RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIPAL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000001461

Ensembl transcript IDs: ENST00000003912.7, ENST00000339255.2, ENST00000358028.8, ENST00000374399.9, ENST00000432012.1, ENST00000475663.2, ENST00000488155.1

Found 733 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGAGGCCACTCAAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTaGCACCAGCCTGCTCCTCCGCCTCTGTCTGCTTCTCCTCAGGAA +
Preference number: 1 (lower is better)
Translates to: PEATQEQRGSRLHQP*HQPAPPPLSASPQE
Trigger: TTCCTGAGGAGAAGCAGACAGAGGCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTTGAGTGGCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR TCA 90 bp GGAATTCACATGGAAGGCTGCCGGGCTGGTTCCCCAACACTAGCCTaGTGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTT +
Preference number: 1 (lower is better)
Translates to: GIHMEGCRAGSPTLA*WSPVSAPCRQTGWF
Trigger: AAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGTGTTGGGGAACCAGCCCGGCAGCCTTCCATGTGAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp GAATACCCCTTTGGGCTCAGGGTCCGACCTTTAGCAGGGTCTCCATaGCGGTCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCA +
Preference number: 1 (lower is better)
Translates to: EYPFGLRVRPLAGSP*RSFSVAHDRTSHPS
Trigger: TGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGACCGTCATGGAGACCCTGCTAAAGGTCGGACCCTGAGCCCAAAGGGGTATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp ACAAATGTCAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTaGAGGCAACACGAGTGCTATCACAGATGCGGCATCAGGAGTGTC +
Preference number: 1 (lower is better)
Translates to: TNVRTFHPGLAQPAM*RQHECYHRCGIRSV
Trigger: GACACTCCTGATGCCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTGACATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp CATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATaGTGCCACTGCTCCAAACCCGAAGGCAAGGGAGCTTCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: HLTFCSALSWLRLVG*CHCSKPEGKGASQA
Trigger: GGCCTGGGAAGCTCCCTTGCCTTCGGGTTTGGAGCAGTGGCATCATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 90 bp GCTTTGAGACTCATCTCCCACCACCTTCCCTGGCTTTCCTTTCTTTaGCCAGCTCCTCTTAGCTCTGTGCCTTTGCAAATGCTGGCCCCT +
Preference number: 1 (lower is better)
Translates to: ALRLISHHLPWLSFL*PAPLSSVPLQMLAP
Trigger: AGGGGCCAGCATTTGCAAAGGCACAGAGCTAAGAGGAGCTGGGCAAAGAAAGGAAAGCCAGGGAAGGTGGTGGGAGATGAGTCTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp ATCGCATCAGAATCACTGGTGGTACCAGTTAAGAATGCAGACCCGTaGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTG +
Preference number: 1 (lower is better)
Translates to: IASESLVVPVKNADP*APLQSHLTVSAVGV
Trigger: CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGCATTCTTAACTGGTACCACCAGTGATTCTGATGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 90 bp TCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTaGAAGGGCAGGGTCTCCCTGATTCAACAGCTGACTTCCCACTGG +
Preference number: 1 (lower is better)
Translates to: SQYRTPTIGSVLTSH*KGRVSLIQQLTSHW
Trigger: CCAGTGGGAAGTCAGCTGTTGAATCAGGGAGACCCTGCCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CCA 90 bp GCCAGTGCTGCGTATGGCCATCAGCAGACAGTCCATTTATACCACTaGACAAAGATTGGGAGGAACCAGCCCAAGACAGATGATGGCTCC +
Preference number: 1 (lower is better)
Translates to: ASAAYGHQQTVHLYH*TKIGRNQPKTDDGS
Trigger: GGAGCCATCATCTGTCTTGGGCTGGTTCCTCCCAATCTTTGTCCAGTGGTATAAATGGACTGTCTGCTGATGGCCATACGCAGCACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp ATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTaGAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: IHHSCRVALSAADVL*NCFCSTGKGQGLAE
Trigger: CTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
3UTR CCA 90 bp CACCCATCAGAGATTCCTGGGTATTTGTGCCTCCCTCTGCTGGCCTaGAGGGCAGGAACTATGTCTTATTTTGTAGCCTGGGTCTTCCAA +
Preference number: 1 (lower is better)
Translates to: HPSEIPGYLCLPLLA*RAGTMSYFVAWVFQ
Trigger: TTGGAAGACCCAGGCTACAAAATAAGACATAGTTCCTGCCCTCCAGGCCAGCAGAGGGAGGCACAAATACCCAGGAATCTCTGATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp AACACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTaGCTGGTTTCCACTAGAAAAGCAATGGAGAGTCAGCTCTCCCTT +
Preference number: 1 (lower is better)
Translates to: NTSLMESCIRTVPSN*LVSTRKAMESQLSL
Trigger: AAGGGAGAGCTGACTCTCCATTGCTTTTCTAGTGGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp CACTGCAAGGGCAGGGTCTCCCTGATTCAACAGCTGACTTCCCACTaGTCACAAGGTACAAAGAAAAAGCTGAGAGCCACACCCACAAAC +
Preference number: 1 (lower is better)
Translates to: HCKGRVSLIQQLTSH*SQGTKKKLRATPTN
Trigger: GTTTGTGGGTGTGGCTCTCAGCTTTTTCTTTGTACCTTGTGACCAGTGGGAAGTCAGCTGTTGAATCAGGGAGACCCTGCCCTTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR TCA 90 bp CAGTCCTCCGCAGGTCCCACCACTCCCTGCTGGGCAGTATTGGGCTaGTTCACATGCTTATGTTACTGTCAGGGCTTACAGACATTTAAA +
Preference number: 1 (lower is better)
Translates to: QSSAGPTTPCWAVLG*FTCLCYCQGLQTFK
Trigger: TTTAAATGTCTGTAAGCCCTGACAGTAACATAAGCATGTGAATCAGCCCAATACTGCCCAGCAGGGAGTGGTGGGACCTGCGGAGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR TCA 90 bp TTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTaGTGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGG +
Preference number: 1 (lower is better)
Translates to: LCPDPSQLQSGLVCC*CSVKLFLFHRKGPR
Trigger: CCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
3UTR GCA 90 bp ATATGCGGCCAGGAAGAAAGCAACAGCCCTGTTTTGGAGAATGCTTaGTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGT +
Preference number: 1 (lower is better)
Translates to: ICGQEESNSPVLENA*FSQTYMHGDEDPES
Trigger: ACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGCTTTCTTCCTGGCCGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 90 bp TATGAGTGGAATCCTGATGTACCCCTTCCCCATCTTAACAGCCAGTaGTGCGTATGGCCATCAGCAGACAGTCCATTTATACCACTGGAC +
Preference number: 1 (lower is better)
Translates to: YEWNPDVPLPHLNSQ*CVWPSADSPFIPLD
Trigger: GTCCAGTGGTATAAATGGACTGTCTGCTGATGGCCATACGCAGCACTGGCTGTTAAGATGGGGAAGGGGTACATCAGGATTCCACTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp ACAAGTAACCTTTTGTCTGCCTATCAGCCAGTGTTGAAACAGCTTTaGAATTCACATGGAAGGCTGCCGGGCTGGTTCCCCAACACTAGC +
Preference number: 1 (lower is better)
Translates to: TSNLLSAYQPVLKQL*NSHGRLPGWFPNTS
Trigger: GCTAGTGTTGGGGAACCAGCCCGGCAGCCTTCCATGTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGCAGACAAAAGGTTACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp CAGAGAAACACACAAGTAACCTTTTGTCTGCCTATCAGCCAGTGTTaGAACAGCTTTGGAATTCACATGGAAGGCTGCCGGGCTGGTTCC +
Preference number: 1 (lower is better)
Translates to: QRNTQVTFCLPISQC*NSFGIHMEGCRAGS
Trigger: GGAACCAGCCCGGCAGCCTTCCATGTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGCAGACAAAAGGTTACTTGTGTGTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp GCAGACTCTCTGTCTTGCCTTAGCTCTGAAGGATACAGCATCCTTTaGTCACTGTCAGAGGAAGCTCAGTTACCATCCTCAAGGATGGTA +
Preference number: 1 (lower is better)
Translates to: ADSLSCLSSEGYSIL*SLSEEAQLPSSRMV
Trigger: TACCATCCTTGAGGATGGTAACTGAGCTTCCTCTGACAGTGACCAAAGGATGCTGTATCCTTCAGAGCTAAGGCAAGACAGAGAGTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp AATCCTGATGTACCCCTTCCCCATCTTAACAGCCAGTGCTGCGTATaGCCATCAGCAGACAGTCCATTTATACCACTGGACAAAGATTGG +
Preference number: 1 (lower is better)
Translates to: NPDVPLPHLNSQCCV*PSADSPFIPLDKDW
Trigger: CCAATCTTTGTCCAGTGGTATAAATGGACTGTCTGCTGATGGCCATACGCAGCACTGGCTGTTAAGATGGGGAAGGGGTACATCAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp GCAGCAGTTCCTGGGTGGCACTGTCCCCATGATCTGAAGCAGACATaGAATTACAATACGCTTTTATTCACTCATCTCAAGAAAGCTGGC +
Preference number: 1 (lower is better)
Translates to: AAVPGWHCPHDLKQT*NYNTLLFTHLKKAG
Trigger: GCCAGCTTTCTTGAGATGAGTGAATAAAAGCGTATTGTAATTTCATGTCTGCTTCAGATCATGGGGACAGTGCCACCCAGGAACTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp AACATTGCTTGCAACATTCAAGAGGGCTTGGGGACGTCAGAGCCATaGGTAACAATAACGAACCAGGGCTATGAGTGGAATCCTGATGTA +
Preference number: 1 (lower is better)
Translates to: NIACNIQEGLGTSEP*VTITNQGYEWNPDV
Trigger: TACATCAGGATTCCACTCATAGCCCTGGTTCGTTATTGTTACTCATGGCTCTGACGTCCCCAAGCCCTCTTGAATGTTGCAAGCAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 90 bp TTCTATATGGATGTTCAGCTAGACCCACGGGGCTTTAACCTTACCTaGCATGGCATCCATGGAAATATAGGGCTCAAATGGAATGGGCTT +
Preference number: 1 (lower is better)
Translates to: FYMDVQLDPRGFNLT*HGIHGNIGLKWNGL
Trigger: AAGCCCATTCCATTTGAGCCCTATATTTCCATGGATGCCATGCCAGGTAAGGTTAAAGCCCCGTGGGTCTAGCTGAACATCCATATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CCA 90 bp AGGCTGTCTAGGGAAGTGGTGAGTGTAGCTCTAAGTAGTATTCATTaGATGGAGAAATGCCACAGATCCTATGGGGAGTATTTAACCTTC +
Preference number: 1 (lower is better)
Translates to: RLSREVVSVALSSIH*MEKCHRSYGEYLTF
Trigger: GAAGGTTAAATACTCCCCATAGGATCTGTGGCATTTCTCCATCCAATGAATACTACTTAGAGCTACACTCACCACTTCCCTAGACAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp TGTTTTGGAGAATGCTTGCTTCTCCCAGACATATATGCATGGGGATaGGGACCCAGAGAGTCTCTATTGACTTCAAGGAAATTAACCAGT +
Preference number: 1 (lower is better)
Translates to: CFGECLLLPDIYAWG*GPRESLLTSRKLTS
Trigger: ACTGGTTAATTTCCTTGAAGTCAATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 90 bp GAAGTGGTGAGTGTAGCTCTAAGTAGTATTCATTGGATGGAGAAATaGCACAGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCT +
Preference number: 1 (lower is better)
Translates to: EVVSVALSSIHWMEK*HRSYGEYLTFQRNP
Trigger: AGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCTGTGGCATTTCTCCATCCAATGAATACTACTTAGAGCTACACTCACCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 90 bp GAGCTCCTTCATTTTGATTTTATTTGTAATCTGAACAAGCTGGGTTaGAGGAGCACATTGACATTGAGTTGCTATACTCAGGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: ELLHFDFICNLNKLG*RSTLTLSCYTQAGW
Trigger: CCAGCCTGCCTGAGTATAGCAACTCAATGTCAATGTGCTCCTTCAACCCAGCTTGTTCAGATTACAAATAAAATCAAAATGAAGGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR TCA 90 bp AAGCTAATGGTCACCAGCAACCTACAGAGTTTAGGTCAGCAAATCTaGGGTTGGTCCAATGTCTTAACTTTTCTAATCCGAATTCCTTTA +
Preference number: 1 (lower is better)
Translates to: KLMVTSNLQSLGQQI*GWSNVLTFLIRIPL
Trigger: TAAAGGAATTCGGATTAGAAAAGTTAAGACATTGGACCAACCTCAGATTTGCTGACCTAAACTCTGTAGGTTGCTGGTGACCATTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR GCA 90 bp CACATAGTTTGTAAACACACAAACACACATATACATACACATACTTaGACACACAGAGTTGACACCTCACCTATCTGGAATTCAGCTATC +
Preference number: 1 (lower is better)
Translates to: HIVCKHTNTHIHTHT*THRVDTSPIWNSAI
Trigger: GATAGCTGAATTCCAGATAGGTGAGGTGTCAACTCTGTGTGTGCAAGTATGTGTATGTATATGTGTGTTTGTGTGTTTACAAACTATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR GCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGAGTGCTATCACAGATaGGGCATCAGGAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVECYHR*GIRSVR
Trigger: CCTGACACTCCTGATGCCGCATCTGTGATAGCACTC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCAAATGCTGGCCCCTCTaGCTCGGGGGTGATCACCCT +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSKCWPL*LGGDHP
Trigger: AGGGTGATCACCCCCGAGGCAGAGGGGCCAGCATTT...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCTTTCCAAATCCCCCTaGGCTAATCCAGGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RVGPACHVKATRVLSQMRLSKSP*ANPGRG
Trigger: GCCTCTGCCTGGATTAGCCCAGGGGGATTTGGAAAG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCTCCCTCTGCTGGCCTaGAGGGCAGGAACTATGTCT +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSLPLLA*RAGTMS
Trigger: AGACATAGTTCCTGCCCTCCAGGCCAGCAGAGGGAG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGCAGCAGTTCCTGGGTaGCACTGTCCCCATGATCTG +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSAAVPG*HCPHDL
Trigger: CAGATCATGGGGACAGTGCCACCCAGGAACTGCTGC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGGGGCCAAGGCCTGGCTaGGAGTGCCAGGCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: FTVQNTYNRKCPDKPLQGGPRPG*ECQASS
Trigger: GGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCC...CCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR GCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGCAGACTCTCTGTCTTaGCTTAGCTCTGAAGGATAC +
Preference number: 2 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVADSLS*LSSEGY
Trigger: GTATCCTTCAGAGCTAAGGCAAGACAGAGAGTCTGC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGTCTATCCCGTCCACCTaGAATAATGCTTCCATCCCC +
Preference number: 2 (lower is better)
Translates to: RVGPACHVKATRVLSQMRSIPST*NNASIP
Trigger: GGGGATGGAAGCATTATTCCAGGTGGACGGGATAGA...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCTTTAGGATTCAGGGTTaGACCACTGTCAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSFRIQG*TTVSLE
Trigger: CTCCAGGCTGACAGTGGTTCAACCCTGAATCCTAAA...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCTAGAAGGGCACAGATaGCTGGAAGGCAGATGTACA +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSLEGHR*LEGRCT
Trigger: TGTACATCTGCCTTCCAGTCATCTGTGCCCTTCTAG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGTGGCACTGTCCCCATaGTCTGAAGCAGACATGAAA +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSVALSP*SEADMK
Trigger: TTTCATGTCTGCTTCAGATCATGGGGACAGTGCCAC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCTCTATCCCGTCCACCTaGAATAATGCTTCCATCCCC +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSSIPST*NNASIP
Trigger: GGGGATGGAAGCATTATTCCAGGTGGACGGGATAGA...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGGCATGCACATGAGGTaGAGGAAGACGAGATTTAGA +
Preference number: 2 (lower is better)
Translates to: STQGWPSLPCEGNTSAITGMHMR*RKTRFR
Trigger: TCTAAATCTCGTCTTCCTCCACCTCATGTGCATGCC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCCCATCAGAGATTCCTaGGTATTTGTGCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSPIRDS*VFVPPS
Trigger: AGAGGGAGGCACAAATACCCAGGAATCTCTGATGGG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCGGCTTTAACCTTACCTaGCATGGCATCCATGGAAAT +
Preference number: 2 (lower is better)
Translates to: QGLAESARLVPGGQGLFLGFNLT*HGIHGN
Trigger: ATTTCCATGGATGCCATGCCAGGTAAGGTTAAAGCC...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR TCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTGCCCAGCCTGCCATGTaGAGGCAACACGAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTAQPAM*RQHECY
Trigger: ATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGC...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAGGGTTGGCCCAGCCTaGCATGTGAAGGCAACACGA +
Preference number: 2 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYRVGPA*HVKATR
Trigger: TCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGAAGACAGTCACATATaGGGCCAGGAAGAAAGCAAC +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSEDSHI*GQEESN
Trigger: GTTGCTTTCTTCCTGGCCGCATATGTGACTGTCTTC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCTCCTTTTCAATCAGTaGTGGTCCTGCCCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSLLFNQ*WSCPSL
Trigger: AAGAGAAGGGCAGGACCAGCACTGATTGAAAAGGAG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 90 bp CGTATGGCCATCAGCAGACAGTCCATTTATACCACTGGACAAAGATaGGGAGGAACCAGCCCAAGACAGATGATGGCTCCACACCCACTG +
Preference number: 2 (lower is better)
Translates to: RMAISRQSIYTTGQR*GGTSPRQMMAPHPL
Trigger: CAGTGGGTGTGGAGCCATCATCTGTCTTGGGCTGGTTCCTCCCAATCTTTGTCCAGTGGTATAAATGGACTGTCTGCTGATGGCCATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCCAACCCTCATCATTTaGAATTTCCAAGACCAAGAT +
Preference number: 2 (lower is better)
Translates to: QNLPPRVGPACHVKATRVPTLII*NFQDQD
Trigger: ATCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGG...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGATCAGGCATGCACATaGGGTGGAGGAAGACGAGAT +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYDQACT*GGGRRD
Trigger: ATCTCGTCTTCCTCCACCTCATGTGCATGCCTGATC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGCCCAGCCTGCCATGTaGAGGCAACACGAGTGCTAT +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGAQPAM*RQHECY
Trigger: ATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCTGTCTGCAGTTGGGGTaGAGGAATCTGCATTTTACA +
Preference number: 2 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSCLQLG*RNLHFT
Trigger: TGTAAAATGCAGATTCCTGCACCCCAACTGCAGACA...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGCAGCAGTTCCTGGGTaGCACTGTCCCCATGATCTG +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGAAVPG*HCPHDL
Trigger: CAGATCATGGGGACAGTGCCACCCAGGAACTGCTGC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATGAGAAGTGGACAGCGTaGCTTAAGGAGGGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDEKWTA*LKEGGS
Trigger: TGACCCTCCCTCCTTAAGCCACGCTGTCCACTTCTC...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATAGGCTGTCTCTGAAATaGGCATCCCCATCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYRLSLK*ASPSFQ
Trigger: CTGGAAAGATGGGGATGCTCATTTCAGAGACAGCCT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTCATTTAACCCCCACTGGCAGGGGGATCACTTaGGGCCAGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: WKKNAHISHLCTSHLTPTGRGIT*GQEVKA
Trigger: AGCCTTGACCTCCTGGCCTCAAGTGATCCCCCTGCC...AGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTAATCCAGGCAGAGGCTaGATTCTATCCCGTCCACCT +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTNPGRG*ILSRPP
Trigger: AGGTGGACGGGATAGAATCCAGCCTCTGCCTGGATT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAATCCAGGCAGAGGCTaGATTCTATCCCGTCCACCT +
Preference number: 2 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYNPGRG*ILSRPP
Trigger: AGGTGGACGGGATAGAATCCAGCCTCTGCCTGGATT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGCAACAGCCCTGTTTTaGAGAATGCTTGCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYATALF*RMLASP
Trigger: GGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTTTTAGGATTCAGGGTTaGACCACTGTCAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTFRIQG*TTVSLE
Trigger: CTCCAGGCTGACAGTGGTTCAACCCTGAATCCTAAA...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGATCAGGCATGCACATaGGGTGGAGGAAGACGAGAT +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGDQACT*GGGRRD
Trigger: ATCTCGTCTTCCTCCACCTCATGTGCATGCCTGATC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTAGGCTGTCTCTGAAATaGGCATCCCCATCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTRLSLK*ASPSFQ
Trigger: CTGGAAAGATGGGGATGCTCATTTCAGAGACAGCCT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGCAGACTCTCTGTCTTaGCTTAGCTCTGAAGGATAC +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYADSLS*LSSEGY
Trigger: GTATCCTTCAGAGCTAAGGCAAGACAGAGAGTCTGC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATTCCTGGGTATTTGTaGCTCCCTCTGCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVIPGYL*LPLLAW
Trigger: CCAGGCCAGCAGAGGGAGGCACAAATACCCAGGAAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGGATACAGCATCCTTTaGTCACTGTCAGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYGYSIL*SLSEEA
Trigger: AGCTTCCTCTGACAGTGACCAAAGGATGCTGTATCC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATAACAGTGTCTGCAGTTaGGGTGCAGGAATCTGCATT +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYNSVCS*GAGICI
Trigger: AATGCAGATTCCTGCACCCCAACTGCAGACACTGTT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTCTAGCAAGACTGCATaGGGCCCTGGGGGTTTTAGC +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMSSKTA*GPGGFS
Trigger: GCTAAAACCCCCAGGGCCCCATGCAGTCTTGCTAGA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTCTAGCAAGACTGCATaGGGCCCTGGGGGTTTTAGC +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVSSKTA*GPGGFS
Trigger: GCTAAAACCCCCAGGGCCCCATGCAGTCTTGCTAGA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATCCCACCACCTTCCCTaGCTTTCCTTTCTTTGCCCA +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGSHHLP*LSFLCP
Trigger: TGGGCAAAGAAAGGAAAGCCAGGGAAGGTGGTGGGA...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCTCAAGAAAGCTGGCTaGCCCAAGCCTAAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLKKAG*PKPKRP
Trigger: GGGCCTTTTAGGCTTGGGCCAGCCAGCTTTCTTGAG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp GGCAAGATGTGCTCAAAACCAACCGAGGTGCCTCAGCCATTGCCTACCCTTTTGCTGGCATGGCATCCATaGAAATATAGGGCTCAAATG +
Preference number: 2 (lower is better)
Translates to: GKMCSKPTEVPQPLPTLLLAWHP*KYRAQM
Trigger: CATTTGAGCCCTATATTTCCATGGATGCCATGCCAG...CAAAAGGGTAGGCAATGGCTGAGGCACCTCGGTTGGTTTTGAGCACATCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CAA 90 bp GAAGACAGTCACATATGCGGCCAGGAAGAAAGCAACAGCCCTGTTTaGGAGAATGCTTGCTTCTCCCAGACATATATGCATGGGGATGAG +
Preference number: 2 (lower is better)
Translates to: EDSHICGQEESNSPV*ENACFSQTYMHGDE
Trigger: CTCATCCCCATGCATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGCTTTCTTCCTGGCCGCATATGTGACTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTTAGCAGGGTCTCCATaGCGGTCATTTTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVLAGSP*RSFSVA
Trigger: GGCCACAGAAAATGACCGTCATGGAGACCCTGCTAA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTGGAGTGCAGTAGCATaGTCATGGCTCACTGTAGCC +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVWSAVA*SWLTVA
Trigger: GGCTACAGTGAGCCATGATCATGCTACTGCACTCCA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTGGAGTGCAGTAGCATaGTCATGGCTCACTGTAGCC +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMWSAVA*SWLTVA
Trigger: GGCTACAGTGAGCCATGATCATGCTACTGCACTCCA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAATTCAAGACCCTCCATaGTTCGGCCTCCACTGCTTA +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGIQDPP*FGLHCL
Trigger: TAAGCAGTGGAGGCCGAATCATGGAGGGTCTTGAAT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGCAGGGTCGCTGCTGATGTTCTGTaGAATTGTTTCTGTTCCACA +
Preference number: 2 (lower is better)
Translates to: YRTPTIGSVLTSHCKGRVAADVL*NCFCST
Trigger: TGTGGAACAGAAACAATTTCACAGAACATCAGCAGC...GACCCTGCCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCCCTGTTTTGGAGAATaGTTGCTTCTCCCAGACATA +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYPCFGE*LLLPDI
Trigger: TATGTCTGGGAGAAGCAAGCATTCTCCAAAACAGGG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCCTGGGTCTTCCAAATaGTTAGCACACAGTAAATGC +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYPGSSK*LAHSKC
Trigger: GCATTTACTGTGTGCTAAGCATTTGGAAGACCCAGG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTCACCCAGGCTGGAGTaGAGTAGCATGATCATGGCT +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVSPRLE*SSMIMA
Trigger: AGCCATGATCATGCTACTGCACTCCAGCCTGGGTGA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCTCATGAACCATCAGTaGCTCCCACGTCCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVLMNHQ*LPRPLG
Trigger: TCCAAGAGGACGTGGGAGCCACTGATGGTTCATGAG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTGACACCTCACCTATCTaGAATTCAGCTATCCAGCGC +
Preference number: 2 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVDTSPI*NSAIQR
Trigger: GCGCTGGATAGCTGAATTCCAGATAGGTGAGGTGTC...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CAA 90 bp TCAGAGAAACACACAAGTAACCTTTTGTCTGCCTATCAGCCAGTGTaGAAACAGCTTTGGAATTCACATGGAAGGCTGCCGGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: SEKHTSNLLSAYQPV*KQLWNSHGRLPGWF
