Pregenerated sensors for NIPAL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163293Ensembl transcript IDs: ENST00000295461.10, ENST00000500571.2, ENST00000508180.1, ENST00000511123.1, ENST00000511852.5, ENST00000513724.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTGGCTCACTGCAACCTGCCCCTCCTTGCTTCAAGCAATTCCCTaGCTCAGCCTCCGGGGTAGTTGGGATTATAGGCACCCGCAACCA | + |
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Preference number: 1 (lower is better) Translates to: SWLTATCPSLLQAIP*LSLRGSWDYRHPQP Trigger: TGGTTGCGGGTGCCTATAATCCCAACTACCCCGGAGGCTGAGGCAGGGAATTGCTTGAAGCAAGGAGGGGCAGGTTGCAGTGAGCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295461.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATATTTCACAGAAGAAACTaGAAACGCTCCAATCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: INGCHKRGIKGVQCLVEIFHRRN*KRSNQG Trigger: TCCTTGATTGGAGCGTTTTCAGTTTCTTCTGTGAAA...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| 3UTR-3UTR CCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAAAAGGAAATAAACCCTaGGTCTCTCAATTTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: INGCHKRGIKGVQCLVEIKGNKP*VSQFHF Trigger: GAAATGAAATTGAGAGACCCAGGGTTTATTTCCTTT...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| 3UTR GCA 72 bp | ACTGCAACCTGCCCCTCCTTGCTTCAAGCAATTCCCTaGCTCAGCCTCCGGGGTAGTTGGGATTATAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: TATCPSLLQAIP*LSLRGSWDYRH Trigger: GTGCCTATAATCCCAACTACCCCGGAGGCTGAGGCAGGGAATTGCTTGAAGCAAGGAGGGGCAGGTTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295461.10 |
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| CDS-3UTR GCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATACGGCAGCCTCACCTGTaGCCCCATGGCCCCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEIRQPHL*PHGPGS Trigger: GCTCCCGGGGCCATGGGGGCACAGGTGAGGCTGCCG...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR CCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAAGCCTGGGAGGAGTTTaGACAGACCAGAGACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEISLGGV*TDQRQH Trigger: GTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCT...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAGCTGTGACACATTTGTaGTCTCACACCAAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEIAVTHL*SHTKPG Trigger: CCCAGGCTTGGTGTGAGATCACAAATGTGTCACAGC...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAAGAAGCCAGCAGCTGTaGCACATTTGTGATCTCACA | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEIRSQQL*HICDLT Trigger: TGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCT...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAGCCAATAAAAATACTTaGGCTTACTGCCAGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEIANKNT*AYCQYQ Trigger: TTGGTACTGGCAGTAAGCTCAAGTATTTTTATTGGC...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR TCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAAAGATAATATTGCATTaGCAGCAATCCTACCCACCA | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEIKIILH*QQSYPP Trigger: TGGTGGGTAGGATTGCTGTCAATGCAATATTATCTT...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR GCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATATGCTCAAGTTGTTTATaGTGTAATTCAGGTCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEICSSCL*CNSGPC Trigger: ACACGGACCTGAATTACAGCATAAACAACTTGAGCA...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR GCA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAATTAAAGGTGTCCAGTaGCTTGTTGAGATAGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: INGCHKRGIKGVQCLVEIIKGVQ*LVEIVN Trigger: ATTAACTATCTCAACAAGGCACTGGACACCTTTAAT...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS GCA 90 bp | CCGGTAAAGGCAGGGCCGCGACCTCCTAAAACCCGGTCGCCGCCCTaGAGGAACCTTCCTCACTCGGCCCCTCACACCGGGTTTCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: PVKAGPRPPKTRSPP*RNLPHSAPHTGFPH Trigger: GTGCGGAAACCCGGTGTGAGGGGCCGAGTGAGGAAGGTTCCTGCAGGGCGGCGACCGGGTTTTAGGAGGTCGCGGCCCTGCCTTTACCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS TCA 90 bp | TGCAGGAACCTTCCTCACTCGGCCCCTCACACCGGGTTTCCGCACTaGCCCTCCTTCGCCTCGGTCCTCGCTGCGCTCACCTCCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CRNLPHSAPHTGFPH*PSFASVLAALTSFH Trigger: GTGGAAGGAGGTGAGCGCAGCGAGGACCGAGGCGAAGGAGGGTCAGTGCGGAAACCCGGTGTGAGGGGCCGAGTGAGGAAGGTTCCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS TCA 90 bp | GTACCACTGCAGTTGGTTCCCGGCGGGAGACGCAGGGTCAGTCTGTaGCTCTTCCCCTACCACGCTCCCGCAGAGGCTGAGGAGGCGGTT | + |
