RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIPBL (Homo sapiens)

Ensembl gene IDs: ENSG00000164190

Ensembl transcript IDs: ENST00000282516.13, ENST00000448238.2, ENST00000503274.1, ENST00000504430.5, ENST00000505998.5, ENST00000509429.1, ENST00000514335.1, ENST00000652901.1

Found 599 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCATCACGGCGCTTAGCCTCAGTCCAGGAGCCACTGTAGGAGCCTaGCATCCACTGAACACTGAAGCCACTGCTGGTTTTCTGCACTAC +
Preference number: 1 (lower is better)
Translates to: AITALSLSPGATVGA*HPLNTEATAGFLHY
Trigger: GTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATGGCAGGCTCCTACAGTGGCTCCTGGACTGAGGCTAAGCGCCGTGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR TCA 90 bp CCTCAGTCCAGGAGCCACTGTAGGAGCCTGCCATCCACTGAACACTaGAGCCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: PQSRSHCRSLPSTEH*SHCWFSALLLQFVV
Trigger: GACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATGGCAGGCTCCTACAGTGGCTCCTGGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR GCA 90 bp CATCCACTGAACACTGAAGCCACTGCTGGTTTTCTGCACTACTCTTaGAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGAT +
Preference number: 1 (lower is better)
Translates to: HPLNTEATAGFLHYS*NLWSIFVLWTANSD
Trigger: ATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CCA 90 bp AACACTGAAGCCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTaGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACATCCAT +
Preference number: 1 (lower is better)
Translates to: NTEATAGFLHYSCNL*SIFVLWTANSDDIH
Trigger: ATGGATGTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CCA 90 bp GGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTaGACAGCAAATAGCGATGACATCCATGACGTCAACACTTTCATT +
Preference number: 1 (lower is better)
Translates to: GFLHYSCNLWSIFVL*TANSDDIHDVNTFI
Trigger: AATGAAAGTGTTGACGTCATGGATGTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR TCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATGAGCCTGCCATCCACTaGACACTGAAGCCACTGCTG +
Preference number: 2 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHEPAIH*TLKPLL
Trigger: CAGCAGTGGCTTCAGTGTTCAGTGGATGGCAGGCTC...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CAA 90 bp TCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTaGCCCAACATTTCCTTCTTTTGTTCCTGCATCCCAGGTTCCACT +
Preference number: 2 (lower is better)
Translates to: SVSAAQQRRELPQKC*PNISFFCSCIPGST
Trigger: AGTGGAACCTGGGATGCAGGAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR-3UTR CCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCTCGATCTTTGTACTTTaGACAGCAAATAGCGATGAC +
Preference number: 2 (lower is better)
Translates to: FNSVYPRHQFAAITALSLSIFVL*TANSDD
Trigger: GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGA...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAAGAATCTGTTTCTGCTaGACAACAGCGAAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: NELRICFCCTTAKGAPTKRICFC*TTAKGA
Trigger: AGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACTGAGAATCTGTTTCTaGTGCACAACAGCGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLRICF*CTTAKG
Trigger: TCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAACTTTCATTCATCTGTaGTGCCAACTCCGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: NELRICFCCTTAKGAPTKTFIHL*CQLRRV
Trigger: GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTGCTTCCCTGGAAACTaGGCTAAGCTAAAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFCFPGN*AKLKKA
Trigger: GGCTTTCTTTAGCTTAGCCCAGTTTCCAGGGAAGCA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTaGTACTTTGGACAGCAAATAGCGATGACATCCATGACGTCAACA +
Preference number: 2 (lower is better)
Translates to: PLLVFCTTLAICGRS*YFGQQIAMTSMTST
Trigger: TGTTGACGTCATGGATGTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CAA 90 bp CTGAACACTGAAGCCACTGCTGGTTTTCTGCACTACTCTTGCAATTaGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACATC +
Preference number: 2 (lower is better)
Translates to: LNTEATAGFLHYSCN*WSIFVLWTANSDDI
Trigger: GATGTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CAA 90 bp GCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTaGTTCCTGCATCCCAGGTTCCACTTACTCTTCATAAAACTGATT +
Preference number: 2 (lower is better)
Translates to: AKGAPTKMFAQHFLL*FLHPRFHLLFIKLI
Trigger: AATCAGTTTTATGAAGAGTAAGTGGAACCTGGGATGCAGGAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTCCCACAAAAATGTTTaGCCAACATTTCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFSHKNV*PTFPSF
Trigger: AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR TCA 72 bp AGGAGCCACTGTAGGAGCCTGCCATCCACTGAACACTaGAGCCACTGCTGGTTTTCTGCACTACTCTTGCAA +
Preference number: 3 (lower is better)
Translates to: RSHCRSLPSTEH*SHCWFSALLLQ
Trigger: TTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATGGCAGGCTCCTACAGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCAACATTTCCTTCTTTaGTTCCTGCATCCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFQHFLL*FLHPRF
Trigger: GAACCTGGGATGCAGGAACAAAAGAAGGAAATGTTG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTCCCACAAAAATGTTaGCCCAACATTTCCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLPQKC*PNISFF
Trigger: AAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR TCA 72 bp GTCCCATCCTTGGCGGCATACAGGGATCGTAAAGTCTaGACAACTTTATTAGTCAGCTTATTAGCACTCGTT +
Preference number: 3 (lower is better)
Translates to: VPSLAAYRDRKV*TTLLVSLLALV
Trigger: AACGAGTGCTAATAAGCTGACTAATAAAGTTGTTCAGACTTTACGATCCCTGTATGCCGCCAAGGATGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR GCA 72 bp AACACTGAAGCCACTGCTGGTTTTCTGCACTACTCTTaGAATTTGTGGTCGATCTTTGTACTTTGGACAGCA +
Preference number: 3 (lower is better)
Translates to: NTEATAGFLHYS*NLWSIFVLWTA
Trigger: TGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CCA 72 bp GCCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTaGTCGATCTTTGTACTTTGGACAGCAAATAGCGAT +
Preference number: 3 (lower is better)
Translates to: ATAGFLHYSCNL*SIFVLWTANSD
Trigger: ATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CCA 72 bp TGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTaGCGGCATACAGGGATCGTAAAGTCTGAACAACTT +
Preference number: 3 (lower is better)
Translates to: CMYKFISWKSHP*RHTGIVKSEQL
Trigger: AAGTTGTTCAGACTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR CAA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGTTTTCTGCACTACTCTaGCAATTTGTGGTCGATCTT +
Preference number: 3 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKFSALL*QFVVDL
Trigger: AAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAA...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR GCA 72 bp AGTGGGAGTAAAAATGAACTGAGAATCTGTTTCTGCTaGACAACAGCGAAGGGAGCTCCCACAAAAATGTTT +
Preference number: 3 (lower is better)
Translates to: SGSKNELRICFC*TTAKGAPTKMF
Trigger: AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATTTTTACTCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR CCA 72 bp CACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTaGACAGCAAATAGCGATGACATCCATGACGTCAAC +
Preference number: 3 (lower is better)
Translates to: HYSCNLWSIFVL*TANSDDIHDVN
Trigger: GTTGACGTCATGGATGTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTATTTGTGGTCGATCTTaGTACTTTGGACAGCAAATA +
Preference number: 3 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFICGRS*YFGQQI
Trigger: TATTTGCTGTCCAAAGTACAAAGATCGACCACAAAT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR-3UTR CAA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACACTACTCTTGCAATTaGTGGTCGATCTTTGTACTT +
Preference number: 3 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSHYSCN*WSIFVL
Trigger: AAGTACAAAGATCGACCACAAATTGCAAGAGTAGTG...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGGGGGCGTCCCTCCCTaGGGCTTGGTGGTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISGGVPP*GLVVSG
Trigger: ACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCCTCCCTGCGGCTTGGTaGTGTCGGGTGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLLPAAW*CRVSRY
Trigger: GTACCGACTCACCCGACACCACCAAGCCGCAGGGAG...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGAGCCTGCCATCCACTaGACACTGAAGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLEPAIH*TLKPLL
Trigger: CAGCAGTGGCTTCAGTGTTCAGTGGATGGCAGGCTC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGGGGGCGTCCCTCCCTaGGGCTTGGTGGTGTCGGGT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFGGVPP*GLVVSG
Trigger: ACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTCCCTGCGGCTTGGTaGTGTCGGGTGAGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLPAAW*CRVSRY
Trigger: GTACCGACTCACCCGACACCACCAAGCCGCAGGGAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGGGCGAATCGGCGTCTaGATCCAAGGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKGRIGV*IQGEAE
Trigger: CTCGGCCTCCCCTTGGATTCAGACGCCGATTCGCCC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCCCTCCGCCTCACCCCTaGAGTGCCTCCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVPPPHP*SASSSI
Trigger: GATAGAGGAGGAGGCACTTCAGGGGTGAGGCGGAGG...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTCCCTCCCTGCGGCTTaGTGGTGTCGGGTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFSLPAA*WCRVSR
Trigger: CCGACTCACCCGACACCACCAAGCCGCAGGGAGGGA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
3UTR CAA 72 bp TCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTaGCGGCCATCACGGCGCTTAGCCTCAGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SDSLIVSTQGTS*RPSRRLASVQE
Trigger: CTCCTGGACTGAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCTTGGTGGTGTCGGGTaGGTCGGTACCGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFLGGVG*VGTDGG
Trigger: CCCTCCGTCGGTACCGACTCACCCGACACCACCAAG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGGGCGAATCGGCGTCTaGATCCAAGGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFGRIGV*IQGEAE
Trigger: CTCGGCCTCCCCTTGGATTCAGACGCCGATTCGCCC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGTAGAACCCGTCTCCTaGGAAGCTGGTCTATTACCT +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLVEPVS*EAGLLP
Trigger: AGGTAATAGACCAGCTTCTCAGGAGACGGGTTCTAC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTTCGAACCCTAGACTaGTCCCCTCGATGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLRTLD*SPRCRS
Trigger: AGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTAGGCCGAGGCCGCTGTaGCGAGAGACTATAATCCGG +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFRPRPL*RETIIR
Trigger: CCGGATTATAGTCTCTCGCCACAGCGGCCTCGGCCT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCCCAGAGCTTGTCTGTaGTGGCACAAACCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLPRACL*WHKPAG
Trigger: TCCAGCCGGTTTGTGCCACCACAGACAAGCTCTGGG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTGCTGCGACAAACATTaGGCAGCATTTAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISCCDKH*AAFSGR
Trigger: CCGCCCACTAAATGCTGCTCAATGTTTGTCGCAGCA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTCGAACCCTAGACTaGTCCCCTCGATGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLLRTLD*SPRCRS
Trigger: AGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTGGCCACTTCTCCTATaGTCCCCAGAGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISWPLLL*SPELLL
Trigger: CAGAAGAAGCTCTGGGGATCATAGGAGAAGTGGCCA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCAGGACTCGTCTTGTCTaGAACCCCTTACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLRTRLV*NPLQDL
Trigger: AAGATCCTGTAAGGGGTTTCAGACAAGACGAGTCCT...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCAGCATTTGTGCTAGCTaGAACCTCCCCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLSICAS*NLPFFF
Trigger: GAAGAAGAAGGGGAGGTTTCAGCTAGCACAAATGCT...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGAGCCTGCCATCCACTaGACACTGAAGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKEPAIH*TLKPLL
Trigger: CAGCAGTGGCTTCAGTGTTCAGTGGATGGCAGGCTC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCTTCCGTCTCCTCAGTaGGGGGAACATGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFLPSPQ*GEHVEP
Trigger: CGGCTCTACATGTTCCCCGCACTGAGGAGACGGAAG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTTGCCAGGACGGCCTaGAACAAGACTGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLARTA*NKTGMS
Trigger: TGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCAGAATCTGTTTCTGCTaGACAACAGCGAAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLRICFC*TTAKGA
Trigger: AGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCT...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCCTGAGAATCTGTTTCTaGTGCACAACAGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLLRICF*CTTAKG
Trigger: TCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAAGGCCGAGGCCGCTGTaGCGAGAGACTATAATCCGG +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSRPRPL*RETIIR
Trigger: CCGGATTATAGTCTCTCGCCACAGCGGCCTCGGCCT...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTAGAGCTTGTCTGTGGTaGCACAAACCGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFRACLW*HKPAGG
Trigger: CCCTCCAGCCGGTTTGTGCCACCACAGACAAGCTCT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGCTTTGTGGGGCGTATaGACTAGGCACTGGGCTATT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISALWGV*TRHWAI
Trigger: AATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATCCTGCAGGGCTTTGTaGGGCGTATGGACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKSCRAL*GVWTRH
Trigger: GTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGGAGCATACTGGCTGTaGAGATCTCAAGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLGAYWL*RSQGKR
Trigger: TCTTTTCCCTTGAGATCTCCACAGCCAGTATGCTCC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTATCTACACGTTTCCGTaGCTTCCGAGGCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLIYTFP*LPRPGN
Trigger: GTTTCCAGGCCTCGGAAGTCACGGAAACGTGTAGAT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGCTGCGAAATACGTTaGCTCCTCCTCCGCCTCACC +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFRCEIR*LLLRLT
Trigger: GGTGAGGCGGAGGAGGAGTCAACGTATTTCGCAGCG...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCCTTGCCAGGACGGCCTaGAACAAGACTGGTATGTCA +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVLARTA*NKTGMS
Trigger: TGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAG...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGATACCGATGCTTGTTaGATCTGTGGATGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLDTDAC*ICGCVV
Trigger: CACAACACATCCACAGATGCAACAAGCATCGGTATC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTCAACGCACCAGACCTaGCCCCCAACAAATAACTTG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISSTHQT*PPTNNL
Trigger: CAAGTTATTTGTTGGGGGGCAGGTCTGGTGCGTTGA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTGATGGAAGAGGCAGCTaGTTCAGGAGGTCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLDGRGS*FRRSVR
Trigger: TCTCACAGACCTCCTGAACCAGCTGCCTCTTCCATC...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAAGAGCTTGTCTGTGGTaGCACAAACCGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSRACLW*HKPAGG
Trigger: CCCTCCAGCCGGTTTGTGCCACCACAGACAAGCTCT...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATTCCTGCAGGGCTTTGTaGGGCGTATGGACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHSCRAL*GVWTRH
Trigger: GTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGA...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTGTTGATACCTGGTTaGGGCTATGGACAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLLLIPG*GYGQAV
Trigger: CACAGCTTGTCCATAGCCTCAACCAGGTATCAACAG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAGCATGATGATTAGCTaGATTGCCAGACAACGGACC +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISSMMIS*IARQRT
Trigger: GGTCCGTTGTCTGGCAATTCAGCTAATCATCATGCT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGGCCACTTCTCCTATaGTCCCCAGAGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKWPLLL*SPELLL
Trigger: CAGAAGAAGCTCTGGGGATCATAGGAGAAGTGGCCA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGCCATTCAGGCTTATTaGCTGTTGAAAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLAIQAY*LLKEGL
Trigger: AAGACCTTCTTTCAACAGTCAATAAGCCTGAATGGC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGACTTCAACAAGTTTTaGAGCAGTTGCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLDFNKF*SSCSNQ
Trigger: CTGGTTTGAGCAACTGCTTCAAAACTTGTTGAAGTC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGGAACTACTCATCCCTaGGGAAACATCACCCATTTC +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISGTTHP*GNITHF
Trigger: GAAATGGGTGATGTTTCCTCAGGGATGAGTAGTTCC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGATCTACACGTTTCCGTaGCTTCCGAGGCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKIYTFP*LPRPGN
Trigger: GTTTCCAGGCCTCGGAAGTCACGGAAACGTGTAGAT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACGCCCATCAGGTCTCTaGTTTAAGGCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKRPSGL*FKASAR
Trigger: ACGAGCTGAAGCCTTAAAGCAGAGACCTGATGGGCG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCCCATTTCCCAAACACTaGGCGAATCGGCGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVPFPKH*ANRRLN
Trigger: ATTCAGACGCCGATTCGCCCAGTGTTTGGGAAATGG...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTCCCAGAGCTTGTCTGTaGTGGCACAAACCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFPRACL*WHKPAG
Trigger: TCCAGCCGGTTTGTGCCACCACAGACAAGCTCTGGG...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGCAGGGGAGCATACTaGCTGTGGAGATCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFSRGAY*LWRSQG