Trigger: GAACCAGCCCGGCAGCCTTCCATGTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGCAGACAAAAGGTTACTTGTGTGTTTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCTATGTTGCCCAGGCTaGTATAAAACTCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVLCCPG*YKTPGL
Trigger: GAGCCCAGGAGTTTTATATCAGCCTGGGCAACATAG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATTCAAGACCCTCCATaGTTCGGCCTCCACTGCTTA +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVIQDPP*FGLHCL
Trigger: TAAGCAGTGGAGGCCGAATCATGGAGGGTCTTGAAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGTGGCACTGTCCCCATaGTCTGAAGCAGACATGAAA +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVVALSP*SEADMK
Trigger: TTTCATGTCTGCTTCAGATCATGGGGACAGTGCCAC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACATTGGATGGAGAAATaGCACAGATCCTATGGGGAG +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGHWMEK*HRSYGE
Trigger: CTCCCCATAGGATCTGTGGCATTTCTCCATCCAATG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTCCTTTTCAATCAGTaGTGGTCCTGCCCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLLFNQ*WSCPSL
Trigger: AAGAGAAGGGCAGGACCAGCACTGATTGAAAAGGAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTAGGTGCCTCAGCCATTaGCTACCCTTTTGCACAAAA +
Preference number: 2 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVRCLSH*LPFCTK
Trigger: TTTTGTGCAAAAGGGTAGGCAATGGCTGAGGCACCT...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAAGGGCACAGATGACTaGAAGGCAGATGTACATTTC +
Preference number: 2 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYKGTDD*KADVHF
Trigger: GAAATGTACATCTGCCTTCCAGTCATCTGTGCCCTT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGCAACAGCCCTGTTTTaGAGAATGCTTGCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVATALF*RMLASP
Trigger: GGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTAAGGAGACCGAGGTGTaGTATTTAACATTGCTTGCA +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTKETEV*YLTLLA
Trigger: TGCAAGCAATGTTAAATATCACACCTCGGTCTCCTT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTTGCTGTGATGGCAACTaGAGTTTAAACCCAAGTTTG +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTCCDGN*SLNPSL
Trigger: CAAACTTGGGTTTAAACTTCAGTTGCCATCACAGCA...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGGCATGCACATGAGGTaGAGGAAGACGAGATTTAGA +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVGMHMR*RKTRFR
Trigger: TCTAAATCTCGTCTTCCTCCACCTCATGTGCATGCC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAACAGTGTCTGCAGTTaGGGTGCAGGAATCTGCATT +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMNSVCS*GAGICI
Trigger: AATGCAGATTCCTGCACCCCAACTGCAGACACTGTT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 90 bp AGAGAGTCTCTATTGACTTCAAGGAAATTAACCAGTAACTCAAGCTaGGCTTGTGGCTCTGTAATGGAGAGACGGAGGACAGGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: RESLLTSRKLTSNSS*ACGSVMERRRTGEE
Trigger: CTCTTCACCTGTCCTCCGTCTCTCCATTACAGAGCCACAAGCCAAGCTTGAGTTACTGGTTAATTTCCTTGAAGTCAATAGAGACTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGCCTTTCGCTGGATTTaGGAATTAACAGCAGACTCT +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVAFRWI*ELTADS
Trigger: AGAGTCTGCTGTTAATTCTCAAATCCAGCGAAAGGC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATTCTTCCTCCACACTaGACAAGCCCTCCTTTTCAA +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVILPPH*TSPPFQ
Trigger: TTGAAAAGGAGGGCTTGTTCAGTGTGGAGGAAGAAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCTCTCCCAGACATATATaGATGGGGATGAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFSPRHI*MGMRTQ
Trigger: CTGGGTCCTCATCCCCATGCATATATGTCTGGGAGA...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTTGGGGTGCAGGAATCTaGATTTTACATATGCTTCTA +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTWGAGI*ILHMLL
Trigger: TAGAAGCATATGTAAAATGCAGATTCCTGCACCCCA...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTGTCTGCAGTTGGGGTaGAGGAATCTGCATTTTACA +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMCLQLG*RNLHFT
Trigger: TGTAAAATGCAGATTCCTGCACCCCAACTGCAGACA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCTAAGTAGTATTCATTaGATGGAGAAATGCCACAGA +
Preference number: 2 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLSSIH*MEKCHR
Trigger: TCTGTGGCATTTCTCCATCCAATGAATACTACTTAG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTGACGCAATACAGAAGTaGTTATCACAGACAACAGAT +
Preference number: 2 (lower is better)
Translates to: GESALPSLPSVQLHTAKTDAIQK*LSQTTD
Trigger: ATCTGTTGTCTGTGATAACCACTTCTGTATTGCGTC...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTACTGTCCCCATGATCTaGAGCAGACATGAAATTACA +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVTVPMI*SRHEIT
Trigger: TGTAATTTCATGTCTGCTTCAGATCATGGGGACAGT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGCGTTTAAAAAGTTCATaGACCAAAGCTCATGCACTT +
Preference number: 2 (lower is better)
Translates to: FTVQNTYNRKCPDKPLQGRLKSS*TKAHAL
Trigger: AAGTGCATGAGCTTTGGTGCATGAACTTTTTAAACG...CCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATCTTATTTTGTAGCCTaGGTCTTCCAAATGCTTAGC +
Preference number: 2 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGSYFVA*VFQMLS
Trigger: GCTAAGCATTTGGAAGACCCAGGCTACAAAATAAGA...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCAACCCTCATCATTTaGAATTTCCAAGACCAAGAT +
Preference number: 2 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPTLII*NFQDQD
Trigger: ATCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTGAGTGCTATCACAGATaGGGCATCAGGAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFECYHR*GIRSVR
Trigger: CCTGACACTCCTGATGCCGCATCTGTGATAGCACTC...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTCTAGGGGATCCTTATaGCCATTAAAGTTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMSRGSL*PLKFAN
Trigger: GTTTGCAAACTTTAATGGGCATAAGGATCCCCTAGA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTGGGGTGCAGGAATCTaGATTTTACATATGCTTCTA +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMWGAGI*ILHMLL
Trigger: TAGAAGCATATGTAAAATGCAGATTCCTGCACCCCA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTCTCCCAGACATATATaGATGGGGATGAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFSPRHI*MGMRTQ
Trigger: CTGGGTCCTCATCCCCATGCATATATGTCTGGGAGA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp GGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCAGCTATAAAATTATATaGAGTTCTAGCCAGGTACAG +
Preference number: 2 (lower is better)
Translates to: GGRAHSRKVGRKMHILATSYKII*SSSQVQ
Trigger: CTGTACCTGGCTAGAACTGCATATAATTTTATAGCT...GGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCTCAAGCTTGGCTTGTaGCTCTGTAATGGAGAGACG +
Preference number: 2 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFLKLGL*LCNGET
Trigger: CGTCTCTCCATTACAGAGCCACAAGCCAAGCTTGAG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCTAAGTAGTATTCATTaGATGGAGAAATGCCACAGA +
Preference number: 2 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLSSIH*MEKCHR
Trigger: TCTGTGGCATTTCTCCATCCAATGAATACTACTTAG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 90 bp AATGGTCACCAGCAACCTACAGAGTTTAGGTCAGCAAATCTGAGGTaGGTCCAATGTCTTAACTTTTCTAATCCGAATTCCTTTAGGCTA +
Preference number: 2 (lower is better)
Translates to: NGHQQPTEFRSANLR*VQCLNFSNPNSFRL
Trigger: TAGCCTAAAGGAATTCGGATTAGAAAAGTTAAGACATTGGACCAACCTCAGATTTGCTGACCTAAACTCTGTAGGTTGCTGGTGACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCTCTAGGGGATCCTTATaGCCATTAAAGTTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFSRGSL*PLKFAN
Trigger: GTTTGCAAACTTTAATGGGCATAAGGATCCCCTAGA...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTGGATACAGCATCCTTTaGTCACTGTCAGAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFGYSIL*SLSEEA
Trigger: AGCTTCCTCTGACAGTGACCAAAGGATGCTGTATCC...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR GCA 90 bp TTGTCTATGTTTAGTCAGGCTAGCAGAGTAGTCCTGTTTGTGTTCTTTTATTTATCTTCCCATTCCACCTaGTTGTGTCCTGATCCATCA +
Preference number: 2 (lower is better)
Translates to: LSMFSQASRVVLFVFFYLSSHST*LCPDPS
Trigger: TGATGGATCAGGACACAAGCAGGTGGAATGGGAAGA...TAAATAAAAGAACACAAACAGGACTACTCTGCTAGCCTGACTAAACATAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR GCA 90 bp GCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGAACATATTAGCCACCTGTaGACATCTCATTTAACCCCC +
Preference number: 2 (lower is better)
Translates to: AYDFIYEGVQKGKSTGTEHISHL*TSHLTP
Trigger: GGGGGTTAAATGAGATGTGCACAGGTGGCTAATATG...TTCTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR CAA 90 bp TTCCAAGACCAAGATAACGCATCCTTTCCCAGAGACAAAGGCTTTTaGAGATCATCATCCATAGAGTTCTCAGTTAGAAACAAAATGAGA +
Preference number: 2 (lower is better)
Translates to: FQDQDNASFPRDKGF*RSSSIEFSVRNKMR
Trigger: TCTCATTTTGTTTCTAACTGAGAACTCTATGGATGATGATCTCAAAAAGCCTTTGTCTCTGGGAAAGGATGCGTTATCTTGGTCTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp ACTCAAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTaGCACCAGCCTGCTCCTCCGCCTCTGTCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: TQEQRGSRLHQP*HQPAPPPLSAS
Trigger: AGAAGCAGACAGAGGCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR CCA 72 bp GGCCCACGACCGCACTTCACACCCATCAGAGATTCCTaGGTATTTGTGCCTCCCTCTGCTGGCCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: GPRPHFTPIRDS*VFVPPSAGLEG
Trigger: GCCCTCCAGGCCAGCAGAGGGAGGCACAAATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp ATGGAAGGCTGCCGGGCTGGTTCCCCAACACTAGCCTaGTGGAGTCCTGTATCCGCACCGTGCCGTCAAACT +
Preference number: 3 (lower is better)
Translates to: MEGCRAGSPTLA*WSPVSAPCRQT
Trigger: AGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGTGTTGGGGAACCAGCCCGGCAGCCTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGAGCAACAGCCCTGTTTaGGAGAATGCTTGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVSNSPV*ENACFS
Trigger: GGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGCT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp AGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTaGAGGCAACACGAGTGCTATCACAGATGCGGCATC +
Preference number: 3 (lower is better)
Translates to: RTFHPGLAQPAM*RQHECYHRCGI
Trigger: GATGCCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp TTTGGGCTCAGGGTCCGACCTTTAGCAGGGTCTCCATaGCGGTCATTTTCTGTGGCCCACGACCGCACTTCA +
Preference number: 3 (lower is better)
Translates to: FGLRVRPLAGSP*RSFSVAHDRTS
Trigger: TGAAGTGCGGTCGTGGGCCACAGAAAATGACCGTCATGGAGACCCTGCTAAAGGTCGGACCCTGAGCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp CCTCCGCAGGTCCCACCACTCCCTGCTGGGCAGTATTaGGCTGATTCACATGCTTATGTTACTGTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: PPQVPPLPAGQY*ADSHAYVTVRA
Trigger: AGCCCTGACAGTAACATAAGCATGTGAATCAGCCCAATACTGCCCAGCAGGGAGTGGTGGGACCTGCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAAGGATACAGCATCCTTaGGTCACTGTCAGAGGAAGC +
Preference number: 3 (lower is better)
Translates to: STQGWPSLPCEGNTSAITRIQHP*VTVRGS
Trigger: GCTTCCTCTGACAGTGACCAAAGGATGCTGTATCCT...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp GCAGGTCCCACCACTCCCTGCTGGGCAGTATTGGGCTaGTTCACATGCTTATGTTACTGTCAGGGCTTACAG +
Preference number: 3 (lower is better)
Translates to: AGPTTPCWAVLG*FTCLCYCQGLQ
Trigger: CTGTAAGCCCTGACAGTAACATAAGCATGTGAATCAGCCCAATACTGCCCAGCAGGGAGTGGTGGGACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR GCA 72 bp ACCAGCCCAAGACAGATGATGGCTCCACACCCACTGTaGTTCCTGACTACTCAAGTGACCTACGTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: TSPRQMMAPHPL*FLTTQVTYVWL
Trigger: AAGCCACACGTAGGTCACTTGAGTAGTCAGGAAGCACAGTGGGTGTGGAGCCATCATCTGTCTTGGGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp GAATCACTGGTGGTACCAGTTAAGAATGCAGACCCGTaGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: ESLVVPVKNADP*APLQSHLTVSA
Trigger: TGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGCATTCTTAACTGGTACCACCAGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp GAAGGAATCCCAGTTACAAGTGAGGATGAGAGGCCTTaGGAGGTCACACAGCAGGAAGGTGGTAGAGTTGGG +
Preference number: 3 (lower is better)
Translates to: EGIPVTSEDERP*EVTQQEGGRVG
Trigger: CCCAACTCTACCACCTTCCTGCTGTGTGACCTCCCAAGGCCTCTCATCCTCACTTGTAACTGGGATTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CAA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGTGTTTTGGAGAATGCTaGCTTCTCCCAGACATATAT +
Preference number: 3 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVCFGEC*LLPDIY
Trigger: ATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACA...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp GGAAACCCTGTCTTCGGTGACAGGTATCTATTTGGTTaGTGGCTTGTGGCGGTGGTAGGGCACACAGTAGGA +
Preference number: 3 (lower is better)
Translates to: GNPVFGDRYLFG*WLVAVVGHTVG
Trigger: TCCTACTGTGTGCCCTACCACCGCCACAAGCCATCAACCAAATAGATACCTGTCACCGAAGACAGGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR GCA 72 bp GATACCCATCCTAAGGGAAAGGGGCCCACTGCCCATTaGCGCCTTAGGCAGTTAAGACCACACAATACAGAA +
Preference number: 3 (lower is better)
Translates to: DTHPKGKGPTAH*RLRQLRPHNTE
Trigger: TTCTGTATTGTGTGGTCTTAACTGCCTAAGGCGGCAATGGGCAGTGGGCCCCTTTCCCTTAGGATGGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 72 bp AGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTaGAAGGGCAGGGTCTCCCTGATTCAACAGCTGACT +
Preference number: 3 (lower is better)
Translates to: RTPTIGSVLTSH*KGRVSLIQQLT
Trigger: AGTCAGCTGTTGAATCAGGGAGACCCTGCCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CCA 72 bp CTTTCCAAATCCCCCTGGGCTAATCCAGGCAGAGGCTaGATTCTATCCCGTCCACCTGGAATAATGCTTCCA +
Preference number: 3 (lower is better)
Translates to: LSKSPWANPGRG*ILSRPPGIMLP
Trigger: TGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGGATTAGCCCAGGGGGATTTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp AATCTCGGGATTGAAGCATCGCATCAGAATCACTGGTaGTACCAGTTAAGAATGCAGACCCGTGGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: NLGIEASHQNHW*YQLRMQTRGPH
Trigger: GTGGGGCCCACGGGTCTGCATTCTTAACTGGTACCACCAGTGATTCTGATGCGATGCTTCAATCCCGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp GTACCCCTTCCCCATCTTAACAGCCAGTGCTGCGTATaGCCATCAGCAGACAGTCCATTTATACCACTGGAC +
Preference number: 3 (lower is better)
Translates to: VPLPHLNSQCCV*PSADSPFIPLD
Trigger: GTCCAGTGGTATAAATGGACTGTCTGCTGATGGCCATACGCAGCACTGGCTGTTAAGATGGGGAAGGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp TGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTaGTTTCCACTAGAAAAGCAATGGAGAGTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: WSPVSAPCRQTG*FPLEKQWRVSS
Trigger: AGAGCTGACTCTCCATTGCTTTTCTAGTGGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp CTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTaGCTGGTTTCCACTAGAAAAGCAATGGAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: LMESCIRTVPSN*LVSTRKAMESQ
Trigger: CTGACTCTCCATTGCTTTTCTAGTGGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTCTTCTGAATACCCCTTaGGGCTCAGGGTCCGACCTT +
Preference number: 3 (lower is better)
Translates to: GESALPSLPSVQLHTAKTLLNTP*GSGSDL
Trigger: AAGGTCGGACCCTGAGCCCAAAGGGGTATTCAGAAG...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp TTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGAGCTGCAGAGTGGCCTaGTCTGCTGCTGATGTTCTG +
Preference number: 3 (lower is better)
Translates to: FTVQNTYNRKCPDKPLQGSCRVA*SAADVL
Trigger: CAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCT...CCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CAA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCCCAACCCTCATCATTaGAAATTTCCAAGACCAAGA +
Preference number: 3 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSPNPHH*KFPRPR
Trigger: TCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGGG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp CTTGCAGGCTCGGAGAAGGTAACTTATTCCCCCTTCTaGTTCTTCCTCCACACTGAACAAGCCCTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: LAGSEKVTYSPF*FFLHTEQALLF
Trigger: GAAAAGGAGGGCTTGTTCAGTGTGGAGGAAGAATCAGAAGGGGGAATAAGTTACCTTCTCCGAGCCTGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp GGCCTCAGCAGCAGTTCCTGGGTGGCACTGTCCCCATaGTCTGAAGCAGACATGAAATTACAATACGCTTTT +
Preference number: 3 (lower is better)
Translates to: GLSSSSWVALSP*SEADMKLQYAF
Trigger: AAAAGCGTATTGTAATTTCATGTCTGCTTCAGATCATGGGGACAGTGCCACCCAGGAACTGCTGCTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 72 bp TTCCTCCACACTGAACAAGCCCTCCTTTTCAATCAGTaGTGGTCCTGCCCTTCTCTTCCTCATGAACCATCA +
Preference number: 3 (lower is better)
Translates to: FLHTEQALLFNQ*WSCPSLPHEPS
Trigger: TGATGGTTCATGAGGAAGAGAAGGGCAGGACCAGCACTGATTGAAAAGGAGGGCTTGTTCAGTGTGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp GGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTaGGGTGCAGGAATCTGCATTTTACATATGCTTCTA +
Preference number: 3 (lower is better)
Translates to: GPTPVPLNSVCS*GAGICILHMLL
Trigger: TAGAAGCATATGTAAAATGCAGATTCCTGCACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp GATGTTCAGCTAGACCCACGGGGCTTTAACCTTACCTaGCATGGCATCCATGGAAATATAGGGCTCAAATGG +
Preference number: 3 (lower is better)
Translates to: DVQLDPRGFNLT*HGIHGNIGLKW
Trigger: CCATTTGAGCCCTATATTTCCATGGATGCCATGCCAGGTAAGGTTAAAGCCCCGTGGGTCTAGCTGAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CCA 72 bp CATACTTGCACACACAGAGTTGACACCTCACCTATCTaGAATTCAGCTATCCAGCGCCCTCATCTATCCGGA +
Preference number: 3 (lower is better)
Translates to: HTCTHRVDTSPI*NSAIQRPHLSG
Trigger: TCCGGATAGATGAGGGCGCTGGATAGCTGAATTCCAGATAGGTGAGGTGTCAACTCTGTGTGTGCAAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CAA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTACCAGTAACTCAAGCTaGGCTTGTGGCTCTGTAATG +
Preference number: 3 (lower is better)
Translates to: GESALPSLPSVQLHTAKTTSNSS*ACGSVM
Trigger: CATTACAGAGCCACAAGCCAAGCTTGAGTTACTGGT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp TGCAACATTCAAGAGGGCTTGGGGACGTCAGAGCCATaGGTAACAATAACGAACCAGGGCTATGAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: CNIQEGLGTSEP*VTITNQGYEWN
Trigger: ATTCCACTCATAGCCCTGGTTCGTTATTGTTACTCATGGCTCTGACGTCCCCAAGCCCTCTTGAATGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 72 bp AATCCTGATGTACCCCTTCCCCATCTTAACAGCCAGTaGTGCGTATGGCCATCAGCAGACAGTCCATTTATA +
Preference number: 3 (lower is better)
Translates to: NPDVPLPHLNSQ*CVWPSADSPFI
Trigger: TATAAATGGACTGTCTGCTGATGGCCATACGCAGCACTGGCTGTTAAGATGGGGAAGGGGTACATCAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAGCCTTTCGCTGGATTaGAGAATTAACAGCAGACTC +
Preference number: 3 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYSLSLD*RINSRL
Trigger: GAGTCTGCTGTTAATTCTCAAATCCAGCGAAAGGCT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp AATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTATCAGCAAATCTGAGGTaGGTCCAATGTCTTAACTTT +
Preference number: 3 (lower is better)
Translates to: NCFCSTGKGQGLAESARLSANLR*VQCLNF
Trigger: AAAGTTAAGACATTGGACCAACCTCAGATTTGCTGA...TAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CAA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTCACATTGACATTGAGTaGCTATACTCAGGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVHIDIE*LYSGRL
Trigger: CAGCCTGCCTGAGTATAGCAACTCAATGTCAATGTG...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATAGAGACAAAGGCTTTTaGAGATCATCATCCATAGAG +
Preference number: 3 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYRDKGF*RSSSIE
Trigger: CTCTATGGATGATGATCTCAAAAAGCCTTTGTCTCT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAAACTTCCTAATTCCTTaGGTGGAGGAGGTGGACAAA +
Preference number: 3 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGNFLIP*VEEVDK
Trigger: TTTGTCCACCTCCTCCACCAAAGGAATTAGGAAGTT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTGTTTTGGAGAATGCTaGCTTCTCCCAGACATATAT +
Preference number: 3 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYCFGEC*LLPDIY
Trigger: ATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTTCCACTACTTAGCTTaGAGACTCATCTCCCACCAC +
Preference number: 3 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMFHYLA*RLISHH
Trigger: GTGGTGGGAGATGAGTCTCAAAGCTAAGTAGTGGAA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp ACACAAGTAACCTTTTGTCTGCCTATCAGCCAGTGTTaGAACAGCTTTGGAATTCACATGGAAGGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: TQVTFCLPISQC*NSFGIHMEGCR
Trigger: CCGGCAGCCTTCCATGTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGCAGACAAAAGGTTACTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp GATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTaGTGTTCTGTGAAATTGTTTCTGTTCCACAGGAAA +
Preference number: 3 (lower is better)
Translates to: DPSQLQSGLVCC*CSVKLFLFHRK
Trigger: TTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
3UTR GCA 72 bp TCAAAAGGAGACCGAGGTGTGATATTTAACATTGCTTaGAACATTCAAGAGGGCTTGGGGACGTCAGAGCCA +
Preference number: 3 (lower is better)
Translates to: SKGDRGVIFNIA*NIQEGLGTSEP
Trigger: TGGCTCTGACGTCCCCAAGCCCTCTTGAATGTTGCAAGCAATGTTAAATATCACACCTCGGTCTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCAGAGTAGATCCAATTaGAACATATCAAGCACATCT +
Preference number: 3 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYQSRSN*NISSTS
Trigger: AGATGTGCTTGATATGTTCAAATTGGATCTACTCTG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACCCAGAGAGTCTCTATaGACTTCAAGGAAATTAACC +
Preference number: 3 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGPRESL*TSRKLT
Trigger: GGTTAATTTCCTTGAAGTCAATAGAGACTCTCTGGG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAATGATCACCCGGGTTaGACACATCTAAATAGCCTC +
Preference number: 3 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMNDHPG*THLNSL
Trigger: GAGGCTATTTAGATGTGTCAAACCCGGGTGATCATT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GCTGGCTACAGCAAGAAGGACAGACAACAGCTTAATAACGAGAGAGGAGGAACTCAGCACAGCAGTTGGTaGTCTCTTTTTAAACAGGAA +
Preference number: 3 (lower is better)
Translates to: AGYSKKDRQQLNNERGGTQHSSW*SLFKQE
Trigger: TTCCTGTTTAAAAAGAGACAACCAACTGCTGTGCTG...AGTTCCTCCTCTCTCGTTATTAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR TCA 72 bp GAATGCTTGCTTCTCCCAGACATATATGCATGGGGATaGGGACCCAGAGAGTCTCTATTGACTTCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: ECLLLPDIYAWG*GPRESLLTSRK
Trigger: TTTCCTTGAAGTCAATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp TTAGGTACCTGGGCTGCTCAAAAGGAGACCGAGGTGTaGTATTTAACATTGCTTGCAACATTCAAGAGGGCT +
Preference number: 3 (lower is better)
Translates to: LGTWAAQKETEV*YLTLLATFKRA
Trigger: AGCCCTCTTGAATGTTGCAAGCAATGTTAAATATCACACCTCGGTCTCCTTTTGAGCAGCCCAGGTACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCCCAACCCTCATCATTaGAAATTTCCAAGACCAAGA +
Preference number: 3 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMPNPHH*KFPRPR
Trigger: TCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGGG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp GCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGAAACTCCCTTCCGTGACTaGGATGTTCTCATAGGCCCC +
