGACCACCACCGAACTCGGGCCCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRRRRRPESPSGPE*PPRSRPPPNSGPAP Trigger: AGGAGCGGGGCCCGAGTTCGGTGGTGGTCGTGAGCGTGGGGGGCACTCAGGCCCGGACGGGCTCTCAGGTCGCCGACGGCGGCGGCTGGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS GCA 90 bp | CAAGCCCTGTGGACGACGCTCAGGGAAGAGTCCTACTCGCAAGGATaGCAGGGCAGGCCCGCCCCCACCCTCAACGGCGCGCGGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: QALWTTLREESYSQG*QGRPAPTLNGARGL Trigger: AAGTCCCCGCGCGCCGTTGAGGGTGGGGGCGGGCCTGCCCTGGCATCCTTGCGAGTAGGACTCTTCCCTGAGCGTCGTCCACAGGGCTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 90 bp | GTCGCTCTGAAGCATCGACAATACTGGCAACATCCACAGCCGCCCTaGGGGGACGGGCGTAGAGGAGAGCTGCCGCCTCCCGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VALKHRQYWQHPQPP*GDGRRGELPPPGCW Trigger: CCAGCAGCCGGGAGGCGGCAGCTCTCCTCTACGCCCGTCCCCTCAGGGCGGCTGTGGATGTTGCCAGTATTGTCGATGCTTCAGAGCGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS TCA 90 bp | ACAGAGGAGAGCCGGCCCGCCTGTGTCGCAGGGCAAACGTCGCTCTaGAGCATCGACAATACTGGCAACATCCACAGCCGCCCTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TEESRPACVAGQTSL*SIDNTGNIHSRPEG Trigger: CCCCTCAGGGCGGCTGTGGATGTTGCCAGTATTGTCGATGCTTCAGAGCGACGTTTGCCCTGCGACACAGGCGGGCCGGCTCTCCTCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS CCA 90 bp | CATTTAAAACGGGCATCATCGCCATCGAATCGCGGGCGTCCTCTGTaGGGCCGCCCGGAGATCGGCTCCCTAAAGCTAACGACGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLKRASSPSNRGRPL*GRPEIGSLKLTTTW Trigger: CCAGGTCGTCGTTAGCTTTAGGGAGCCGATCTCCGGGCGGCCCCACAGAGGACGCCCGCGATTCGATGGCGATGATGCCCGTTTTAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS CCA 90 bp | CCGAGTGACACGAGCAAAATCCTGAAGGTGAAGGAGCAAGCCCTGTaGACGACGCTCAGGGAAGAGTCCTACTCGCAAGGATGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSDTSKILKVKEQAL*TTLREESYSQGCQG Trigger: GCCCTGGCATCCTTGCGAGTAGGACTCTTCCCTGAGCGTCGTCCACAGGGCTTGCTCCTTCACCTTCAGGATTTTGCTCGTGTCACTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 90 bp | GGGCGAGCTTCTCGCTCGCGCAGCGTCGCCTACAGGCCTTTATCCTaGCCGTTAGAGAAGAACCCAAACCTCTGCCGACAAAAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GRASRSRSVAYRPLS*PLEKNPNLCRQKAK Trigger: TTTTGCTTTTTGTCGGCAGAGGTTTGGGTTCTTCTCTAACGGTCAGGATAAAGGCCTGTAGGCGACGCTGCGCGAGCGAGAAGCTCGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000647750.1 ENST00000647824.1 ENST00000649921.1 |
||
| CDS GCA 90 bp | GATTCCAATTCAATCCAGCCGACAGTCGTCTTCACCTCCAAAGGTTaGGTTCTTATTCGCAGAAATAACACGCAGTCGGGCGTAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSNSIQPTVVFTSKG*VLIRRNNTQSGVRS Trigger: GGACCTTACGCCCGACTGCGTGTTATTTCTGCGAATAAGAACGCAACCTTTGGAGGTGAAGACGACTGTCGGCTGGATTGAATTGGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS TCA 90 bp | AGTTTGAGACTCAGAAGAGCAAACATAATCGGCCCAGTATGGATATaGTCATTTGATGCACTGTCCTCGGGCATGCTCATTTACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLRRANIIGPVWI*SFDALSSGMLIYRS Trigger: GCTTCTGTAAATGAGCATGCCCGAGGACAGTGCATCAAATGATCATATCCATACTGGGCCGATTATGTTTGCTCTTCTGAGTCTCAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 90 bp | ACTCAGAAGAGCAAACATAATCGGCCCAGTATGGATATGATCATTTaGTGCACTGTCCTCGGGCATGCTCATTTACAGAAGCCTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TQKSKHNRPSMDMII*CTVLGHAHLQKPKN Trigger: GTTTTTAGGCTTCTGTAAATGAGCATGCCCGAGGACAGTGCATCAAATGATCATATCCATACTGGGCCGATTATGTTTGCTCTTCTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS CCA 90 bp | GTTCTTGAAGCAAGGAGGCAATTTAAAGTCAGAATAAAGGTTTACTaGGCTATCCTCAATGGACAAGTGGAGGATGTAAGTCACCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VLEARRQFKVRIKVY*AILNGQVEDVSHLI Trigger: AATCAGGTGACTTACATCCTCCACTTGTCCATTGAGGATAGCCCAGTAAACCTTTATTCTGACTTTAAATTGCCTCCTTGCTTCAAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 90 bp | AAATTCTCACTTTTAATGTATTTTGAAAGACAGAGGACGACAAGATaGAGAATGCAGTTTGAGACTCAGAAGAGCAAACATAATCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KFSLLMYFERQRTTR*RMQFETQKSKHNRP Trigger: GGGCCGATTATGTTTGCTCTTCTGAGTCTCAAACTGCATTCTTCATCTTGTCGTCCTCTGTCTTTCAAAATACATTAAAAGTGAGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 90 bp | ATATCTAATGCTAACCTAAGTGTAAGCAAACAGCAAACTAAATGGTaGATTAAAATATCCACACCAAGCCTGACCTCAGCTTTCATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISNANLSVSKQQTKW*IKISTPSLTSAFIE Trigger: TTCAATGAAAGCTGAGGTCAGGCTTGGTGTGGATATTTTAATTCACCATTTAGTTTGCTGTTTGCTTACACTTAGGTTAGCATTAGATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS GCA 72 bp | CGCCGTCGGCGACCTGAGAGCCCGTCCGGGCCTGAGTaGCCCCCACGCTCACGACCACCACCGAACTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRPESPSGPE*PPRSRPPPNSG Trigger: GCCCGAGTTCGGTGGTGGTCGTGAGCGTGGGGGGCACTCAGGCCCGGACGGGCTCTCAGGTCGCCGACGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS GCA 72 bp | TGGACGACGCTCAGGGAAGAGTCCTACTCGCAAGGATaGCAGGGCAGGCCCGCCCCCACCCTCAACGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: WTTLREESYSQG*QGRPAPTLNGA Trigger: CGCGCCGTTGAGGGTGGGGGCGGGCCTGCCCTGGCATCCTTGCGAGTAGGACTCTTCCCTGAGCGTCGTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS CCA 72 bp | CGGGCATCATCGCCATCGAATCGCGGGCGTCCTCTGTaGGGCCGCCCGGAGATCGGCTCCCTAAAGCTAACG | + |
|
Preference number: 6 (lower is better) Translates to: RASSPSNRGRPL*GRPEIGSLKLT Trigger: CGTTAGCTTTAGGGAGCCGATCTCCGGGCGGCCCCACAGAGGACGCCCGCGATTCGATGGCGATGATGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS CCA 72 bp | GTAGTCCCAGGTACTGGGGAGGCTGAGGCAGAAGCATaGCGTGAACCGGGAGGCGGAGCTTGCAGTGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VVPGTGEAEAEA*REPGGGACSEP Trigger: CGGCTCACTGCAAGCTCCGCCTCCCGGTTCACGCCATGCTTCTGCCTCAGCCTCCCCAGTACCTGGGACTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647824.1 ENST00000649921.1 |
||
| CDS TCA 72 bp | AAGCATCGACAATACTGGCAACATCCACAGCCGCCCTaGGGGGACGGGCGTAGAGGAGAGCTGCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KHRQYWQHPQPP*GDGRRGELPPP Trigger: GGGAGGCGGCAGCTCTCCTCTACGCCCGTCCCCTCAGGGCGGCTGTGGATGTTGCCAGTATTGTCGATGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS CCA 72 bp | AACGGCGCGCGGGGACTTCTGCCGCAGTCAAGGCTTTaGCTCACTCCCCTCAAGACGGGAAGCCATTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NGARGLLPQSRL*LTPLKTGSHSQ Trigger: CTGCGAATGGCTTCCCGTCTTGAGGGGAGTGAGCCAAAGCCTTGACTGCGGCAGAAGTCCCCGCGCGCCGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS CAA 72 bp | CAACGGCGCGCGGGGACTTCTGCCGCAGTCAAGGCTTaGGCTCACTCCCCTCAAGACGGGAAGCCATTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QRRAGTSAAVKA*AHSPQDGKPFA Trigger: TGCGAATGGCTTCCCGTCTTGAGGGGAGTGAGCCAAAGCCTTGACTGCGGCAGAAGTCCCCGCGCGCCGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 72 bp | AGCCGGCCCGCCTGTGTCGCAGGGCAAACGTCGCTCTaGAGCATCGACAATACTGGCAACATCCACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRPACVAGQTSL*SIDNTGNIHSR Trigger: GCGGCTGTGGATGTTGCCAGTATTGTCGATGCTTCAGAGCGACGTTTGCCCTGCGACACAGGCGGGCCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647750.1 ENST00000649921.1 |
||
| CDS CCA 72 bp | CCGAACCTAAAGAGGAAAACGATGTTTGAAATCAGCTaGCCGCAGGCCCGCGGGTCGCCCGCAGTCACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PNLKRKTMFEIS*PQARGSPAVTG Trigger: ACCGGTGACTGCGGGCGACCCGCGGGCCTGCGGCCAGCTGATTTCAAACATCGTTTTCCTCTTTAGGTTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000647750.1 ENST00000647824.1 ENST00000649921.1 |
||
| CDS TCA 72 bp | TCTCGCTCGCGCAGCGTCGCCTACAGGCCTTTATCCTaGCCGTTAGAGAAGAACCCAAACCTCTGCCGACAA | + |
|
Preference number: 6 (lower is better) Translates to: SRSRSVAYRPLS*PLEKNPNLCRQ Trigger: TTGTCGGCAGAGGTTTGGGTTCTTCTCTAACGGTCAGGATAAAGGCCTGTAGGCGACGCTGCGCGAGCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000647750.1 ENST00000647824.1 ENST00000649921.1 |
||
| CDS GCA 72 bp | TCAATCCAGCCGACAGTCGTCTTCACCTCCAAAGGTTaGGTTCTTATTCGCAGAAATAACACGCAGTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIQPTVVFTSKG*VLIRRNNTQSG Trigger: GCCCGACTGCGTGTTATTTCTGCGAATAAGAACGCAACCTTTGGAGGTGAAGACGACTGTCGGCTGGATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000647750.1 ENST00000647824.1 ENST00000649921.1 |
||
| CDS TCA 72 bp | AAATGGTGTGAGGTAAGGGTCCCAGTCTTTTGCATGTaGGGTAAGGGTCCTAGTCTTTTGCAGTTGTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KWCEVRVPVFCM*GKGPSLLQLSQ Trigger: CTGAGACAACTGCAAAAGACTAGGACCCTTACCTCACATGCAAAAGACTGGGACCCTTACCTCACACCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||
| CDS TCA 72 bp | CTCAGAAGAGCAAACATAATCGGCCCAGTATGGATATaGTCATTTGATGCACTGTCCTCGGGCATGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LRRANIIGPVWI*SFDALSSGMLI Trigger: AATGAGCATGCCCGAGGACAGTGCATCAAATGATCATATCCATACTGGGCCGATTATGTTTGCTCTTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 72 bp | AGCAAACATAATCGGCCCAGTATGGATATGATCATTTaGTGCACTGTCCTCGGGCATGCTCATTTACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKHNRPSMDMII*CTVLGHAHLQK Trigger: CTTCTGTAAATGAGCATGCCCGAGGACAGTGCATCAAATGATCATATCCATACTGGGCCGATTATGTTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 72 bp | TTGCTGGGTCATATAGTAACTAGATGTTTAATCACTTaGGGAACTGCCAGACTGTTTTCCAAAGTGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLGHIVTRCLIT*GTARLFSKVAA Trigger: TGCAGCCACTTTGGAAAACAGTCTGGCAGTTCCTCAAGTGATTAAACATCTAGTTACTATATGACCCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||