Trigger: CCCTTGAGATCTCCACAGCCAGTATGCTCCCCTGCT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCACAAAGTGGCATGGTaGACTCAATTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISHKVAW*TQFLPG
Trigger: TCCTGGCAGAAATTGAGTCCACCATGCCACTTTGTG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGGCTCTTCCTGTGTCTaGTATGGAAAACAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISGSSCV*YGKQAR
Trigger: TCTAGCCTGTTTTCCATACCAGACACAGGAAGAGCC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGGAAGTCCCATCCTTaGCGGCATACAGGGATCGTA +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKWKSHP*RHTGIV
Trigger: TACGATCCCTGTATGCCGCCAAGGATGGGACTTCCA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGTGGAAGTCCCATCCTTaGCGGCATACAGGGATCGTA +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKWKSHP*RHTGIV
Trigger: TACGATCCCTGTATGCCGCCAAGGATGGGACTTCCA...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGCTTGGTGGTGTCGGGTaGGTCGGTACCGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWLGGVG*VGTDGG
Trigger: CCCTCCGTCGGTACCGACTCACCCGACACCACCAAG...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTGCAACAATGGGACTTaGTACCGATGCTTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISCNNGT*YRCLLH
Trigger: ATGCAACAAGCATCGGTATCAAGTCCCATTGTTGCA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTATAACGACCACCACCTaGACTCCTTCTTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLITTTT*TPSSFM
Trigger: CATGAAGGAAGAAGGAGTTCAGGTGGTGGTCGTTAT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTACACTTGACTGGGTGTaGAAAAATGCCTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLTLDWV*KNASST
Trigger: GGTGCTTGAGGCATTTTTTCACACCCAGTCAAGTGT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCACACTTGACTGGGTGTaGAAAAATGCCTCAAGCACC +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVTLDWV*KNASST
Trigger: GGTGCTTGAGGCATTTTTTCACACCCAGTCAAGTGT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCATTTCCACAAGTTGCTaGTCAGCCTTGTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISISTSC*SALFRI
Trigger: TATGCGGAACAAGGCTGATCAGCAACTTGTGGAAAT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAAACATTAGGACTCCTTaGCAGGACGGCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKNIRTP*QDGLQQ
Trigger: TTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAACATTAGGACTCCTTaGCAGGACGGCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKNIRTP*QDGLQQ
Trigger: TTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAGAGTCCACTCTTCCTaGCTGATGAAGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISRVHSS*LMKINA
Trigger: AGCATTGATCTTCATCAGGCAGGAAGAGTGGACTCT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTCGCCCATCAGGTCTCTaGTTTAAGGCTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFRPSGL*FKASAR
Trigger: ACGAGCTGAAGCCTTAAAGCAGAGACCTGATGGGCG...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCTGGTTGCATAGTCATTaGATGTTTAACCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLWLHSH*MFNHEL
Trigger: CAGCTCATGGTTAAACATGCAATGACTATGCAACCA...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGGCCTGCAACAAGACTaGTATGTCACCTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFGLQQD*YVTFWV
Trigger: GACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGGCCTGCAACAAGACTaGTATGTCACCTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFGLQQD*YVTFWV
Trigger: GACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTGTATGGACTAGGCACTaGGCTATTTTGCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLVWTRH*AILLWH
Trigger: ATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATAC...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTAGCAGGGGAGCATACTaGCTGTGGAGATCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLSRGAY*LWRSQG
Trigger: CCCTTGAGATCTCCACAGCCAGTATGCTCCCCTGCT...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGGTCATGCCTGTGTTTTaGTGTTTCAGGTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKVMPVF*CFRSPF
Trigger: GAAGGGCGACCTGAAACACCAAAACACAGGCATGAC...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGGGCAAACGGCCTCATaGAGGCCAAGTATCGAACAA +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFGQTAS*RPSIEQ
Trigger: TTGTTCGATACTTGGCCTCCATGAGGCCGTTTGCCC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCTTCTTTGTCATTGTGTaGAGTTGGAGTAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLFFVIV*SWSKPE
Trigger: CTCTGGTTTACTCCAACTCCACACAATGACAAAGAA...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTCCGCATAGCAGGTTCTaGGTCTGTGCCCATAGCAAT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFPHSRF*VCAHSN
Trigger: ATTGCTATGGGCACAGACCCAGAACCTGCTATGCGG...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTGCTTCCCTGGAAACTaGGCTAAGCTAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLCFPGN*AKLKKA
Trigger: GGCTTTCTTTAGCTTAGCCCAGTTTCCAGGGAAGCA...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGCTTCCCTGGAAACTaGGCTAAGCTAAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVCFPGN*AKLKKA
Trigger: GGCTTTCTTTAGCTTAGCCCAGTTTCCAGGGAAGCA...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTCTGTTGATACCTGGTTaGGGCTATGGACAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFLLIPG*GYGQAV
Trigger: CACAGCTTGTCCATAGCCTCAACCAGGTATCAACAG...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCAGGACTGTCAGGTCTTaGTTTTTGTTCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVRTVRS*FLFPRR
Trigger: TCTTCTGGGGAACAAAAATCAAGACCTGACAGTCCT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATAACGACCACCACCTaGACTCCTTCTTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKITTTT*TPSSFM
Trigger: CATGAAGGAAGAAGGAGTTCAGGTGGTGGTCGTTAT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTTCACAGGTTTATATaGGGAATCCTCTTCGGACTT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLHRFI*GILFGL
Trigger: AAGTCCGAAGAGGATTCCTCATATAAACCTGTGAAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCATTTCCACAAGTTGCTaGTCAGCCTTGTTCCGCATA +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVISTSC*SALFRI
Trigger: TATGCGGAACAAGGCTGATCAGCAACTTGTGGAAAT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAAGGACTCGTCTTGTCTaGAACCCCTTACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKRTRLV*NPLQDL
Trigger: AAGATCCTGTAAGGGGTTTCAGACAAGACGAGTCCT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTCACTGTCGCTTaGCTCATTTTCCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISFFTVA*LIFLTR
Trigger: CCTAGTAAGGAAAATGAGTCAAGCGACAGTGAAGAA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCCATCCACTGAACACTaGAGCCACTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFPSTEH*SHCWFS
Trigger: AGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATGG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTTCTGGGTCATCACTaGCAAGGTTATCTTTCAACT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLLGHH*QGYLST
Trigger: AGTTGAAAGATAACCTTGGCAGTGATGACCCAGAAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGCCGCTTTCTCACTCTaGTCTTTTTCATCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKAAFSL*SFSSLP
Trigger: AGGCAAGGATGAAAAAGAGCAGAGTGAGAAAGCGGC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTGAGTCCCCTGATTCATaGCTGTGTTTTCGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLESPDS*LCFRSS
Trigger: ACTAGAACGAAAACACAGGCATGAATCAGGGGACTC...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTCCAGTATCTCTGCATaGTGCAACCACATCGGTAAT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLSSISA*CNHIGN
Trigger: ATTACCGATGTGGTTGCAGCATGCAGAGATACTGGA...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACTTCCAGTCTCTATCTaGCTGCTGCATACGTGTATC +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLPVSI*LLHTCI
Trigger: GATACACGTATGCAGCAGGCAGATAGAGACTGGAAG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTACTTTCATTCATCTGTaGTGCCAACTCCGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLTFIHL*CQLRRV
Trigger: GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTGCCACTGTAGGAGCCTaGCATCCACTGAACACTGAA +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFATVGA*HPLNTE
Trigger: TTCAGTGTTCAGTGGATGGCAGGCTCCTACAGTGGC...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGTAGTAATGGGGACATaGGGCATATCCCCATTCATC +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFVVMGT*GISPFI
Trigger: GATGAATGGGGATATGCCCCATGTCCCCATTACTAC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCACCTGGTTGAGGCTATaGACAAGCTGTGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVTWLRL*TSCETK
Trigger: TTTGGTTTCACAGCTTGTCCATAGCCTCAACCAGGT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGGTATGTCACCTTCTaGGTCATCACTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKWYVTF*VITAKV
Trigger: AACCTTGGCAGTGATGACCCAGAAGGTGACATACCA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTAACCACCTGCAACAATaGGACTTGATACCGATGCTT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLNHLQQ*DLIPML
Trigger: AAGCATCGGTATCAAGTCCCATTGTTGCAGGTGGTT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAGGCACTTGATTTGCTaGAAGGAATGCTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISRHLIC*KECCLF
Trigger: GAACAAACAGCATTCCTTCCAGCAAATCAAGTGCCT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTACCCCCAGCCTCCTGTaGGTAAGAATCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFTPSLL*VRILFS
Trigger: AGAAAACAAGATTCTTACCCACAGGAGGCTGGGGGT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTCATGCCTGTGTTTTaGTGTTTCAGGTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFVMPVF*CFRSPF
Trigger: GAAGGGCGACCTGAAACACCAAAACACAGGCATGAC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCATGGAGAGGAAGTTTTaGGCTGTTCGCATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVMERKF*AVRIAV
Trigger: AACAGCTATGCGAACAGCCCAAAACTTCCTCTCCAT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCTTGCTAGAATACTaGGGTCTACAGCAACAACCT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFALLEY*GLQQQP
Trigger: AGGTTGTTGCTGTAGACCCCAGTATTCTAGCAAGGC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCTTTAGTGGTAAGGTATaGTTGCATAGTCATTGCATG +
Preference number: 4 (lower is better)
Translates to: FNSVYPRHQFAAITALSLFSGKV*LHSHCM
Trigger: CATGCAATGACTATGCAACCATACCTTACCACTAAA...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCGGTTTCCACGGATCATaGAGTAAAGGTGTGAACACA +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVGFHGS*SKGVNT
Trigger: TGTGTTCACACCTTTACTCCATGATCCGTGGAAACC...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAAGGCTCGTCTGTGTTaGCGGTTTCCACGGATCATG +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDKARLC*RFPRIM
Trigger: CATGATCCGTGGAAACCGCCAACACAGACGAGCCTT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGTGACTTCCGAGGCCTaGAAACTTCTTCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFVTSEA*KLLLHC
Trigger: ACAGTGAAGAAGAAGTTTCCAGGCCTCGGAAGTCAC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCTATGGACAAGCTGTaGAACCAAATTGTCATCCCT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFAMDKL*NQIVIP
Trigger: AGGGATGACAATTTGGTTTCACAGCTTGTCCATAGC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACTCTATGTGATCTGTTaGTACCTGGTTGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLYVIC*YLVEAM
Trigger: CATAGCCTCAACCAGGTATCAACAGATCACATAGAG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTCTTTCAACTCTATGTaGTCTGTTGATACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISSFNSM*SVDTWL
Trigger: CAACCAGGTATCAACAGATCACATAGAGTTGAAAGA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGCTGGAGGGGCTATGTaGGATAGTGGTTTGTTGATA +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFAGGAM*DSGLLI
Trigger: TATCAACAAACCACTATCTCACATAGCCCCTCCAGC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAGCTGGAGGGGCTATGTaGGATAGTGGTTTGTTGATA +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSAGGAM*DSGLLI
Trigger: TATCAACAAACCACTATCTCACATAGCCCCTCCAGC...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGCATGATGATTAGCTaGATTGCCAGACAACGGACC +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFSMMIS*IARQRT
Trigger: GGTCCGTTGTCTGGCAATTCAGCTAATCATCATGCT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTAGCATTCCTCATTGTTaGAGAATCTCCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLSIPHC*RISIVT
Trigger: AGTGACGATGGAGATTCTTCAACAATGAGGAATGCT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTGCTGGTCCATGTCTaGAGACCTTACACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFLLVHV*RPYTRK
Trigger: CTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTATAGGTCCCTGTTGTaGTATCTGTTGTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISYRSLL*YLLLIL
Trigger: CAGAATCAACAACAGATATCACAACAGGGACCTATA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCATCTTGAACTTCTTTTaGGAAGCGCTCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISILNFF*EALPFN
Trigger: ATTGAAAGGGAGCGCTTCTCAAAAGAAGTTCAAGAT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCCAACAATATCTTCCTaGAGAACAGAAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLPTISS*RTETGA
Trigger: TGCACCTGTTTCTGTTCTTCAGGAAGATATTGTTGG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTTCCATGTCAGAATCTaGCGGACTTCGGTTTCGATA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFFHVRI*RTSVSI
Trigger: TATCGAAACCGAAGTCCGTCAGATTCTGACATGGAA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCCAAGTTCATTAAGCTaGTGTTTTCCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISPSSLS*CFPKSS
Trigger: ACTGCTCTTAGGAAAACATCAGCTTAATGAACTTGG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTGCCCTCTTCATCATTaGCTCTGCGAATCATTTTTA +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISCPLHH*LCESFL
Trigger: TAAAAATGATTCGCAGAGTCAATGATGAAGAGGGCA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGGAACTACTCATCCCTaGGGAAACATCACCCATTTC +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFGTTHP*GNITHF
Trigger: GAAATGGGTGATGTTTCCTCAGGGATGAGTAGTTCC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATCATGGAGTAAAGGTGTaGACACAAAGCGCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHHGVKV*TQSARG
Trigger: TCCTCTAGCGCTTTGTGTTCACACCTTTACTCCATG...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAGCATTTGTGCTAGCTaGAACCTCCCCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSICAS*NLPFFF
Trigger: GAAGAAGAAGGGGAGGTTTCAGCTAGCACAAATGCT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTCCATCCACTGAACACTaGAGCCACTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLPSTEH*SHCWFS
Trigger: AGAAAACCAGCAGTGGCTTCAGTGTTCAGTGGATGG...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTCTTCTGCTATTCGTaGATTAAAGAGAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLFCYS*IKEKAL
Trigger: AAGAGCCTTCTCTTTAATGCACGAATAGCAGAAGAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGGCACTGGGCTATTTTaGTGTGGCATAAATCTGTTC +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFGTGLF*CGINLF
Trigger: GAACAGATTTATGCCACAGCAAAATAGCCCAGTGCC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACATATGGCATGTATCCTaGAGGGCTTTGTGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDIWHVS*RALWGV
Trigger: TACGCCCCACAAAGCCCTGCAGGATACATGCCATAT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGAGTCCCCTGATTCATaGCTGTGTTTTCGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFESPDS*LCFRSS
Trigger: ACTAGAACGAAAACACAGGCATGAATCAGGGGACTC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACTCAACGCACCAGACCTaGCCCCCAACAAATAACTTG +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDSTHQT*PPTNNL
Trigger: CAAGTTATTTGTTGGGGGGCAGGTCTGGTGCGTTGA...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACGGTTTTCAGCTCGATaGATAATTTGGCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKRFSAR*IIWPVV
Trigger: GACAACTGGCCAAATTATGCATCGAGCTGAAAACCG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTGTTCGAACAGCAATTaGATTTTCACCAAGAACTCG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISCSNSN*IFTKNS
Trigger: CGAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTCCAGTATCTCTGCATaGTGCAACCACATCGGTAAT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFSSISA*CNHIGN
Trigger: ATTACCGATGTGGTTGCAGCATGCAGAGATACTGGA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAGAACAAAGTGGTTATaGAAGCTACCAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISRTKWL*KLPIFQ
Trigger: CTGGAAGATTGGTAGCTTGCATAACCACTTTGTTCT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAAAGTTTCACTTGGATaGTCCATCAGTGGTACAACT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISKVSLG*SISGTT
Trigger: AGTTGTACCACTGATGGAGCATCCAAGTGAAACTTT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAGATCAAAATCAAAATaGCGACATAGTGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISRSKSK*RHSAPT
Trigger: CGTTGGAGCACTATGTCGGCATTTTGATTTTGATCT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGCAGTCTCTATCTGCCTaGTGCATACGTGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKQSLSA*CIRVSS
Trigger: AGAAGATACACGTATGCAGCAGGCAGATAGAGACTG...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACTTCCAGTCTCTATCTaGCTGCTGCATACGTGTATC +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSLPVSI*LLHTCI
Trigger: GATACACGTATGCAGCAGGCAGATAGAGACTGGAAG...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAGTCACGTCTGTTTTTaGTGTGTCATCAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISSHVCF*CVIKEV