Preference number: 3 (lower is better)
Translates to: AYDFIYEGVQKGKSTGTETPFRD*DVLIGP
Trigger: GGGGCCTATGAGAACATCCAAGTCACGGAAGGGAGT...TTCTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR TCA 72 bp CCTGGGTGGCACTGTCCCCATGATCTGAAGCAGACATaGAATTACAATACGCTTTTATTCACTCATCTCAAG +
Preference number: 3 (lower is better)
Translates to: PGWHCPHDLKQT*NYNTLLFTHLK
Trigger: CTTGAGATGAGTGAATAAAAGCGTATTGTAATTTCATGTCTGCTTCAGATCATGGGGACAGTGCCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CCA 72 bp AGGGAAGTGGTGAGTGTAGCTCTAAGTAGTATTCATTaGATGGAGAAATGCCACAGATCCTATGGGGAGTAT +
Preference number: 3 (lower is better)
Translates to: REVVSVALSSIH*MEKCHRSYGEY
Trigger: ATACTCCCCATAGGATCTGTGGCATTTCTCCATCCAATGAATACTACTTAGAGCTACACTCACCACTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAGAGACAAAGGCTTTTaGAGATCATCATCCATAGAG +
Preference number: 3 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMRDKGF*RSSSIE
Trigger: CTCTATGGATGATGATCTCAAAAAGCCTTTGTCTCT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGATACAAATCTTAGATTaGCCACCCATCTATGAGTGG +
Preference number: 3 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMIQILD*PPIYEW
Trigger: CCACTCATAGATGGGTGGCAAATCTAAGATTTGTAT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp AAATTCTTAGGCTTTCCAGATGTGAAATCTCGGGATTaGAGCATCGCATCAGAATCACTGGTGGTACCAGTT +
Preference number: 3 (lower is better)
Translates to: KFLGFPDVKSRD*SIASESLVVPV
Trigger: AACTGGTACCACCAGTGATTCTGATGCGATGCTTCAATCCCGAGATTTCACATCTGGAAAGCCTAAGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp GTCACCAGCAACCTACAGAGTTTAGGTCAGCAAATCTaGGGTTGGTCCAATGTCTTAACTTTTCTAATCCGA +
Preference number: 3 (lower is better)
Translates to: VTSNLQSLGQQI*GWSNVLTFLIR
Trigger: TCGGATTAGAAAAGTTAAGACATTGGACCAACCTCAGATTTGCTGACCTAAACTCTGTAGGTTGCTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CCA 72 bp GAGAACAGTCACACGATAAAGGCACAGCACAGCAGTTaGTTGTCTCTTTTTAAACAGGAAGTAGCAGTCATT +
Preference number: 3 (lower is better)
Translates to: ENSHTIKAQHSS*LSLFKQEVAVI
Trigger: AATGACTGCTACTTCCTGTTTAAAAAGAGACAACCAACTGCTGTGCTGTGCCTTTATCGTGTGACTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR TCA 72 bp AACATATCAAGCACATCTTCCCTAGAAGGGCACAGATaGCTGGAAGGCAGATGTACATTTCTGAAAACACAA +
Preference number: 3 (lower is better)
Translates to: NISSTSSLEGHR*LEGRCTFLKTQ
Trigger: TTGTGTTTTCAGAAATGTACATCTGCCTTCCAGTCATCTGTGCCCTTCTAGGGAAGATGTGCTTGATATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR TCA 72 bp TGCATGTTCTACCTGCCACCAGGTCAAACAAGTGTGTaGAACTTCCAAAGGTTTTTAAAGCAAAAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: CMFYLPPGQTSV*NFQRFLKQKGS
Trigger: ACTTCCCTTTTGCTTTAAAAACCTTTGGAAGTTTCACACACTTGTTTGACCTGGTGGCAGGTAGAACATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR TCA 72 bp ATGCTTTATACAAATCTTAGATTTGCCACCCATCTATaGGTGGGGCCAAAATCATCTCCACTTCTGAATACC +
Preference number: 3 (lower is better)
Translates to: MLYTNLRFATHL*VGPKSSPLLNT
Trigger: GGTATTCAGAAGTGGAGATGATTTTGGCCCCACTCATAGATGGGTGGCAAATCTAAGATTTGTATAAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR GCA 72 bp AGTGTAGCTCTAAGTAGTATTCATTGGATGGAGAAATaGCACAGATCCTATGGGGAGTATTTAACCTTCCAA +
Preference number: 3 (lower is better)
Translates to: SVALSSIHWMEK*HRSYGEYLTFQ
Trigger: TTGGAAGGTTAAATACTCCCCATAGGATCTGTGGCATTTCTCCATCCAATGAATACTACTTAGAGCTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTGACACCAGCCTGCTCCTCCGCAGGCTTCACCAGCCCTaGCACCAGCCTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: KSSAVAGFTSPDTSLLLRRLHQP*HQPAPP
Trigger: CGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCT...GCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp AAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTGACACCAGCCTGCTCCTCCGCAGGCCCGGGGATCCTTaGAGCCTGCCAGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: KSSAVAGFTSPDTSLLLRRPGDP*SLPGGC
Trigger: ACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCT...GCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGGAGGGGCACGATGAGTaGCAGCGGCGCGAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGEGHDE*QRREGV
Trigger: TACGCCTTCGCGCCGCTGTCACTCATCGTGCCCCTC...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp AGCGCGGTAGCAGGCTTCACCAGCCCTGACACCAGCCTGCTCCTCCGCCTCTGTGGGATCCGTCCATGGTaGTCTAGTGGCGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: SAVAGFTSPDTSLLLRLCGIRPW*SSGASH
Trigger: GTGGGATGCGCCACTAGACCACCATGGACGGATCCC...ACAGAGGCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGTCCCAGCCACGGCCTTaGCTGTCACCACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGSQPRP*LSPLSW
Trigger: CCATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGA...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGGGGATCCGTCCATGGTaGTCTAGTGGCGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGGIRPW*SSGASH
Trigger: GTGGGATGCGCCACTAGACCACCATGGACGGATCCC...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCGCTGGAGCTACTTGTaGGAGGCAGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGRWSYL*EAAAAA
Trigger: AGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCG...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGGCCAAGGCCTGGCTaGGAGTGCCAGGCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGGPRPG*ECQASS
Trigger: GGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCC...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGCTGCAGCTTCAGGGCTaGGCTGTGGGATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVLQLQG*AVGSVH
Trigger: ATGGACGGATCCCACAGCGCAGCCCTGAAGCTGCAG...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGAGGCCCGGGGATCCTTaGAGCCTGCCAGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRRPGDP*SLPGGC
Trigger: ACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGAAGAATGCAGACCCGTaGGCCCCACTCCAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVKNADP*APLQSH
Trigger: GTGGGACTGGAGTGGGGCCCACGGGTCTGCATTCTT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCTTGTGGGAGGCAGCTaGTGCAGCTTCAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRLVGGS*CSFRAA
Trigger: CGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCCTGCCAGGCGGATGTaGCAGTACTTCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGPARRM*QYFWRL
Trigger: TAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGG...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCAGGCCCGGGGATCCTTaGAGCCTGCCAGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPRPGDP*SLPGGC
Trigger: ACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCT...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGCTCCCTCTGCTGGCCTaGAGGGCAGGAACTATGTCT +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVLPLLA*RAGTMS
Trigger: AGACATAGTTCCTGCCCTCCAGGCCAGCAGAGGGAG...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGCAGCAGTTCCTGGGTaGCACTGTCCCCATGATCTG +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVAAVPG*HCPHDL
Trigger: CAGATCATGGGGACAGTGCCACCCAGGAACTGCTGC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGTCACGAGGTGCCTGGTaGCATTCTCGCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVSRGAW*HSRLSS
Trigger: AGATGACAGGCGAGAATGTCACCAGGCACCTCGTGA...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGTCCCAGCCACGGCCTTaGCTGTCACCACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRSQPRP*LSPLSW
Trigger: CCATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGA...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGCGCCCAAGAATGCAATaGGGCACCCCAGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVRPRMQ*GTPVQT
Trigger: TGTTTGCACTGGGGTGCCTCATTGCATTCTTGGGCG...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCATGCTGACCACGAGGTaGCCGAAGATCGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QGLAESARLVPGGQGLFLMLTTR*PKIAKR
Trigger: CCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCAT...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGGGATCCTTGGAGCCTaGCAGGCGGATGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITGILGA*QADVAV
Trigger: TACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGGGATCCTTGGAGCCTaGCAGGCGGATGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRGILGA*QADVAV
Trigger: TACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGGCCAGCTCACGAGGTaGCTGGTGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITGQLTR*LVTFSP
Trigger: AGGCGAGAATGTCACCAGGCACCTCGTGAGCTGGCC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGTCCTGACAAGCCACTaGAAGGGCAGGGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGVLTSH*KGRVSL
Trigger: CAGGGAGACCCTGCCCTTGCAGTGGCTTGTCAGGAC...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCTGTGGGATCCGTCCATaGTGGTCTAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: QGLAESARLVPGGQGLFLCGIRP*WSSGAS
Trigger: GGATGCGCCACTAGACCACCATGGACGGATCCCACA...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGATTCAGGGCTGCGCTGTaGGATCCGTCCATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGFRAAL*DPSMVV
Trigger: GACCACCATGGACGGATCCCACAGCGCAGCCCTGAA...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPRLRR*SYLWEA
Trigger: TGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTGACACCAGCCTGCTCCTCCGCTCTTCTCGTGACTGTTaGGTGCGAATGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: KSSAVAGFTSPDTSLLLRSSRDC*VRMSPA
Trigger: TGCTGGTGACATTCGCACCCAACAGTCACGAGAAGA...GCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCGGAAGGCTGCCGGGCTaGTTCCCCAACACTAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPGRLPG*FPNTSL
Trigger: CAGGCTAGTGTTGGGGAACCAGCCCGGCAGCCTTCC...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGCCTGTCATCTTCTCGTaGCTGTTGGGTGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVPVIFS*LLGANV
Trigger: GACATTCGCACCCAACAGTCACGAGAAGATGACAGG...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGTCACGAGGTGCCTGGTaGCATTCTCGCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVSRGAW*HSRLSS
Trigger: AGATGACAGGCGAGAATGTCACCAGGCACCTCGTGA...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTGACACCAGCCTGCTCCTCCGCGCAAGCAGAACAGAATaGTCTCCACCAGCATGTACA +
Preference number: 4 (lower is better)
Translates to: KSSAVAGFTSPDTSLLLRASRTE*SPPACT
Trigger: TGTACATGCTGGTGGAGATCATTCTGTTCTGCTTGC...GCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGTGGAGTGCAGTAGCATaGTCATGGCTCACTGTAGCC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVWSAVA*SWLTVA
Trigger: GGCTACAGTGAGCCATGATCATGCTACTGCACTCCA...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACTCAGGTTGGTGGGATaGTGCCACTGCTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITLRLVG*CHCSKP
Trigger: GGGTTTGGAGCAGTGGCATCATCCCACCAACCTGAG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCTCAGGTTGGTGGGATaGTGCCACTGCTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRLRLVG*CHCSKP
Trigger: GGGTTTGGAGCAGTGGCATCATCCCACCAACCTGAG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCTTGTGGGAGGCAGCTaGTGCAGCTTCAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: CFCSTGKGQGLAESARLVLVGGS*CSFRAA
Trigger: CGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAG...AACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp TCCACCTGCTTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCGGGATCCTTGGAGCCTaGCAGGCGGATGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: STCLCPDPSQLQSGLVCCGILGA*QADVAV
Trigger: TACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCC...GCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAAGCAGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCGGCGGTTGCCACCATaGACACGAACATCACGTAGA +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVRRLPP*TRTSRR
Trigger: TCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCG...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTGCAAACATGCAGATGTaGAGCACGTCCTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: STGKGQGLAESARLVPGGANMQM*STSSPM
Trigger: CATCGGGGAGGACGTGCTGCACATCTGCATGTTTGC...ACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGAATGAGGCACCCCAGTaGAAACATGCAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGNEAPQ*KHADVQ
Trigger: CTGCACATCTGCATGTTTGCACTGGGGTGCCTCATT...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGGGCCCACTGCCCATTaGCGCCTTAGGCAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRGPTAH*RLRQLR
Trigger: TCTTAACTGCCTAAGGCGGCAATGGGCAGTGGGCCC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCTTCAGGGCTGCGCTGTaGGATCCGTCCATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSFRAAL*DPSMVV
Trigger: GACCACCATGGACGGATCCCACAGCGCAGCCCTGAA...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCCCAGAGGCACTTCTaGAGCCGTGCTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPQRHF*SRALLA
Trigger: TGCAAGAAGAGCACGGCTCCAGAAGTGCCTCTGGGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGACGGTCATTTTCTGTaGCCCACGACCGCACTTCAC +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVDGHFL*PTTALH
Trigger: GTGAAGTGCGGTCGTGGGCCACAGAAAATGACCGTC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGCAGCAGTTCCTGGGTaGCACTGTCCCCATGATCTG +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITAAVPG*HCPHDL
Trigger: CAGATCATGGGGACAGTGCCACCCAGGAACTGCTGC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGCCACTGGACAAAGATTaGGAGGAACCAGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVPLDKD*EEPAQD
Trigger: GTCTTGGGCTGGTTCCTCCCAATCTTTGTCCAGTGG...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGGACACCTCACCTATCTaGAATTCAGCTATCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGDTSPI*NSAIQR
Trigger: GCGCTGGATAGCTGAATTCCAGATAGGTGAGGTGTC...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGTCTTCCTGTTACGCGTaGTTAAGAAGACGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGSSCYA*LRRRPR
Trigger: TCTTGGGCGTCTTCTTAATCACGCGTAACAGGAAGA...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCGCCCAGCCTGCCATGTaGAGGCAACACGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPAQPAM*RQHECY
Trigger: ATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGC...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGAGGCTGTCTCTGAAATaGGCATCCCCATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVRLSLK*ASPSFQ
Trigger: CTGGAAAGATGGGGATGCTCATTTCAGAGACAGCCT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCCAGCCCAAGACAGATaGTGGCTCCACACCCACTGT +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSPAQDR*WLHTHC
Trigger: ACAGTGGGTGTGGAGCCATCATCTGTCTTGGGCTGG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGGGACGTCAGAGCCATaGGTAACAATAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVGTSEP*VTITNQ
Trigger: CTGGTTCGTTATTGTTACTCATGGCTCTGACGTCCC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCGGGCCCACTGCCCATTaGCGCCTTAGGCAGTTAAGA +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPGPTAH*RLRQLR
Trigger: TCTTAACTGCCTAAGGCGGCAATGGGCAGTGGGCCC...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCATTTGTGCCTCCCTCTaGTGGCCTGGAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPICASL*WPGGQE
Trigger: TTCCTGCCCTCCAGGCCAGCAGAGGGAGGCACAAAT...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGTCACCCAGGCTGGAGTaGAGTAGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVSPRLE*SSMIMA
Trigger: AGCCATGATCATGCTACTGCACTCCAGCCTGGGTGA...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCTGTATCCGCACCGTaGCGTCAAACTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPVSAP*RQTGWF
Trigger: AAACCAGCCAGTTTGACGGCACGGTGCGGATACAGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCTGTGGGATCCGTCCATaGTGGTCTAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPCGIRP*WSSGAS
Trigger: GGATGCGCCACTAGACCACCATGGACGGATCCCACA...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCTGCCAGGCGGATGTaGCAGTACTTCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPARRM*QYFWRL
Trigger: TAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGTCTTCTCGTGACTGTTaGGTGCGAATGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVSSRDC*VRMSPA
Trigger: TGCTGGTGACATTCGCACCCAACAGTCACGAGAAGA...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGCAACAGCCCTGTTTTaGAGAATGCTTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVATALF*RMLASP
Trigger: GGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGTCCCACCACCTTCCCTaGCTTTCCTTTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVSHHLP*LSFLCP
Trigger: TGGGCAAAGAAAGGAAAGCCAGGGAAGGTGGTGGGA...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACATGGCTCAGGTTGGTaGGATGATGCCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITHGSGW*DDATAP
Trigger: TGGAGCAGTGGCATCATCCCACCAACCTGAGCCATG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGTTTCATGGCTCAGGTTaGTGGGATGATGCCACTGCT +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVFHGSG*WDDATA
Trigger: AGCAGTGGCATCATCCCACCAACCTGAGCCATGAAA...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGACCATGTCTTGGTCTTaGAATAGGCCCGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRTMSWS*NRPGDP
Trigger: AGGATCCCCGGGCCTATTTCAAGACCAAGACATGGT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGAGGGGCACGATGAGTaGCAGCGGCGCGAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYEGHDE*QRREGV
Trigger: TACGCCTTCGCGCCGCTGTCACTCATCGTGCCCCTC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGACCTGTCATCTTCTCGTaGCTGTTGGGTGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGPVIFS*LLGANV
Trigger: GACATTCGCACCCAACAGTCACGAGAAGATGACAGG...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCTGTCATCTTCTCGTaGCTGTTGGGTGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPVIFS*LLGANV
Trigger: GACATTCGCACCCAACAGTCACGAGAAGATGACAGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTAGCTGCAGGTTCCCTTaGATGGACAAGACAAGCATC +
Preference number: 4 (lower is better)
Translates to: STGKGQGLAESARLVPGGSCRFP*MDKTSI
Trigger: GATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCT...ACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACGC +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVGVVHL*GLTQKR
Trigger: GCGTTTTTGAGTCAAGCCTCACAGATGTACGACTCC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATCAGGCATGCACATaGGGTGGAGGAAGACGAGAT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITDQACT*GGGRRD
Trigger: ATCTCGTCTTCCTCCACCTCATGTGCATGCCTGATC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCCTCTGCCTCGGGGGTaGTCACCCTATTTTATATGC +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRPLPRG*SPYFIC
Trigger: GCATATAAAATAGGGTGATCACCCCCGAGGCAGAGG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCTCTGCCTCGGGGGTaGTCACCCTATTTTATATGC +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPLPRG*SPYFIC
Trigger: GCATATAAAATAGGGTGATCACCCCCGAGGCAGAGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGACTCGGACTCTTCGTaGAACCCGGAGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: NCFCSTGKGQGLAESARLDSDSS*NPEAQP
Trigger: AGGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTC...TAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp AATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGGGGCCCAGGCCAGATaGCATCTCTCCTTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NCFCSTGKGQGLAESARLGAQAR*HLSLWC
Trigger: ACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCC...TAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp AATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTACTGCAGCTTCAGGGCTaGGCTGTGGGATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: NCFCSTGKGQGLAESARLLQLQG*AVGSVH
Trigger: ATGGACGGATCCCACAGCGCAGCCCTGAAGCTGCAG...TAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCTTGTGGGAGGCAGCTaGTGCAGCTTCAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLVGGS*CSFRAA
Trigger: CGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACTCGTGACTGTTGGGTaGGAATGTCACCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITLVTVG*ECHQQV
Trigger: TACCTGCTGGTGACATTCGCACCCAACAGTCACGAG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCATTCCTGGGTATTTGTaGCTCCCTCTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSIPGYL*LPLLAW
Trigger: CCAGGCCAGCAGAGGGAGGCACAAATACCCAGGAAT...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCATTCCTGGGTATTTGTaGCTCCCTCTGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPIPGYL*LPLLAW
Trigger: CCAGGCCAGCAGAGGGAGGCACAAATACCCAGGAAT...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACTGTCACCACTGTCATaGAGCCAAGTAACGCCACCA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITLSPLS*SQVTPP
Trigger: TGGTGGCGTTACTTGGCTCCATGACAGTGGTGACAG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCTCTAGCAAGACTGCATaGGGCCCTGGGGGTTTTAGC +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSSSKTA*GPGGFS
Trigger: GCTAAAACCCCCAGGGCCCCATGCAGTCTTGCTAGA...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGACCGTGCCGTCAAACTaGCTGGTTTCCACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVTVPSN*LVSTRK
Trigger: TTTTCTAGTGGAAACCAGCCAGTTTGACGGCACGGT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTGCAAGCAGAACAGAATaGTCTCCACCAGCATGTACA +
Preference number: 4 (lower is better)
Translates to: STGKGQGLAESARLVPGGASRTE*SPPACT
Trigger: TGTACATGCTGGTGGAGATCATTCTGTTCTGCTTGC...ACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTCCCAGCCACGGCCTTaGCTGTCACCACTGTCATGG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYSQPRP*LSPLSW
Trigger: CCATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGCACGTCCTCCCCGATaGAGTCCAGGTAAAATATTG +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRARPPR*SPGKIL
Trigger: CAATATTTTACCTGGACTTCATCGGGGAGGACGTGC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGATCAGGCATGCACATaGGGTGGAGGAAGACGAGAT +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSDQACT*GGGRRD
Trigger: ATCTCGTCTTCCTCCACCTCATGTGCATGCCTGATC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGATTCAAGACCCTCCATaGTTCGGCCTCCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRIQDPP*FGLHCL
Trigger: TAAGCAGTGGAGGCCGAATCATGGAGGGTCTTGAAT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGGCTGCTGATGTTCTGTaGAATTGTTTCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GKGQGLAESARLVPGGQGAADVL*NCFCST
Trigger: TGTGGAACAGAAACAATTTCACAGAACATCAGCAGC...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCTTCACTCAGAGAAGTaGCAATTTCCGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRLHSEK*QFPWLS
Trigger: GGAGAGCCACGGAAATTGGCACTTCTCTGAGTGAAG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCTCGTGACTGTTGGGTaGGAATGTCACCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPLVTVG*ECHQQV
Trigger: TACCTGCTGGTGACATTCGCACCCAACAGTCACGAG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGTTATCGTGCATGTTCTaGATACCTGGCATGGCATCC +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVLSCMF*IPGMAS