| CDS CCA 72 bp | GCAAGGAGGCAATTTAAAGTCAGAATAAAGGTTTACTaGGCTATCCTCAATGGACAAGTGGAGGATGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARRQFKVRIKVY*AILNGQVEDVS Trigger: ACTTACATCCTCCACTTGTCCATTGAGGATAGCCCAGTAAACCTTTATTCTGACTTTAAATTGCCTCCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS GCA 72 bp | TGTATTTTGAAAGACAGAGGACGACAAGATGAAGAATaGAGTTTGAGACTCAGAAGAGCAAACATAATCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CILKDRGRQDEE*SLRLRRANIIG Trigger: GCCGATTATGTTTGCTCTTCTGAGTCTCAAACTGCATTCTTCATCTTGTCGTCCTCTGTCTTTCAAAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS GCA 72 bp | AGCAGATTGACTGTAGCAGCTGCAGTTACCTGGACATaGAAAATTACTAGTTTACCAGTAACATTTAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLTVAAAVTWT*KITSLPVTFKK Trigger: TTTCTTAAATGTTACTGGTAAACTAGTAATTTTGCATGTCCAGGTAACTGCAGCTGCTACAGTCAATCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS CAA 72 bp | GTGTCAGTTGATGGACATTTGGGTTGTTTCCACCTTTaGGTGATTCTGAATAATGCTTCTGTAAACAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: VSVDGHLGCFHL*VILNNASVNKC Trigger: ACATTTGTTTACAGAAGCATTATTCAGAATCACCAAAAGGTGGAAACAACCCAAATGTCCATCAACTGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||
| CDS CAA 72 bp | CACAATACAATTCATATAACACGAATTTCGTCCCGGTaGAGTAAAATTCCGCTTACCTACTGCACTTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: HNTIHITRISSR*SKIPLTYCTFY Trigger: GTAAAAAGTGCAGTAGGTAAGCGGAATTTTACTCAACCGGGACGAAATTCGTGTTATATGAATTGTATTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS CAA 90 bp | CTTTTGCATGTGTCAGTTGATGGACATTTGGGTTGTTTCCACCTTTaGGTGATTCTGAATAATGCTTCTGTAAACAAATGTGTACAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLHVSVDGHLGCFHL*VILNNASVNKCVQV Trigger: AACTTGTACACATTTGTTTACAGAAGCATTATTCAGAATCACCAAAAGGTGGAAACAACCCAAATGTCCATCAACTGACACATGCAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||
| CDS CAA 90 bp | ACAAATGTGTACAAGTTTCTGTGTGGACATATGGTTTCATTTCTCTaGGGTATATACCTAGTAGTAGAATTGCTGGGTCATATAGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: TNVYKFLCGHMVSFL*GIYLVVELLGHIVT Trigger: AGTTACTATATGACCCAGCAATTCTACTACTAGGTATATACCCAAGAGAAATGAAACCATATGTCCACACAGAAACTTGTACACATTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||
| CDS TCA 72 bp | CTTTTAATGTATTTTGAAAGACAGAGGACGACAAGATaGAGAATGCAGTTTGAGACTCAGAAGAGCAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: LLMYFERQRTTR*RMQFETQKSKH Trigger: ATGTTTGCTCTTCTGAGTCTCAAACTGCATTCTTCATCTTGTCGTCCTCTGTCTTTCAAAATACATTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649921.1 |
||
| CDS TCA 72 bp | ATTCTGGCTATCATAGTGAGAATGAAGCCTTGTAAGTaGAGAAGAATGAAAACCTTGCAGTTTCTTTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILAIIVRMKPCK*RRMKTLQFLYL Trigger: CAAATAAAGAAACTGCAAGGTTTTCATTCTTCTTCACTTACAAGGCTTCATTCTCACTATGATAGCCAGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||
| CDS CCA 72 bp | AATGCTTCTGTAAACAAATGTGTACAAGTTTCTGTGTaGACATATGGTTTCATTTCTCTTGGGTATATACCT | + |
|
Preference number: 6 (lower is better) Translates to: NASVNKCVQVSV*TYGFISLGYIP Trigger: AGGTATATACCCAAGAGAAATGAAACCATATGTCCACACAGAAACTTGTACACATTTGTTTACAGAAGCATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647750.1 |
||