Trigger: AACCTCTTTGATGACACAGCAAAAACAGACGTGACT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCCACTGCTGGTTTTCTaGACTACTCTTGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLPLLVF*TTLAIC
Trigger: ACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATCCTTCTTTTGTTCCTaGATCCCAGGTTCCACTTAC +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKSFFCS*IPGSTY
Trigger: GTAAGTGGAACCTGGGATGCAGGAACAAAAGAAGGA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGAATCTGTTTCTGCTaGACAACAGCGAAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFRICFC*TTAKGA
Trigger: AGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTGGGCTATTTTGCTGTaGCATAAATCTGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLWAILL*HKSVPR
Trigger: TCTGGGAACAGATTTATGCCACAGCAAAATAGCCCA...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACGCTTTGTGGGGCGTATaGACTAGGCACTGGGCTATT +
Preference number: 4 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDALWGV*TRHWAI
Trigger: AATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGC...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACCGTCTCCTGAGAAGCTaGTCTATTACCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDRLLRS*SITSCS
Trigger: GCTACAGGAGGTAATAGACCAGCTTCTCAGGAGACG...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCCTCAGGATGGTTTTCTaGTGTAGATTTAAGACTTCC +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISLRMVF*CRFKTS
Trigger: GGAAGTCTTAAATCTACACCAGAAAACCATCCTGAG...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTATCACCCTTCTGTTTTaGGGTTTCAGGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFITLLF*GFRMPI
Trigger: GATGGGCATCCTGAAACCCCAAAACAGAAGGGTGAT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCATCACCCTTCTGTTTTaGGGTTTCAGGATGCCCATC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFITLLF*GFRMPI
Trigger: GATGGGCATCCTGAAACCCCAAAACAGAAGGGTGAT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGGATCTCAATGTTTCTaGTCTTCGAACCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKGSQCF*SSNPRL
Trigger: CAGTCTAGGGTTCGAAGACCAGAAACATTGAGATCC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGCACACGTTCACAAAGTaGCATGGTGGACTCAATTTC +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKHTFTK*HGGLNF
Trigger: GAAATTGAGTCCACCATGCCACTTTGTGAACGTGTG...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAGCCTTGCTAGAATACTaGGGTCTACAGCAACAACCT +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSALLEY*GLQQQP
Trigger: AGGTTGTTGCTGTAGACCCCAGTATTCTAGCAAGGC...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTACATTTAGGGCAAAGTaGCGTACACTTGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFTFRAK*RTLDWV
Trigger: CACCCAGTCAAGTGTACGCCACTTTGCCCTAAATGT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTGACTTCCGAGGCCTaGAAACTTCTTCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFVTSEA*KLLLHC
Trigger: ACAGTGAAGAAGAAGTTTCCAGGCCTCGGAAGTCAC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTGCAACAATGGGACTTaGTACCGATGCTTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFCNNGT*YRCLLH
Trigger: ATGCAACAAGCATCGGTATCAAGTCCCATTGTTGCA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGTAATGGGTGTTTTTaGAGTCTGTCCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFSNGCF*SLSWVL
Trigger: CAGTACCCAGGACAGACTTCAAAAACACCCATTACT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATTGCTGCGACAAACATTaGGCAGCATTTAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANCCDKH*AAFSGR
Trigger: CCGCCCACTAAATGCTGCTCAATGTTTGTCGCAGCA...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTGTAAAACAGGCACTTaGTTTGCTGGAAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFCKTGT*FAGRNA
Trigger: AGCATTCCTTCCAGCAAATCAAGTGCCTGTTTTACA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGTAAAACAGGCACTTaGTTTGCTGGAAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKCKTGT*FAGRNA
Trigger: AGCATTCCTTCCAGCAAATCAAGTGCCTGTTTTACA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCATCTTGAACTTCTTTTaGGAAGCGCTCCCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVILNFF*EALPFN
Trigger: ATTGAAAGGGAGCGCTTCTCAAAAGAAGTTCAAGAT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGGACTGTCAGGTCTTaGTTTTTGTTCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFRTVRS*FLFPRR
Trigger: TCTTCTGGGGAACAAAAATCAAGACCTGACAGTCCT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACCTAAGAGCAGTTCCTaGGGAATTTCATCATCATCA +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKPKSSS*GISSSS
Trigger: TGATGATGATGAAATTCCTCAGGAACTGCTCTTAGG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCAAAGTGGAAAGCTTTaGCCCATCCTGAATATTCTT +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLQSGKL*PILNIL
Trigger: AAGAATATTCAGGATGGGTCAAAGCTTTCCACTTTG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCCCATAGATGAAACCTaGAGAATTGTTGTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLPIDET*RIVVSV
Trigger: TACAGACACAACAATTCTTCAGGTTTCATCTATGGG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCAAGTGTACCACACACTaGATAAGTTGTAAAACCAGT +
Preference number: 4 (lower is better)
Translates to: SAAQQRRELPQKCLPNISKCTTH*ISCKTS
Trigger: ACTGGTTTTACAACTTATTCAGTGTGTGGTACACTT...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTCCATCAATCGTCCATaGACACCTCGTTGCATATCA +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSINRP*TPRCIS
Trigger: TGATATGCAACGAGGTGTTCATGGACGATTGATGGA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTAGGGATCGTAAAGTCTaGACAACTTTATTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLRDRKV*TTLLVS
Trigger: GCTGACTAATAAAGTTGTTCAGACTTTACGATCCCT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCTTCCGTCTCCTCAGTaGGGGGAACATGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFLPSPQ*GEHVEP
Trigger: CGGCTCTACATGTTCCCCGCACTGAGGAGACGGAAG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCAGTTCACCTCTTCTaGTATTCGTGCATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFAVHLF*YSCIKE
Trigger: CTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTTGATAATTGGAAGATaGAGGACTACTGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVLIIGR*RTTVHG
Trigger: TCCATGCACAGTAGTCCTGCATCTTCCAATTATCAA...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGATACCGATGCTTGTTaGATCTGTGGATGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFDTDAC*ICGCVV
Trigger: CACAACACATCCACAGATGCAACAAGCATCGGTATC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGAAATCATATCCTCTTaGTGGTCCATGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFEIISS*WSMSED
Trigger: GTCTTCAGACATGGACCAGCAAGAGGATATGATTTC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGAGTCCACTCTTCCTaGCTGATGAAGATCAATGCT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFRVHSS*LMKINA
Trigger: AGCATTGATCTTCATCAGGCAGGAAGAGTGGACTCT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATCCCTCCTATTGTCATaGCTGTGTTTTGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKSLLLS*LCFGVS
Trigger: TGAAACACCAAAACACAGGCATGACAATAGGAGGGA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTAGAACAAAGTGGTTATaGAAGCTACCAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLRTKWL*KLPIFQ
Trigger: CTGGAAGATTGGTAGCTTGCATAACCACTTTGTTCT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACAGCTCACACAATGTTaGACTACAGTCATGCCATAT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKQLTQC*TTVMPY
Trigger: ATATGGCATGACTGTAGTGCAACATTGTGTGAGCTG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCAGCTCACACAATGTTaGACTACAGTCATGCCATAT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFQLTQC*TTVMPY
Trigger: ATATGGCATGACTGTAGTGCAACATTGTGTGAGCTG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCAGTCTCTATCTGCCTaGTGCATACGTGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFQSLSA*CIRVSS
Trigger: AGAAGATACACGTATGCAGCAGGCAGATAGAGACTG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCCACTGCTGGTTTTCTaGACTACTCTTGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFPLLVF*TTLAIC
Trigger: ACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCGTCCTTTACCATAGATaGTGTGTCATCAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVVLYHR*CVIKEV
Trigger: AACCTCTTTGATGACACAGCATCTATGGTAAAGGAC...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTACCTGGTTGAGGCTATaGACAAGCTGTGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFTWLRL*TSCETK
Trigger: TTTGGTTTCACAGCTTGTCCATAGCCTCAACCAGGT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTGGGCTATTTTGCTGTaGCATAAATCTGTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFWAILL*HKSVPR
Trigger: TCTGGGAACAGATTTATGCCACAGCAAAATAGCCCA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAGGCACTTGATTTGCTaGAAGGAATGCTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKRHLIC*KECCLF
Trigger: GAACAAACAGCATTCCTTCCAGCAAATCAAGTGCCT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCATCACTCTTTTGTTTTaGAGTCTCAGGCCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFITLLF*SLRPAF
Trigger: GAAAGCCGGCCTGAGACTCCAAAACAAAAGAGTGAT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAATCACTCTTTTGTTTTaGAGTCTCAGGCCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSITLLF*SLRPAF
Trigger: GAAAGCCGGCCTGAGACTCCAAAACAAAAGAGTGAT...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTTAAACTCCTCTTGCTaGTTGGTAATCTTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLLNSSC*LVILQV
Trigger: CACTTGCAAGATTACCAACCAGCAAGAGGAGTTTAA...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTATGGAGAGGAAGTTTTaGGCTGTTCGCATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFMERKF*AVRIAV
Trigger: AACAGCTATGCGAACAGCCCAAAACTTCCTCTCCAT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGTCATTGTGTGGAGTTaGAGTAAACCAGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKVIVWS*SKPEFL
Trigger: CAGAAACTCTGGTTTACTCCAACTCCACACAATGAC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCTCCACCAGATTACCTaGGGATCCCTTTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFLHQIT*GSLFLY
Trigger: ATACAAGAAAAGGGATCCCCAGGTAATCTGGTGGAG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282516.13
3UTR CAA 72 bp GAAGCCACTGCTGGTTTTCTGCACTACTCTTGCAATTaGTGGTCGATCTTTGTACTTTGGACAGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: EATAGFLHYSCN*WSIFVLWTANS
Trigger: GCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTCTCTATGTGATCTGTTaGTACCTGGTTGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLLYVIC*YLVEAM
Trigger: CATAGCCTCAACCAGGTATCAACAGATCACATAGAG...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGTCTTTCAACTCTATGTaGTCTGTTGATACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKSFNSM*SVDTWL
Trigger: CAACCAGGTATCAACAGATCACATAGAGTTGAAAGA...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTGTTGTGTAACTTaGAGGATGGGAATATGGCAT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKMCCVT*RMGIWH
Trigger: ATGCCATATTCCCATCCTTCAAGTTACACAACACAT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACTTGCTGGTCCATGTCTaGAGACCTTACACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDLLVHV*RPYTRK
Trigger: CTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAA...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGTAATGGGTGTTTTTaGAGTCTGTCCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDSNGCF*SLSWVL
Trigger: CAGTACCCAGGACAGACTTCAAAAACACCCATTACT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTGTGATATCTGTTGTTaGTTCTGTACCACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFCDICC*FCTTEV
Trigger: GACTTCTGTGGTACAGAATCAACAACAGATATCACA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTTTCCATGTCAGAATCTaGCGGACTTCGGTTTCGATA +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLFHVRI*RTSVSI
Trigger: TATCGAAACCGAAGTCCGTCAGATTCTGACATGGAA...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACCTAAGAGCAGTTCCTaGGGAATTTCATCATCATCA +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSPKSSS*GISSSS
Trigger: TGATGATGATGAAATTCCTCAGGAACTGCTCTTAGG...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAAGACAAGCATCCGCTaGTTTTGTAACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFKTSIR*FCNSLH
Trigger: ATGGAGAGAGTTACAAAATCAGCGGATGCTTGTCTT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAAAGACAAGCATCCGCTaGTTTTGTAACTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSKTSIR*FCNSLH
Trigger: ATGGAGAGAGTTACAAAATCAGCGGATGCTTGTCTT...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGCACTACTGTTTAACCTaGAGTTCCTTAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKHYCLT*SSLNSS
Trigger: AGAGGAGTTTAAGGAACTTCAGGTTAAACAGTAGTG...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGACTTCAACAAGTTTTaGAGCAGTTGCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFDFNKF*SSCSNQ
Trigger: CTGGTTTGAGCAACTGCTTCAAAACTTGTTGAAGTC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATTTAGAGTCAATGCAATaGCATTTAGGGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHLESMQ*HLGQSG
Trigger: GCCACTTTGCCCTAAATGTCATTGCATTGACTCTAA...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAGCAGTTCACCTCTTCTaGTATTCGTGCATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSAVHLF*YSCIKE
Trigger: CTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGC...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTTGATAATTGGAAGATaGAGGACTACTGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFLIIGR*RTTVHG
Trigger: TCCATGCACAGTAGTCCTGCATCTTCCAATTATCAA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCTCAATTTCAGCCAATaGATCCAATTCCACTTCATC +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFLNFSQ*IQFHFI
Trigger: GATGAAGTGGAATTGGATGCATTGGCTGAAATTGAG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATCCTTAAACTCCTCTTaGTGGTTGGTAATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKSLNSS*WLVILQ
Trigger: TTGCAAGATTACCAACCAGCAAGAGGAGTTTAAGGA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACCATATCCAGTATCTCTaGATGCTGCAACCACATCGG +
Preference number: 4 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDHIQYL*MLQPHR
Trigger: CCGATGTGGTTGCAGCATGCAGAGATACTGGATATG...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGGTTGCATAGTCATTaGATGTTTAACCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKWLHSH*MFNHEL
Trigger: CAGCTCATGGTTAAACATGCAATGACTATGCAACCA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTCTCTATCTGCCTGCTaGATACGTGTATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSLSAC*IRVSSS
Trigger: AGAAGAAGATACACGTATGCAGCAGGCAGATAGAGA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCTTCATACCAGCCACTaGTTTCATATGAATGAATCC +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFLHTSH*FHMNES
Trigger: GGATTCATTCATATGAAAGCAGTGGCTGGTATGAAG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGACTCCTTGAATGACTaGAGTAGGTTACTACCAGAA +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFDSLND*SRLLPE
Trigger: TTCTGGTAGTAACCTACTGCAGTCATTCAAGGAGTC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACTCCTTCTTTTGTTCCTaGATCCCAGGTTCCACTTAC +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDSFFCS*IPGSTY
Trigger: GTAAGTGGAACCTGGGATGCAGGAACAAAAGAAGGA...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTATCATATCCTCTTGCTaGTCCATGTCTGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFIISSC*SMSEDL
Trigger: AAGGTCTTCAGACATGGACCAGCAAGAGGATATGAT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTGGATCTCAATGTTTCTaGTCTTCGAACCCTAGACTG +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFGSQCF*SSNPRL
Trigger: CAGTCTAGGGTTCGAAGACCAGAAACATTGAGATCC...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAATGTACACAGCTTTTaGCATGTTAGGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKNVHSF*HVRGCH
Trigger: ATGACATCCCCTAACATGCCAAAAGCTGTGTACATT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTATTACTCTCTGCTTATaGGTAGAACATTTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFITLCL*VEHLAR
Trigger: ACGGGCTAAATGTTCTACCCATAAGCAGAGAGTAAT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTCAGACAAACACTTCATaGCTTTTGTTCGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFQTNTS*LLFEQQ
Trigger: TTGCTGTTCGAACAAAAGCCATGAAGTGTTTGTCTG...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATGTCATTGTGTGGAGTTaGAGTAAACCAGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHVIVWS*SKPEFL
Trigger: CAGAAACTCTGGTTTACTCCAACTCCACACAATGAC...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATCGATCTTTGTACTTTaGACAGCAAATAGCGATGAC +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKSIFVL*TANSDD
Trigger: GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTTACAAATTCATTAGCTaGAAGTCCCATCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLYKFIS*KSHPWR
Trigger: CCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
3UTR CAA 72 bp GCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTaGTTCCTGCATCCCAGGTTCCACTTACTCTTCATA +
Preference number: 4 (lower is better)
Translates to: APTKMFAQHFLL*FLHPRFHLLFI
Trigger: TATGAAGAGTAAGTGGAACCTGGGATGCAGGAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACGCTATGGACAAGCTGTaGAACCAAATTGTCATCCCT +
Preference number: 4 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDAMDKL*NQIVIP
Trigger: AGGGATGACAATTTGGTTTCACAGCTTGTCCATAGC...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTAGCATTCCTCATTGTTaGAGAATCTCCATCGTCACT +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFSIPHC*RISIVT
Trigger: AGTGACGATGGAGATTCTTCAACAATGAGGAATGCT...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGAACAAGGTAGAGACTaGGATTGTAGGATTAAAGGT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFEQGRD*DCRIKG