Trigger: GGATGCCATGCCAGGTATGCAGAACATGCACGATAA...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGTCTCCCAGACATATATaGATGGGGATGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRSPRHI*MGMRTQ
Trigger: CTGGGTCCTCATCCCCATGCATATATGTCTGGGAGA...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGAAGACAGTCACATATaGGGCCAGGAAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVEDSHI*GQEESN
Trigger: GTTGCTTTCTTCCTGGCCGCATATGTGACTGTCTTC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATAAATGCTGGCCCCTCTaGCTCGGGGGTGATCACCCT +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYKCWPL*LGGDHP
Trigger: AGGGTGATCACCCCCGAGGCAGAGGGGCCAGCATTT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCTTAGCTCTGTGCCTTTaGAAATGCTGGCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSLALCL*KCWPLC
Trigger: GCAGAGGGGCCAGCATTTGCAAAGGCACAGAGCTAA...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGCTCCACACCCACTGTaGTTCCTGACTACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSAPHPL*FLTTQV
Trigger: CACTTGAGTAGTCAGGAAGCACAGTGGGTGTGGAGC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGAAGGGCACAGATGACTaGAAGGCAGATGTACATTTC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVKGTDD*KADVHF
Trigger: GAAATGTACATCTGCCTTCCAGTCATCTGTGCCCTT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACTCAAGCTTGGCTTGTaGCTCTGTAATGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITLKLGL*LCNGET
Trigger: CGTCTCTCCATTACAGAGCCACAAGCCAAGCTTGAG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGCAACAGCCCTGTTTTaGAGAATGCTTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITATALF*RMLASP
Trigger: GGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTGAGGATGAGAGGCCTTaGGAGGTCACACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CFCSTGKGQGLAESARLVEDERP*EVTQQE
Trigger: TTCCTGCTGTGTGACCTCCCAAGGCCTCTCATCCTC...AACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGCAAGCAGAACAGAATaGTCTCCACCAGCATGTACA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRASRTE*SPPACT
Trigger: TGTACATGCTGGTGGAGATCATTCTGTTCTGCTTGC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACCTGCTTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCAGCTGCAGGTTCCCTTaGATGGACAAGACAAGCATC +
Preference number: 4 (lower is better)
Translates to: STCLCPDPSQLQSGLVCCSCRFP*MDKTSI
Trigger: GATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCT...GCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAAGCAGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCAGCTGCAGGTTCCCTTaGATGGACAAGACAAGCATC +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSSCRFP*MDKTSI
Trigger: GATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCT...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGCAGGGTCCGCCCAAGAATGCAATaGGGCACCCCAGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: YRTPTIGSVLTSHCKGRVRPRMQ*GTPVQT
Trigger: TGTTTGCACTGGGGTGCCTCATTGCATTCTTGGGCG...GACCCTGCCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCTAGAAGGGCACAGATaGCTGGAAGGCAGATGTACA +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPLEGHR*LEGRCT
Trigger: TGTACATCTGCCTTCCAGTCATCTGTGCCCTTCTAG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGTTTGCCACCCATCTATaGGTGGGGCCAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRFATHL*VGPKSS
Trigger: AGATGATTTTGGCCCCACTCATAGATGGGTGGCAAA...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGGGCCAAGGCCTGGCTaGGAGTGCCAGGCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSGPRPG*ECQASS
Trigger: GGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCC...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp TCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTGGCCTTGTCTGCTGCTaGTGTTCTGTGAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: STGKGQGLAESARLVPGGGLVCC*CSVKLF
Trigger: AAACAATTTCACAGAACATCAGCAGCAGACAAGGCC...ACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGATTAGGCTTTCCAGAATaGTGCACTCCCTTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGLGFPE*CTPLWH
Trigger: ATGCCACAAGGGAGTGCATCATTCTGGAAAGCCTAA...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTGGGGCCCAGGCCAGATaGCATCTCTCCTTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTGAQAR*HLSLWC
Trigger: ACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCC...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATATGCTGACCACGAGGTaGCCGAAGATCGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYMLTTR*PKIAKR
Trigger: CCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCAT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GCAAGATGTGCTCAAAACCAACCGAGGTGCCTCAGCCATTGCCTACCCTTTTGCCGGCGGTTGCCACCATaGACACGAACATCACGTAGA +
Preference number: 4 (lower is better)
Translates to: ARCAQNQPRCLSHCLPFCRRLPP*TRTSRR
Trigger: TCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCG...GCAAAAGGGTAGGCAATGGCTGAGGCACCTCGGTTGGTTTTGAGCACATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGCAGACTCTCTGTCTTaGCTTAGCTCTGAAGGATAC +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRADSLS*LSSEGY
Trigger: GTATCCTTCAGAGCTAAGGCAAGACAGAGAGTCTGC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGAAGACAGTCACATATaGGGCCAGGAAGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMREDSHI*GQEESN
Trigger: GTTGCTTTCTTCCTGGCCGCATATGTGACTGTCTTC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCATTGGATGGAGAAATaGCACAGATCCTATGGGGAG +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRHWMEK*HRSYGE
Trigger: CTCCCCATAGGATCTGTGGCATTTCTCCATCCAATG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGATCTTCCCATTCCACCTaGTTGTGTCCTGATCCATCA +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGSSHST*LCPDPS
Trigger: TGATGGATCAGGACACAAGCAGGTGGAATGGGAAGA...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GGCAAGATGTGCTCAAAACCAACCGAGGTGCCTCAGCCATTGCCTACCCTTTTGCAAAACCAACCGAGGTaGCTCAGCCATTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: GKMCSKPTEVPQPLPTLLQNQPR*LSHCLP
Trigger: GGGTAGGCAATGGCTGAGGCACCTCGGTTGGTTTTG...CAAAAGGGTAGGCAATGGCTGAGGCACCTCGGTTGGTTTTGAGCACATCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGACTTCAAGGCTGTTTTaGCAGATTTACAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVTSRLF*QIYSLL
Trigger: GAGAAGGCTGTAAATCTGCCAAAACAGCCTTGAAGT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGGGATCCGTCCATGGTaGTCTAGTGGCGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYGIRPW*SSGASH
Trigger: GTGGGATGCGCCACTAGACCACCATGGACGGATCCC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATTTCAGGGCTGCGCTGTaGGATCCGTCCATGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDFRAAL*DPSMVV
Trigger: GACCACCATGGACGGATCCCACAGCGCAGCCCTGAA...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTAGGCCCGGGGATCCTTaGAGCCTGCCAGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVRPGDP*SLPGGC
Trigger: ACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCT...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAACATCACGTAGAAGATaGGGTAGTCAAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGTSRRR*GSQAAG
Trigger: ACCTGCAGCTTGACTACCCCATCTTCTACGTGATGT...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAACATCACGTAGAAGATaGGGTAGTCAAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITTSRRR*GSQAAG
Trigger: ACCTGCAGCTTGACTACCCCATCTTCTACGTGATGT...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGAATGTAGCCCACACTaGCAATCAAAGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRECSPH*QSKRSR
Trigger: ACGACTCCTCTTTGATTGCCAGTGTGGGCTACATTC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGAATGTAGCCCACACTaGCAATCAAAGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGECSPH*QSKRSR
Trigger: ACGACTCCTCTTTGATTGCCAGTGTGGGCTACATTC...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCCTGGCATGGCATCCATaGAAATATAGGGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: QGLAESARLVPGGQGLFLLAWHP*KYRAQM
Trigger: CATTTGAGCCCTATATTTCCATGGATGCCATGCCAG...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCATGTTCTGCATACCTaGCATGGCATCCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVHVLHT*HGIHGN
Trigger: ATTTCCATGGATGCCATGCCAGGTATGCAGAACATG...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCCCCAGAGGCACTTCTaGAGCCGTGCTCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYPQRHF*SRALLA
Trigger: TGCAAGAAGAGCACGGCTCCAGAAGTGCCTCTGGGG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCTCTATCCCGTCCACCTaGAATAATGCTTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPSIPST*NNASIP
Trigger: GGGGATGGAAGCATTATTCCAGGTGGACGGGATAGA...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGGATACAGCATCCTTTaGTCACTGTCAGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITGYSIL*SLSEEA
Trigger: AGCTTCCTCTGACAGTGACCAAAGGATGCTGTATCC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATTGTGCCTCCCTCTGCTaGCCTGGAGGGCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYCASLC*PGGQEL
Trigger: TAGTTCCTGCCCTCCAGGCCAGCAGAGGGAGGCACA...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAACCGTGCCGTCAAACTaGCTGGTTTCCACTAGAAAA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITTVPSN*LVSTRK
Trigger: TTTTCTAGTGGAAACCAGCCAGTTTGACGGCACGGT...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CCTGCTTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATATCACAGCTGCAGAGTaGCCTTGTCTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PACVLIHHSCRVALSAADITAAE*PCLLLM
Trigger: CATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT...ATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAAGCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGCAAGCAGAACAGAATaGTCTCCACCAGCATGTACA +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSASRTE*SPPACT
Trigger: TGTACATGCTGGTGGAGATCATTCTGTTCTGCTTGC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGATTCTTCCTCCACACTaGACAAGCCCTCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRILPPH*TSPPFQ
Trigger: TTGAAAAGGAGGGCTTGTTCAGTGTGGAGGAAGAAT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGACTGTCCCCATGATCTaGAGCAGACATGAAATTACA +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVTVPMI*SRHEIT
Trigger: TGTAATTTCATGTCTGCTTCAGATCATGGGGACAGT...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGAAGGAGACCGAGGTGTaGTATTTAACATTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVKETEV*YLTLLA
Trigger: TGCAAGCAATGTTAAATATCACACCTCGGTCTCCTT...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGTGCTGTGATGGCAACTaGAGTTTAAACCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVCCDGN*SLNPSL
Trigger: CAAACTTGGGTTTAAACTTCAGTTGCCATCACAGCA...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAAGTCTTTCAGGTGCTTaGATTACTCAAAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CSTGKGQGLAESARLVPGSLSGA*ITQRLS
Trigger: GGAGAGCCTTTGAGTAATTCAAGCACCTGAAAGACT...TCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGACTCGGACTCTTCGTaGAACCCGGAGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGDSDSS*NPEAQP
Trigger: AGGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCGGCCAGCTCACGAGGTaGCTGGTGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GGRAHSRKVGRKMHILATGQLTR*LVTFSP
Trigger: AGGCGAGAATGTCACCAGGCACCTCGTGAGCTGGCC...GGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGTCCAGGTAAAATATTaGACCTGCTGTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVVQVKY*TCCDSN
Trigger: ATTGCTATCACAGCAGGTGCAATATTTTACCTGGAC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCGTCATCCCTTTATCGTaGATGTTCTGCATACCTGGC +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPVIPLS*MFCIPG
Trigger: GCCAGGTATGCAGAACATGCACGATAAAGGGATGAC...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGCCCTGTTTTGGAGAATaGTTGCTTCTCCCAGACATA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRPCFGE*LLLPDI
Trigger: TATGTCTGGGAGAAGCAAGCATTCTCCAAAACAGGG...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGTGGGGTGCAGGAATCTaGATTTTACATATGCTTCTA +
Preference number: 4 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVWGAGI*ILHMLL
Trigger: TAGAAGCATATGTAAAATGCAGATTCCTGCACCCCA...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCATTGGATGGAGAAATaGCACAGATCCTATGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPHWMEK*HRSYGE
Trigger: CTCCCCATAGGATCTGTGGCATTTCTCCATCCAATG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATTGTGGGATCCGTCCATaGTGGTCTAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDCGIRP*WSSGAS
Trigger: GGATGCGCCACTAGACCACCATGGACGGATCCCACA...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERAPRLRR*SYLWEA
Trigger: TGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGG...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGATGTGGCAGTACTTCTaGAGGTTAAGTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRMWQYF*RLSAML
Trigger: CAGCATTGCACTTAACCTCCAGAAGTACTGCCACAT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGAATGTAGCCCACACTaGCAATCAAAGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSECSPH*QSKRSR
Trigger: ACGACTCCTCTTTGATTGCCAGTGTGGGCTACATTC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACATCTGCATACCTGGCATaGCATCCATGGAAATATAGG +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITSAYLA*HPWKYR
Trigger: CCTATATTTCCATGGATGCCATGCCAGGTATGCAGA...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACATGTTCTGCATACCTaGCATGGCATCCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITHVLHT*HGIHGN
Trigger: ATTTCCATGGATGCCATGCCAGGTATGCAGAACATG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCTCTTCTTGCATGACTaGCAGGGTGGCAGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLFLHD*QGGRSV
Trigger: TACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCAACAGTGTCTGCAGTTaGGGTGCAGGAATCTGCATT +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPNSVCS*GAGICI
Trigger: AATGCAGATTCCTGCACCCCAACTGCAGACACTGTT...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGCTCCCACGTCCTCTTaGATACACTTTAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITAPTSS*IHFKLL
Trigger: AAGGAGTTTAAAGTGTATCCAAGAGGACGTGGGAGC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCTCAAGAAAGCTGGCTaGCCCAAGCCTAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLKKAG*PKPKRP
Trigger: GGGCCTTTTAGGCTTGGGCCAGCCAGCTTTCTTGAG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGGAAGGCTGCCGGGCTaGTTCCCCAACACTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMGRLPG*FPNTSL
Trigger: CAGGCTAGTGTTGGGGAACCAGCCCGGCAGCCTTCC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATACCATGTCTTGGTCTTaGAATAGGCCCGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYTMSWS*NRPGDP
Trigger: AGGATCCCCGGGCCTATTTCAAGACCAAGACATGGT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTCATTTAACCCCCACTGAGGGGCACGATGAGTaGCAGCGGCGCGAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: WKKNAHISHLCTSHLTPTEGHDE*QRREGV
Trigger: TACGCCTTCGCGCCGCTGTCACTCATCGTGCCCCTC...AGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCGAGGGGCACGATGAGTaGCAGCGGCGCGAAGGCGTA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFEGHDE*QRREGV
Trigger: TACGCCTTCGCGCCGCTGTCACTCATCGTGCCCCTC...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATTCACGAGGTGCCTGGTaGCATTCTCGCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDSRGAW*HSRLSS
Trigger: AGATGACAGGCGAGAATGTCACCAGGCACCTCGTGA...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTTAGCAGGGTCTCCATaGCGGTCATTTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLAGSP*RSFSVA
Trigger: GGCCACAGAAAATGACCGTCATGGAGACCCTGCTAA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACCAGCCCAAGACAGATaGTGGCTCCACACCCACTGT +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGPAQDR*WLHTHC
Trigger: ACAGTGGGTGTGGAGCCATCATCTGTCTTGGGCTGG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCCTATCAGCCAGTGTTaGAACAGCTTTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPPISQC*NSFGIH
Trigger: GTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGACTCGGACTCTTCGTaGAACCCGGAGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVDSDSS*NPEAQP
Trigger: AGGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTGGCGGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGACTCGGACTCTTCGTaGAACCCGGAGGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: CGGGRAHSRKVGRKMHILDSDSS*NPEAQP
Trigger: AGGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTC...TAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACCGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp TGTGGCGGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTACTGCAGCTTCAGGGCTaGGCTGTGGGATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: CGGGRAHSRKVGRKMHILLQLQG*AVGSVH
Trigger: ATGGACGGATCCCACAGCGCAGCCCTGAAGCTGCAG...TAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACCGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCTGCAGCTTCAGGGCTaGGCTGTGGGATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLQLQG*AVGSVH
Trigger: ATGGACGGATCCCACAGCGCAGCCCTGAAGCTGCAG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTTGTGGGAGGCAGCTaGTGCAGCTTCAGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AHSRKVGRKMHILATCAHLVGGS*CSFRAA
Trigger: CGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAG...ATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp TGTGGCGGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGGGATCCTTGGAGCCTaGCAGGCGGATGTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: CGGGRAHSRKVGRKMHILGILGA*QADVAV
Trigger: TACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCC...TAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACCGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp CTGGAGGTCAGGGGCTGTTTCTCGATCTCATTTTTAAGAAGTCTTTCAGGTGCTGGCCAGCTCACGAGGTaGCTGGTGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LEVRGCFSISFLRSLSGAGQLTR*LVTFSP
Trigger: AGGCGAGAATGTCACCAGGCACCTCGTGAGCTGGCC...AGCACCTGAAAGACTTCTTAAAAATGAGATCGAGAAACAGCCCCTGACCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCACTGATAGACGGCGGTTaGCACCATGCACACGAACAT +
Preference number: 4 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPLIDGG*HHAHEH
Trigger: ATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAG...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGCAAACATGCAGATGTaGAGCACGTCCTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYANMQM*STSSPM
Trigger: CATCGGGGAGGACGTGCTGCACATCTGCATGTTTGC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGCACTTCTGGAGCCGTaGTCTTCTTGCATGACTGGC +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYALLEP*SSCMTG
Trigger: GCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCCTGGGTCTTCCAAATaGTTAGCACACAGTAAATGC +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPPGSSK*LAHSKC
Trigger: GCATTTACTGTGTGCTAAGCATTTGGAAGACCCAGG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTCACCCAGGCTGGAGTaGAGTAGCATGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYSPRLE*SSMIMA
Trigger: AGCCATGATCATGCTACTGCACTCCAGCCTGGGTGA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTATTCACATGGAAGGCTaGCGGGCTGGTTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTIHMEG*RAGSPT
Trigger: TGTTGGGGAACCAGCCCGGCAGCCTTCCATGTGAAT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCTGCTTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATAGGTGCCTCAGCCATTaGCTACCCTTTTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: PACVLIHHSCRVALSAADRCLSH*LPFCTK
Trigger: TTTTGTGCAAAAGGGTAGGCAATGGCTGAGGCACCT...ATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGGGATCCGTCCATGGTaGTCTAGTGGCGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVGIRPW*SSGASH
Trigger: GTGGGATGCGCCACTAGACCACCATGGACGGATCCC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPRLRR*SYLWEA
Trigger: TGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGTCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRSRQCC*RSSPCR
Trigger: TCTACAAGGAGAAGAACGCCAACAACATTGTCGTGA...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTCTTTCCAAATCCCCCTaGGCTAATCCAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTLSKSP*ANPGRG
Trigger: GCCTCTGCCTGGATTAGCCCAGGGGGATTTGGAAAG...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTAAGAATGCAGACCCGTaGGCCCCACTCCAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVKNADP*APLQSH
Trigger: GTGGGACTGGAGTGGGGCCCACGGGTCTGCATTCTT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGACGCAATACAGAAGTaGTTATCACAGACAACAGAT +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVDAIQK*LSQTTD
Trigger: ATCTGTTGTCTGTGATAACCACTTCTGTATTGCGTC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ATCGGAAGTGTCCTGACAAGCCACTGCAAGGGCAGGGTCTCCCTGATTCAACAGCCTGCTGGGCAGTATTaGGCTGATTCACATGCTTAT +
Preference number: 4 (lower is better)
Translates to: IGSVLTSHCKGRVSLIQQPAGQY*ADSHAY
Trigger: ATAAGCATGTGAATCAGCCCAATACTGCCCAGCAGG...CTGTTGAATCAGGGAGACCCTGCCCTTGCAGTGGCTTGTCAGGACACTTCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp TGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTAAACCTTCTGAGAAATaGCTCGGACTCTTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: CFCSTGKGQGLAESARLVKPSEK*LGLFVQ
Trigger: TTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTT...AACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCCTATCAAAACCTTCTaGGAAATGACTCGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPPIKTF*EMTRTL
Trigger: AAGAGTCCGAGTCATTTCTCAGAAGGTTTTGATAGG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATAGCTGCAGGTTCCCTTaGATGGACAAGACAAGCATC +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYSCRFP*MDKTSI
Trigger: GATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACGC +
Preference number: 4 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPGVVHL*GLTQKR
Trigger: GCGTTTTTGAGTCAAGCCTCACAGATGTACGACTCC...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp GGCAGGCTGGCTACAGCAAGAAGGACAGACAACAGCTTAATAACGAGAGAGGAGGCACGTCCTCCCCGATaGAGTCCAGGTAAAATATTG +
Preference number: 4 (lower is better)
Translates to: GRLATARRTDNSLITREEARPPR*SPGKIL
Trigger: CAATATTTTACCTGGACTTCATCGGGGAGGACGTGC...CTCCTCTCTCGTTATTAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACCAACCCTCATCATTTaGAATTTCCAAGACCAAGAT +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITPTLII*NFQDQD
Trigger: ATCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGCCCAGCCTGCCATGTaGAGGCAACACGAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMAQPAM*RQHECY
Trigger: ATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCTATGTTGCCCAGGCTaGTATAAAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLCCPG*YKTPGL
Trigger: GAGCCCAGGAGTTTTATATCAGCCTGGGCAACATAG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGAATATATTCTAAGGTaGCTTCATTTACACCGCTTC +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVEYILR*LHLHRF