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Preference number: 5 (lower is better) Translates to: VPLQLVPGGRRRVSL*LFPYHAPAEAEEAV Trigger: AACCGCCTCCTCAGCCTCTGCGGGAGCGTGGTAGGGGAAGAGTCACAGACTGACCCTGCGTCTCCCGCCGGGAACCAACTGCAGTGGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS CCA 90 bp | GTCTGTTGGGGGCGTGCGCAGTCGGTAAGGAGACGTAGCTTTCCGTaGGGTGTACCACTGCAGTTGGTTCCCGGCGGGAGACGCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VCWGRAQSVRRRSFP*GVPLQLVPGGRRRV Trigger: GACCCTGCGTCTCCCGCCGGGAACCAACTGCAGTGGTACACCCCACGGAAAGCTACGTCTCCTTACCGACTGCGCACGCCCCCAACAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS GCA 90 bp | AGGCGGTTTCGACTTCTCCTCCGGCTTTCTGTCTTCGGCACTGTGTaGTTCTTGCTCCGCGGTTTATTTCTGTACCTAGTCCTCCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RRFRLLLRLSVFGTV*FLLRGLFLYLVLPP Trigger: GGGAGGGAGGACTAGGTACAGAAATAAACCGCGGAGCAAGAAGCACACAGTGCCGAAGACAGAAAGCCGGAGGAGAAGTCGAAACCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS CCA 90 bp | GGAGAAGCCAGCAGCTGTGACACATTTGTGATCTCACACCAAGCCTaGGAGGAGTTTGGACAGACCAGAGACAGCACATATCCTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GEASSCDTFVISHQA*EEFGQTRDSTYPVP Trigger: GGGCACAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508180.1 |
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| CDS CCA 90 bp | GGAGAAGCCAGCAGCTGTGACACATTTGTGATCTCACACCAAGCCTaGGAGGAGTTTGGACAGACCAGAGACAGCACATATCCTTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: GEASSCDTFVISHQA*EEFGQTRDSTYPSR Trigger: CCGAGAAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295461.10 ENST00000511852.5 |
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| CDS CCA 90 bp | GGAGAAGCCAGCAGCTGTGACACATTTGTGATCTCACACCAAGCCTaGGAGGAGTTTGGACAGACCAGAGACAGCACATATCCGGATAAG | + |
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Preference number: 5 (lower is better) Translates to: GEASSCDTFVISHQA*EEFGQTRDSTYPDK Trigger: CTTATCCGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCTGGCTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513724.1 |
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| CDS-3UTR CAA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAAAGCCTGGGAGGAGTTaGGACAGACCAGAGACAGCA | + |
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Preference number: 5 (lower is better) Translates to: INGCHKRGIKGVQCLVEIKPGRS*DRPETA Trigger: TGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTT...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR CAA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAGCTCTAGTAAAGCCCTaGCTGGCCAGTTGCAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: INGCHKRGIKGVQCLVEIALVKP*LASCKR Trigger: CCTCTTGCAACTGGCCAGCAAGGGCTTTACTAGAGC...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR CAA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAGTAAGAATGTCCACCTaGTCCAGCTCTAGTAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: INGCHKRGIKGVQCLVEIVRMST*SSSSKA Trigger: GGCTTTACTAGAGCTGGACAAGGTGGACATTCTTAC...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS-3UTR CAA 90 bp | ATAAATGGGTGTCACAAGAGAGGTATTAAAGGTGTCCAGTGCCTTGTTGAGATAGAAGATAATATTGCATaGACAGCAATCCTACCCACC | + |
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Preference number: 5 (lower is better) Translates to: INGCHKRGIKGVQCLVEIEDNIA*TAILPT Trigger: GGTGGGTAGGATTGCTGTCAATGCAATATTATCTTC...TATCTCAACAAGGCACTGGACACCTTTAATACCTCTCTTGTGACACCCATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511852.5 |