Trigger: ACCTTTAATCCTACAATCTCAGTCTCTACCTTGTTC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATTGTGATATCTGTTGTTaGTTCTGTACCACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHCDICC*FCTTEV
Trigger: GACTTCTGTGGTACAGAATCAACAACAGATATCACA...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTATAGGTCCCTGTTGTaGTATCTGTTGTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFYRSLL*YLLLIL
Trigger: CAGAATCAACAACAGATATCACAACAGGGACCTATA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGGCTTATCTTTATCTTaGACTTCTTTTGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFGLSLS*TSFEKR
Trigger: GCGCTTCTCAAAAGAAGTTCAAGATAAAGATAAGCC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTAAGTGTACCACACACTaGATAAGTTGTAAAACCAGT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFKCTTH*ISCKTS
Trigger: ACTGGTTTTACAACTTATTCAGTGTGTGGTACACTT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACGTTCTATAGATCCTTaGTCCATTTTGCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKRSIDP*SILLVT
Trigger: TGTTACAAGCAAAATGGATCAAGGATCTATAGAACG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTAGGTTATCAACAAGTTaGGTACAAGCTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFRLSTS*VQAFFT
Trigger: TGTGAAGAAAGCTTGTACTCAACTTGTTGATAACCT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGCACCATAGTATCTATTaGAACAAGCCCACACAAATT +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKHHSIY*NKPTQI
Trigger: AATTTGTGTGGGCTTGTTTCAATAGATACTATGGTG...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTATTAGACTTGGATGCTaGATAAAGGCAAATCCTAGA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFIRLGC*IKANPR
Trigger: TCTAGGATTTGCCTTTATTCAGCATCCAAGTCTAAT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTTTCTTCACTGTCGCTTaGCTCATTTTCCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFFFTVA*LIFLTR
Trigger: CCTAGTAAGGAAAATGAGTCAAGCGACAGTGAAGAA...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGGAGTAAAAATGAACTaGGAATCTGTTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFGVKMN*ESVSAA
Trigger: TGCAGCAGAAACAGATTCTCAGTTCATTTTTACTCC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTACTATACATATCAAATaGTTAAACACCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFTIHIK*LNTSLL
Trigger: CAGGAGGGAGGTGTTTAATCATTTGATATGTATAGT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATGCCGCTTTCTCACTCTaGTCTTTTTCATCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANAAFSL*SFSSLP
Trigger: AGGCAAGGATGAAAAAGAGCAGAGTGAGAAAGCGGC...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTGAAATCATATCCTCTTaGTGGTCCATGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLEIISS*WSMSED
Trigger: GTCTTCAGACATGGACCAGCAAGAGGATATGATTTC...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCTCAATTTCAGCCAATaGATCCAATTCCACTTCATC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFLNFSQ*IQFHFI
Trigger: GATGAAGTGGAATTGGATGCATTGGCTGAAATTGAG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTGCTCTCGTTTTGTTTaGATTCAGTTGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFCSRFV*IQLFCS
Trigger: AGAGCAGAACAACTGAATGCAAACAAAACGAGAGCA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCATAACTTGGAAATTCTaGCTTATTGTCAGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFITWKF*LIVRVC
Trigger: GCACACCCTGACAATAAGGCAGAATTTCCAAGTTAT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATAGATCAAAATCAAAATaGCGACATAGTGCTCCAACG +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHRSKSK*RHSAPT
Trigger: CGTTGGAGCACTATGTCGGCATTTTGATTTTGATCT...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTAGATTCTTCACTTCTTaGTCGAACATTAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFRFFTS*SNIRLG
Trigger: TCCAAGTCTAATGTTCGAGCAAGAAGTGAAGAATCT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAGATTCTTCACTTCTTaGTCGAACATTAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKRFFTS*SNIRLG
Trigger: TCCAAGTCTAATGTTCGAGCAAGAAGTGAAGAATCT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACTCTCTATCTGCCTGCTaGATACGTGTATCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDSLSAC*IRVSSS
Trigger: AGAAGAAGATACACGTATGCAGCAGGCAGATAGAGA...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATCTTCATACCAGCCACTaGTTTCATATGAATGAATCC +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHLHTSH*FHMNES
Trigger: GGATTCATTCATATGAAAGCAGTGGCTGGTATGAAG...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTCAATGACCCTGAAGTaGCTCCTCCTCTATCCTCCC +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFSMTLK*LLLYPP
Trigger: GGGAGGATAGAGGAGGAGGCACTTCAGGGTCATTGA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATTTCTGCACTACTCTTaGAATTTGTGGTCGATCTTT +
Preference number: 4 (lower is better)
Translates to: NELRICFCCTTAKGAPTKFLHYS*NLWSIF
Trigger: AAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGTTTCTGCACTACTCTTaGAATTTGTGGTCGATCTTT +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKFLHYS*NLWSIF
Trigger: AAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGGCCACTGTAGGAGCCTaGCATCCACTGAACACTGAA +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWATVGA*HPLNTE
Trigger: TTCAGTGTTCAGTGGATGGCAGGCTCCTACAGTGGC...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATGTAGTAATGGGGACATaGGGCATATCCCCATTCATC +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANVVMGT*GISPFI
Trigger: GATGAATGGGGATATGCCCCATGTCCCCATTACTAC...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAATGTACACAGCTTTTaGCATGTTAGGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFNVHSF*HVRGCH
Trigger: ATGACATCCCCTAACATGCCAAAAGCTGTGTACATT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTAAACTCCTCTTGCTaGTTGGTAATCTTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFLNSSC*LVILQV
Trigger: CACTTGCAAGATTACCAACCAGCAAGAGGAGTTTAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTGGGCAAACGGCCTCATaGAGGCCAAGTATCGAACAA +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFGQTAS*RPSIEQ
Trigger: TTGTTCGATACTTGGCCTCCATGAGGCCGTTTGCCC...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTTCTTTGTCATTGTGTaGAGTTGGAGTAAACCAGAG +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFFFVIV*SWSKPE
Trigger: CTCTGGTTTACTCCAACTCCACACAATGACAAAGAA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTGTTTAACCATGAGCTaGGGTCTTATTTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFCLTMS*GLILLN
Trigger: ATTCAGCAAAATAAGACCCCAGCTCATGGTTAAACA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTAAGGCTCGTCTGTGTTaGCGGTTTCCACGGATCATG +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFKARLC*RFPRIM
Trigger: CATGATCCGTGGAAACCGCCAACACAGACGAGCCTT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGTACTCTTGCAATTTGTaGTCGATCTTTGTACTTTGG +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKYSCNL*SIFVLW
Trigger: CCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTATGTGTTGTGTAACTTaGAGGATGGGAATATGGCAT +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLMCCVT*RMGIWH
Trigger: ATGCCATATTCCCATCCTTCAAGTTACACAACACAT...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGGTAGAACCCGTCTCCTaGGAAGCTGGTCTATTACCT +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWVEPVS*EAGLLP
Trigger: AGGTAATAGACCAGCTTCTCAGGAGACGGGTTCTAC...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTTCATTTCACTCTTTaGAAGCTCAGGATCAGACTT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFFHFTL*KLRIRL
Trigger: AAGTCTGATCCTGAGCTTTCAAAGAGTGAAATGAAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCCAAGTTCATTAAGCTaGTGTTTTCCTAAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFPSSLS*CFPKSS
Trigger: ACTGCTCTTAGGAAAACATCAGCTTAATGAACTTGG...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATCACAGTTTTGTCAGTTaGAAGCTTATCCATTATACC +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHHSFVS*KLIHYT
Trigger: GGTATAATGGATAAGCTTTCAACTGACAAAACTGTG...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCAAAGTGGAAAGCTTTaGCCCATCCTGAATATTCTT +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFQSGKL*PILNIL
Trigger: AAGAATATTCAGGATGGGTCAAAGCTTTCCACTTTG...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCGTTCTATAGATCCTTaGTCCATTTTGCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFRSIDP*SILLVT
Trigger: TGTTACAAGCAAAATGGATCAAGGATCTATAGAACG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR TCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTTGCCCTCTTCATCATTaGCTCTGCGAATCATTTTTA +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLCPLHH*LCESFL
Trigger: TAAAAATGATTCGCAGAGTCAATGATGAAGAGGGCA...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAAGGTTATCAACAAGTTaGGTACAAGCTTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSRLSTS*VQAFFT
Trigger: TGTGAAGAAAGCTTGTACTCAACTTGTTGATAACCT...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATATTAGACTTGGATGCTaGATAAAGGCAAATCCTAGA +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHIRLGC*IKANPR
Trigger: TCTAGGATTTGCCTTTATTCAGCATCCAAGTCTAAT...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGTTACTACCAGAAACTaGGAGTGTAATGTCTATATG +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFVTTRN*ECNVYM
Trigger: CATATAGACATTACACTCTCAGTTTCTGGTAGTAAC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTAGGGATCGTAAAGTCTaGACAACTTTATTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFRDRKV*TTLLVS
Trigger: GCTGACTAATAAAGTTGTTCAGACTTTACGATCCCT...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGATATGGCATGTATCCTaGAGGGCTTTGTGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWIWHVS*RALWGV
Trigger: TACGCCCCACAAAGCCCTGCAGGATACATGCCATAT...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAATTATATCATACATTaGCGCTTTCTCACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFNYIIH*RFLTLL
Trigger: GAGCAGAGTGAGAAAGCGGCAATGTATGATATAATT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATAATTATATCATACATTaGCGCTTTCTCACTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHNYIIH*RFLTLL
Trigger: GAGCAGAGTGAGAAAGCGGCAATGTATGATATAATT...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTTGCTCTCGTTTTGTTTaGATTCAGTTGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLCSRFV*IQLFCS
Trigger: AGAGCAGAACAACTGAATGCAAACAAAACGAGAGCA...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACTCCCTCCTATTGTCATaGCTGTGTTTTGGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDSLLLS*LCFGVS
Trigger: TGAAACACCAAAACACAGGCATGACAATAGGAGGGA...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGCTTATTGTCAGGGTGTaGTTTATTAGTGTCTACTTT +
Preference number: 4 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKLIVRV*FISVYF
Trigger: AAAGTAGACACTAATAAAGCACACCCTGACAATAAG...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTATAACTTGGAAATTCTaGCTTATTGTCAGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLITWKF*LIVRVC
Trigger: GCACACCCTGACAATAAGGCAGAATTTCCAAGTTAT...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTTCCTTAAACTCCTCTTaGTGGTTGGTAATCTTGCAA +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFSLNSS*WLVILQ
Trigger: TTGCAAGATTACCAACCAGCAAGAGGAGTTTAAGGA...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACTGTTCGAACAGCAATTaGATTTTCACCAAGAACTCG +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDCSNSN*IFTKNS
Trigger: CGAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACA...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGTGGTAAGGTATGGTTaGATAGTCATTGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFVVRYG*IVIACL
Trigger: TAAACATGCAATGACTATGCAACCATACCTTACCAC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAAAGTTTCACTTGGATaGTCCATCAGTGGTACAACT +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDKVSLG*SISGTT
Trigger: AGTTGTACCACTGATGGAGCATCCAAGTGAAACTTT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCCATTTCCCAAACACTaGGCGAATCGGCGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFPFPKH*ANRRLN
Trigger: ATTCAGACGCCGATTCGCCCAGTGTTTGGGAAATGG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTCAGGACTACTGTGCATaGAATTCTGAGAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFQDYCA*NSEKVY
Trigger: ATAAACTTTCTCAGAATTCCATGCACAGTAGTCCTG...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTGGTTTGTTGATAATTaGAAGATGCAGGACTACTGT +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFWFVDN*KMQDYC
Trigger: ACAGTAGTCCTGCATCTTCCAATTATCAACAAACCA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTGGTTTGTTGATAATTaGAAGATGCAGGACTACTGT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFWFVDN*KMQDYC
Trigger: ACAGTAGTCCTGCATCTTCCAATTATCAACAAACCA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGCGTCTCCTGAGAAGCTaGTCTATTACCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWRLLRS*SITSCS
Trigger: GCTACAGGAGGTAATAGACCAGCTTCTCAGGAGACG...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTATTACTCTCTGCTTATaGGTAGAACATTTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFITLCL*VEHLAR
Trigger: ACGGGCTAAATGTTCTACCCATAAGCAGAGAGTAAT...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTCAGACAAACACTTCATaGCTTTTGTTCGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLQTNTS*LLFEQQ
Trigger: TTGCTGTTCGAACAAAAGCCATGAAGTGTTTGTCTG...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTTAGTGGTAAGGTATaGTTGCATAGTCATTGCATG +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFFSGKV*LHSHCM
Trigger: CATGCAATGACTATGCAACCATACCTTACCACTAAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTTCGATCTTTGTACTTTaGACAGCAAATAGCGATGAC +
Preference number: 4 (lower is better)
Translates to: MTSTLSFICAANSVESEFSIFVL*TANSDD
Trigger: GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGA...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATCCAACAATATCTTCCTaGAGAACAGAAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANPTISS*RTETGA
Trigger: TGCACCTGTTTCTGTTCTTCAGGAAGATATTGTTGG...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGGCTTATTGACTGTTaGAAGAAGGTCTTGAACAAA +
Preference number: 4 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDRLIDC*KKVLNK
Trigger: TTTGTTCAAGACCTTCTTTCAACAGTCAATAAGCCT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATCTTCACAGGTTTATATaGGGAATCCTCTTCGGACTT +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANLHRFI*GILFGL
Trigger: AAGTCCGAAGAGGATTCCTCATATAAACCTGTGAAG...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGCATGGAGTAAAGGTGTaGACACAAAGCGCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWHGVKV*TQSARG
Trigger: TCCTCTAGCGCTTTGTGTTCACACCTTTACTCCATG...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCTTATTGTCAGGGTGTaGTTTATTAGTGTCTACTTT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFLIVRV*FISVYF
Trigger: AAAGTAGACACTAATAAAGCACACCCTGACAATAAG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCATATCCAGTATCTCTaGATGCTGCAACCACATCGG +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFHIQYL*MLQPHR
Trigger: CCGATGTGGTTGCAGCATGCAGAGATACTGGATATG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTGTGGTAAGGTATGGTTaGATAGTCATTGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: LSFICAANSVESEFRFDLVVRYG*IVIACL
Trigger: TAAACATGCAATGACTATGCAACCATACCTTACCAC...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR GCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTCCCACAAAAATGTTTaGCCAACATTTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSHKNV*PTFPSF
Trigger: AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR GCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCATCCCACAAAAATGTTTaGCCAACATTTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSSHKNV*PTFPSF
Trigger: AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGA...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTCATCCTGAATTTCTaGAATGGTGTTGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFFILNF*NGVAYK
Trigger: TTTATAGGCAACACCATTCCAGAAATTCAGGATGAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CCA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCATTCATCCTGAATTTCTaGAATGGTGTTGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSFILNF*NGVAYK
Trigger: TTTATAGGCAACACCATTCCAGAAATTCAGGATGAA...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTGGTATGTCACCTTCTaGGTCATCACTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFWYVTF*VITAKV
Trigger: AACCTTGGCAGTGATGACCCAGAAGGTGACATACCA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTGGAGCATACTGGCTGTaGAGATCTCAAGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFGAYWL*RSQGKR
Trigger: TCTTTTCCCTTGAGATCTCCACAGCCAGTATGCTCC...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGACCCCCAGCCTCCTGTaGGTAAGAATCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWTPSLL*VRILFS
Trigger: AGAAAACAAGATTCTTACCCACAGGAGGCTGGGGGT...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACCTCAGGATGGTTTTCTaGTGTAGATTTAAGACTTCC +
Preference number: 4 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDLRMVF*CRFKTS
Trigger: GGAAGTCTTAAATCTACACCAGAAAACCATCCTGAG...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCACAAAGTGGCATGGTaGACTCAATTTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFHKVAW*TQFLPG
Trigger: TCCTGGCAGAAATTGAGTCCACCATGCCACTTTGTG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTACATTTAGGGCAAAGTaGCGTACACTTGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFTFRAK*RTLDWV