Trigger: GAAGCGGTGTAAATGAAGTCACCTTAGAATATATTC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAGTGTCCTGACAAGCCACTGCAAGGGCAGGGTCTCCCTGATTCAACAGCTGACAGTCTTTCAGGTGCTTaGATTACTCAAAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KCPDKPLQGQGLPDSTADSLSGA*ITQRLS
Trigger: GGAGAGCCTTTGAGTAATTCAAGCACCTGAAAGACT...GTCAGCTGTTGAATCAGGGAGACCCTGCCCTTGCAGTGGCTTGTCAGGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp CCTGCTTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATTACATCTGTGAGGCTTaGCTCAAAAACCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: PACVLIHHSCRVALSAADYICEA*LKNRAF
Trigger: AAATGCCCGGTTTTTGAGTCAAGCCTCACAGATGTA...ATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGATGCTGACCACGAGGTaGCCGAAGATCGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMMLTTR*PKIAKR
Trigger: CCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCAT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCTTCTGGAGGTTAAGTaGAATGCTGACCACGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYLLEVK*NADHEV
Trigger: CACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCACTTCTGGAGGTTAAGTaGAATGCTGACCACGAGGTG +
Preference number: 4 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPLLEVK*NADHEV
Trigger: CACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAG...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATCTCGTGACTGTTGGGTaGGAATGTCACCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDLVTVG*ECHQQV
Trigger: TACCTGCTGGTGACATTCGCACCCAACAGTCACGAG...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGTAAAATATTGCACCTaGTGTGATAGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVVKYCT*CDSNGC
Trigger: ACAACCATTGCTATCACAGCAGGTGCAATATTTTAC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCGTAAAATATTGCACCTaGTGTGATAGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: QGLAESARLVPGGQGLFLVKYCT*CDSNGC
Trigger: ACAACCATTGCTATCACAGCAGGTGCAATATTTTAC...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATACCCCAGTGCAAACATaGAGATGTGCAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYTPVQT*RCAARP
Trigger: AGGACGTGCTGCACATCTGCATGTTTGCACTGGGGT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GAGTTGCTATACTCAGGCAGGCTGGCTACAGCAAGAAGGACAGACAACAGCTTAACCCCAGTGCAAACATaGAGATGTGCAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: ELLYSGRLATARRTDNSLTPVQT*RCAARP
Trigger: AGGACGTGCTGCACATCTGCATGTTTGCACTGGGGT...TAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGCCTGCCTGAGTATAGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAGGGTTGGCCCAGCCTaGCATGTGAAGGCAACACGA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMRVGPA*HVKATR
Trigger: TCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTCTCCCAGACATATATaGATGGGGATGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYSPRHI*MGMRTQ
Trigger: CTGGGTCCTCATCCCCATGCATATATGTCTGGGAGA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGTTTTGGAGAATGCTTaGTTCTCCCAGACATATATG +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITVLENA*FSQTYM
Trigger: CATATATGTCTGGGAGAAGCAAGCATTCTCCAAAAC...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATTTGTGCCTCCCTCTaGTGGCCTGGAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVICASL*WPGGQE
Trigger: TTCCTGCCCTCCAGGCCAGCAGAGGGAGGCACAAAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTTTAGGTACCTGGGCTaGTCAAAAGGAGACCGAGGT +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYFRYLG*SKGDRG
Trigger: ACCTCGGTCTCCTTTTGAGCAGCCCAGGTACCTAAA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCGCTGGAGCTACTTGTaGGAGGCAGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AHSRKVGRKMHILATCAHRWSYL*EAAAAA
Trigger: AGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCG...ATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAAGGGCTCAAATGGAATaGGCTTCTTCCTGTTACGCG +
Preference number: 4 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPRAQME*ASSCYA
Trigger: CGCGTAACAGGAAGAAGCCCATTCCATTTGAGCCCT...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACATCTTATTTTGTAGCCTaGGTCTTCCAAATGCTTAGC +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITSYFVA*VFQMLS
Trigger: GCTAAGCATTTGGAAGACCCAGGCTACAAAATAAGA...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCCCATCAGAGATTCCTaGGTATTTGTGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYPIRDS*VFVPPS
Trigger: AGAGGGAGGCACAAATACCCAGGAATCTCTGATGGG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTTCCCACCACCTTCCCTaGCTTTCCTTTCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTSHHLP*LSFLCP
Trigger: TGGGCAAAGAAAGGAAAGCCAGGGAAGGTGGTGGGA...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTCAAGAAAGCTGGCTaGCCCAAGCCTAAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLKKAG*PKPKRP
Trigger: GGGCCTTTTAGGCTTGGGCCAGCCAGCTTTCTTGAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTACATTCAAGAGGGCTTaGGGACGTCAGAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTTFKRA*GRQSHE
Trigger: CTCATGGCTCTGACGTCCCCAAGCCCTCTTGAATGT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTGCTTTGGAATTCACATaGAAGGCTGCCGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTALEFT*KAAGLV
Trigger: AACCAGCCCGGCAGCCTTCCATGTGAATTCCAAAGC...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCGAGAAGTGGACAGCGTaGCTTAAGGAGGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGRAHSRKVGRKMHILATEKWTA*LKEGGS
Trigger: TGACCCTCCCTCCTTAAGCCACGCTGTCCACTTCTC...GGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp AAGTGTCCTGACAAGCCACTGCAAGGGCAGGGTCTCCCTGATTCAACAGCTGACGGCTTTAACCTTACCTaGCATGGCATCCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: KCPDKPLQGQGLPDSTADGFNLT*HGIHGN
Trigger: ATTTCCATGGATGCCATGCCAGGTAAGGTTAAAGCC...GTCAGCTGTTGAATCAGGGAGACCCTGCCCTTGCAGTGGCTTGTCAGGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTACCATGTCTTGGTCTTaGAATAGGCCCGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVTMSWS*NRPGDP
Trigger: AGGATCCCCGGGCCTATTTCAAGACCAAGACATGGT...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTTCACGAGGTGCCTGGTaGCATTCTCGCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVSRGAW*HSRLSS
Trigger: AGATGACAGGCGAGAATGTCACCAGGCACCTCGTGA...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR TCA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCGCCCAAGAATGCAATaGGGCACCCCAGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVRPRMQ*GTPVQT
Trigger: TGTTTGCACTGGGGTGCCTCATTGCATTCTTGGGCG...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCGCCCAAGAATGCAATaGGGCACCCCAGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMRPRMQ*GTPVQT
Trigger: TGTTTGCACTGGGGTGCCTCATTGCATTCTTGGGCG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGTGGCACTGTCCCCATaGTCTGAAGCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYVALSP*SEADMK
Trigger: TTTCATGTCTGCTTCAGATCATGGGGACAGTGCCAC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGGGACGTCAGAGCCATaGGTAACAATAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYGTSEP*VTITNQ
Trigger: CTGGTTCGTTATTGTTACTCATGGCTCTGACGTCCC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTCCCCAACACTAGCCTaGTGGAGTCCTGTATCCGCA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMSPTLA*WSPVSA
Trigger: TGCGGATACAGGACTCCATCAGGCTAGTGTTGGGGA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GATGTTCAGCTAGACCCACGGGGCTTTAACCTTACCTGGCATGGCATCCATGGAGGCCTTGTCTGCTGCTaGTGTTCTGTGAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: DVQLDPRGFNLTWHGIHGGLVCC*CSVKLF
Trigger: AAACAATTTCACAGAACATCAGCAGCAGACAAGGCC...TCCATGGATGCCATGCCAGGTAAGGTTAAAGCCCCGTGGGTCTAGCTGAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATCTTCACTCAGAGAAGTaGCAATTTCCGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDLHSEK*QFPWLS
Trigger: GGAGAGCCACGGAAATTGGCACTTCTCTGAGTGAAG...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCCTCGTGACTGTTGGGTaGGAATGTCACCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERALVTVG*ECHQQV
Trigger: TACCTGCTGGTGACATTCGCACCCAACAGTCACGAG...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCGGCCAGCTCACGAGGTaGCTGGTGACATTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFGQLTR*LVTFSP
Trigger: AGGCGAGAATGTCACCAGGCACCTCGTGAGCTGGCC...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCGGCGGTTGCCACCATaGACACGAACATCACGTAGA +
Preference number: 4 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVRRLPP*TRTSRR
Trigger: TCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCG...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGCAAACATGCAGATGTaGAGCACGTCCTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVANMQM*STSSPM
Trigger: CATCGGGGAGGACGTGCTGCACATCTGCATGTTTGC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CTGGAGGTCAGGGGCTGTTTCTCGATCTCATTTTTAAGAAGTCTTTCAGGTGCTGCAAACATGCAGATGTaGAGCACGTCCTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: LEVRGCFSISFLRSLSGAANMQM*STSSPM
Trigger: CATCGGGGAGGACGTGCTGCACATCTGCATGTTTGC...AGCACCTGAAAGACTTCTTAAAAATGAGATCGAGAAACAGCCCCTGACCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTACCCCAGTGCAAACATaGAGATGTGCAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVTPVQT*RCAARP
Trigger: AGGACGTGCTGCACATCTGCATGTTTGCACTGGGGT...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAATGAGGCACCCCAGTaGAAACATGCAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYNEAPQ*KHADVQ
Trigger: CTGCACATCTGCATGTTTGCACTGGGGTGCCTCATT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGAATGAGGCACCCCAGTaGAAACATGCAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: FTVQNTYNRKCPDKPLQGNEAPQ*KHADVQ
Trigger: CTGCACATCTGCATGTTTGCACTGGGGTGCCTCATT...CCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGCACTTCTGGAGCCGTaGTCTTCTTGCATGACTGGC +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMALLEP*SSCMTG
Trigger: GCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAAATGCTGGCCCCTCTaGCTCGGGGGTGATCACCCT +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFKCWPL*LGGDHP
Trigger: AGGGTGATCACCCCCGAGGCAGAGGGGCCAGCATTT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGATATTTAACATTGCTTaGAACATTCAAGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QNLPPRVGPACHVKATRVIFNIA*NIQEGL
Trigger: CAAGCCCTCTTGAATGTTGCAAGCAATGTTAAATAT...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATTCACATGGAAGGCTaGCGGGCTGGTTCCCCAACA +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVIHMEG*RAGSPT
Trigger: TGTTGGGGAACCAGCCCGGCAGCCTTCCATGTGAAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GGCAGGCTGGCTACAGCAAGAAGGACAGACAACAGCTTAATAACGAGAGAGGAGTCTTCCCATTCCACCTaGTTGTGTCCTGATCCATCA +
Preference number: 4 (lower is better)
Translates to: GRLATARRTDNSLITREESSHST*LCPDPS
Trigger: TGATGGATCAGGACACAAGCAGGTGGAATGGGAAGA...CTCCTCTCTCGTTATTAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAAGAACTGGCAAGATGTaGTCAAAACCAACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPRTGKM*SKPTEV
Trigger: CACCTCGGTTGGTTTTGAGCACATCTTGCCAGTTCT...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp TGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTACTTCAAGGCTGTTTTaGCAGATTTACAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CFCSTGKGQGLAESARLVTSRLF*QIYSLL
Trigger: GAGAAGGCTGTAAATCTGCCAAAACAGCCTTGAAGT...AACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCGCTGGAGCTACTTGTaGGAGGCAGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFRWSYL*EAAAAA
Trigger: AGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WKKNAHISHLCTSHLTPTPRLRR*SYLWEA
Trigger: TGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGG...AGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCACTCGGACATATCTTTaGGCATTTGTTTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSTRTYL*AFVSST
Trigger: AGTTGAGGAAACAAATGCCCAAAGATATGTCCGAGT...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS-3UTR CCA 90 bp AATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAATGTGGCAGTACTTCTaGAGGTTAAGTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: NCFCSTGKGQGLAESARLMWQYF*RLSAML
Trigger: CAGCATTGCACTTAACCTCCAGAAGTACTGCCACAT...TAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCCTGTCACCACTGTCATaGAGCCAAGTAACGCCACCA +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERALSPLS*SQVTPP
Trigger: TGGTGGCGTTACTTGGCTCCATGACAGTGGTGACAG...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCGTAGTATTCATTGGATaGAGAAATGCCACAGATCCT +
Preference number: 4 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSVVFIG*RNATDP
Trigger: AGGATCTGTGGCATTTCTCCATCCAATGAATACTAC...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACACACAATACAGAAGTaGTTAAGACGCAATACAGAA +
Preference number: 4 (lower is better)
Translates to: STQGWPSLPCEGNTSAITHTIQK*LRRNTE
Trigger: TTCTGTATTGCGTCTTAACCACTTCTGTATTGTGTG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGACGGTCATTTTCTGTaGCCCACGACCGCACTTCAC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVDGHFL*PTTALH
Trigger: GTGAAGTGCGGTCGTGGGCCACAGAAAATGACCGTC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTCATGAACCATCAGTaGCTCCCACGTCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLMNHQ*LPRPLG
Trigger: TCCAAGAGGACGTGGGAGCCACTGATGGTTCATGAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAACATTCAAGAGGGCTTaGGGACGTCAGAGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGTFKRA*GRQSHE
Trigger: CTCATGGCTCTGACGTCCCCAAGCCCTCTTGAATGT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 72 bp GAACAAGCTGGGTTGAAGGAGCACATTGACATTGAGTaGCTATACTCAGGCAGGCTGGCTACAGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EQAGLKEHIDIE*LYSGRLATARR
Trigger: CCTTCTTGCTGTAGCCAGCCTGCCTGAGTATAGCAACTCAATGTCAATGTGCTCCTTCAACCCAGCTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACGC +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGGVVHL*GLTQKR
Trigger: GCGTTTTTGAGTCAAGCCTCACAGATGTACGACTCC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTAGAAGGGCACAGATaGCTGGAAGGCAGATGTACA +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLEGHR*LEGRCT
Trigger: TGTACATCTGCCTTCCAGTCATCTGTGCCCTTCTAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGCTGCTGATGTTCTGTaGAATTGTTTCTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: NCFCSTGKGQGLAESARLAADVL*NCFCST
Trigger: TGTGGAACAGAAACAATTTCACAGAACATCAGCAGC...TAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTTCACTCAGAGAAGTaGCAATTTCCGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLHSEK*QFPWLS
Trigger: GGAGAGCCACGGAAATTGGCACTTCTCTGAGTGAAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTCATTTAACCCCCACTATGCTGACCACGAGGTaGCCGAAGATCGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: WKKNAHISHLCTSHLTPTMLTTR*PKIAKR
Trigger: CCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCAT...AGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCTGATAGACGGCGGTTaGCACCATGCACACGAACAT +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLIDGG*HHAHEH
Trigger: ATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTCTGATAGACGGCGGTTaGCACCATGCACACGAACAT +
Preference number: 4 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSLIDGG*HHAHEH
Trigger: ATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAG...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAAATGAGGCACCCCAGTaGAAACATGCAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGNEAPQ*KHADVQ
Trigger: CTGCACATCTGCATGTTTGCACTGGGGTGCCTCATT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTGTCATCCCTTTATCGTaGATGTTCTGCATACCTGGC +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTVIPLS*MFCIPG
Trigger: GCCAGGTATGCAGAACATGCACGATAAAGGGATGAC...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTGTCTGCAGTTGGGGTaGAGGAATCTGCATTTTACA +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYCLQLG*RNLHFT
Trigger: TGTAAAATGCAGATTCCTGCACCCCAACTGCAGACA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTTAGCTCTGTGCCTTTaGAAATGCTGGCCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLALCL*KCWPLC
Trigger: GCAGAGGGGCCAGCATTTGCAAAGGCACAGAGCTAA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCTCCTCTTAGCTCTGTaGCTTTGCAAATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVLLLAL*LCKCWP
Trigger: GGGCCAGCATTTGCAAAGGCACAGAGCTAAGAGGAG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGCTCCACACCCACTGTaGTTCCTGACTACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMAPHPL*FLTTQV
Trigger: CACTTGAGTAGTCAGGAAGCACAGTGGGTGTGGAGC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCTGTCACCACTGTCATaGAGCCAAGTAACGCCACCA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLSPLS*SQVTPP
Trigger: TGGTGGCGTTACTTGGCTCCATGACAGTGGTGACAG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAAGGGCTCAAATGGAATaGGCTTCTTCCTGTTACGCG +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGRAQME*ASSCYA
Trigger: CGCGTAACAGGAAGAAGCCCATTCCATTTGAGCCCT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGGCATGCACATGAGGTaGAGGAAGACGAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYGMHMR*RKTRFR
Trigger: TCTAAATCTCGTCTTCCTCCACCTCATGTGCATGCC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCTAAGTAGTATTCATTaGATGGAGAAATGCCACAGA +
Preference number: 4 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPLSSIH*MEKCHR
Trigger: TCTGTGGCATTTCTCCATCCAATGAATACTACTTAG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGAGTGATCTATCACACTaGTCTATTAACACTGTTATC +
Preference number: 4 (lower is better)
Translates to: RVGPACHVKATRVLSQMRSDLSH*SINTVI
Trigger: GATAACAGTGTTAATAGACCAGTGTGATAGATCACT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACCCATCAGAGATTCCTaGGTATTTGTGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGPIRDS*VFVPPS
Trigger: AGAGGGAGGCACAAATACCCAGGAATCTCTGATGGG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCTCATGAACCATCAGTaGCTCCCACGTCCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMLMNHQ*LPRPLG
Trigger: TCCAAGAGGACGTGGGAGCCACTGATGGTTCATGAG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCACTGGACAAAGATTaGGAGGAACCAGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPLDKD*EEPAQD
Trigger: GTCTTGGGCTGGTTCCTCCCAATCTTTGTCCAGTGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAACCAGGGCTATGAGTaGAATCCTGATGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYNQGYE*NPDVPL
Trigger: AAGGGGTACATCAGGATTCCACTCATAGCCCTGGTT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTTGCTTTAGGTACCTaGGCTGCTCAAAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLALGT*AAQKET
Trigger: GGTCTCCTTTTGAGCAGCCCAGGTACCTAAAGCAAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTATCACAGCTGCAGAGTaGCCTTGTCTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSITAAE*PCLLLM
Trigger: CATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCTATACTCAGGCAGGCTaGCTACAGCAAGAAGGACAG +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERAYTQAG*LQQEGQ
Trigger: CTGTCCTTCTTGCTGTAGCCAGCCTGCCTGAGTATA...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CAA 72 bp ATCAGCAGACAGTCCATTTATACCACTGGACAAAGATaGGGAGGAACCAGCCCAAGACAGATGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ISRQSIYTTGQR*GGTSPRQMMAP
Trigger: TGGAGCCATCATCTGTCTTGGGCTGGTTCCTCCCAATCTTTGTCCAGTGGTATAAATGGACTGTCTGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCCTGTCATCTTCTCGTaGCTGTTGGGTGCGAATGTC +
Preference number: 4 (lower is better)
Translates to: AHSRKVGRKMHILATCAHPVIFS*LLGANV
Trigger: GACATTCGCACCCAACAGTCACGAGAAGATGACAGG...ATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGCACGTCCTCCCCGATaGAGTCCAGGTAAAATATTG +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVARPPR*SPGKIL
Trigger: CAATATTTTACCTGGACTTCATCGGGGAGGACGTGC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CTGGAGGTCAGGGGCTGTTTCTCGATCTCATTTTTAAGAAGTCTTTCAGGTGCTGCACGTCCTCCCCGATaGAGTCCAGGTAAAATATTG +
Preference number: 4 (lower is better)
Translates to: LEVRGCFSISFLRSLSGAARPPR*SPGKIL
Trigger: CAATATTTTACCTGGACTTCATCGGGGAGGACGTGC...AGCACCTGAAAGACTTCTTAAAAATGAGATCGAGAAACAGCCCCTGACCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGCCTTTCGCTGGATTTaGGAATTAACAGCAGACTCT +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYAFRWI*ELTADS
Trigger: AGAGTCTGCTGTTAATTCTCAAATCCAGCGAAAGGC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAGGCTGTCTCTGAAATaGGCATCCCCATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMRLSLK*ASPSFQ
Trigger: CTGGAAAGATGGGGATGCTCATTTCAGAGACAGCCT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATATTCTTCCTCCACACTaGACAAGCCCTCCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYILPPH*TSPPFQ
Trigger: TTGAAAAGGAGGGCTTGTTCAGTGTGGAGGAAGAAT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGTGGCACTGTCCCCATaGTCTGAAGCAGACATGAAA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMVALSP*SEADMK
Trigger: TTTCATGTCTGCTTCAGATCATGGGGACAGTGCCAC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTGCTGTGATGGCAACTaGAGTTTAAACCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYCCDGN*SLNPSL
Trigger: CAAACTTGGGTTTAAACTTCAGTTGCCATCACAGCA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAGCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGGGCAGGGGGATCACTTaGGGCCAGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KHTTLFMKVFKKANLQGQGRGIT*GQEVKA
Trigger: AGCCTTGACCTCCTGGCCTCAAGTGATCCCCCTGCC...CTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTCTTCACTCAGAGAAGTaGCAATTTCCGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSLHSEK*QFPWLS
Trigger: GGAGAGCCACGGAAATTGGCACTTCTCTGAGTGAAG...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCGGCGGTTGCCACCATaGACACGAACATCACGTAGA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFRRLPP*TRTSRR
Trigger: TCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTTTAGGTACCTGGGCTaGTCAAAAGGAGACCGAGGT +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVFRYLG*SKGDRG
Trigger: ACCTCGGTCTCCTTTTGAGCAGCCCAGGTACCTAAA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTAAGAAGTCTTTCAGGTaGTTGAATTACTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CFCSTGKGQGLAESARLVKKSFR*LNYSKA
Trigger: AGCCTTTGAGTAATTCAAGCACCTGAAAGACTTCTT...AACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp GGCAGGCTGGCTACAGCAAGAAGGACAGACAACAGCTTAATAACGAGAGAGGAGTCAGCAGTTTTATTCTaGATGTTCTACCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GRLATARRTDNSLITREESAVLF*MFYLPP
Trigger: TGGTGGCAGGTAGAACATGCAGAATAAAACTGCTGA...CTCCTCTCTCGTTATTAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCCTGCCAGGCGGATGTaGCAGTACTTCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFPARRM*QYFWRL
Trigger: TAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTTCTTCTCGTGACTGTTaGGTGCGAATGTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVSSRDC*VRMSPA