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| CDS GCA 72 bp | GCAGGGCCGCGACCTCCTAAAACCCGGTCGCCGCCCTaGAGGAACCTTCCTCACTCGGCCCCTCACACCGGG | + |
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Preference number: 6 (lower is better) Translates to: AGPRPPKTRSPP*RNLPHSAPHTG Trigger: CCCGGTGTGAGGGGCCGAGTGAGGAAGGTTCCTGCAGGGCGGCGACCGGGTTTTAGGAGGTCGCGGCCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS CAA 72 bp | TCCCTCCCCTCTTCGGTCCATCTCCAAAGCCCGGGCTaGGCGGGGACTCGCCCTCCGGTAAAGGCAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SLPSSVHLQSPG*AGTRPPVKAGP Trigger: CGGCCCTGCCTTTACCGGAGGGCGAGTCCCCGCCAAGCCCGGGCTTTGGAGATGGACCGAAGAGGGGAGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS CCA 72 bp | GGAGACGTAGCTTTCCGTGGGGTGTACCACTGCAGTTaGTTCCCGGCGGGAGACGCAGGGTCAGTCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GDVAFRGVYHCS*FPAGDAGSVCD Trigger: GTCACAGACTGACCCTGCGTCTCCCGCCGGGAACCAACTGCAGTGGTACACCCCACGGAAAGCTACGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS TCA 72 bp | TCTGTGACTCTTCCCCTACCACGCTCCCGCAGAGGCTaGGGAGGCGGTTTCGACTTCTCCTCCGGCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SVTLPLPRSRRG*GGGFDFSSGFL Trigger: CAGAAAGCCGGAGGAGAAGTCGAAACCGCCTCCTCAGCCTCTGCGGGAGCGTGGTAGGGGAAGAGTCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS CCA 72 bp | CACATTTGTGATCTCACACCAAGCCTGGGAGGAGTTTaGACAGACCAGAGACAGCACATATCCTGTGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: HICDLTPSLGGV*TDQRQHISCAP Trigger: GGGGGCACAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508180.1 |
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| CDS CAA 90 bp | TTTCGACTTCTCCTCCGGCTTTCTGTCTTCGGCACTGTGTGCTTCTaGCTCCGCGGTTTATTTCTGTACCTAGTCCTCCCTCCCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRLLLRLSVFGTVCF*LRGLFLYLVLPPLF Trigger: GAAGAGGGGAGGGAGGACTAGGTACAGAAATAAACCGCGGAGCAAGAAGCACACAGTGCCGAAGACAGAAAGCCGGAGGAGAAGTCGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500571.2 ENST00000513724.1 |
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| CDS CCA 72 bp | CACATTTGTGATCTCACACCAAGCCTGGGAGGAGTTTaGACAGACCAGAGACAGCACATATCCTTCTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: HICDLTPSLGGV*TDQRQHISFSA Trigger: TGCCGAGAAGGATATGTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295461.10 ENST00000511852.5 |
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| CDS CCA 72 bp | AGCAGCTGTGACACATTTGTGATCTCACACCAAGCCTaGGAGGAGTTTGGACAGACCAGAGACAGCACATAT | + |
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Preference number: 6 (lower is better) Translates to: SSCDTFVISHQA*EEFGQTRDSTY Trigger: ATATGTGCTGTCTCTGGTCTGTCCAAACTCCTCCCAGGCTTGGTGTGAGATCACAAATGTGTCACAGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295461.10 ENST00000508180.1 ENST00000511852.5 ENST00000513724.1 |
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| CDS CAA 90 bp | CTGCCAGTACCAAGCCCACATAAAGACTGTATTTGTTTTCTACATTaGCTGAAATGCTCAAGTTGTTTATGCTGTAATTCAGGTCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: LPVPSPHKDCICFLH*LKCSSCLCCNSGPC Trigger: ACACGGACCTGAATTACAGCATAAACAACTTGAGCATTTCAGCAAATGTAGAAAACAAATACAGTCTTTATGTGGGCTTGGTACTGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295461.10 ENST00000508180.1 ENST00000511123.1 ENST00000511852.5 |
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| CDS GCA 72 bp | TGTTTTCTACATTTGCTGAAATGCTCAAGTTGTTTATaGTGTAATTCAGGTCCGTGTAGAGCACAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CFLHLLKCSSCL*CNSGPCRAQEK Trigger: CTTCTCCTGTGCTCTACACGGACCTGAATTACAGCATAAACAACTTGAGCATTTCAGCAAATGTAGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295461.10 ENST00000508180.1 ENST00000511123.1 ENST00000511852.5 |
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