Trigger: CACCCAGTCAAGTGTACGCCACTTTGCCCTAAATGT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCAAAAAGGTATTTTGTaGCAATGTCATTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFQKGIL*QCHSSS
Trigger: TGAGGAAGAATGACATTGCCACAAAATACCTTTTTG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATCCCATAGATGAAACCTaGAGAATTGTTGTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANPIDET*RIVVSV
Trigger: TACAGACACAACAATTCTTCAGGTTTCATCTATGGG...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTCCATCAATCGTCCATaGACACCTCGTTGCATATCA +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWSINRP*TPRCIS
Trigger: TGATATGCAACGAGGTGTTCATGGACGATTGATGGA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCGGTTTTCAGCTCGATaGATAATTTGGCCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFRFSAR*IIWPVV
Trigger: GACAACTGGCCAAATTATGCATCGAGCTGAAAACCG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTAACCACCTGCAACAATaGGACTTGATACCGATGCTT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFNHLQQ*DLIPML
Trigger: AAGCATCGGTATCAAGTCCCATTGTTGCAGGTGGTT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCACACGTTCACAAAGTaGCATGGTGGACTCAATTTC +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFHTFTK*HGGLNF
Trigger: GAAATTGAGTCCACCATGCCACTTTGTGAACGTGTG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTGGTTTCCACGGATCATaGAGTAAAGGTGTGAACACA +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFGFHGS*SKGVNT
Trigger: TGTGTTCACACCTTTACTCCATGATCCGTGGAAACC...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTACAAATTCATTAGCTaGAAGTCCCATCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWYKFIS*KSHPWR
Trigger: CCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTATCCCCATTCATCCTaGATTTCTGGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWYPHSS*ISGMVL
Trigger: CAACACCATTCCAGAAATTCAGGATGAATGGGGATA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGGCCATTCAGGCTTATTaGCTGTTGAAAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWAIQAY*LLKEGL
Trigger: AAGACCTTCTTTCAACAGTCAATAAGCCTGAATGGC...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTTAGAGTCAATGCAATaGCATTTAGGGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWLESMQ*HLGQSG
Trigger: GCCACTTTGCCCTAAATGTCATTGCATTGACTCTAA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR GCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCTTCTGGGTCATCACTaGCAAGGTTATCTTTCAACT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFLLGHH*QGYLST
Trigger: AGTTGAAAGATAACCTTGGCAGTGATGACCCAGAAG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATCAGGACTACTGTGCATaGAATTCTGAGAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANQDYCA*NSEKVY
Trigger: ATAAACTTTCTCAGAATTCCATGCACAGTAGTCCTG...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTATCATATCCTCTTGCTaGTCCATGTCTGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFIISSC*SMSEDL
Trigger: AAGGTCTTCAGACATGGACCAGCAAGAGGATATGAT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTGAACAAGGTAGAGACTaGGATTGTAGGATTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFEQGRD*DCRIKG
Trigger: ACCTTTAATCCTACAATCTCAGTCTCTACCTTGTTC...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCACTACTGTTTAACCTaGAGTTCCTTAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFHYCLT*SSLNSS
Trigger: AGAGGAGTTTAAGGAACTTCAGGTTAAACAGTAGTG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCACAGTTTTGTCAGTTaGAAGCTTATCCATTATACC +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFHSFVS*KLIHYT
Trigger: GGTATAATGGATAAGCTTTCAACTGACAAAACTGTG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTAGGCTTATTGACTGTTaGAAGAAGGTCTTGAACAAA +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFRLIDC*KKVLNK
Trigger: TTTGTTCAAGACCTTCTTTCAACAGTCAATAAGCCT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCACCATAGTATCTATTaGAACAAGCCCACACAAATT +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFHHSIY*NKPTQI
Trigger: AATTTGTGTGGGCTTGTTTCAATAGATACTATGGTG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR TCA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTAGGCATTACTATTCCTaGGTGTCAACTATACATATC +
Preference number: 4 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFRHYYS*VSTIHI
Trigger: GATATGTATAGTTGACACTCAGGAATAGTAATGCCT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CCA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTACTCTTGCAATTTGTaGTCGATCTTTGTACTTTGG +
Preference number: 4 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWYSCNL*SIFVLW
Trigger: CCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS GCA 90 bp GCGGGCCCGGGAACCAATTCTCCTGTCGGCGGGGGCGTCCCTCCCTaGGGCTTGGTGGTGTCGGGTGAGTCGGTACCGACGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: AGPGTNSPVGGGVPP*GLVVSGESVPTEGG
Trigger: CCCTCCCTCCGTCGGTACCGACTCACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCCGCCGACAGGAGAATTGGTTCCCGGGCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000448238.2
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCACGCTGCGAAATACGTaGACTCCTCCTCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLTLRNT*TPPPPH
Trigger: GTGAGGCGGAGGAGGAGTCAACGTATTTCGCAGCGT...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS TCA 90 bp ACCATTAATGCTGGCCTTGACCCATTTCCCGTAGAACCCGTCTCCTaGGAAGCTGGTCTATTACCTCCTGTAGCACCCCCAGCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: TINAGLDPFPVEPVS*EAGLLPPVAPPASC
Trigger: ACAGGAGGCTGGGGGTGCTACAGGAGGTAATAGACCAGCTTCTCAGGAGACGGGTTCTACGGGAAATGGGTCAAGGCCAGCATTAATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS GCA 90 bp CCTGCAGGGCTTTGTGGGGCGTATGGACTAGGCACTGGGCTATTTTaGTGTGGCATAAATCTGTTCCCAGAGCTTGTCTGTGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: PAGLCGAYGLGTGLF*CGINLFPELVCGGT
Trigger: TGTGCCACCACAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 90 bp AGGGCTTTGTGGGGCGTATGGACTAGGCACTGGGCTATTTTGCTGTaGCATAAATCTGTTCCCAGAGCTTGTCTGTGGTGGCACAAACCG +
Preference number: 5 (lower is better)
Translates to: RALWGVWTRHWAILL*HKSVPRACLWWHKP
Trigger: CGGTTTGTGCCACCACAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACGTCCCTCCCTGCGGCTaGGTGGTGTCGGGTGAGTCG +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDVPPCG*VVSGES
Trigger: CGACTCACCCGACACCACCAAGCCGCAGGGAGGGAC...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS TCA 90 bp GGCTCGTCTGTGTTGGCGGTTTCCACGGATCATGGAGTAAAGGTGTaGACACAAAGCGCTAGAGGACTCGTCTTGTCTGAAACCCCTTAC +
Preference number: 5 (lower is better)
Translates to: GSSVLAVSTDHGVKV*TQSARGLVLSETPY
Trigger: GTAAGGGGTTTCAGACAAGACGAGTCCTCTAGCGCTTTGTGTTCACACCTTTACTCCATGATCCGTGGAAACCGCCAACACAGACGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
ENST00000652901.1
CDS CCA 90 bp TGGCATGTATCCTGCAGGGCTTTGTGGGGCGTATGGACTAGGCACTaGGCTATTTTGCTGTGGCATAAATCTGTTCCCAGAGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: WHVSCRALWGVWTRH*AILLWHKSVPRACL
Trigger: CAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGATACATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGATGGAGAGGAAGTTTaGGGCTGTTCGCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLDGEEV*GCSHSC
Trigger: ACAGCTATGCGAACAGCCCAAAACTTCCTCTCCATC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS GCA 90 bp ATGCTTTTCTCCCTGAAAACATTAGGACTCCTTGCCAGGACGGCCTaGAACAAGACTGGTATGTCACCTTCTGGGTCATCACTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: MLFSLKTLGLLARTA*NKTGMSPSGSSLPR
Trigger: CCTTGGCAGTGATGACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTTTTCAGGGAGAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS CCA 90 bp AGGATGGGAATATGGCATGTATCCTGCAGGGCTTTGTGGGGCGTATaGACTAGGCACTGGGCTATTTTGCTGTGGCATAAATCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: RMGIWHVSCRALWGV*TRHWAILLWHKSVP
Trigger: GGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGATACATGCCATATTCCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCCATCACTCTTTTGTTTaGGAGTCTCAGGCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLHHSFV*ESQAGF
Trigger: AAAGCCGGCCTGAGACTCCAAAACAAAAGAGTGATG...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGAGGACTGTCAGGTCTaGATTTTTGTTCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLEDCQV*IFVPQK
Trigger: CTTCTGGGGAACAAAAATCAAGACCTGACAGTCCTC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGCTAGAGGACTCGTCTaGTCTGAAACCCCTTACAGG +
Preference number: 5 (lower is better)
Translates to: SAAQQRRELPQKCLPNISARGLV*SETPYR
Trigger: CCTGTAAGGGGTTTCAGACAAGACGAGTCCTCTAGC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTACCCAAGGCACCAGTTaGCGGCCATCACGGCGCTTA +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFTQGTS*RPSRRL
Trigger: TAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGTATCCTGCAGGGCTTaGTGGGGCGTATGGACTAGG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFVSCRA*WGVWTR
Trigger: CCTAGTCCATACGCCCCACAAAGCCCTGCAGGATAC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATGTATCCTGCAGGGCTTaGTGGGGCGTATGGACTAGG +
Preference number: 5 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHVSCRA*WGVWTR
Trigger: CCTAGTCCATACGCCCCACAAAGCCCTGCAGGATAC...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTGTCATGCCTGTGTTTaGGTGTTTCAGGTCGCCCTT +
Preference number: 5 (lower is better)
Translates to: SAAQQRRELPQKCLPNISCHACV*VFQVAL
Trigger: AAGGGCGACCTGAAACACCAAAACACAGGCATGACA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGATGGAGAGGAAGTTTaGGGCTGTTCGCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: SAAQQRRELPQKCLPNISDGEEV*GCSHSC
Trigger: ACAGCTATGCGAACAGCCCAAAACTTCCTCTCCATC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS GCA 90 bp ATATCTGTTCTGCATGCTTTTCTCCCTGAAAACATTAGGACTCCTTaGCAGGACGGCCTGCAACAAGACTGGTATGTCACCTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ISVLHAFLPENIRTP*QDGLQQDWYVTFWV
Trigger: GACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTTTTCAGGGAGAAAAGCATGCAGAACAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS CCA 90 bp CCTGAAAACATTAGGACTCCTTGCCAGGACGGCCTGCAACAAGACTaGTATGTCACCTTCTGGGTCATCACTGCCAAGGTTATCTTTCAA +
Preference number: 5 (lower is better)
Translates to: PENIRTPCQDGLQQD*YVTFWVITAKVIFQ
Trigger: TTGAAAGATAACCTTGGCAGTGATGACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTGTCCCTCCCTGCGGCTaGGTGGTGTCGGGTGAGTCG +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFVPPCG*VVSGES
Trigger: CGACTCACCCGACACCACCAAGCCGCAGGGAGGGAC...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCATCACCCTTCTGTTTaGGGGTTTCAGGATGCCCAT +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLHHPSV*GFQDAH
Trigger: ATGGGCATCCTGAAACCCCAAAACAGAAGGGTGATG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCGTGTCTACTTTACTCTaGTTACCCTCTGTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLVSTLL*LPSVLL
Trigger: CAAAAGGACAGAGGGTAACAAGAGTAAAGTAGACAC...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGCTAGAGGACTCGTCTaGTCTGAAACCCCTTACAGG +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKARGLV*SETPYR
Trigger: CCTGTAAGGGGTTTCAGACAAGACGAGTCCTCTAGC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAAAGGCTCGTCTGTGTaGGCGGTTTCCACGGATCAT +
Preference number: 5 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKKGSSV*AVSTDH
Trigger: ATGATCCGTGGAAACCGCCAACACAGACGAGCCTTT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACACCCAAGGCACCAGTTaGCGGCCATCACGGCGCTTA +
Preference number: 5 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDTQGTS*RPSRRL
Trigger: TAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGT...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACCTGGAAGTCCCATCCTaGGCGGCATACAGGGATCGT +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDLEVPS*AAYRDR
Trigger: ACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAG...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATATCTGTTCCCAGAGCTaGTCTGTGGTGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHICSQS*SVVAQT
Trigger: GGTTTGTGCCACCACAGACAAGCTCTGGGAACAGAT...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGAATGCTGTTTGTTCTaGCTGCGACAAACATTGAGC +
Preference number: 5 (lower is better)
Translates to: SAAQQRRELPQKCLPNISECCLF*LRQTLS
Trigger: GCTCAATGTTTGTCGCAGCAAGAACAAACAGCATTC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCTTTCAGGCCTTGATTTaGTTGTTTCTGATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLFQALI*LFLICH
Trigger: ATGGCAGATCAGAAACAACAAAATCAAGGCCTGAAA...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCATCACTCTTTTGTTTaGGAGTCTCAGGCCGGCTTT +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLHHSFV*ESQAGF
Trigger: AAAGCCGGCCTGAGACTCCAAAACAAAAGAGTGATG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGCATCACCCTTCTGTTTaGGGGTTTCAGGATGCCCAT +
Preference number: 5 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKHHPSV*GFQDAH
Trigger: ATGGGCATCCTGAAACCCCAAAACAGAAGGGTGATG...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGTCATGCCTGTGTTTaGGTGTTTCAGGTCGCCCTT +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKCHACV*VFQVAL
Trigger: AAGGGCGACCTGAAACACCAAAACACAGGCATGACA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCAACACTTCATGGCTTTaGTTCGAACAGCAATTGCAT +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLNTSWL*FEQQLH
Trigger: ATGCAATTGCTGTTCGAACAAAAGCCATGAAGTGTT...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAAAGGCTCGTCTGTGTaGGCGGTTTCCACGGATCAT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFKGSSV*AVSTDH
Trigger: ATGATCCGTGGAAACCGCCAACACAGACGAGCCTTT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCACGGCGCTTAGCCTCCAGGAAGTCCAGTGTTaGTTTTGGATGAAAATGAAC +
Preference number: 5 (lower is better)
Translates to: FNSVYPRHQFAAITALSLQEVQC*FWMKMN
Trigger: GTTCATTTTCATCCAAAACAAACACTGGACTTCCTG...GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS TCA 90 bp ACTGCTGCTTCTCGGACACTAGTCGAATTATCCATCAATCGTCCATaGACACCTCGTTGCATATCAAGCCTTGCTAGAATACTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: TAASRTLVELSINRP*TPRCISSLARILGS
Trigger: AGACCCCAGTATTCTAGCAAGGCTTGATATGCAACGAGGTGTTCATGGACGATTGATGGATAATTCGACTAGTGTCCGAGAAGCAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTCTGTTGATACCTGGTaGAGGCTATGGACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFSVDTW*RLWTSC
Trigger: ACAGCTTGTCCATAGCCTCAACCAGGTATCAACAGA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACTGCAACAATGGGACTaGATACCGATGCTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLQQWD*IPMLVA
Trigger: TGCAACAAGCATCGGTATCAAGTCCCATTGTTGCAG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCAGCATTCCTCATTGTaGAAGAATCTCCATCGTCAC +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLQHSSL*KNLHRH
Trigger: GTGACGATGGAGATTCTTCAACAATGAGGAATGCTG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCAAGTCTGGGGTTGTTTaGCAGCAACTGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVKSGVV*QQLKCS
Trigger: AGAACACTTCAGTTGCTGCAAAACAACCCCAGACTT...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAAGATGGTCTTTCCCTaGAGTCCCCTGATTCATGCC +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFKMVFP*SPLIHA
Trigger: GGCATGAATCAGGGGACTCAAGGGAAAGACCATCTT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGAGGACTGTCAGGTCTaGATTTTTGTTCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFEDCQV*IFVPQK
Trigger: CTTCTGGGGAACAAAAATCAAGACCTGACAGTCCTC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTGGCCATTCAGGCTTATaGACTGTTGAAAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLGHSGL*TVERRS
Trigger: AGACCTTCTTTCAACAGTCAATAAGCCTGAATGGCC...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTTTCTGTTTCCAGAGTaGTGTCTCGAAACCACTGGG +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFFLFPE*CLETTG
Trigger: CCCAGTGGTTTCGAGACACAACTCTGGAAACAGAAA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGTCTATTTCCACAAGTaGCTGATCAGCCTTGTTCCG +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFVYFHK*LISLVP
Trigger: CGGAACAAGGCTGATCAGCAACTTGTGGAAATAGAC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS TCA 90 bp TTTCTACTAGAGGATCTCAATGTTTCTGGTCTTCGAACCCTAGACTaGTCCCCTCGATGTCGCTCTGATTCACCCCTGTCATCTGATTTT +
Preference number: 5 (lower is better)
Translates to: FLLEDLNVSGLRTLD*SPRCRSDSPLSSDF
Trigger: AAAATCAGATGACAGGGGTGAATCAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCAGAAACATTGAGATCCTCTAGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCCGAGAAGACAAATCGTaGCTTCTTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFREDKS*LLLPPP
Trigger: AGGAGGAGGAAGAAGAAGCAACGATTTGTCTTCTCG...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAGGCACTGGGCTATTTaGCTGTGGCATAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKRHWAI*LWHKSV
Trigger: AACAGATTTATGCCACAGCAAAATAGCCCAGTGCCT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCGATGTGTTGTGTAACTaGAAGGATGGGAATATGGCA +
Preference number: 5 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVDVLCN*KDGNMA
Trigger: TGCCATATTCCCATCCTTCAAGTTACACAACACATC...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGCATCTGTGGATGTGTaGTGTAACTTGAAGGATGGG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFASVDV*CNLKDG
Trigger: CCCATCCTTCAAGTTACACAACACATCCACAGATGC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATCTGCAACAATGGGACTaGATACCGATGCTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHLQQWD*IPMLVA
Trigger: TGCAACAAGCATCGGTATCAAGTCCCATTGTTGCAG...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTGGAAGGAATGCTGTTaGTTCTTGCTGCGACAAACA +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFWKECC*FLLRQT