Trigger: TGCTGGTGACATTCGCACCCAACAGTCACGAGAAGA...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAGGGCTCAAATGGAATaGGCTTCTTCCTGTTACGCG +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMRAQME*ASSCYA
Trigger: CGCGTAACAGGAAGAAGCCCATTCCATTTGAGCCCT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTAGGGCTCAAATGGAATaGGCTTCTTCCTGTTACGCG +
Preference number: 4 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSRAQME*ASSCYA
Trigger: CGCGTAACAGGAAGAAGCCCATTCCATTTGAGCCCT...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCTCTTCTTGCATGACTaGCAGGGTGGCAGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFLFLHD*QGGRSV
Trigger: TACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGGCATGCACATGAGGTaGAGGAAGACGAGATTTAGA +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGGMHMR*RKTRFR
Trigger: TCTAAATCTCGTCTTCCTCCACCTCATGTGCATGCC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCATGGCTCAGGTTGGTaGGATGATGCCACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFHGSGW*DDATAP
Trigger: TGGAGCAGTGGCATCATCCCACCAACCTGAGCCATG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGTCCATTTATACCACTaGACAAAGATTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYVHLYH*TKIGRN
Trigger: GTTCCTCCCAATCTTTGTCCAGTGGTATAAATGGAC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCTTGCTTTAGGTACCTaGGCTGCTCAAAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVLALGT*AAQKET
Trigger: GGTCTCCTTTTGAGCAGCCCAGGTACCTAAAGCAAG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATTGCCGTCAAACTGGCTaGTTTCCACTAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYCRQTG*FPLEKQ
Trigger: TTGCTTTTCTAGTGGAAACCAGCCAGTTTGACGGCA...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAAAACCTTCTGAGAAATaGCTCGGACTCTTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGKPSEK*LGLFVQ
Trigger: TTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTTCTTCCTGTTACGCGTaGTTAAGAAGACGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVSSCYA*LRRRPR
Trigger: TCTTGGGCGTCTTCTTAATCACGCGTAACAGGAAGA...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTCTTCCTGTTACGCGTaGTTAAGAAGACGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVSSCYA*LRRRPR
Trigger: TCTTGGGCGTCTTCTTAATCACGCGTAACAGGAAGA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCCAACCCTCATCATTTaGAATTTCCAAGACCAAGAT +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYPTLII*NFQDQD
Trigger: ATCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTTTGCCACCCATCTATaGGTGGGGCCAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMFATHL*VGPKSS
Trigger: AGATGATTTTGGCCCCACTCATAGATGGGTGGCAAA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCTTGTGTTTCTCGGTATaGATCCTTAGCTCGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERALCFSV*ILSSLG
Trigger: TCCTAGCGAGCTAAGGATTCATACCGAGAAACACAA...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp ACGCTCTTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGTTAGGTCAGCAAATCTaGGGTTGGTCCAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: TLFTVQNTYNRKCPDKPLLGQQI*GWSNVL
Trigger: TAAGACATTGGACCAACCTCAGATTTGCTGACCTAA...CAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAAGAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTGGGGCCCAGGCCAGATaGCATCTCTCCTTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFGAQAR*HLSLWC
Trigger: ACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCC...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AAGCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGGGGGCCCAGGCCAGATaGCATCTCTCCTTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KHTTLFMKVFKKANLQGQGAQAR*HLSLWC
Trigger: ACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCC...CTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp GCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTTCTGGAGGTTAAGTaGAATGCTGACCACGAGGTG +
Preference number: 4 (lower is better)
Translates to: AHSRKVGRKMHILATCAHLLEVK*NADHEV
Trigger: CACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAG...ATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGTCCAGGTAAAATATTaGACCTGCTGTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPVQVKY*TCCDSN
Trigger: ATTGCTATCACAGCAGGTGCAATATTTTACCTGGAC...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCACCCCAGTGCAAACATaGAGATGTGCAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFTPVQT*RCAARP
Trigger: AGGACGTGCTGCACATCTGCATGTTTGCACTGGGGT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCGAGTGCTATCACAGATaGGGCATCAGGAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFECYHR*GIRSVR
Trigger: CCTGACACTCCTGATGCCGCATCTGTGATAGCACTC...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGTTTTGGAGAATGCTTaGTTCTCCCAGACATATATG +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYVLENA*FSQTYM
Trigger: CATATATGTCTGGGAGAAGCAAGCATTCTCCAAAAC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATTGGGGTGCAGGAATCTaGATTTTACATATGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYWGAGI*ILHMLL
Trigger: TAGAAGCATATGTAAAATGCAGATTCCTGCACCCCA...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTCTGCAGTTGGGGTaGAGGAATCTGCATTTTACA +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGCLQLG*RNLHFT
Trigger: TGTAAAATGCAGATTCCTGCACCCCAACTGCAGACA...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATACTTCAAGGCTGTTTTaGCAGATTTACAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDTSRLF*QIYSLL
Trigger: GAGAAGGCTGTAAATCTGCCAAAACAGCCTTGAAGT...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATACTTCAAGGCTGTTTTaGCAGATTTACAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYTSRLF*QIYSLL
Trigger: GAGAAGGCTGTAAATCTGCCAAAACAGCCTTGAAGT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGACATCACGTAGAAGATaGGGTAGTCAAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMTSRRR*GSQAAG
Trigger: ACCTGCAGCTTGACTACCCCATCTTCTACGTGATGT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTCTGGCATGGCATCCATaGAAATATAGGGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVLAWHP*KYRAQM
Trigger: CATTTGAGCCCTATATTTCCATGGATGCCATGCCAG...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTGTGCCTCCCTCTGCTaGCCTGGAGGGCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFCASLC*PGGQEL
Trigger: TAGTTCCTGCCCTCCAGGCCAGCAGAGGGAGGCACA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTAACCAGGGCTATGAGTaGAATCCTGATGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVNQGYE*NPDVPL
Trigger: AAGGGGTACATCAGGATTCCACTCATAGCCCTGGTT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCACTAGAAAAGCAATaGAGAGTCAGCTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPLEKQ*RVSSPF
Trigger: GAAGGGAGAGCTGACTCTCCATTGCTTTTCTAGTGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCCCTTTAGAGAAGTaGACAGCGTGGCTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: WKKNAHISHLCTSHLTPTPPLEK*TAWLKE
Trigger: CTCCTTAAGCCACGCTGTCCACTTCTCTAAAGGGGG...AGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000358028.8
3UTR CAA 72 bp CACATATGCGGCCAGGAAGAAAGCAACAGCCCTGTTTaGGAGAATGCTTGCTTCTCCCAGACATATATGCAT +
Preference number: 4 (lower is better)
Translates to: HICGQEESNSPV*ENACFSQTYMH
Trigger: ATGCATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGCTTTCTTCCTGGCCGCATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 72 bp CACACAAGTAACCTTTTGTCTGCCTATCAGCCAGTGTaGAAACAGCTTTGGAATTCACATGGAAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HTSNLLSAYQPV*KQLWNSHGRLP
Trigger: CGGCAGCCTTCCATGTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGCAGACAAAAGGTTACTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAGCCTCTGTCCTTCATaGCACTGTGACTCGGACATA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFSLCPS*HCDSDI
Trigger: TATGTCCGAGTCACAGTGTCATGAAGGACAGAGGCT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTACTTATTCCCCCTTCTaGTTCTTCCTCCACACTGAA +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVTYSPF*FFLHTE
Trigger: TTCAGTGTGGAGGAAGAATCAGAAGGGGGAATAAGT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCTATCAGCCAGTGTTaGAACAGCTTTGGAATTCAC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPISQC*NSFGIH
Trigger: GTGAATTCCAAAGCTGTTTCAACACTGGCTGATAGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTAGCAGTTGTCTGTTGTaGAGATATGAATCTGGCATG +
Preference number: 4 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVSSCLL*RYESGM
Trigger: CATGCCAGATTCATATCTTCACAACAGACAACTGCT...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTGTGTTTTCCAGTTCTTaGGGTGCTCGGCGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFVFSSS*GARRRL
Trigger: GAGACGCCGCCGAGCACCGCAAGAACTGGAAAACAC...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCCCTGTTTTGGAGAATaGTTGCTTCTCCCAGACATA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMPCFGE*LLLPDI
Trigger: TATGTCTGGGAGAAGCAAGCATTCTCCAAAACAGGG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATTCTAGGGGATCCTTATaGCCATTAAAGTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYSRGSL*PLKFAN
Trigger: GTTTGCAAACTTTAATGGGCATAAGGATCCCCTAGA...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCTGGGTCTTCCAAATaGTTAGCACACAGTAAATGC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPGSSK*LAHSKC
Trigger: GCATTTACTGTGTGCTAAGCATTTGGAAGACCCAGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TGTGGCGGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTACATATTAGCCACCTGTaGACATCTCATTTAACCCCC +
Preference number: 4 (lower is better)
Translates to: CGGGRAHSRKVGRKMHILHISHL*TSHLTP
Trigger: GGGGGTTAAATGAGATGTGCACAGGTGGCTAATATG...TAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACCGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTGTGGGATCCGTCCATaGTGGTCTAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFCGIRP*WSSGAS
Trigger: GGATGCGCCACTAGACCACCATGGACGGATCCCACA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp TGTGGCGGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAATGTGGCAGTACTTCTaGAGGTTAAGTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: CGGGRAHSRKVGRKMHILMWQYF*RLSAML
Trigger: CAGCATTGCACTTAACCTCCAGAAGTACTGCCACAT...TAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACCGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATGTGGCAGTACTTCTaGAGGTTAAGTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVMWQYF*RLSAML
Trigger: CAGCATTGCACTTAACCTCCAGAAGTACTGCCACAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCTCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERASRQCC*RSSPCR
Trigger: TCTACAAGGAGAAGAACGCCAACAACATTGTCGTGA...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGCTTTAAGTTCAGGCTaGACAGTCATCCCTTTATCG +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMALSSG*TVIPLS
Trigger: CGATAAAGGGATGACTGTCCAGCCTGAACTTAAAGC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCTCAAGCTTGGCTTGTaGCTCTGTAATGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFLKLGL*LCNGET
Trigger: CGTCTCTCCATTACAGAGCCACAAGCCAAGCTTGAG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATGTAGTATTCATTGGATaGAGAAATGCCACAGATCCT +
Preference number: 4 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYVVFIG*RNATDP
Trigger: AGGATCTGTGGCATTTCTCCATCCAATGAATACTAC...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCTCCCTCTGCTGGCCTaGAGGGCAGGAACTATGTCT +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFLPLLA*RAGTMS
Trigger: AGACATAGTTCCTGCCCTCCAGGCCAGCAGAGGGAG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAGTCCATTTATACCACTaGACAAAGATTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGVHLYH*TKIGRN
Trigger: GTTCCTCCCAATCTTTGTCCAGTGGTATAAATGGAC...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTGCCGTCAAACTGGCTaGTTTCCACTAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMCRQTG*FPLEKQ
Trigger: TTGCTTTTCTAGTGGAAACCAGCCAGTTTGACGGCA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTCCCCAACACTAGCCTaGTGGAGTCCTGTATCCGCA +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFSPTLA*WSPVSA
Trigger: TGCGGATACAGGACTCCATCAGGCTAGTGTTGGGGA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GAGTTGCTATACTCAGGCAGGCTGGCTACAGCAAGAAGGACAGACAACAGCTTAGGTCAAACAAGTGTGTaGAACTTCCAAAGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: ELLYSGRLATARRTDNSLGQTSV*NFQRFL
Trigger: TAAAAACCTTTGGAAGTTTCACACACTTGTTTGACC...TAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGCCTGCCTGAGTATAGCAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTCACCTCTGTTTAGACTaGGACTGTTCAGCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSHLCLD*DCSAVL
Trigger: TAAAACTGCTGAACAGTCTCAGTCTAAACAGAGGTG...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp ACGCTCTTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGGTAAAATATTGCACCTaGTGTGATAGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: TLFTVQNTYNRKCPDKPLVKYCT*CDSNGC
Trigger: ACAACCATTGCTATCACAGCAGGTGCAATATTTTAC...CAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAAGAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTGTCCAGGTAAAATATTaGACCTGCTGTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVVQVKY*TCCDSN
Trigger: ATTGCTATCACAGCAGGTGCAATATTTTACCTGGAC...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCTTATCGTGCATGTTCTaGATACCTGGCATGGCATCC +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFLSCMF*IPGMAS
Trigger: GGATGCCATGCCAGGTATGCAGAACATGCACGATAA...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCCTGTATCCGCACCGTaGCGTCAAACTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFPVSAP*RQTGWF
Trigger: AAACCAGCCAGTTTGACGGCACGGTGCGGATACAGG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTGCCATCTCTCCTTGTaGTGTTCACCTCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFCHLSL*CSPPSS
Trigger: GCTGGAGGGAGGTGAACACCACAAGGAGAGATGGCA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAGGATGGATTCCCCACAGCTCTATTTAGCTATAAAATTATATGCAGTTCTAGCCCTGCCAGGCGGATGTaGCAGTACTTCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: KDGFPTALFSYKIICSSSPARRM*QYFWRL
Trigger: TAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGG...GCTAGAACTGCATATAATTTTATAGCTAAATAGAGCTGTGGGGAATCCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVSRQCC*RSSPCR
Trigger: TCTACAAGGAGAAGAACGCCAACAACATTGTCGTGA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AATCTGAGCAGCCAGATTAGACGTTTAAAAAGTTCATGCACCAAAGCTCATGCAACCAGGGAAACCAAGTaGCTGGAAAAGCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: NLSSQIRRLKSSCTKAHATRETK*LEKHLC
Trigger: ACAGAGGTGCTTTTCCAGCCACTTGGTTTCCCTGGT...TGCATGAGCTTTGGTGCATGAACTTTTTAAACGTCTAATCTGGCTGCTCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp TGGAAGAAAAATGCACATATTAGCCACCTGTGCACATCTCATTTAACCCCCACTAAACCTTCTGAGAAATaGCTCGGACTCTTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: WKKNAHISHLCTSHLTPTKPSEK*LGLFVQ
Trigger: TTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTT...AGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAATATGTGCATTTTTCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp AAGGATGGATTCCCCACAGCTCTATTTAGCTATAAAATTATATGCAGTTCTAGCACCATGTCTTGGTCTTaGAATAGGCCCGGGGATCCT +
Preference number: 4 (lower is better)
Translates to: KDGFPTALFSYKIICSSSTMSWS*NRPGDP
Trigger: AGGATCCCCGGGCCTATTTCAAGACCAAGACATGGT...GCTAGAACTGCATATAATTTTATAGCTAAATAGAGCTGTGGGGAATCCATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp AAGCAGTCCTCTAGACCATCAGTGTGTTTATATTTTGTTCATGAGATTGTGTTACAATCGGAAGTGTCCTaGCAAGCCACTGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KQSSRPSVCLYFVHEIVLQSEVS*QATARA
Trigger: TGCCCTTGCAGTGGCTTGTCAGGACACTTCCGATTG...TAACACAATCTCATGAACAAAATATAAACACACTGATGGTCTAGAGGACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGTCCAGGTAAAATATTaGACCTGCTGTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMVQVKY*TCCDSN
Trigger: ATTGCTATCACAGCAGGTGCAATATTTTACCTGGAC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGAAGTCTTTCAGGTaGTTGAATTACTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERAKKSFR*LNYSKA
Trigger: AGCCTTTGAGTAATTCAAGCACCTGAAAGACTTCTT...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR GCA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATAGCTATAAAATTATATaGAGTTCTAGCCAGGTACAG +
Preference number: 4 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDSYKII*SSSQVQ
Trigger: CTGTACCTGGCTAGAACTGCATATAATTTTATAGCT...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp CCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCCGTTTAAAAAGTTCATaGACCAAAGCTCATGCACTT +
Preference number: 4 (lower is better)
Translates to: PCLLLMFCEIVSVPQERARLKSS*TKAHAL
Trigger: AAGTGCATGAGCTTTGGTGCATGAACTTTTTAAACG...GGCCCTTTCCTGTGGAACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp AATCTGAGCAGCCAGATTAGACGTTTAAAAAGTTCATGCACCAAAGCTCATGCAACATCACGTAGAAGATaGGGTAGTCAAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NLSSQIRRLKSSCTKAHATSRRR*GSQAAG
Trigger: ACCTGCAGCTTGACTACCCCATCTTCTACGTGATGT...TGCATGAGCTTTGGTGCATGAACTTTTTAAACGTCTAATCTGGCTGCTCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp AATCTGAGCAGCCAGATTAGACGTTTAAAAAGTTCATGCACCAAAGCTCATGCAGAATGTAGCCCACACTaGCAATCAAAGAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: NLSSQIRRLKSSCTKAHAECSPH*QSKRSR
Trigger: ACGACTCCTCTTTGATTGCCAGTGTGGGCTACATTC...TGCATGAGCTTTGGTGCATGAACTTTTTAAACGTCTAATCTGGCTGCTCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCTGGCATGGCATCCATaGAAATATAGGGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFLAWHP*KYRAQM
Trigger: CATTTGAGCCCTATATTTCCATGGATGCCATGCCAG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCGCTTTAAGTTCAGGCTaGACAGTCATCCCTTTATCG +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFALSSG*TVIPLS
Trigger: CGATAAAGGGATGACTGTCCAGCCTGAACTTAAAGC...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTAATCCAGGCAGAGGCTaGATTCTATCCCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFNPGRG*ILSRPP
Trigger: AGGTGGACGGGATAGAATCCAGCCTCTGCCTGGATT...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAAGGGCACAGATGACTaGAAGGCAGATGTACATTTC +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFKGTDD*KADVHF
Trigger: GAAATGTACATCTGCCTTCCAGTCATCTGTGCCCTT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTAGTGATCTATCACACTaGTCTATTAACACTGTTATC +
Preference number: 4 (lower is better)
Translates to: GESALPSLPSVQLHTAKTSDLSH*SINTVI
Trigger: GATAACAGTGTTAATAGACCAGTGTGATAGATCACT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCGCTCCCACGTCCTCTTaGATACACTTTAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFAPTSS*IHFKLL
Trigger: AAGGAGTTTAAAGTGTATCCAAGAGGACGTGGGAGC...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp CTGGAGGTCAGGGGCTGTTTCTCGATCTCATTTTTAAGAAGTCTTTCAGGTGCTGATATGAATCTGGCATaGCATCCATGGAAATATAGG +
Preference number: 4 (lower is better)
Translates to: LEVRGCFSISFLRSLSGADMNLA*HPWKYR
Trigger: CCTATATTTCCATGGATGCCATGCCAGATTCATATC...AGCACCTGAAAGACTTCTTAAAAATGAGATCGAGAAACAGCCCCTGACCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339255.2
3UTR CAA 72 bp ACACACATATACATACACATACTTGCACACACAGAGTaGACACCTCACCTATCTGGAATTCAGCTATCCAGC +
Preference number: 4 (lower is better)
Translates to: THIYIHILAHTE*TPHLSGIQLSS
Trigger: GCTGGATAGCTGAATTCCAGATAGGTGAGGTGTCAACTCTGTGTGTGCAAGTATGTGTATGTATATGTGTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTTTAGGATTCAGGGTTaGACCACTGTCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFFRIQG*TTVSLE
Trigger: CTCCAGGCTGACAGTGGTTCAACCCTGAATCCTAAA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCTATGTTGCCCAGGCTaGTATAAAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFLCCPG*YKTPGL
Trigger: GAGCCCAGGAGTTTTATATCAGCCTGGGCAACATAG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTATTCAAGACCCTCCATaGTTCGGCCTCCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFIQDPP*FGLHCL
Trigger: TAAGCAGTGGAGGCCGAATCATGGAGGGTCTTGAAT...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCACTGTCCCCATGATCTaGAGCAGACATGAAATTACA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFTVPMI*SRHEIT
Trigger: TGTAATTTCATGTCTGCTTCAGATCATGGGGACAGT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAAGGAGACCGAGGTGTaGTATTTAACATTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFKETEV*YLTLLA
Trigger: TGCAAGCAATGTTAAATATCACACCTCGGTCTCCTT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGAATATATTCTAAGGTaGCTTCATTTACACCGCTTC +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVEYILR*LHLHRF
Trigger: GAAGCGGTGTAAATGAAGTCACCTTAGAATATATTC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCTTCTGGAGGTTAAGTaGAATGCTGACCACGAGGTG +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFLLEVK*NADHEV
Trigger: CACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGTAAAATATTGCACCTaGTGTGATAGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVVKYCT*CDSNGC
Trigger: ACAACCATTGCTATCACAGCAGGTGCAATATTTTAC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCACACAATACAGAAGTaGTTAAGACGCAATACAGAA +
Preference number: 4 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMHTIQK*LRRNTE
Trigger: TTCTGTATTGCGTCTTAACCACTTCTGTATTGTGTG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 72 bp CATATATATGCCCAAATTATTAATGATCACCCGGGTTaGACACATCTAAATAGCCTCCCTGCTCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: HIYAQIINDHPG*THLNSLPAHLL
Trigger: CAGAAGGTGAGCAGGGAGGCTATTTAGATGTGTCAAACCCGGGTGATCATTAATAATTTGGGCATATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 72 bp AACAGTCACACGATAAAGGCACAGCACAGCAGTTGGTaGTCTCTTTTTAAACAGGAAGTAGCAGTCATTCTA +
Preference number: 4 (lower is better)
Translates to: NSHTIKAQHSSW*SLFKQEVAVIL
Trigger: TAGAATGACTGCTACTTCCTGTTTAAAAAGAGACAACCAACTGCTGTGCTGTGCCTTTATCGTGTGACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
3UTR CAA 72 bp CAGCAACCTACAGAGTTTAGGTCAGCAAATCTGAGGTaGGTCCAATGTCTTAACTTTTCTAATCCGAATTCC +
Preference number: 4 (lower is better)
Translates to: QQPTEFRSANLR*VQCLNFSNPNS
Trigger: GGAATTCGGATTAGAAAAGTTAAGACATTGGACCAACCTCAGATTTGCTGACCTAAACTCTGTAGGTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTCTTCCTGTTACGCGTaGTTAAGAAGACGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFSSCYA*LRRRPR
Trigger: TCTTGGGCGTCTTCTTAATCACGCGTAACAGGAAGA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGAAAGGTATCTATTTGGTTaGTGGCTTGTGGCGGTGGTA +
Preference number: 4 (lower is better)
Translates to: AYDFIYEGVQKGKSTGTERYLFG*WLVAVV
Trigger: TACCACCGCCACAAGCCATCAACCAAATAGATACCT...TTCTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR TCA 90 bp TTGTCTATGTTTAGTCAGGCTAGCAGAGTAGTCCTGTTTGTGTTCTTTTATTTAGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACCG +
Preference number: 4 (lower is better)
Translates to: LSMFSQASRVVLFVFFYLGVVHL*GLTQKP
Trigger: CGGTTTTTGAGTCAAGCCTCACAGATGTACGACTCC...TAAATAAAAGAACACAAACAGGACTACTCTGCTAGCCTGACTAAACATAGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCTCCTTTTCAATCAGTaGTGGTCCTGCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFLLFNQ*WSCPSL