Trigger: TGTTTGTCGCAGCAAGAACAAACAGCATTCCTTCCA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGTGCTCTCGTTTTGTTaGCATTCAGTTGTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFVLSFC*HSVVLL
Trigger: GAGCAGAACAACTGAATGCAAACAAAACGAGAGCAC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTTGGGGTTTCAGGCCTaGATTTTGTTGTTTCTGATC +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLLGFQA*ILLFLI
Trigger: GATCAGAAACAACAAAATCAAGGCCTGAAACCCCAA...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTAAGATGGTCTTTCCCTaGAGTCCCCTGATTCATGCC +
Preference number: 5 (lower is better)
Translates to: LSFICAANSVESEFRFDLKMVFP*SPLIHA
Trigger: GGCATGAATCAGGGGACTCAAGGGAAAGACCATCTT...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTGTGTCTACTTTACTCTaGTTACCCTCTGTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLVSTLL*LPSVLL
Trigger: CAAAAGGACAGAGGGTAACAAGAGTAAAGTAGACAC...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTTTCTGTTTCCAGAGTaGTGTCTCGAAACCACTGGG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFFLFPE*CLETTG
Trigger: CCCAGTGGTTTCGAGACACAACTCTGGAAACAGAAA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGTTGCATATCAAGCCTaGCTAGAATACTGGGGTCTA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKVAYQA*LEYWGL
Trigger: TAGACCCCAGTATTCTAGCAAGGCTTGATATGCAAC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCGAATTCACACCTTTATaGTCAGAGTCAGCTAGAGAT +
Preference number: 5 (lower is better)
Translates to: SAAQQRRELPQKCLPNISEFTPL*SESARD
Trigger: ATCTCTAGCTGACTCTGACAATAAAGGTGTGAATTC...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTCTATTTCCACAAGTaGCTGATCAGCCTTGTTCCG +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFVYFHK*LISLVP
Trigger: CGGAACAAGGCTGATCAGCAACTTGTGGAAATAGAC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTACCCTGGGACACATTaGCAAATTCGATTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVYPGTH*QIRLKE
Trigger: CTCCTTTAATCGAATTTGCAAATGTGTCCCAGGGTA...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACCGAGAAGACAAATCGTaGCTTCTTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDREDKS*LLLPPP
Trigger: AGGAGGAGGAAGAAGAAGCAACGATTTGTCTTCTCG...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGATGTGTTGTGTAACTaGAAGGATGGGAATATGGCA +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFDVLCN*KDGNMA
Trigger: TGCCATATTCCCATCCTTCAAGTTACACAACACATC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTATGCAGCATTCCTCATaGTTGAAGAATCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFMQHSS*LKNLHR
Trigger: ACGATGGAGATTCTTCAACAATGAGGAATGCTGCAT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGAATGCTGTTTGTTCTaGCTGCGACAAACATTGAGC +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFECCLF*LRQTLS
Trigger: GCTCAATGTTTGTCGCAGCAAGAACAAACAGCATTC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAAAACAGGCACTTGATTaGCTGGAAGGAATGCTGTTT +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKKQALD*LEGMLF
Trigger: AAACAGCATTCCTTCCAGCAAATCAAGTGCCTGTTT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAGTGCTCTCGTTTTGTTaGCATTCAGTTGTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSVLSFC*HSVVLL
Trigger: GAGCAGAACAACTGAATGCAAACAAAACGAGAGCAC...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTATTAGAATCTCCTaGTTTAACACGAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: SAAQQRRELPQKCLPNISFIRIS*FNTRTV
Trigger: GACAGTCCTCGTGTTAAACAAGGAGATTCTAATAAA...GGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTTTACCCTCTGTCCTTTaGTCATCTTTACTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLLPSVL*SSLLVG
Trigger: ACCAACTAGTAAAGATGACAAAAGGACAGAGGGTAA...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTGGAAATTCTGCCTTATaGTCAGGGTGTGCTTTATTA +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLGNSAL*SGCALL
Trigger: TAATAAAGCACACCCTGACAATAAGGCAGAATTTCC...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTGCTACGCTTGCGTTaGTTCATTTTCACACGTTCA +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFVLRLR*FIFTRS
Trigger: TGAACGTGTGAAAATGAACAAACGCAAGCGTAGCAC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAACTCCTCTTGCTGGTaGGTAATCTTGCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFNSSCW*VILQVK
Trigger: CTTCACTTGCAAGATTACCAACCAGCAAGAGGAGTT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGGCCATTCAGGCTTATaGACTGTTGAAAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFGHSGL*TVERRS
Trigger: AGACCTTCTTTCAACAGTCAATAAGCCTGAATGGCC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACTTGTCATTGCTTCTTaGTCATTGTGTGGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLVIAS*SLCGVG
Trigger: TCCAACTCCACACAATGACAAAGAAGCAATGACAAG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGGACTTCAACAAGTTTaGAAGCAGTTGCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKGLQQV*KQLLKP
Trigger: TGGTTTGAGCAACTGCTTCAAAACTTGTTGAAGTCC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ATAATGTCTGACTCTTTAATAGTGTCTACCCAAGGCACCAGTTTGCGGCCATCAACAGCTCACACAATGTaGCACTACAGTCATGCCATA +
Preference number: 5 (lower is better)
Translates to: IMSDSLIVSTQGTSLRPSTAHTM*HYSHAI
Trigger: TATGGCATGACTGTAGTGCAACATTGTGTGAGCTGT...TGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAGTCAGACATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATGTGTTGATTGCCTGTaGTACCTGGTAAGACATCTT +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKCVDCL*YLVRHL
Trigger: AAGATGTCTTACCAGGTACAACAGGCAATCAACACA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTCTTTTAGGCATGTGTaGATTGCCTGTTGTACCTGG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSFRHV*IACCTW
Trigger: CCAGGTACAACAGGCAATCAACACATGCCTAAAAGA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGGAAAACAGGCTAGATaGTCTGCTATATACAAGAGC +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFGKQAR*SAIYKS
Trigger: GCTCTTGTATATAGCAGACAATCTAGCCTGTTTTCC...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATACCCTGGGACACATTaGCAAATTCGATTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKYPGTH*QIRLKE
Trigger: CTCCTTTAATCGAATTTGCAAATGTGTCCCAGGGTA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCACTACTCTTGCAATTaGTGGTCGATCTTTGTACTT +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLHYSCN*WSIFVL
Trigger: AAGTACAAAGATCGACCACAAATTGCAAGAGTAGTG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGCTGGAAGTCCCATCCTaGGCGGCATACAGGGATCGT +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWLEVPS*AAYRDR
Trigger: ACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAG...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp GACATCCATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCCTCCCACAAAAATGTTaGCCCAACATTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: DIHDVNTFIHLCCQLRRVLPQKC*PNISFF
Trigger: AAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAG...GACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCATGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS GCA 90 bp AACCAAATTGTCATCCCTACAAGCCAAAAGGCAGTTCACCTCTTCTaGTATTCGTGCATTAAAGAGAAGGCTCTTTGTAGTTGTAGCAGG +
Preference number: 5 (lower is better)
Translates to: NQIVIPTSQKAVHLF*YSCIKEKALCSCSR
Trigger: CCTGCTACAACTACAAAGAGCCTTCTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGCCTTTTGGCTTGTAGGGATGACAATTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS-3UTR CAA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACGCATCTGTGGATGTGTaGTGTAACTTGAAGGATGGG +
Preference number: 5 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDASVDV*CNLKDG
Trigger: CCCATCCTTCAAGTTACACAACACATCCACAGATGC...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACCAGCATTCCTCATTGTaGAAGAATCTCCATCGTCAC +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDQHSSL*KNLHRH
Trigger: GTGACGATGGAGATTCTTCAACAATGAGGAATGCTG...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTGGGCGGTTTATATCTaGTGGAGTAATGGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFWAVYI*WSNGCF
Trigger: AAAACACCCATTACTCCACAAGATATAAACCGCCCA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTATGGTGCTCTCGTTTaGTTTGCATTCAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFYGALV*FAFSCS
Trigger: AGAACAACTGAATGCAAACAAAACGAGAGCACCATA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGGAAATTCTGCCTTATaGTCAGGGTGTGCTTTATTA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKGNSAL*SGCALL
Trigger: TAATAAAGCACACCCTGACAATAAGGCAGAATTTCC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAACCCCCAACAAATAACTaGGAAATTCTGCCTTATTGT +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKPPTNN*EILPYC
Trigger: ACAATAAGGCAGAATTTCCAAGTTATTTGTTGGGGG...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCCATCTTTATCCCTCTaGATTTTCGGAATGACAAAA +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLPSLSL*IFGMTK
Trigger: TTTTGTCATTCCGAAAATCAAGAGGGATAAAGATGG...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACGTGCTACGCTTGCGTTaGTTCATTTTCACACGTTCA +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDVLRLR*FIFTRS
Trigger: TGAACGTGTGAAAATGAACAAACGCAAGCGTAGCAC...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATTAACTGTGCTACGCTaGCGTTTGTTCATTTTCACA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLTVLR*RLFIFT
Trigger: TGTGAAAATGAACAAACGCAAGCGTAGCACAGTTAA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTAAGACTTTCACAGTTTaGTCAGTTGAAAGCTTATCC +
Preference number: 5 (lower is better)
Translates to: CCTTAKGAPTKMFAQHFLKTFTV*SVESLS
Trigger: GGATAAGCTTTCAACTGACAAAACTGTGAAAGTCTT...AAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTACAAAGTGGAAAGCTTaGACCCATCCTGAATATTCT +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFTKWKA*THPEYS
Trigger: AGAATATTCAGGATGGGTCAAAGCTTTCCACTTTGT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAGGGGATGTCATAATGTaGATAGTTGTAAGACAAGCA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKGDVIM*IVVRQA
Trigger: TGCTTGTCTTACAACTATCAACATTATGACATCCCC...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAACTCCTCTTGCTGGTaGGTAATCTTGCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDNSSCW*VILQVK
Trigger: CTTCACTTGCAAGATTACCAACCAGCAAGAGGAGTT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTCCTTAAACTCCTCTaGCTGGTTGGTAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFFLKLL*LVGNLA
Trigger: TGCAAGATTACCAACCAGCAAGAGGAGTTTAAGGAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTTTGTCTCAATTTCCTTaGCATGATGTGTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFLSQFP*HDVFLQ
Trigger: CTGAAGGAACACATCATGCAAAGGAAATTGAGACAA...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAGCTCGATGCATAATTaGGCCAGTTGTCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSSMHN*ASCLNF
Trigger: GAAATTGAGACAACTGGCCAAATTATGCATCGAGCT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAAACACTTCATGGCTTTaGTTCGAACAGCAATTGCAT +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKNTSWL*FEQQLH
Trigger: ATGCAATTGCTGTTCGAACAAAAGCCATGAAGTGTT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTATGCCCTCTTCATCATaGACTCTGCGAATCATTTTT +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFMPSSS*TLRIIF
Trigger: AAAAATGATTCGCAGAGTCAATGATGAAGAGGGCAT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTATTGCTTCTTTGTCATaGTGTGGAGTTGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFIASLS*CGVGVN
Trigger: GTTTACTCCAACTCCACACAATGACAAAGAAGCAAT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGGACTTCAACAAGTTTaGAAGCAGTTGCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFGLQQV*KQLLKP
Trigger: TGGTTTGAGCAACTGCTTCAAAACTTGTTGAAGTCC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACAGGGATCGTAAAGAGTGGTAAGGTATGGTaGCATAGTCATTGCATGTTT +
Preference number: 5 (lower is better)
Translates to: YKFISWKSHPWRHTGIVKSGKVW*HSHCMF
Trigger: AAACATGCAATGACTATGCAACCATACCTTACCACT...CTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAATTAAGTCTTCCTGTTTaGCAACTTTCTTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKLSLPV*QLSSSL
Trigger: GAGACTGGAAGAAAGTTGCAAAACAGGAAGACTTAA...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACTCTTTTAGGCATGTGTaGATTGCCTGTTGTACCTGG +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDSFRHV*IACCTW
Trigger: CCAGGTACAACAGGCAATCAACACATGCCTAAAAGA...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATACCTCTTCTGTGATTTaGGAATTAGCCATGTCACTC +
Preference number: 5 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHTSSVI*ELAMSL
Trigger: GAGTGACATGGCTAATTCCAAAATCACAGAAGAGGT...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAGTCTGAATTTCGTTTaGACCTTCTCAATGACCCTG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSLNFV*TFSMTL
Trigger: CAGGGTCATTGAGAAGGTCAAAACGAAATTCAGACT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCAACATTTCCTTCTTTaGTTCCTGCATCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: MTSTLSFICAANSVESEFQHFLL*FLHPRF
Trigger: GAACCTGGGATGCAGGAACAAAAGAAGGAAATGTTG...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGATCTGTTCCCAGAGCTaGTCTGTGGTGGCACAAACC +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWICSQS*SVVAQT
Trigger: GGTTTGTGCCACCACAGACAAGCTCTGGGAACAGAT...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTATGCAGCATTCCTCATaGTTGAAGAATCTCCATCGT +
Preference number: 5 (lower is better)
Translates to: LSFICAANSVESEFRFDLMQHSS*LKNLHR
Trigger: ACGATGGAGATTCTTCAACAATGAGGAATGCTGCAT...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACTGGAAGGAATGCTGTTaGTTCTTGCTGCGACAAACA +
Preference number: 5 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDWKECC*FLLRQT
Trigger: TGTTTGTCGCAGCAAGAACAAACAGCATTCCTTCCA...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTAAACAGGCACTTGATTaGCTGGAAGGAATGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFKQALD*LEGMLF
Trigger: AAACAGCATTCCTTCCAGCAAATCAAGTGCCTGTTT...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTAGGTGCATCATTACATaGTTTGATTTCTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFRCIIT*FDFFRL
Trigger: AAGCCTGAAGAAATCAAACAATGTAATGATGCACCT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATTATGGTGCTCTCGTTTaGTTTGCATTCAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHYGALV*FAFSCS
Trigger: AGAACAACTGAATGCAAACAAAACGAGAGCACCATA...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTTACCCTCTGTCCTTTaGTCATCTTTACTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFLPSVL*SSLLVG
Trigger: ACCAACTAGTAAAGATGACAAAAGGACAGAGGGTAA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCACAAAGTGGAAAGCTTaGACCCATCCTGAATATTCT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFTKWKA*THPEYS
Trigger: AGAATATTCAGGATGGGTCAAAGCTTTCCACTTTGT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTTTCCTTAAACTCCTCTaGCTGGTTGGTAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFFLKLL*LVGNLA
Trigger: TGCAAGATTACCAACCAGCAAGAGGAGTTTAAGGAA...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGCGTTCTATAGATCCTaGATCCATTTTGCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFAFYRS*IHFACN
Trigger: GTTACAAGCAAAATGGATCAAGGATCTATAGAACGC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTGTTCGAACAGCAATaGCATTTTCACCAAGAACTC +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFLFEQQ*HFHQEL
Trigger: GAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCATGCCCTCTTCATCATaGACTCTGCGAATCATTTTT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFMPSSS*TLRIIF
Trigger: AAAAATGATTCGCAGAGTCAATGATGAAGAGGGCAT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCGAATTCACACCTTTATaGTCAGAGTCAGCTAGAGAT +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFEFTPL*SESARD
Trigger: ATCTCTAGCTGACTCTGACAATAAAGGTGTGAATTC...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTAGTGGTAAGGTATGGTaGCATAGTCATTGCATGTTT +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFSGKVW*HSHCMF
Trigger: AAACATGCAATGACTATGCAACCATACCTTACCACT...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATGTTTACAGTCATGCCATATTaGATGATGAGCTTCATTAGA +
Preference number: 5 (lower is better)
Translates to: LRICFCCTTAKGAPTKMFTVMPY*MMSFIR
Trigger: TCTAATGAAGCTCATCATCAAATATGGCATGACTGT...AAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCAGTCCAGTGTTTGTTTaGGATGAAAATGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFSPVFV*DENELL
Trigger: CAGGAGTTCATTTTCATCCAAAACAAACACTGGACT...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AATGAACTGAGAATCTGTTTCTGCTGCACAACAGCGAAGGGAGCTCCCACAAAAATTTGTGGTCGATCTTaGTACTTTGGACAGCAAATA +
Preference number: 5 (lower is better)
Translates to: NELRICFCCTTAKGAPTKICGRS*YFGQQI
Trigger: TATTTGCTGTCCAAAGTACAAAGATCGACCACAAAT...TTTTGTGGGAGCTCCCTTCGCTGTTGTGCAGCAGAAACAGATTCTCAGTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp AAATTTGGCTGCATGTACAAATTCATTAGCTGGAAGTCCCATCCTTGGCGGCATTTTTCTGCACTACTCTaGCAATTTGTGGTCGATCTT +
Preference number: 5 (lower is better)
Translates to: KFGCMYKFISWKSHPWRHFSALL*QFVVDL
Trigger: AAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAA...ATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCCAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTCTCCCACAAAAATGTTaGCCCAACATTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFLPQKC*PNISFF
Trigger: AAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAG...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS TCA 90 bp AGCCAATGCATCCAATTCCACTTCATCATATATAGGTCCCTGTTGTaGTATCTGTTGTTGATTCTGTACCACAGAAGTCTGGGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: SQCIQFHFIIYRSLL*YLLLILYHRSLGLF