Trigger: AAGAGAAGGGCAGGACCAGCACTGATTGAAAAGGAG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR GCA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTATATTTAACATTGCTTaGAACATTCAAGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: STLQKLHNLNPAVMATEVIFNIA*NIQEGL
Trigger: CAAGCCCTCTTGAATGTTGCAAGCAATGTTAAATAT...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCCACTAGAAAAGCAATaGAGAGTCAGCTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFPLEKQ*RVSSPF
Trigger: GAAGGGAGAGCTGACTCTCCATTGCTTTTCTAGTGG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTAAACCTTCTGAGAAATaGCTCGGACTCTTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFKPSEK*LGLFVQ
Trigger: TTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTT...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTACTTATTCCCCCTTCTaGTTCTTCCTCCACACTGAA +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFTYSPF*FFLHTE
Trigger: TTCAGTGTGGAGGAAGAATCAGAAGGGGGAATAAGT...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR TCA 90 bp GCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGAAAAACCCTGTCTTCGGTaGCAGGTATCTATTTGGTTG +
Preference number: 4 (lower is better)
Translates to: AYDFIYEGVQKGKSTGTEKPCLR*QVSIWL
Trigger: CAACCAAATAGATACCTGTCACCGAAGACAGGGTTT...TTCTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTCTGGCATGGCATCCATaGAAATATAGGGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFLAWHP*KYRAQM
Trigger: CATTTGAGCCCTATATTTCCATGGATGCCATGCCAG...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTCTGCATACCTGGCATaGCATCCATGGAAATATAGG +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFSAYLA*HPWKYR
Trigger: CCTATATTTCCATGGATGCCATGCCAGGTATGCAGA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
3UTR CAA 72 bp ACCAAAACCAAGTTTCGTTTTCAGAGTAGATCCAATTaGAACATATCAAGCACATCTTCCCTAGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TKTKFRFQSRSN*NISSTSSLEGH
Trigger: GTGCCCTTCTAGGGAAGATGTGCTTGATATGTTCAAATTGGATCTACTCTGAAAACGAAACTTGGTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp GCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGAATCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: AYDFIYEGVQKGKSTGTESRQCC*RSSPCR
Trigger: TCTACAAGGAGAAGAACGCCAACAACATTGTCGTGA...TTCTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR GCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTTCTAGGGGATCCTTATaGCCATTAAAGTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFSRGSL*PLKFAN
Trigger: GTTTGCAAACTTTAATGGGCATAAGGATCCCCTAGA...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CCA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTGACGCAATACAGAAGTaGTTATCACAGACAACAGAT +
Preference number: 4 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFDAIQK*LSQTTD
Trigger: ATCTGTTGTCTGTGATAACCACTTCTGTATTGCGTC...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCGGCGCTGGAGCTACTaGTGGGAGGCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: GKGQGLAESARLVPGGQGRRWSY*WEAAAA
Trigger: TGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCG...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS GCA 90 bp AAGGAGGCCTCGCTTACGGCGCTGGAGCTACTTGTGGGAGGCAGCTaGTGCAGCTTCAGGGCTGCGCTGTGGGATCCGTCCATGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KEASLTALELLVGGS*CSFRAALWDPSMVV
Trigger: GACCACCATGGACGGATCCCACAGCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS CCA 90 bp CTCCTCAGGGCAGCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCAGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: LLRAACRRRRPRLRR*SYLWEAAAAASGLR
Trigger: GCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGCTGCCCTGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS-3UTR CAA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGGGAGCCGTGCTCTTCTaGCATGACTGGCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVGAVLF*HDWQGG
Trigger: GCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCC...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS TCA 90 bp GATGGCACTAGCTATCACAGAAACTGCGCTGAGGGGCACGATGAGTaGCAGCGGCGCGAAGGCGTAGGAGGCGAACACACCCAGCTCGCC +
Preference number: 5 (lower is better)
Translates to: DGTSYHRNCAEGHDE*QRREGVGGEHTQLA
Trigger: GGCGAGCTGGGTGTGTTCGCCTCCTACGCCTTCGCGCCGCTGTCACTCATCGTGCCCCTCAGCGCAGTTTCTGTGATAGCTAGTGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS CCA 90 bp AGTCTCCTTGTCTCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCAGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: SLLVSCRRRRPRLRR*SYLWEAAAAASGLR
Trigger: GCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGAGACAAGGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475663.2
CDS CCA 90 bp AAAAAGCCCTTGCCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCAGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: KKPLPCRRRRPRLRR*SYLWEAAAAASGLR
Trigger: GCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGGCAAGGGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488155.1
CDS CCA 90 bp GAGCTGCTGCTAGGCGGGGCCCAGGCCAGATGCCATCTCTCCTTGTaGTGTTCACCTCCCTCCAGCAGCCGTCACTTCCTCATGACAAAA +
Preference number: 5 (lower is better)
Translates to: ELLLGGAQARCHLSL*CSPPSSSRHFLMTK
Trigger: TTTTGTCATGAGGAAGTGACGGCTGCTGGAGGGAGGTGAACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCCGCCTAGCAGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS CCA 90 bp CAATCAGGTTTTCCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCAGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: QSGFPCRRRRPRLRR*SYLWEAAAAASGLR
Trigger: GCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGGAAAACCTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS-3UTR CAA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCTGTGTTTTCCAGTTCTaGCGGTGCTCGGCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: QGLAESARLVPGGQGLFLCVFQF*RCSAAS
Trigger: AGACGCCGCCGAGCACCGCAAGAACTGGAAAACACA...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CAA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCCTGATAGACGGCGGTaGCCACCATGCACACGAACA +
Preference number: 5 (lower is better)
Translates to: QNLPPRVGPACHVKATRVPDRRR*PPCTRT
Trigger: TGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGG...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGTGGCTCACTGTAGCCTaGGCTCTCTGGGCTCTAGCG +
Preference number: 5 (lower is better)
Translates to: RVGPACHVKATRVLSQMRWLTVA*ALWALA
Trigger: CGCTAGAGCCCAGAGAGCCAAGGCTACAGTGAGCCA...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAATCCCAGCCACGGCCTaGACTGTCACCACTGTCATG +
Preference number: 5 (lower is better)
Translates to: STQGWPSLPCEGNTSAITIPATA*TVTTVM
Trigger: CATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGAT...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCGGCGCTGGAGCTACTaGTGGGAGGCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYRRWSY*WEAAAA
Trigger: TGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AAGAGCAGCGCGGTAGCAGGCTTCACCAGCCCTGACACCAGCCTGCTCCTCCGCAGAATCACGACAATGTaGTTGGCGTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KSSAVAGFTSPDTSLLLRRITTM*LAFFSL
Trigger: CAAGGAGAAGAACGCCAACAACATTGTCGTGATTCT...GCGGAGGAGCAGGCTGGTGTCAGGGCTGGTGAAGCCTGCTACCGCGCTGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGAAGCTGCAGGTTCCCTaGAATGGACAAGACAAGCAT +
Preference number: 5 (lower is better)
Translates to: GKGQGLAESARLVPGGQGKLQVP*NGQDKH
Trigger: ATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTT...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACTTAGCTCTGTGCCTTaGCAAATGCTGGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: STQGWPSLPCEGNTSAITLSSVP*QMLAPL
Trigger: CAGAGGGGCCAGCATTTGCAAAGGCACAGAGCTAAG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS TCA 90 bp GGCGGCGTCTCCTCTAAGGCCCACCTATCAAAACCTTCTGAGAAATaGCTCGGACTCTTCGTGCAACCCGGAGGCACAGCCTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: GGVSSKAHLSKPSEK*LGLFVQPGGTASFI
Trigger: GATGAAGGAGGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTTTGATAGGTGGGCCTTAGAGGAGACGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000488155.1
CDS TCA 90 bp GGTAGGGGACCCCAGAGGCACTTCTGGAGCCGTGCTCTTCTTGCATaGCTGGCAGGGTGGCAGGAGCGTAGATCTCAGAAATGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: GRGPQRHFWSRALLA*LAGWQERRSQKCCH
Trigger: ATGACAACATTTCTGAGATCTACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGCCTCTGGGGTCCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS GCA 90 bp GTGCCTGGTGACATTCTCGCCTGTCATCTTCTCGTGACTGTTGGGTaGGAATGTCACCAGCAGGTAGGTACCCACGACAGCCAAACCGCA +
Preference number: 5 (lower is better)
Translates to: VPGDILACHLLVTVG*ECHQQVGTHDSQTA
Trigger: TGCGGTTTGGCTGTCGTGGGTACCTACCTGCTGGTGACATTCGCACCCAACAGTCACGAGAAGATGACAGGCGAGAATGTCACCAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS-3UTR CAA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATCGGCGCTGGAGCTACTaGTGGGAGGCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDRRWSY*WEAAAA
Trigger: TGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCG...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGAGTCTCATTCCTTCTaGGTGTGCTCTAGGACTCGG +
Preference number: 5 (lower is better)
Translates to: RVGPACHVKATRVLSQMRESHSF*VCSRTR
Trigger: CCGAGTCCTAGAGCACACCAAGAAGGAATGAGACTC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCTTCTGAATACCCCTTaGGGCTCAGGGTCCGACCTT +
Preference number: 5 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPLLNTP*GSGSDL
Trigger: AAGGTCGGACCCTGAGCCCAAAGGGGTATTCAGAAG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACCTGCTTGTGTCCTGATCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCAGCTGCAGAGTGGCCTaGTCTGCTGCTGATGTTCTG +
Preference number: 5 (lower is better)
Translates to: STCLCPDPSQLQSGLVCCSCRVA*SAADVL
Trigger: CAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCT...GCAGCAGACAAGGCCACTCTGCAGCTGTGATGGATCAGGACACAAGCAGGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS GCA 90 bp CCACCATGTCTTGGTCTTGAAATAGGCCCGGGGATCCTTGGAGCCTaGCAGGCGGATGTGGCAGTACTTCTGGAGGTTAAGTGCAATGCT +
Preference number: 5 (lower is better)
Translates to: PPCLGLEIGPGILGA*QADVAVLLEVKCNA
Trigger: AGCATTGCACTTAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCTATTTCAAGACCAAGACATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS CCA 90 bp GGGGACCCCAGAGGCACTTCTGGAGCCGTGCTCTTCTTGCATGACTaGCAGGGTGGCAGGAGCGTAGATCTCAGAAATGTTGTCATTGTT +
Preference number: 5 (lower is better)
Translates to: GDPRGTSGAVLFLHD*QGGRSVDLRNVVIV
Trigger: AACAATGACAACATTTCTGAGATCTACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGCCTCTGGGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACGGCGCTGGAGCTACTaGTGGGAGGCAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGRRWSY*WEAAAA
Trigger: TGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGAGAATCACGACAATGTaGTTGGCGTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVRITTM*LAFFSL
Trigger: CAAGGAGAAGAACGCCAACAACATTGTCGTGATTCT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCGAGTCTCATTCCTTCTaGGTGTGCTCTAGGACTCGG +
Preference number: 5 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPESHSF*VCSRTR
Trigger: CCGAGTCCTAGAGCACACCAAGAAGGAATGAGACTC...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGAGGATACAGCATCCTTaGGTCACTGTCAGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: RVGPACHVKATRVLSQMRRIQHP*VTVRGS
Trigger: GCTTCCTCTGACAGTGACCAAAGGATGCTGTATCCT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGGGGGGCAGAGTAAGTTaGGGAGCATATATATGCCCA +
Preference number: 5 (lower is better)
Translates to: RVGPACHVKATRVLSQMRGGRVS*GAYICP
Trigger: TGGGCATATATATGCTCCCAAACTTACTCTGCCCCC...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCAGCACAGCAGTTGGTaGTCTCTTTTTAAACAGGAA +
Preference number: 5 (lower is better)
Translates to: GKGQGLAESARLVPGGQGQHSSW*SLFKQE
Trigger: TTCCTGTTTAAAAAGAGACAACCAACTGCTGTGCTG...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCCACATTGACATTGAGTaGCTATACTCAGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QGLAESARLVPGGQGLFLHIDIE*LYSGRL
Trigger: CAGCCTGCCTGAGTATAGCAACTCAATGTCAATGTG...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS TCA 90 bp GCAGGTTCCCTTGAATGGACAAGACAAGCATCCCAGCCACGGCCTTaGCTGTCACCACTGTCATGGAGCCAAGTAACGCCACCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: AGSLEWTRQASQPRP*LSPLSWSQVTPPRE
Trigger: TTCTCTTGGTGGCGTTACTTGGCTCCATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGATGCTTGTCTTGTCCATTCAAGGGAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS-3UTR CAA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAATCCCAGCCACGGCCTaGACTGTCACCACTGTCATG +
Preference number: 5 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPIPATA*TVTTVM
Trigger: CATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGAT...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CAA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCAGCAACAGCCCTGTTTaGGAGAATGCTTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSSNSPV*ENACFS
Trigger: GGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGCT...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATGAGATTCCTGGGTATTaGTGCCTCCCTCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYEIPGY*CLPLLA
Trigger: GGCCAGCAGAGGGAGGCACAAATACCCAGGAATCTC...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACATTCCACTACTTAGCTTaGAGACTCATCTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: STQGWPSLPCEGNTSAITFHYLA*RLISHH
Trigger: GTGGTGGGAGATGAGTCTCAAAGCTAAGTAGTGGAA...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp CAGAACCTTCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGGCCTATCAGCCAGTGTaGAAACAGCTTTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: QNLPPRVGPACHVKATRVAYQPV*KQLWNS
Trigger: TGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGC...CACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGAAGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACACACACAAGTAACCTTTaGTCTGCCTATCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: STQGWPSLPCEGNTSAITHTSNL*SAYQPV
Trigger: CACTGGCTGATAGGCAGACAAAAGGTTACTTGTGTG...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGGAATTTGAATACCTCTaGAACAGCAGTTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GKGQGLAESARLVPGGQGEFEYL*NSSCLL
Trigger: CAACAGACAACTGCTGTTCAAGAGGTATTCAAATTC...CCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTGGCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS TCA 90 bp CCCGGCCCATCTCTTGTCTTTTGCTTACACATTCCCTTGTCTGTGTaGAGAGCCTGCCTGTTTCTACCAGTGACAGGCATGCAGACCCCA +
Preference number: 5 (lower is better)
Translates to: PGPSLVFCLHIPLSV*RACLFLPVTGMQTP
Trigger: TGGGGTCTGCATGCCTGTCACTGGTAGAAACAGGCAGGCTCTTCACACAGACAAGGGAATGTGTAAGCAAAAGACAAGAGATGGGCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488155.1
CDS GCA 90 bp AGGCTTGACTCAAAAACGCAGCCTGATAGACGGCGGTTGCCACCATaGACACGAACATCACGTAGAAGATGGGGTAGTCAAGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RLDSKTQPDRRRLPP*TRTSRRRWGSQAAG
Trigger: ACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCGTTTTTGAGTCAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS GCA 90 bp AATCTGTCTTGGAGAAGGCAGCCTGATAGACGGCGGTTGCCACCATaGACACGAACATCACGTAGAAGATGGGGTAGTCAAGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: NLSWRRQPDRRRLPP*TRTSRRRWGSQAAG
Trigger: ACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCCTTCTCCAAGACAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp ATTAGCCACCTGTGCACATCTCATTTAACCCCCACTCCCTTCCGTGACTTGGATTGTGTTTTCCAGTTCTaGCGGTGCTCGGCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: ISHLCTSHLTPTPFRDLDCVFQF*RCSAAS
Trigger: AGACGCCGCCGAGCACCGCAAGAACTGGAAAACACA...ATCCAAGTCACGGAAGGGAGTGGGGGTTAAATGAGATGTGCACAGGTGGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp GAGTTGCTATACTCAGGCAGGCTGGCTACAGCAAGAAGGACAGACAACAGCTTACCTGATAGACGGCGGTaGCCACCATGCACACGAACA +
Preference number: 5 (lower is better)
Translates to: ELLYSGRLATARRTDNSLPDRRR*PPCTRT
Trigger: TGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGG...TAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGCCTGCCTGAGTATAGCAACTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp AGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAGATGCGGAACTTCCTAATTCCTTaGGTGGAGGAGGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: RVGPACHVKATRVLSQMRNFLIP*VEEVDK
Trigger: TTTGTCCACCTCCTCCACCAAAGGAATTAGGAAGTT...CCGCATCTGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GCAGACCCGTGGGCCCCACTCCAGTCCCACTTAACAGTGTCTGCAGTTGGGGTGATACAAATCTTAGATTaGCCACCCATCTATGAGTGG +
Preference number: 5 (lower is better)
Translates to: ADPWAPLQSHLTVSAVGVIQILD*PPIYEW
Trigger: CCACTCATAGATGGGTGGCAAATCTAAGATTTGTAT...CACCCCAACTGCAGACACTGTTAAGTGGGACTGGAGTGGGGCCCACGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp ACTAGCCTGATGGAGTCCTGTATCCGCACCGTGCCGTCAAACTGGCTGGTTTCCCACACAAGTAACCTTTaGTCTGCCTATCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TSLMESCIRTVPSNWLVSHTSNL*SAYQPV
Trigger: CACTGGCTGATAGGCAGACAAAAGGTTACTTGTGTG...GGAAACCAGCCAGTTTGACGGCACGGTGCGGATACAGGACTCCATCAGGCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GCAAGATGTGCTCAAAACCAACCGAGGTGCCTCAGCCATTGCCTACCCTTTTGCGAGGTGCCTCAGCCATaGCCTACCCTTTTGCACAAA +
Preference number: 5 (lower is better)
Translates to: ARCAQNQPRCLSHCLPFCEVPQP*PTLLHK
Trigger: TTTGTGCAAAAGGGTAGGCAATGGCTGAGGCACCTC...GCAAAAGGGTAGGCAATGGCTGAGGCACCTCGGTTGGTTTTGAGCACATCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS GCA 90 bp ATGTGGCAGTACTTCTGGAGGTTAAGTGCAATGCTGACCACGAGGTaGCCGAAGATCGCCAAGAGGGCGCCAATCAGGTTTTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: MWQYFWRLSAMLTTR*PKIAKRAPIRFSLN
Trigger: ATTCAAGGAAAACCTGATTGGCGCCCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAGTACTGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS CCA 90 bp GATAGACGGCGGTTGCCACCATGCACACGAACATCACGTAGAAGATaGGGTAGTCAAGCTGCAGGTTCCCTTGAATGGACAAGACAAGCA +
Preference number: 5 (lower is better)
Translates to: DRRRLPPCTRTSRRR*GSQAAGSLEWTRQA
Trigger: TGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
ENST00000432012.1
CDS-3UTR CAA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAGATGCCATCTCTCCTaGTGGTGTTCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYRCHLS*WCSPPS
Trigger: GGAGGGAGGTGAACACCACAAGGAGAGATGGCATCT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTAGATGCCATCTCTCCTaGTGGTGTTCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GESALPSLPSVQLHTAKTRCHLS*WCSPPS
Trigger: GGAGGGAGGTGAACACCACAAGGAGAGATGGCATCT...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAATCCCAGCCACGGCCTaGACTGTCACCACTGTCATG +
Preference number: 5 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGIPATA*TVTTVM
Trigger: CATGACAGTGGTGACAGTCAAGGCCGTGGCTGGGAT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTGGCTCACTGTAGCCTaGGCTCTCTGGGCTCTAGCG +
Preference number: 5 (lower is better)
Translates to: STLQKLHNLNPAVMATEVWLTVA*ALWALA
Trigger: CGCTAGAGCCCAGAGAGCCAAGGCTACAGTGAGCCA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp CAAGGCCTGGCTGAGAGTGCCAGGCTAGTTCCTGGAGGTCAGGGGCTGTTTCTCGAATTTGAATACCTCTaGAACAGCAGTTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: QGLAESARLVPGGQGLFLEFEYL*NSSCLL
Trigger: CAACAGACAACTGCTGTTCAAGAGGTATTCAAATTC...GAGAAACAGCCCCTGACCTCCAGGAACTAGCCTGGCACTCTCAGCCAGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CAA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTTGTGTTTTCCAGTTCTaGCGGTGCTCGGCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: STLQKLHNLNPAVMATEVCVFQF*RCSAAS
Trigger: AGACGCCGCCGAGCACCGCAAGAACTGGAAAACACA...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAGCCACCAGATGCCATCTCTCCTaGTGGTGTTCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GGRAHSRKVGRKMHILATRCHLS*WCSPPS
Trigger: GGAGGGAGGTGAACACCACAAGGAGAGATGGCATCT...GGTGGCTAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp GATGTTCAGCTAGACCCACGGGGCTTTAACCTTACCTGGCATGGCATCCATGGAAAGCTGCAGGTTCCCTaGAATGGACAAGACAAGCAT +
Preference number: 5 (lower is better)
Translates to: DVQLDPRGFNLTWHGIHGKLQVP*NGQDKH
Trigger: ATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTT...TCCATGGATGCCATGCCAGGTAAGGTTAAAGCCCCGTGGGTCTAGCTGAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGCCTGATAGACGGCGGTaGCCACCATGCACACGAACA +
Preference number: 5 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMPDRRR*PPCTRT
Trigger: TGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGG...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp CTGGAGGTCAGGGGCTGTTTCTCGATCTCATTTTTAAGAAGTCTTTCAGGTGCTCCTGATAGACGGCGGTaGCCACCATGCACACGAACA +
Preference number: 5 (lower is better)
Translates to: LEVRGCFSISFLRSLSGAPDRRR*PPCTRT
Trigger: TGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGG...AGCACCTGAAAGACTTCTTAAAAATGAGATCGAGAAACAGCCCCTGACCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339255.2
ENST00000432012.1
CDS-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAAGAGACAAAGGCTTTTaGAGATCATCATCCATAGAG +
Preference number: 5 (lower is better)
Translates to: STQGWPSLPCEGNTSAITRDKGF*RSSSIE
Trigger: CTCTATGGATGATGATCTCAAAAAGCCTTTGTCTCT...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp CCAGGCAGAGGCTGGATTCTATCCCGTCCACCTGGAATAATGCTTCCATCCCCCCCCAACCCTCATCATTaGAAATTTCCAAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: PGRGWILSRPPGIMLPSPPNPHH*KFPRPR
Trigger: TCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGGG...GGGGGATGGAAGCATTATTCCAGGTGGACGGGATAGAATCCAGCCTCTGCCTGG
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTGAGATTCCTGGGTATTaGTGCCTCCCTCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: STLQKLHNLNPAVMATEVEIPGY*CLPLLA
Trigger: GGCCAGCAGAGGGAGGCACAAATACCCAGGAATCTC...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACCCAGGGTTGGCCCAGCCTGCCATGTGAAGGCAACACGAGTGCTATCACAATACAAATCTTAGATTaGCCACCCATCTATGAGTGG +
Preference number: 5 (lower is better)
Translates to: STQGWPSLPCEGNTSAITIQILD*PPIYEW
Trigger: CCACTCATAGATGGGTGGCAAATCTAAGATTTGTAT...TGTGATAGCACTCGTGTTGCCTTCACATGGCAGGCTGGGCCAACCCTGGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACTTAGCTCTGTGCCTTaGCAAATGCTGGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGLSSVP*QMLAPL
Trigger: CAGAGGGGCCAGCATTTGCAAAGGCACAGAGCTAAG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GCTGGCTACAGCAAGAAGGACAGACAACAGCTTAATAACGAGAGAGGAGGAACTAGCTGCAGAGTGGCCTaGTCTGCTGCTGATGTTCTG +
Preference number: 5 (lower is better)
Translates to: AGYSKKDRQQLNNERGGTSCRVA*SAADVL