Trigger: AAACAACCCCAGACTTCTGTGGTACAGAATCAACAACAGATATCACAACAGGGACCTATATATGATGAAGTGGAATTGGATGCATTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS-3UTR CAA 90 bp ACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGTTCTTTGTTTGTTGTCATTaGGTTTTGTGTCAGACAGTC +
Preference number: 5 (lower is better)
Translates to: TAKGAPTKMFAQHFLLLFFVCCH*VLCQTV
Trigger: GACTGTCTGACACAAAACCAAATGACAACAAACAAA...GAACAAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTTTATTAGAATCTCCTaGTTTAACACGAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFFIRIS*FNTRTV
Trigger: GACAGTCCTCGTGTTAAACAAGGAGATTCTAATAAA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTTTAACTGTGCTACGCTaGCGTTTGTTCATTTTCACA +
Preference number: 5 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFLTVLR*RLFIFT
Trigger: TGTGAAAATGAACAAACGCAAGCGTAGCACAGTTAA...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTGGGGATGTCATAATGTaGATAGTTGTAAGACAAGCA +
Preference number: 5 (lower is better)
Translates to: MTSTLSFICAANSVESEFGDVIM*IVVRQA
Trigger: TGCTTGTCTTACAACTATCAACATTATGACATCCCC...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTCGTTTTGACCTTGCGTTCTATAGATCCTaGATCCATTTTGCTTGTAAC +
Preference number: 5 (lower is better)
Translates to: LSFICAANSVESEFRFDLAFYRS*IHFACN
Trigger: GTTACAAGCAAAATGGATCAAGGATCTATAGAACGC...AAGGTCAAAACGAAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTTTGTCTCAATTTCCTTaGCATGATGTGTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFLSQFP*HDVFLQ
Trigger: CTGAAGGAACACATCATGCAAAGGAAATTGAGACAA...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATGTTGCATATCAAGCCTaGCTAGAATACTGGGGTCTA +
Preference number: 5 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANVAYQA*LEYWGL
Trigger: TAGACCCCAGTATTCTAGCAAGGCTTGATATGCAAC...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACATTGCTTCTTTGTCATaGTGTGGAGTTGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDIASLS*CGVGVN
Trigger: GTTTACTCCAACTCCACACAATGACAAAGAAGCAAT...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACCAAGAAAAGTTTCACTaGGATGCTCCATCAGTGGTA +
Preference number: 5 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDQEKFH*DAPSVV
Trigger: TACCACTGATGGAGCATCCAAGTGAAACTTTTCTTG...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTGAAGTGCTGGTTTGTTaGTTAGAAGTGAAGTGTTAT +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFEVLVC*LEVKCY
Trigger: ATAACACTTCACTTCTAACAAACAAACCAGCACTTC...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000652901.1
CDS-3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTAGTCCAGTGTTTGTTTaGGATGAAAATGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFSPVFV*DENELL
Trigger: CAGGAGTTCATTTTCATCCAAAACAAACACTGGACT...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CACAACAGCGAAGGGAGCTCCCACAAAAATGTTTGCCCAACATTTCCTTCTTTTTCACAAAAAGGTATTTaGTGGCAATGTCATTCTTCC +
Preference number: 5 (lower is better)
Translates to: HNSEGSSHKNVCPTFPSFSQKGI*WQCHSS
Trigger: GGAAGAATGACATTGCCACAAAATACCTTTTTGTGA...AAAAGAAGGAAATGTTGGGCAAACATTTTTGTGGGAGCTCCCTTCGCTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS TCA 90 bp GACTGCAGTAGGTTACTACCAGAAACTGAGAGTGTAATGTCTATATaGTGCATTATAAACAACGGCTCTTCCTGTGTCTGGTATGGAAAA +
Preference number: 5 (lower is better)
Translates to: DCSRLLPETESVMSI*CIINNGSSCVWYGK
Trigger: TTTTCCATACCAGACACAGGAAGAGCCGTTGTTTATAATGCATCATATAGACATTACACTCTCAGTTTCTGGTAGTAACCTACTGCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
CDS CCA 90 bp GTGGTAAGGTATGGTTGCATAGTCATTGCATGTTTAACCATGAGCTaGGGTCTTATTTTGCTGAATAAGAACAAAGTGGTTATGCAAGCT +
Preference number: 5 (lower is better)
Translates to: VVRYGCIVIACLTMS*GLILLNKNKVVMQA
Trigger: AGCTTGCATAACCACTTTGTTCTTATTCAGCAAAATAAGACCCCAGCTCATGGTTAAACATGCAATGACTATGCAACCATACCTTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS-3UTR CAA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTAGGTGCATCATTACATaGTTTGATTTCTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: MTSTLSFICAANSVESEFRCIIT*FDFFRL
Trigger: AAGCCTGAAGAAATCAAACAATGTAATGATGCACCT...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp CCACTGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTTTTGTTTGTTGTCATTaGGTTTTGTGTCAGACAGTC +
Preference number: 5 (lower is better)
Translates to: PLLVFCTTLAICGRSLYFFVCCH*VLCQTV
Trigger: GACTGTCTGACACAAAACCAAATGACAACAAACAAA...AAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCAGTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACCCCCCAACAAATAACTaGGAAATTCTGCCTTATTGT +
Preference number: 5 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDPPTNN*EILPYC
Trigger: ACAATAAGGCAGAATTTCCAAGTTATTTGTTGGGGG...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TGCTGGTTTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACCTTCAGGTGTTAGTTTaGGTTCATATGCTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: CWFSALLLQFVVDLCTLDLQVLV*VHMLSF
Trigger: AAAGGAAAGCATATGAACCAAAACTAACACCTGAAG...GTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATCTTGTCATTGCTTCTTaGTCATTGTGTGGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANLVIAS*SLCGVG
Trigger: TCCAACTCCACACAATGACAAAGAAGCAATGACAAG...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp ATGACGTCAACACTTTCATTCATCTGTGCTGCCAACTCCGTAGAGTCTGAATTTACAGTCATGCCATATTaGATGATGAGCTTCATTAGA +
Preference number: 5 (lower is better)
Translates to: MTSTLSFICAANSVESEFTVMPY*MMSFIR
Trigger: TCTAATGAAGCTCATCATCAAATATGGCATGACTGT...AAATTCAGACTCTACGGAGTTGGCAGCACAGATGAATGAAAGTGTTGACGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS GCA 90 bp TTCATTAGATCTTCCTCAATAGTGGCAAGAAAAGTTTCACTTGGATaGTCCATCAGTGGTACAACTAGCTCTAGGATTTTTGCAACATTG +
Preference number: 5 (lower is better)
Translates to: FIRSSSIVARKVSLG*SISGTTSSRIFATL
Trigger: CAATGTTGCAAAAATCCTAGAGCTAGTTGTACCACTGATGGAGCATCCAAGTGAAACTTTTCTTGCCACTATTGAGGAAGATCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CCA 90 bp TCTGAAACATTGCTATTTTCCACACCAGAAATCATATCCTCTTGCTaGTCCATGTCTGAAGACCTTACACGAGAAAGTCTTAATGTAAGT +
Preference number: 5 (lower is better)
Translates to: SETLLFSTPEIISSC*SMSEDLTRESLNVS
Trigger: ACTTACATTAAGACTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAAGAGGATATGATTTCTGGTGTGGAAAATAGCAATGTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTAGGCACTGGGCTATTTaGCTGTGGCATAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFRHWAI*LWHKSV
Trigger: AACAGATTTATGCCACAGCAAAATAGCCCAGTGCCT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGAAGTCTGGGGTTGTTTaGCAGCAACTGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWKSGVV*QQLKCS
Trigger: AGAACACTTCAGTTGCTGCAAAACAACCCCAGACTT...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp TACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAGCGATGACCCATCTTTATCCCTCTaGATTTTCGGAATGACAAAA +
Preference number: 5 (lower is better)
Translates to: YSCNLWSIFVLWTANSDDPSLSL*IFGMTK
Trigger: TTTTGTCATTCCGAAAATCAAGAGGGATAAAGATGG...GTCATCGCTATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGACAGCTCACACAATGTaGCACTACAGTCATGCCATA +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWTAHTM*HYSHAI
Trigger: TATGGCATGACTGTAGTGCAACATTGTGTGAGCTGT...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS GCA 90 bp TTTTCTGAAACATTGCTATTTTCCACACCAGAAATCATATCCTCTTaGTGGTCCATGTCTGAAGACCTTACACGAGAAAGTCTTAATGTA +
Preference number: 5 (lower is better)
Translates to: FSETLLFSTPEIISS*WSMSEDLTRESLNV
Trigger: TACATTAAGACTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAAGAGGATATGATTTCTGGTGTGGAAAATAGCAATGTTTCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CCA 90 bp GATAACCATGAAATCATTTTGCGTACTACATTTAGTGGTAAGGTATaGTTGCATAGTCATTGCATGTTTAACCATGAGCTGGGGTCTTAT +
Preference number: 5 (lower is better)
Translates to: DNHEIILRTTFSGKV*LHSHCMFNHELGSY
Trigger: ATAAGACCCCAGCTCATGGTTAAACATGCAATGACTATGCAACCATACCTTACCACTAAATGTAGTACGCAAAATGATTTCATGGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTGGGCGGTTTATATCTaGTGGAGTAATGGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFWAVYI*WSNGCF
Trigger: AAAACACCCATTACTCCACAAGATATAAACCGCCCA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATAAGACTTTCACAGTTTaGTCAGTTGAAAGCTTATCC +
Preference number: 5 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANKTFTV*SVESLS
Trigger: GGATAAGCTTTCAACTGACAAAACTGTGAAAGTCTT...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGAGCTCGATGCATAATTaGGCCAGTTGTCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWSSMHN*ASCLNF
Trigger: GAAATTGAGACAACTGGCCAAATTATGCATCGAGCT...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGCAAGAAAAGTTTCACTaGGATGCTCCATCAGTGGTA +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWQEKFH*DAPSVV
Trigger: TACCACTGATGGAGCATCCAAGTGAAACTTTTCTTG...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTGTGTTGATTGCCTGTaGTACCTGGTAAGACATCTT +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFCVDCL*YLVRHL
Trigger: AAGATGTCTTACCAGGTACAACAGGCAATCAACACA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTACCTCTTCTGTGATTTaGGAATTAGCCATGTCACTC +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFTSSVI*ELAMSL
Trigger: GAGTGACATGGCTAATTCCAAAATCACAGAAGAGGT...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp TTTCTGCACTACTCTTGCAATTTGTGGTCGATCTTTGTACTTTGGACAGCAAATATTTGTGGTCGATCTTaGTACTTTGGACAGCAAATA +
Preference number: 5 (lower is better)
Translates to: FLHYSCNLWSIFVLWTANICGRS*YFGQQI
Trigger: TATTTGCTGTCCAAAGTACAAAGATCGACCACAAAT...ATTTGCTGTCCAAAGTACAAAGATCGACCACAAATTGCAAGAGTAGTGCAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652901.1
CDS TCA 90 bp GATTCCTCATATTTAAGAATGTGCTCAACTAGGTTATCAACAAGTTaGGTACAAGCTTTCTTCACAGGTTTATATGAGGAATCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: DSSYLRMCSTRLSTS*VQAFFTGLYEESSS
Trigger: CGAAGAGGATTCCTCATATAAACCTGTGAAGAAAGCTTGTACTCAACTTGTTGATAACCTAGTTGAGCACATTCTTAAATATGAGGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CCA 90 bp GTACTGTATAACTCTTTCAATTACATCCTCAATGTACACAGCTTTTaGCATGTTAGGGGATGTCATAATGTTGATAGTTGTAAGACAAGC +
Preference number: 5 (lower is better)
Translates to: VLYNSFNYILNVHSF*HVRGCHNVDSCKTS
Trigger: GCTTGTCTTACAACTATCAACATTATGACATCCCCTAACATGCCAAAAGCTGTGTACATTGAGGATGTAATTGAAAGAGTTATACAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTTTCAGGCCTTGATTTaGTTGTTTCTGATCTGCCAT +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFFQALI*LFLICH
Trigger: ATGGCAGATCAGAAACAACAAAATCAAGGCCTGAAA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTTGTTCGAACAGCAATaGCATTTTCACCAAGAACTC +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFLFEQQ*HFHQEL
Trigger: GAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACAA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTTTAAGTCTTCCTGTTTaGCAACTTTCTTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFLSLPV*QLSSSL
Trigger: GAGACTGGAAGAAAGTTGCAAAACAGGAAGACTTAA...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTTTACCATAGACTCCTaGAATGACTGCAGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWFTIDS*NDCSRL
Trigger: TAACCTACTGCAGTCATTCAAGGAGTCTATGGTAAA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp CTACATTTACAAAAACTCCTTCTGCAGATAGGTCATAGATACTGCATGCTTTTTCAGGAAGTCCAGTGTTaGTTTTGGATGAAAATGAAC +
Preference number: 5 (lower is better)
Translates to: LHLQKLLLQIGHRYCMLFQEVQC*FWMKMN
Trigger: GTTCATTTTCATCCAAAACAAACACTGGACTTCCTG...AAAAAGCATGCAGTATCTATGACCTATCTGCAGAAGGAGTTTTTGTAAATGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGTTTTCTGCACTACTCTaGCAATTTGTGGTCGATCTT +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWFSALL*QFVVDL
Trigger: AAGATCGACCACAAATTGCAAGAGTAGTGCAGAAAA...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGCTTCAGGTGTTAGTTTaGGTTCATATGCTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWLQVLV*VHMLSF
Trigger: AAAGGAAAGCATATGAACCAAAACTAACACCTGAAG...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS-3UTR CAA 90 bp AATATTGCAGGATACAATAAAACCCTGGAGTTAATTGTTTACACCCTCTTATGGGAAGTGCTGGTTTGTTaGTTAGAAGTGAAGTGTTAT +
Preference number: 5 (lower is better)
Translates to: NIAGYNKTLELIVYTLLWEVLVC*LEVKCY
Trigger: ATAACACTTCACTTCTAACAAACAAACCAGCACTTC...CCATAAGAGGGTGTAAACAATTAACTCCAGGGTTTTATTGTATCCTGCAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282516.13
CDS CCA 72 bp CTCCTGTCGGCGGGGGCGTCCCTCCCTGCGGCTTGGTaGTGTCGGGTGAGTCGGTACCGACGGAGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: LLSAGASLPAAW*CRVSRYRRREG
Trigger: CCCCTCCCTCCGTCGGTACCGACTCACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCCGCCGACAGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282516.13
ENST00000448238.2
CDS CCA 72 bp ATTCTCCTGTCGGCGGGGGCGTCCCTCCCTGCGGCTTaGTGGTGTCGGGTGAGTCGGTACCGACGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: ILLSAGASLPAA*WCRVSRYRRRE
Trigger: CTCCCTCCGTCGGTACCGACTCACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCCGCCGACAGGAGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS GCA 72 bp GGAACCAATTCTCCTGTCGGCGGGGGCGTCCCTCCCTaGGGCTTGGTGGTGTCGGGTGAGTCGGTACCGACG +
Preference number: 6 (lower is better)
Translates to: GTNSPVGGGVPP*GLVVSGESVPT
Trigger: CGTCGGTACCGACTCACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCCGCCGACAGGAGAATTGGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp AATTCTCCTGTCGGCGGGGGCGTCCCTCCCTGCGGCTaGGTGGTGTCGGGTGAGTCGGTACCGACGGAGGGA +
Preference number: 6 (lower is better)
Translates to: NSPVGGGVPPCG*VVSGESVPTEG
Trigger: TCCCTCCGTCGGTACCGACTCACCCGACACCACCAAGCCGCAGGGAGGGACGCCCCCGCCGACAGGAGAATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp ACTTCCCATTTCCCAAACACTGGGCGAATCGGCGTCTaGATCCAAGGGGAGGCCGAGGCCGCTGTGGCGAGA +
Preference number: 6 (lower is better)
Translates to: TSHFPNTGRIGV*IQGEAEAAVAR
Trigger: TCTCGCCACAGCGGCCTCGGCCTCCCCTTGGATTCAGACGCCGATTCGCCCAGTGTTTGGGAAATGGGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp GCTGGCCTTGACCCATTTCCCGTAGAACCCGTCTCCTaGGAAGCTGGTCTATTACCTCCTGTAGCACCCCCA +
Preference number: 6 (lower is better)
Translates to: AGLDPFPVEPVS*EAGLLPPVAPP
Trigger: TGGGGGTGCTACAGGAGGTAATAGACCAGCTTCTCAGGAGACGGGTTCTACGGGAAATGGGTCAAGGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 90 bp TCCTGCAGGGCTTTGTGGGGCGTATGGACTAGGCACTGGGCTATTTaGCTGTGGCATAAATCTGTTCCCAGAGCTTGTCTGTGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: SCRALWGVWTRHWAI*LWHKSVPRACLWWH
Trigger: GTGCCACCACAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp ATTAGGACTCCTTGCCAGGACGGCCTGCAACAAGACTaGTATGTCACCTTCTGGGTCATCACTGCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: IRTPCQDGLQQD*YVTFWVITAKV
Trigger: AACCTTGGCAGTGATGACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp TGGGGCGTATGGACTAGGCACTGGGCTATTTTGCTGTaGCATAAATCTGTTCCCAGAGCTTGTCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: WGVWTRHWAILL*HKSVPRACLWW
Trigger: CCACCACAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp TCCTGCAGGGCTTTGTGGGGCGTATGGACTAGGCACTaGGCTATTTTGCTGTGGCATAAATCTGTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: SCRALWGVWTRH*AILLWHKSVPR
Trigger: TCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp AGGATGGGAATATGGCATGTATCCTGCAGGGCTTTGTaGGGCGTATGGACTAGGCACTGGGCTATTTTGCTG +
Preference number: 6 (lower is better)
Translates to: RMGIWHVSCRAL*GVWTRHWAILL
Trigger: CAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGATACATGCCATATTCCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS TCA 72 bp GAGGATCTCAATGTTTCTGGTCTTCGAACCCTAGACTaGTCCCCTCGATGTCGCTCTGATTCACCCCTGTCA +
Preference number: 6 (lower is better)
Translates to: EDLNVSGLRTLD*SPRCRSDSPLS
Trigger: TGACAGGGGTGAATCAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCAGAAACATTGAGATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS GCA 72 bp TCCCTGAAAACATTAGGACTCCTTGCCAGGACGGCCTaGAACAAGACTGGTATGTCACCTTCTGGGTCATCA +
Preference number: 6 (lower is better)
Translates to: SLKTLGLLARTA*NKTGMSPSGSS
Trigger: TGATGACCCAGAAGGTGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTTTTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS GCA 72 bp CTGCATGCTTTTCTCCCTGAAAACATTAGGACTCCTTaGCAGGACGGCCTGCAACAAGACTGGTATGTCACC +
Preference number: 6 (lower is better)
Translates to: LHAFLPENIRTP*QDGLQQDWYVT
Trigger: GGTGACATACCAGTCTTGTTGCAGGCCGTCCTGGCAAGGAGTCCTAATGTTTTCAGGGAGAAAAGCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS CAA 72 bp GCTTTGTGGGGCGTATGGACTAGGCACTGGGCTATTTaGCTGTGGCATAAATCTGTTCCCAGAGCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: ALWGVWTRHWAI*LWHKSVPRACL
Trigger: CAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS TCA 72 bp TGTCTGTGGTGGCACAAACCGGCTGGAGGGGCTATGTaGGATAGTGGTTTGTTGATAATTGGAAGATGCAGG +
Preference number: 6 (lower is better)
Translates to: CLWWHKPAGGAM*DSGLLIIGRCR
Trigger: CCTGCATCTTCCAATTATCAACAAACCACTATCTCACATAGCCCCTCCAGCCGGTTTGTGCCACCACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS TCA 72 bp GTGTTGGCGGTTTCCACGGATCATGGAGTAAAGGTGTaGACACAAAGCGCTAGAGGACTCGTCTTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: VLAVSTDHGVKV*TQSARGLVLSE
Trigger: TTCAGACAAGACGAGTCCTCTAGCGCTTTGTGTTCACACCTTTACTCCATGATCCGTGGAAACCGCCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
ENST00000652901.1
CDS GCA 72 bp CTTTGTGGGGCGTATGGACTAGGCACTGGGCTATTTTaGTGTGGCATAAATCTGTTCCCAGAGCTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: LCGAYGLGTGLF*CGINLFPELVC
Trigger: ACAGACAAGCTCTGGGAACAGATTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp ATATGGCATGTATCCTGCAGGGCTTTGTGGGGCGTATaGACTAGGCACTGGGCTATTTTGCTGTGGCATAAA +
Preference number: 6 (lower is better)
Translates to: IWHVSCRALWGV*TRHWAILLWHK
Trigger: TTTATGCCACAGCAAAATAGCCCAGTGCCTAGTCCATACGCCCCACAAAGCCCTGCAGGATACATGCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp AGTTCCTTCACTTCCAGCAGGGGAGCATACTGGCTGTaGAGATCTCAAGGGAAAAGATGCAGCATTCCTCAT +
Preference number: 6 (lower is better)
Translates to: SSFTSSRGAYWL*RSQGKRCSIPH
Trigger: ATGAGGAATGCTGCATCTTTTCCCTTGAGATCTCCACAGCCAGTATGCTCCCCTGCTGGAAGTGAAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp TTTAGGAGTTCCTTCACTTCCAGCAGGGGAGCATACTaGCTGTGGAGATCTCAAGGGAAAAGATGCAGCATT +
Preference number: 6 (lower is better)
Translates to: FRSSFTSSRGAY*LWRSQGKRCSI
Trigger: AATGCTGCATCTTTTCCCTTGAGATCTCCACAGCCAGTATGCTCCCCTGCTGGAAGTGAAGGAACTCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CAA 90 bp GACTTGATACCGATGCTTGTTGCATCTGTGGATGTGTTGTGTAACTaGAAGGATGGGAATATGGCATGTATCCTGCAGGGCTTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: DLIPMLVASVDVLCN*KDGNMACILQGFVG
Trigger: CCCCACAAAGCCCTGCAGGATACATGCCATATTCCCATCCTTCAAGTTACACAACACATCCACAGATGCAACAAGCATCGGTATCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS TCA 72 bp CGATGCTTGTTGCATCTGTGGATGTGTTGTGTAACTTaGAGGATGGGAATATGGCATGTATCCTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RCLLHLWMCCVT*RMGIWHVSCRA
Trigger: AGCCCTGCAGGATACATGCCATATTCCCATCCTTCAAGTTACACAACACATCCACAGATGCAACAAGCATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp GCCATGTTCATTTCTACTAGAGGATCTCAATGTTTCTaGTCTTCGAACCCTAGACTGATCCCCTCGATGTCG +
Preference number: 6 (lower is better)
Translates to: AMFISTRGSQCF*SSNPRLIPSMS
Trigger: CGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCAGAAACATTGAGATCCTCTAGTAGAAATGAACATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CCA 72 bp ACGCTTGCGTTTGTTCATTTTCACACGTTCACAAAGTaGCATGGTGGACTCAATTTCTGCCAGGAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: TLAFVHFHTFTK*HGGLNFCQEFR
Trigger: CCTGAACTCCTGGCAGAAATTGAGTCCACCATGCCACTTTGTGAACGTGTGAAAATGAACAAACGCAAGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000503274.1
ENST00000504430.5
ENST00000652901.1
CDS CCA 72 bp ATGCCGTTTAAGTCAAACAAGGTTGCTGACCCCTCTTaGCTAGGCTCAATTCTCTTGCTCCAGAAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: MPFKSNKVADPS*LGSILLLQKKE
Trigger: TTCCTTCTTCTGGAGCAAGAGAATTGAGCCTAGCCAAGAGGGGTCAGCAACCTTGTTTGACTTAAACGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504430.5
ENST00000509429.1
CDS CAA 72 bp ACCTGGTTGAGGCTATGGACAAGCTGTGAAACCAAATaGTCATCCCTACAAGCCAAAAGGCAGTTCACCTCT +
Preference number: 6 (lower is better)
Translates to: TWLRLWTSCETK*SSLQAKRQFTS
Trigger: AGAGGTGAACTGCCTTTTGGCTTGTAGGGATGACAATTTGGTTTCACAGCTTGTCCATAGCCTCAACCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS GCA 72 bp TCTGTAGATGGCTTTCCAGAATCCCTCCTATTGTCATaGCTGTGTTTTGGTGTTTCAGGTCGCCCTTCATTT +
Preference number: 6 (lower is better)
Translates to: SVDGFPESLLLS*LCFGVSGRPSF
Trigger: AAATGAAGGGCGACCTGAAACACCAAAACACAGGCATGACAATAGGAGGGATTCTGGAAAGCCATCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CCA 72 bp GAACACCTCGTTGCATATCAAGCCTTGCTAGAATACTaGGGTCTACAGCAACAACCTCAGACAAACACTTCA +
Preference number: 6 (lower is better)
Translates to: EHLVAYQALLEY*GLQQQPQTNTS
Trigger: TGAAGTGTTTGTCTGAGGTTGTTGCTGTAGACCCCAGTATTCTAGCAAGGCTTGATATGCAACGAGGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp AAGGTTGCTGACCCCTCTTGGCTAGGCTCAATTCTCTaGCTCCAGAAGAAGGAAGATAGGGATAAAAGAGAA +
Preference number: 6 (lower is better)
Translates to: KVADPSWLGSIL*LQKKEDRDKRE
Trigger: TTCTCTTTTATCCCTATCTTCCTTCTTCTGGAGCAAGAGAATTGAGCCTAGCCAAGAGGGGTCAGCAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504430.5
ENST00000509429.1
CDS CAA 90 bp TCTGTTGATACCTGGTTGAGGCTATGGACAAGCTGTGAAACCAAATaGTCATCCCTACAAGCCAAAAGGCAGTTCACCTCTTCTGCTATT +
Preference number: 6 (lower is better)
Translates to: SVDTWLRLWTSCETK*SSLQAKRQFTSSAI
Trigger: AATAGCAGAAGAGGTGAACTGCCTTTTGGCTTGTAGGGATGACAATTTGGTTTCACAGCTTGTCCATAGCCTCAACCAGGTATCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS TCA 72 bp GGAAGGAATGCTGTTTGTTCTTGCTGCGACAAACATTaGGCAGCATTTAGTGGGCGGTTTATATCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: GRNAVCSCCDKH*AAFSGRFISCG
Trigger: TCCACAAGATATAAACCGCCCACTAAATGCTGCTCAATGTTTGTCGCAGCAAGAACAAACAGCATTCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS GCA 72 bp ACAAGCCAAAAGGCAGTTCACCTCTTCTGCTATTCGTaGATTAAAGAGAAGGCTCTTTGTAGTTGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: TSQKAVHLFCYS*IKEKALCSCSR
Trigger: CCTGCTACAACTACAAAGAGCCTTCTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGCCTTTTGGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS GCA 72 bp GTCATCCCTACAAGCCAAAAGGCAGTTCACCTCTTCTaGTATTCGTGCATTAAAGAGAAGGCTCTTTGTAGT +
Preference number: 6 (lower is better)
Translates to: VIPTSQKAVHLF*YSCIKEKALCS
Trigger: ACTACAAAGAGCCTTCTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGCCTTTTGGCTTGTAGGGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS CCA 72 bp GTTTGTTCATTTTCACACGTTCACAAAGTGGCATGGTaGACTCAATTTCTGCCAGGAGTTCAGGGGGTAATT +
Preference number: 6 (lower is better)
Translates to: VCSFSHVHKVAW*TQFLPGVQGVI
Trigger: AATTACCCCCTGAACTCCTGGCAGAAATTGAGTCCACCATGCCACTTTGTGAACGTGTGAAAATGAACAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000503274.1
ENST00000504430.5
ENST00000652901.1
CDS CAA 72 bp CATGTATGTTTCTCAAACCACCTGCAACAATGGGACTaGATACCGATGCTTGTTGCATCTGTGGATGTGTTG +
Preference number: 6 (lower is better)
Translates to: HVCFSNHLQQWD*IPMLVASVDVL
Trigger: CAACACATCCACAGATGCAACAAGCATCGGTATCAAGTCCCATTGTTGCAGGTGGTTTGAGAAACATACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CAA 72 bp GTGGAGATCTCAAGGGAAAAGATGCAGCATTCCTCATaGTTGAAGAATCTCCATCGTCACTACTTAGCCTGT +
Preference number: 6 (lower is better)
Translates to: VEISREKMQHSS*LKNLHRHYLAC
Trigger: ACAGGCTAAGTAGTGACGATGGAGATTCTTCAACAATGAGGAATGCTGCATCTTTTCCCTTGAGATCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CAA 72 bp GGCTCTTCCTGTGTCTGGTATGGAAAACAGGCTAGATaGTCTGCTATATACAAGAGCATAGTCACGTCTGTT +
Preference number: 6 (lower is better)
Translates to: GSSCVWYGKQAR*SAIYKSIVTSV
Trigger: AACAGACGTGACTATGCTCTTGTATATAGCAGACAATCTAGCCTGTTTTCCATACCAGACACAGGAAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
CDS CAA 90 bp ACACTAGGTGGAAAAAGTAGAACACTGGTGGTCTTCCCACTTCTTTaGGTCATTATGACTAAGTCAGTTGGCACACAAGTGAAGATCTCC +
Preference number: 6 (lower is better)
Translates to: TLGGKSRTLVVFPLL*VIMTKSVGTQVKIS
Trigger: GGAGATCTTCACTTGTGTGCCAACTGACTTAGTCATAATGACCAAAAGAAGTGGGAAGACCACCAGTGTTCTACTTTTTCCACCTAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504430.5
ENST00000509429.1
CDS TCA 72 bp TCTCGGACACTAGTCGAATTATCCATCAATCGTCCATaGACACCTCGTTGCATATCAAGCCTTGCTAGAATA +
Preference number: 6 (lower is better)
Translates to: SRTLVELSINRP*TPRCISSLARI
Trigger: TATTCTAGCAAGGCTTGATATGCAACGAGGTGTTCATGGACGATTGATGGATAATTCGACTAGTGTCCGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CCA 72 bp TCAAATAAATATCAAAGCTCTGGGCAAACGGCCTCATaGAGGCCAAGTATCGAACAATCAAGCAAGCATCAT +
Preference number: 6 (lower is better)
Translates to: SNKYQSSGQTAS*RPSIEQSSKHH
Trigger: ATGATGCTTGCTTGATTGTTCGATACTTGGCCTCCATGAGGCCGTTTGCCCAGAGCTTTGATATTTATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp GACTTGATACCGATGCTTGTTGCATCTGTGGATGTGTaGTGTAACTTGAAGGATGGGAATATGGCATGTATC +
Preference number: 6 (lower is better)
Translates to: DLIPMLVASVDV*CNLKDGNMACI
Trigger: GATACATGCCATATTCCCATCCTTCAAGTTACACAACACATCCACAGATGCAACAAGCATCGGTATCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CAA 90 bp ATAAACAACGGCTCTTCCTGTGTCTGGTATGGAAAACAGGCTAGATaGTCTGCTATATACAAGAGCATAGTCACGTCTGTTTTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: INNGSSCVWYGKQAR*SAIYKSIVTSVFAV
Trigger: CACAGCAAAAACAGACGTGACTATGCTCTTGTATATAGCAGACAATCTAGCCTGTTTTCCATACCAGACACAGGAAGAGCCGTTGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
CDS TCA 72 bp TGGGCGGTTTATATCTTGTGGAGTAATGGGTGTTTTTaGAGTCTGTCCTGGGTACTGCACATTAAAAGGAAT +
Preference number: 6 (lower is better)
Translates to: WAVYILWSNGCF*SLSWVLHIKRN
Trigger: ATTCCTTTTAATGTGCAGTACCCAGGACAGACTTCAAAAACACCCATTACTCCACAAGATATAAACCGCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS GCA 72 bp ACATTGCTATTTTCCACACCAGAAATCATATCCTCTTaGTGGTCCATGTCTGAAGACCTTACACGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: TLLFSTPEIISS*WSMSEDLTRES
Trigger: ACTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAAGAGGATATGATTTCTGGTGTGGAAAATAGCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CCA 72 bp TTGCTATTTTCCACACCAGAAATCATATCCTCTTGCTaGTCCATGTCTGAAGACCTTACACGAGAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: LLFSTPEIISSC*SMSEDLTRESL
Trigger: AAGACTTTCTCGTGTAAGGTCTTCAGACATGGACCAGCAAGAGGATATGATTTCTGGTGTGGAAAATAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 72 bp CAGACAAACACTTCATGGCTTTTGTTCGAACAGCAATaGCATTTTCACCAAGAACTCGTAGGATCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: QTNTSWLLFEQQ*HFHQELVGSVS
Trigger: TGACACAGATCCTACGAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACAAAAGCCATGAAGTGTTTGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp AGGTTACTACCAGAAACTGAGAGTGTAATGTCTATATaGTGCATTATAAACAACGGCTCTTCCTGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: RLLPETESVMSI*CIINNGSSCVW
Trigger: CCAGACACAGGAAGAGCCGTTGTTTATAATGCATCATATAGACATTACACTCTCAGTTTCTGGTAGTAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
CDS GCA 72 bp TCTTCCTCAATAGTGGCAAGAAAAGTTTCACTTGGATaGTCCATCAGTGGTACAACTAGCTCTAGGATTTTT +
Preference number: 6 (lower is better)
Translates to: SSSIVARKVSLG*SISGTTSSRIF
Trigger: AAAAATCCTAGAGCTAGTTGTACCACTGATGGAGCATCCAAGTGAAACTTTTCTTGCCACTATTGAGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CCA 72 bp TATTATCATGTATGTTTCTCAAACCACCTGCAACAATaGGACTTGATACCGATGCTTGTTGCATCTGTGGAT +
Preference number: 6 (lower is better)
Translates to: YYHVCFSNHLQQ*DLIPMLVASVD
Trigger: ATCCACAGATGCAACAAGCATCGGTATCAAGTCCCATTGTTGCAGGTGGTTTGAGAAACATACATGATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000505998.5
ENST00000652901.1
CDS CAA 72 bp ATCATTTTGCGTACTACATTTAGTGGTAAGGTATGGTaGCATAGTCATTGCATGTTTAACCATGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: IILRTTFSGKVW*HSHCMFNHELG
Trigger: CCCCAGCTCATGGTTAAACATGCAATGACTATGCAACCATACCTTACCACTAAATGTAGTACGCAAAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp CAGCTCACACAATGTTGCACTACAGTCATGCCATATTaGATGATGAGCTTCATTAGATCTTCCTCAATAGTG +
Preference number: 6 (lower is better)
Translates to: QLTQCCTTVMPY*MMSFIRSSSIV
Trigger: CACTATTGAGGAAGATCTAATGAAGCTCATCATCAAATATGGCATGACTGTAGTGCAACATTGTGTGAGCTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 90 bp GGATGCTCCATCAGTGGTACAACTAGCTCTAGGATTTTTGCAACATaGCAGATAACCATGAAATCATTTTGCGTACTACATTTAGTGGTA +
Preference number: 6 (lower is better)
Translates to: GCSISGTTSSRIFAT*QITMKSFCVLHLVV
Trigger: TACCACTAAATGTAGTACGCAAAATGATTTCATGGTTATCTGCAATGTTGCAAAAATCCTAGAGCTAGTTGTACCACTGATGGAGCATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp TATCTTTCAACTCTATGTGATCTGTTGATACCTGGTTaGGGCTATGGACAAGCTGTGAAACCAAATTGTCAT +
Preference number: 6 (lower is better)
Translates to: YLSTLCDLLIPG*GYGQAVKPNCH
Trigger: ATGACAATTTGGTTTCACAGCTTGTCCATAGCCTCAACCAGGTATCAACAGATCACATAGAGTTGAAAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000505998.5
ENST00000652901.1
CDS TCA 72 bp ATCCAATTCCACTTCATCATATATAGGTCCCTGTTGTaGTATCTGTTGTTGATTCTGTACCACAGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: IQFHFIIYRSLL*YLLLILYHRSL
Trigger: CAGACTTCTGTGGTACAGAATCAACAACAGATATCACAACAGGGACCTATATATGATGAAGTGGAATTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 90 bp GAAGACCTTACACGAGAAAGTCTTAATGTAAGTTTAGTAGAGTCCTaGGATGGAGAACTAATTATATCATACATTGCCGCTTTCTCACTC +
Preference number: 6 (lower is better)
Translates to: EDLTRESLNVSLVES*DGELIISYIAAFSL
Trigger: GAGTGAGAAAGCGGCAATGTATGATATAATTAGTTCTCCATCCAAGGACTCTACTAAACTTACATTAAGACTTTCTCGTGTAAGGTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 90 bp TCTGCCTTATTGTCAGGGTGTGCTTTATTAGTGTCTACTTTACTCTaGTTACCCTCTGTCCTTTTGTCATCTTTACTAGTTGGTGATTTA +
Preference number: 6 (lower is better)
Translates to: SALLSGCALLVSTLL*LPSVLLSSLLVGDL
Trigger: TAAATCACCAACTAGTAAAGATGACAAAAGGACAGAGGGTAACAAGAGTAAAGTAGACACTAATAAAGCACACCCTGACAATAAGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 90 bp CAACAACCTCAGACAAACACTTCATGGCTTTTGTTCGAACAGCAATaGCATTTTCACCAAGAACTCGTAGGATCTGTGTCAAATAAATAT +
Preference number: 6 (lower is better)
Translates to: QQPQTNTSWLLFEQQ*HFHQELVGSVSNKY
Trigger: ATATTTATTTGACACAGATCCTACGAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACAAAAGCCATGAAGTGTTTGTCTGAGGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp TGTCATAATGTTGATAGTTGTAAGACAAGCATCCGCTaGTTTTGTAACTCTCTCCATAATAAGGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: CHNVDSCKTSIR*FCNSLHNKVSP
Trigger: TGGAGAGACCTTATTATGGAGAGAGTTACAAAATCAGCGGATGCTTGTCTTACAACTATCAACATTATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp TTCTTCACTTCTTGCTCGAACATTAGACTTGGATGCTaGATAAAGGCAAATCCTAGACCAATGATAGCTTTT +
Preference number: 6 (lower is better)
Translates to: FFTSCSNIRLGC*IKANPRPMIAF
Trigger: AAAAGCTATCATTGGTCTAGGATTTGCCTTTATTCAGCATCCAAGTCTAATGTTCGAGCAAGAAGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CCA 72 bp TATGGTTGCATAGTCATTGCATGTTTAACCATGAGCTaGGGTCTTATTTTGCTGAATAAGAACAAAGTGGTT +
Preference number: 6 (lower is better)
Translates to: YGCIVIACLTMS*GLILLNKNKVV
Trigger: AACCACTTTGTTCTTATTCAGCAAAATAAGACCCCAGCTCATGGTTAAACATGCAATGACTATGCAACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CCA 72 bp GAAATCATTTTGCGTACTACATTTAGTGGTAAGGTATaGTTGCATAGTCATTGCATGTTTAACCATGAGCTG +
Preference number: 6 (lower is better)
Translates to: EIILRTTFSGKV*LHSHCMFNHEL
Trigger: CAGCTCATGGTTAAACATGCAATGACTATGCAACCATACCTTACCACTAAATGTAGTACGCAAAATGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp TTGTCAGGGTGTGCTTTATTAGTGTCTACTTTACTCTaGTTACCCTCTGTCCTTTTGTCATCTTTACTAGTT +
Preference number: 6 (lower is better)
Translates to: LSGCALLVSTLL*LPSVLLSSLLV
Trigger: AACTAGTAAAGATGACAAAAGGACAGAGGGTAACAAGAGTAAAGTAGACACTAATAAAGCACACCCTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 90 bp CAGTCTATTTTCATTTTGTTTAGGCTCAACTATGGTGCTCTCGTTTaGTTTGCATTCAGTTGTTCTGCTCTCATTCTGTTTAAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: QSIFILFRLNYGALV*FAFSCSALILFKFF
Trigger: GAAGAACTTAAACAGAATGAGAGCAGAACAACTGAATGCAAACAAAACGAGAGCACCATAGTTGAGCCTAAACAAAATGAAAATAGACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 90 bp AACCATGAAATCATTTTGCGTACTACATTTAGTGGTAAGGTATGGTaGCATAGTCATTGCATGTTTAACCATGAGCTGGGGTCTTATTTT +
Preference number: 6 (lower is better)
Translates to: NHEIILRTTFSGKVW*HSHCMFNHELGSYF
Trigger: AAAATAAGACCCCAGCTCATGGTTAAACATGCAATGACTATGCAACCATACCTTACCACTAAATGTAGTACGCAAAATGATTTCATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 90 bp GGCACCATAGTATCTATTGAAACAAGCCCACACAAATTTAAAATTTaGTGTCACTTTATTTACAACAGCTCCAAGACAGCTCACACAATG +
Preference number: 6 (lower is better)
Translates to: GTIVSIETSPHKFKI*CHFIYNSSKTAHTM
Trigger: CATTGTGTGAGCTGTCTTGGAGCTGTTGTAAATAAAGTGACACAAAATTTTAAATTTGTGTGGGCTTGTTTCAATAGATACTATGGTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS TCA 72 bp TCCACAGTATCAGAGTTCATCTTTAATGTGCTAAACTaGGAAGGTGTGGTTTTGATAATGCTTCTAAGAAAC +
Preference number: 6 (lower is better)
Translates to: STVSEFIFNVLN*EGVVLIMLLRN
Trigger: GTTTCTTAGAAGCATTATCAAAACCACACCTTCTCAGTTTAGCACATTAAAGATGAACTCTGATACTGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp ACACGAGAAAGTCTTAATGTAAGTTTAGTAGAGTCCTaGGATGGAGAACTAATTATATCATACATTGCCGCT +
Preference number: 6 (lower is better)
Translates to: TRESLNVSLVES*DGELIISYIAA
Trigger: AGCGGCAATGTATGATATAATTAGTTCTCCATCCAAGGACTCTACTAAACTTACATTAAGACTTTCTCGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 72 bp TCGGTAATGTTTAAAATTTTCCTTGTCATTGCTTCTTaGTCATTGTGTGGAGTTGGAGTAAACCAGAGTTTC +
Preference number: 6 (lower is better)
Translates to: SVMFKIFLVIAS*SLCGVGVNQSF
Trigger: GAAACTCTGGTTTACTCCAACTCCACACAATGACAAAGAAGCAATGACAAGGAAAATTTTAAACATTACCGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp ATCAGTGGTACAACTAGCTCTAGGATTTTTGCAACATaGCAGATAACCATGAAATCATTTTGCGTACTACAT +
Preference number: 6 (lower is better)
Translates to: ISGTTSSRIFAT*QITMKSFCVLH
Trigger: ATGTAGTACGCAAAATGATTTCATGGTTATCTGCAATGTTGCAAAAATCCTAGAGCTAGTTGTACCACTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000652901.1
CDS CAA 72 bp TTAGTGTCTACTTTACTCTTGTTACCCTCTGTCCTTTaGTCATCTTTACTAGTTGGTGATTTAAAACCAAGT +
Preference number: 6 (lower is better)
Translates to: LVSTLLLLPSVL*SSLLVGDLKPS
Trigger: ACTTGGTTTTAAATCACCAACTAGTAAAGATGACAAAAGGACAGAGGGTAACAAGAGTAAAGTAGACACTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000504430.5
ENST00000652901.1
CDS CAA 72 bp CTCCTGTTTTTCGGTTTATCGCTTTATCATATACTTTaGCAGATTCAGATGGAGAGTACTTCTGAATTTTAC +
Preference number: 6 (lower is better)
Translates to: LLFFGLSLYHIL*QIQMESTSEFY
Trigger: GTAAAATTCAGAAGTACTCTCCATCTGAATCTGCAAAAGTATATGATAAAGCGATAAACCGAAAAACAGGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000282516.13
ENST00000448238.2
ENST00000514335.1
ENST00000652901.1