Trigger: CAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCT...AGTTCCTCCTCTCTCGTTATTAAGCTGTTGTCTGTCCTTCTTGCTGTAGCCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp ACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTGTTAGATGCCATCTCTCCTaGTGGTGTTCACCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: TAAEWPCLLLMFCEIVSVRCHLS*WCSPPS
Trigger: GGAGGGAGGTGAACACCACAAGGAGAGATGGCATCT...AACAGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CAA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAGGATACAGCATCCTTaGGTCACTGTCAGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYRIQHP*VTVRGS
Trigger: GCTTCCTCTGACAGTGACCAAAGGATGCTGTATCCT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTGGGGGCAGAGTAAGTTaGGGAGCATATATATGCCCA +
Preference number: 5 (lower is better)
Translates to: GESALPSLPSVQLHTAKTGGRVS*GAYICP
Trigger: TGGGCATATATATGCTCCCAAACTTACTCTGCCCCC...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TGTGGCGGTGGTAGGGCACACAGTAGGAAGGTTGGAAGAAAAATGCACATATTAACTCCCTTCCGTGACTaGGATGTTCTCATAGGCCCC +
Preference number: 5 (lower is better)
Translates to: CGGGRAHSRKVGRKMHILTPFRD*DVLIGP
Trigger: GGGGCCTATGAGAACATCCAAGTCACGGAAGGGAGT...TAATATGTGCATTTTTCTTCCAACCTTCCTACTGTGTGCCCTACCACCGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp TTCACAGTACAGAACACCTACAATCGGAAGTGTCCTGACAAGCCACTGCAAGGGCTTGCACACACAGAGTaGACACCTCACCTATCTGGA +
Preference number: 5 (lower is better)
Translates to: FTVQNTYNRKCPDKPLQGLAHTE*TPHLSG
Trigger: TCCAGATAGGTGAGGTGTCAACTCTGTGTGTGCAAG...CCCTTGCAGTGGCTTGTCAGGACACTTCCGATTGTAGGTGTTCTGTACTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS TCA 90 bp GAGGGCGCCAATCAGGTTTTCCTTGAATCCAGCCTCTGTCCTTCATaGCACTGTGACTCGGACATATCTTTGGGCATTTGTTTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: EGANQVFLESSLCPS*HCDSDISLGICFLN
Trigger: GTTGAGGAAACAAATGCCCAAAGATATGTCCGAGTCACAGTGTCATGAAGGACAGAGGCTGGATTCAAGGAAAACCTGATTGGCGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCTGTGTTTTCCAGTTCTaGCGGTGCTCGGCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFCVFQF*RCSAAS
Trigger: AGACGCCGCCGAGCACCGCAAGAACTGGAAAACACA...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATAATGATCACCCGGGTTaGACACATCTAAATAGCCTC +
Preference number: 5 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYNDHPG*THLNSL
Trigger: GAGGCTATTTAGATGTGTCAAACCCGGGTGATCATT...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TGTGAAATTGTTTCTGTTCCACAGGAAAGGGCCAAGGCCTGGCTGAGAGTGCCAAGGAGCACATTGACATaGAGTTGCTATACTCAGGCA +
Preference number: 5 (lower is better)
Translates to: CEIVSVPQERAKAWLRVPRSTLT*SCYTQA
Trigger: TGCCTGAGTATAGCAACTCAATGTCAATGTGCTCCT...TGGCACTCTCAGCCAGGCCTTGGCCCTTTCCTGTGGAACAGAAACAATTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS TCA 90 bp TCTCCTTGTGGTGTTCACCTCCCTCCAGCAGCCGTCACTTCCTCATaGCAAAAGAATACTTCAAGGCTGTTTTGGCAGATTTACAGCCTT +
Preference number: 5 (lower is better)
Translates to: SPCGVHLPPAAVTSS*QKNTSRLFWQIYSL
Trigger: AAGGCTGTAAATCTGCCAAAACAGCCTTGAAGTATTCTTTTGTCATGAGGAAGTGACGGCTGCTGGAGGGAGGTGAACACCACAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS TCA 90 bp CAGAATGTAGCCCACACTGGCAATCAAAGAGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACCGGGCATTTCCCTAGAGACATTCTCA +
Preference number: 5 (lower is better)
Translates to: QNVAHTGNQRGVVHL*GLTQKPGISLETFS
Trigger: TGAGAATGTCTCTAGGGAAATGCCCGGTTTTTGAGTCAAGCCTCACAGATGTACGACTCCTCTTTGATTGCCAGTGTGGGCTACATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATAGAATCACGACAATGTaGTTGGCGTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYRITTM*LAFFSL
Trigger: CAAGGAGAAGAACGCCAACAACATTGTCGTGATTCT...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTGGAGCCGTGCTCTTCTaGCATGACTGGCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFGAVLF*HDWQGG
Trigger: GCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCC...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCATTTTCTGTGGCCCACGACCGCACTTCACACCCATCAGAGATTCCTGGGTATCCCAGAGAGTCTCTATaGACTTCAAGGAAATTAACC +
Preference number: 5 (lower is better)
Translates to: SFSVAHDRTSHPSEIPGYPRESL*TSRKLT
Trigger: GGTTAATTTCCTTGAAGTCAATAGAGACTCTCTGGG...ATACCCAGGAATCTCTGATGGGTGTGAAGTGCGGTCGTGGGCCACAGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCTTCTGAATACCCCTTaGGGCTCAGGGTCCGACCTT +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFLLNTP*GSGSDL
Trigger: AAGGTCGGACCCTGAGCCCAAAGGGGTATTCAGAAG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS CCA 90 bp TGGAGCCAAGTAACGCCACCAAGAGAAGAATCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGAAGTAGAGCAGCAAGCAGAACAGAA +
Preference number: 5 (lower is better)
Translates to: WSQVTPPREESRQCC*RSSPCRSRAASRTE
Trigger: TTCTGTTCTGCTTGCTGCTCTACTTCTACAAGGAGAAGAACGCCAACAACATTGTCGTGATTCTTCTCTTGGTGGCGTTACTTGGCTCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCACACTGCAAAAACTGCATAACCTGAACCCTGCTGTGATGGCAACTGAAGTTCCAATCAGGTTTTCCTaGAATCCAGCCTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: STLQKLHNLNPAVMATEVPIRFS*NPASVL
Trigger: AAGGACAGAGGCTGGATTCAAGGAAAACCTGATTGG...AACTTCAGTTGCCATCACAGCAGGGTTCAGGTTATGCAGTTTTTGCAGTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGAAGCTGCAGGTTCCCTaGAATGGACAAGACAAGCAT +
Preference number: 5 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMKLQVP*NGQDKH
Trigger: ATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTT...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTCCCAACCCTCATCATTaGAAATTTCCAAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: GESALPSLPSVQLHTAKTPNPHH*KFPRPR
Trigger: TCTTGGTCTTGGAAATTTCAAATGATGAGGGTTGGG...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGAAGCCTTTCGCTGGATTaGAGAATTAACAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGSLSLD*RINSRL
Trigger: GAGTCTGCTGTTAATTCTCAAATCCAGCGAAAGGCT...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS CCA 90 bp GCAAGACAAGTAACGCCACCAAGAGAAGAATCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGAAGTAGAGCAGCAAGCAGAACAGAA +
Preference number: 5 (lower is better)
Translates to: ARQVTPPREESRQCC*RSSPCRSRAASRTE
Trigger: TTCTGTTCTGCTTGCTGCTCTACTTCTACAAGGAGAAGAACGCCAACAACATTGTCGTGATTCTTCTCTTGGTGGCGTTACTTGTCTTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp ATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCTAGAATCACGACAATGTaGTTGGCGTTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ITAAEWPCLLLMFCEIVSRITTM*LAFFSL
Trigger: CAAGGAGAAGAACGCCAACAACATTGTCGTGATTCT...AGAAACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2
CDS-3UTR CAA 90 bp GGAGAGTCAGCTCTCCCTTCTTTACCCAGCGTTCAACTCCACACTGCAAAAACTTGTTTTGGAGAATGCTaGCTTCTCCCAGACATATAT +
Preference number: 5 (lower is better)
Translates to: GESALPSLPSVQLHTAKTCFGEC*LLPDIY
Trigger: ATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACA...AGTTTTTGCAGTGTGGAGTTGAACGCTGGGTAAAGAAGGGAGAGCTGACTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAGCAACAGCCCTGTTTaGGAGAATGCTTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFSNSPV*ENACFS
Trigger: GGAGAAGCAAGCATTCTCCAAAACAGGGCTGTTGCT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGGCCTATCAGCCAGTGTaGAAACAGCTTTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMAYQPV*KQLWNS
Trigger: TGAATTCCAAAGCTGTTTCAACACTGGCTGATAGGC...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGATGTACTTCAAGGCTGTTTaGGCAGATTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KLPFNFLLSPFMAQVGGMYFKAV*ADLQPS
Trigger: AGAAGGCTGTAAATCTGCCAAAACAGCCTTGAAGTA...CATCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAAGCTGCAGGTTCCCTaGAATGGACAAGACAAGCAT +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFKLQVP*NGQDKH
Trigger: ATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp GCTTGCTTCTCCCAGACATATATGCATGGGGATGAGGACCCAGAGAGTCTCTATCAGAGTAGATCCAATTaGAACATATCAAGCACATCT +
Preference number: 5 (lower is better)
Translates to: ACFSQTYMHGDEDPESLYQSRSN*NISSTS
Trigger: AGATGTGCTTGATATGTTCAAATTGGATCTACTCTG...ATAGAGACTCTCTGGGTCCTCATCCCCATGCATATATGTCTGGGAGAAGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCACCAGTAACTCAAGCTaGGCTTGTGGCTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFTSNSS*ACGSVM
Trigger: CATTACAGAGCCACAAGCCAAGCTTGAGTTACTGGT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp TCCATCACAGCTGCAGAGTGGCCTTGTCTGCTGCTGATGTTCTGTGAAATTGTTTCAGCAAATCTGAGGTaGGTCCAATGTCTTAACTTT +
Preference number: 5 (lower is better)
Translates to: SITAAEWPCLLLMFCEIVSANLR*VQCLNF
Trigger: AAAGTTAAGACATTGGACCAACCTCAGATTTGCTGA...AACAATTTCACAGAACATCAGCAGCAGACAAGGCCACTCTGCAGCTGTGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS-3UTR CAA 90 bp GGAAACTACCATTTAACTTTCTGCTCAGCCCTTTCATGGCTCAGGTTGGTGGGACAGAGTAGATCCAATTaGAACATATCAAGCACATCT +
Preference number: 5 (lower is better)
Translates to: GNYHLTFCSALSWLRLVGQSRSN*NISSTS
Trigger: AGATGTGCTTGATATGTTCAAATTGGATCTACTCTG...TCCCACCAACCTGAGCCATGAAAGGGCTGAGCAGAAAGTTAAATGGTAGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCAATGATCACCCGGGTTaGACACATCTAAATAGCCTC +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFNDHPG*THLNSL
Trigger: GAGGCTATTTAGATGTGTCAAACCCGGGTGATCATT...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCCCCAGAGAGTCTCTATaGACTTCAAGGAAATTAACC +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFPRESL*TSRKLT
Trigger: GGTTAATTTCCTTGAAGTCAATAGAGACTCTCTGGG...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AAGGATGGATTCCCCACAGCTCTATTTAGCTATAAAATTATATGCAGTTCTAGCCAGGTATCTATTTGGTaGATGGCTTGTGGCGGTGGT +
Preference number: 5 (lower is better)
Translates to: KDGFPTALFSYKIICSSSQVSIW*MACGGG
Trigger: ACCACCGCCACAAGCCATCAACCAAATAGATACCTG...GCTAGAACTGCATATAATTTTATAGCTAAATAGAGCTGTGGGGAATCCATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTACCAGTAACTCAAGCTaGGCTTGTGGCTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFTSNSS*ACGSVM
Trigger: CATTACAGAGCCACAAGCCAAGCTTGAGTTACTGGT...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AGATCCTATGGGGAGTATTTAACCTTCCAAAGGAACCCTAGGGAGGAAATTTTCTGTTTTGGAGAATGCTaGCTTCTCCCAGACATATAT +
Preference number: 5 (lower is better)
Translates to: RSYGEYLTFQRNPREEIFCFGEC*LLPDIY
Trigger: ATATATGTCTGGGAGAAGCAAGCATTCTCCAAAACA...GAAAATTTCCTCCCTAGGGTTCCTTTGGAAGGTTAAATACTCCCCATAGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS-3UTR CAA 90 bp AAGCATACGACTTTATTTATGAAGGTGTTCAAAAAGGCAAATCTACAGGGACAGGGCACAGGGTTTCTTTaGGGGGTGACAAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: KHTTLFMKVFKKANLQGQGTGFL*GVTKCS
Trigger: AGAACATTTTGTCACCCCCAAAAGAAACCCTGTGCC...CTGTCCCTGTAGATTTGCCTTTTTGAACACCTTCATAAATAAAGTCGTATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358028.8
CDS-3UTR CAA 90 bp AGGAATCTGCATTTTACATATGCTTCTAGGGGATCCTTATGCCCATTAAAGTTTAACTTCCTAATTCCTTaGGTGGAGGAGGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: RNLHFTYASRGSLCPLKFNFLIP*VEEVDK
Trigger: TTTGTCCACCTCCTCCACCAAAGGAATTAGGAAGTT...AAACTTTAATGGGCATAAGGATCCCCTAGAAGCATATGTAAAATGCAGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS CCA 72 bp GCAGCTTCAGGGCTGCGCTGTGGGATCCGTCCATGGTaGTCTAGTGGCGCATCCCACAGGGCCTGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: AASGLRCGIRPW*SSGASHRAWPR
Trigger: CCTAGGCCAGGCCCTGTGGGATGCGCCACTAGACCACCATGGACGGATCCCACAGCGCAGCCCTGAAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS GCA 72 bp GAGGTGGAGCTGCTGCTAGGCGGGGCCCAGGCCAGATaGCATCTCTCCTTGTGGTGTTCACCTCCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: EVELLLGGAQAR*HLSLWCSPPSS
Trigger: GCTGGAGGGAGGTGAACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCCGCCTAGCAGCAGCTCCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS GCA 72 bp TCGCTTACGGCGCTGGAGCTACTTGTGGGAGGCAGCTaGTGCAGCTTCAGGGCTGCGCTGTGGGATCCGTCC +
Preference number: 6 (lower is better)
Translates to: SLTALELLVGGS*CSFRAALWDPS
Trigger: GGACGGATCCCACAGCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS CCA 72 bp AGAAGGAGGCCTCGCTTACGGCGCTGGAGCTACTTGTaGGAGGCAGCTGCTGCAGCTTCAGGGCTGCGCTGT +
Preference number: 6 (lower is better)
Translates to: RRRPRLRRWSYL*EAAAAASGLRC
Trigger: ACAGCGCAGCCCTGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS CCA 72 bp CTGCAGAGTCCCCTCCTTGGGCATGCTGGGATGCGGTaGCAGCAGCAGGAGTCAGGACACCGGAGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: LQSPLLGHAGMR*QQQESGHRRVR
Trigger: TCTGACTCTCCGGTGTCCTGACTCCTGCTGCTGCCACCGCATCCCAGCATGCCCAAGGAGGGGACTCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475663.2
CDS CAA 90 bp GTGGAGCTGCTGCTAGGCGGGGCCCAGGCCAGATGCCATCTCTCCTaGTGGTGTTCACCTCCCTCCAGCAGCCGTCACTTCCTCATGACA +
Preference number: 6 (lower is better)
Translates to: VELLLGGAQARCHLS*WCSPPSSSRHFLMT
Trigger: TGTCATGAGGAAGTGACGGCTGCTGGAGGGAGGTGAACACCACAAGGAGAGATGGCATCTGGCCTGGGCCCCGCCTAGCAGCAGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS CCA 72 bp GCAGCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: AACRRRRPRLRR*SYLWEAAAAAS
Trigger: TGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS CCA 72 bp GTCTCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: VSCRRRRPRLRR*SYLWEAAAAAS
Trigger: TGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475663.2
CDS CCA 72 bp TTGCCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: LPCRRRRPRLRR*SYLWEAAAAAS
Trigger: TGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488155.1
CDS TCA 72 bp CCCCAGAGGCACTTCTGGAGCCGTGCTCTTCTTGCATaGCTGGCAGGGTGGCAGGAGCGTAGATCTCAGAAA +
Preference number: 6 (lower is better)
Translates to: PQRHFWSRALLA*LAGWQERRSQK
Trigger: TTTCTGAGATCTACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGCCTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS TCA 72 bp GGTTTCACCATGCTGGCCAGAATGGTCTCAATCTCTTaGCCTCGTGACCCGCCCACCTCCCAAAGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: GFTMLARMVSIS*PRDPPTSQSAG
Trigger: CCCAGCACTTTGGGAGGTGGGCGGGTCACGAGGTCAAGAGATTGAGACCATTCTGGCCAGCATGGTGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488155.1
CDS CCA 72 bp TTTCCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTaGAGCTACTTGTGGGAGGCAGCTGCTGCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: FPCRRRRPRLRR*SYLWEAAAAAS
Trigger: TGAAGCTGCAGCAGCTGCCTCCCACAAGTAGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS GCA 72 bp CTTGGTCTTGAAATAGGCCCGGGGATCCTTGGAGCCTaGCAGGCGGATGTGGCAGTACTTCTGGAGGTTAAG +
Preference number: 6 (lower is better)
Translates to: LGLEIGPGILGA*QADVAVLLEVK
Trigger: CTTAACCTCCAGAAGTACTGCCACATCCGCCTGGCAGGCTCCAAGGATCCCCGGGCCTATTTCAAGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS GCA 72 bp GACATTCTCGCCTGTCATCTTCTCGTGACTGTTGGGTaGGAATGTCACCAGCAGGTAGGTACCCACGACAGC +
Preference number: 6 (lower is better)
Translates to: DILACHLLVTVG*ECHQQVGTHDS
Trigger: GCTGTCGTGGGTACCTACCTGCTGGTGACATTCGCACCCAACAGTCACGAGAAGATGACAGGCGAGAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS CAA 90 bp TTGTGCCAGTCAGGGCCATTACTGAACTTCTCTGTCTCAGTCTCCTaGTCTCTTGTAGGAGAAGGAGGCCTCGCTTACGGCGCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: LCQSGPLLNFSVSVS*SLVGEGGLAYGAGA
Trigger: AGCTCCAGCGCCGTAAGCGAGGCCTCCTTCTCCTACAAGAGACAAGGAGACTGAGACAGAGAAGTTCAGTAATGGCCCTGACTGGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475663.2
CDS TCA 72 bp TCCTCTAAGGCCCACCTATCAAAACCTTCTGAGAAATaGCTCGGACTCTTCGTGCAACCCGGAGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: SSKAHLSKPSEK*LGLFVQPGGTA
Trigger: GGCTGTGCCTCCGGGTTGCACGAAGAGTCCGAGTCATTTCTCAGAAGGTTTTGATAGGTGGGCCTTAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000488155.1
CDS GCA 72 bp TACTTCTGGAGGTTAAGTGCAATGCTGACCACGAGGTaGCCGAAGATCGCCAAGAGGGCGCCAATCAGGTTT +
Preference number: 6 (lower is better)
Translates to: YFWRLSAMLTTR*PKIAKRAPIRF
Trigger: AAACCTGATTGGCGCCCTCTTGGCGATCTTCGGGCACCTCGTGGTCAGCATTGCACTTAACCTCCAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS GCA 72 bp GGCTTGACTCAAAAACGCAGCCTGATAGACGGCGGTTaGCACCATGCACACGAACATCACGTAGAAGATGGG +
Preference number: 6 (lower is better)
Translates to: GLTQKRSLIDGG*HHAHEHHVEDG
Trigger: CCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCGTTTTTGAGTCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS GCA 72 bp TGGAGAAGGCAGCCTGATAGACGGCGGTTGCCACCATaGACACGAACATCACGTAGAAGATGGGGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: WRRQPDRRRLPP*TRTSRRRWGSQ
Trigger: TTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCCTTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS GCA 72 bp ATCTGTCTTGGAGAAGGCAGCCTGATAGACGGCGGTTaGCACCATGCACACGAACATCACGTAGAAGATGGG +
Preference number: 6 (lower is better)
Translates to: ICLGEGSLIDGG*HHAHEHHVEDG
Trigger: CCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCCTTCTCCAAGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS CCA 72 bp TCTCCTCAGCTTCACTCAGAGAAGTGCCAATTTCCGTaGCTCTCCCAGGCAGACAGAGAGGGGTGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: SPQLHSEKCQFP*LSQADREGCVF
Trigger: GAAAACACACCCCTCTCTGTCTGCCTGGGAGAGCCACGGAAATTGGCACTTCTCTGAGTGAAGCTGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
ENST00000475663.2
ENST00000488155.1
CDS CCA 72 bp AGAGGCACTTCTGGAGCCGTGCTCTTCTTGCATGACTaGCAGGGTGGCAGGAGCGTAGATCTCAGAAATGTT +
Preference number: 6 (lower is better)
Translates to: RGTSGAVLFLHD*QGGRSVDLRNV
Trigger: AACATTTCTGAGATCTACGCTCCTGCCACCCTGCCAGTCATGCAAGAAGAGCACGGCTCCAGAAGTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS CAA 72 bp CACGTAGAAGATGGGGTAGTCAAGCTGCAGGTTCCCTaGAATGGACAAGACAAGCATCCCAGCCACGGCCTT +
Preference number: 6 (lower is better)
Translates to: HVEDGVVKLQVP*NGQDKHPSHGL
Trigger: AAGGCCGTGGCTGGGATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTTGACTACCCCATCTTCTACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS CAA 90 bp ACGAGGTGCCCGAAGATCGCCAAGAGGGCGCCAATCAGGTTTTCCTaGAATCCAGCCTCTGTCCTTCATGACACTGTGACTCGGACATAT +
Preference number: 6 (lower is better)
Translates to: TRCPKIAKRAPIRFS*NPASVLHDTVTRTY
Trigger: ATATGTCCGAGTCACAGTGTCATGAAGGACAGAGGCTGGATTCAAGGAAAACCTGATTGGCGCCCTCTTGGCGATCTTCGGGCACCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS CAA 90 bp CACGAACATCACGTAGAAGATGGGGTAGTCAAGCTGCAGGTTCCCTaGAATGGACAAGACAAGCATCCCAGCCACGGCCTTGACTGTCAC +
Preference number: 6 (lower is better)
Translates to: HEHHVEDGVVKLQVP*NGQDKHPSHGLDCH
Trigger: GTGACAGTCAAGGCCGTGGCTGGGATGCTTGTCTTGTCCATTCAAGGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS TCA 72 bp GCCCACACTGGCAATCAAAGAGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACGCAGCCTGATAGACGGC +
Preference number: 6 (lower is better)
Translates to: AHTGNQRGVVHL*GLTQKRSLIDG
Trigger: GCCGTCTATCAGGCTGCGTTTTTGAGTCAAGCCTCACAGATGTACGACTCCTCTTTGATTGCCAGTGTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS CCA 72 bp CGGTTGCCACCATGCACACGAACATCACGTAGAAGATaGGGTAGTCAAGCTGCAGGTTCCCTTGAATGGACA +
Preference number: 6 (lower is better)
Translates to: RLPPCTRTSRRR*GSQAAGSLEWT
Trigger: TGTCCATTCAAGGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
ENST00000432012.1
CDS CAA 72 bp CCGAAGATCGCCAAGAGGGCGCCAATCAGGTTTTCCTaGAATCCAGCCTCTGTCCTTCATGACACTGTGACT +
Preference number: 6 (lower is better)
Translates to: PKIAKRAPIRFS*NPASVLHDTVT
Trigger: AGTCACAGTGTCATGAAGGACAGAGGCTGGATTCAAGGAAAACCTGATTGGCGCCCTCTTGGCGATCTTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS CAA 72 bp AGGCTTGACTCAAAAACGCAGCCTGATAGACGGCGGTaGCCACCATGCACACGAACATCACGTAGAAGATGG +
Preference number: 6 (lower is better)
Translates to: RLDSKTQPDRRR*PPCTRTSRRRW
Trigger: CCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCGTTTTTGAGTCAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS CAA 72 bp AATCTGTCTTGGAGAAGGCAGCCTGATAGACGGCGGTaGCCACCATGCACACGAACATCACGTAGAAGATGG +
Preference number: 6 (lower is better)
Translates to: NLSWRRQPDRRR*PPCTRTSRRRW
Trigger: CCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCCTTCTCCAAGACAGATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS CAA 72 bp TCAGGGCCATTACTGAACTTCTCTGTCTCAGTCTCCTaGTCTCTTGTAGGAGAAGGAGGCCTCGCTTACGGC +
Preference number: 6 (lower is better)
Translates to: SGPLLNFSVSVS*SLVGEGGLAYG
Trigger: GCCGTAAGCGAGGCCTCCTTCTCCTACAAGAGACAAGGAGACTGAGACAGAGAAGTTCAGTAATGGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475663.2
CDS CAA 90 bp CAGGTGAAGAATCTGTCTTGGAGAAGGCAGCCTGATAGACGGCGGTaGCCACCATGCACACGAACATCACGTAGAAGATGGGGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: QVKNLSWRRQPDRRR*PPCTRTSRRRWGSQ
Trigger: TTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCCTTCTCCAAGACAGATTCTTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS TCA 72 bp GCCCACACTGGCAATCAAAGAGGAGTCGTACATCTGTaGGGCTTGACTCAAAAACCGGGCATTTCCCTAGAG +
Preference number: 6 (lower is better)
Translates to: AHTGNQRGVVHL*GLTQKPGISLE
Trigger: CTCTAGGGAAATGCCCGGTTTTTGAGTCAAGCCTCACAGATGTACGACTCCTCTTTGATTGCCAGTGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432012.1
CDS GCA 72 bp TCAAAAACGCAGCCTGATAGACGGCGGTTGCCACCATaGACACGAACATCACGTAGAAGATGGGGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: SKTQPDRRRLPP*TRTSRRRWGSQ
Trigger: TTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGTGGCAACCGCCGTCTATCAGGCTGCGTTTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000374399.9
CDS GCA 72 bp GCTTTAAGTTCAGGCTGGACAGTCATCCCTTTATCGTaGATGTTCTGCATACCTGGCATGGCATCCATGGAA +
Preference number: 6 (lower is better)
Translates to: ALSSGWTVIPLS*MFCIPGMASME
Trigger: TTCCATGGATGCCATGCCAGGTATGCAGAACATGCACGATAAAGGGATGACTGTCCAGCCTGAACTTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000003912.7
ENST00000374399.9
CDS TCA 72 bp TCTCTTGTCTTTTGCTTACACATTCCCTTGTCTGTGTaGAGAGCCTGCCTGTTTCTACCAGTGACAGGCATG +
Preference number: 6 (lower is better)
Translates to: SLVFCLHIPLSV*RACLFLPVTGM
Trigger: CATGCCTGTCACTGGTAGAAACAGGCAGGCTCTTCACACAGACAAGGGAATGTGTAAGCAAAAGACAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488155.1
CDS CCA 72 bp GTAACGCCACCAAGAGAAGAATCACGACAATGTTGTTaGCGTTCTTCTCCTTGTAGAAGTAGAGCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: VTPPREESRQCC*RSSPCRSRAAS
Trigger: GCTTGCTGCTCTACTTCTACAAGGAGAAGAACGCCAACAACATTGTCGTGATTCTTCTCTTGGTGGCGTTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000003912.7
ENST00000339255.2
ENST00000358028.8
ENST00000374399.9
CDS TCA 72 bp AATCAGGTTTTCCTTGAATCCAGCCTCTGTCCTTCATaGCACTGTGACTCGGACATATCTTTGGGCATTTGT +
Preference number: 6 (lower is better)
Translates to: NQVFLESSLCPS*HCDSDISLGIC
Trigger: ACAAATGCCCAAAGATATGTCCGAGTCACAGTGTCATGAAGGACAGAGGCTGGATTCAAGGAAAACCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000003912.7
CDS CCA 72 bp GTCTGTTGTGAAGATATGAATCTGGCATGGCATCCATaGAAATATAGGGCTCAAATGGAATGGGCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: VCCEDMNLAWHP*KYRAQMEWASS
Trigger: GGAAGAAGCCCATTCCATTTGAGCCCTATATTTCCATGGATGCCATGCCAGATTCATATCTTCACAACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339255.2