RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIPA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170113, ENSG00000288478

Ensembl transcript IDs: ENST00000337435.9, ENST00000437912.6, ENST00000557930.1, ENST00000559448.5, ENST00000560069.5, ENST00000560105.1, ENST00000561183.5, ENST00000673033.1, ENST00000673341.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCATCGAGCAGGTGTCAGGTCGAAGCGGCACAACGGGAGGGGCTCTaGGAACCACCGGAGTACTCTCTCCCCTCTTCTGGGTTAGCTGAG +
Preference number: 1 (lower is better)
Translates to: ASSRCQVEAAQREGL*EPPEYSLPSSGLAE
Trigger: CTCAGCTAACCCAGAAGAGGGGAGAGAGTACTCCGGTGGTTCCCAGAGCCCCTCCCGTTGTGCCGCTTCGACCTGACACCTGCTCGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 90 bp ACCGAGGAGTCGAAGCACTCCAGCGCCTTGTTGATGTACCTGAACTaGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGGCAC +
Preference number: 1 (lower is better)
Translates to: TEESKHSSALLMYLN*TMMLQPSTARSTRH
Trigger: GTGCCTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR CCA 90 bp CGCATGAGGCTGTGTGTCCTACAGCATGGTCCTGAGCAGACTCCATaGTCCGTGCAAGCGGAGTTTCCACTGTGCCACTCCCAGGCACTT +
Preference number: 1 (lower is better)
Translates to: RMRLCVLQHGPEQTP*SVQAEFPLCHSQAL
Trigger: AAGTGCCTGGGAGTGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 90 bp GTGCCCATCACACCTGTTTCCACGGACCAGGTGTCCGTGCACACCTaGGAGACACTGCATCTCCAAAGTCTAGAACTGGCCCCTAGAAGT +
Preference number: 1 (lower is better)
Translates to: VPITPVSTDQVSVHT*ETLHLQSLELAPRS
Trigger: ACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCGTGGAAACAGGTGTGATGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 90 bp TTTGCTTTCTCAGCGCATGAGGCTGTGTGTCCTACAGCATGGTCCTaGGCAGACTCCATGGTCCGTGCAAGCGGAGTTTCCACTGTGCCA +
Preference number: 1 (lower is better)
Translates to: FAFSAHEAVCPTAWS*ADSMVRASGVSTVP
Trigger: TGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 90 bp TGGTCCCTGAGAAGGCAAAACACCAAGACTCCATCCAATCCCGCCTaGTGGACGAACAACGCCCTCGGTGTCAGACACCATGAAAAGAAC +
Preference number: 1 (lower is better)
Translates to: WSLRRQNTKTPSNPA*WTNNALGVRHHEKN
Trigger: GTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCCTTCTCAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 90 bp CAATCCCGCCTGATGGACGAACAACGCCCTCGGTGTCAGACACCATaGAAAGAACAACTTCAGAACACGGAAGCTAATCCATGCTGTCGG +
Preference number: 1 (lower is better)
Translates to: QSRLMDEQRPRCQTP*KEQLQNTEANPCCR
Trigger: CCGACAGCATGGATTAGCTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 90 bp GTTAATGGAAATGAAAATGAGATTCGTCTCATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: VNGNENEIRLIRERW*QATVGDVWAAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTTTCATTTCCATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR CCA 90 bp CAGGTTAATGGAAATGAAAATGAGATTCGTCTCATCAGAGAGAGATaGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: QVNGNENEIRLIRER*CQATVGDVWAAEGW
Trigger: CCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTTTCATTTCCATTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR TCA 90 bp TCATGCAAACTTTACACCCAGCACTTCCTTTGCTTTCTCAGCGCATaGGGCTGTGTGTCCTACAGCATGGTCCTGAGCAGACTCCATGGT +
Preference number: 1 (lower is better)
Translates to: SCKLYTQHFLCFLSA*GCVSYSMVLSRLHG
Trigger: ACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 90 bp AACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGTaGGGTCACATGCTGTACAGGTGTGTGGCCCAGGAGCAACAGGCT +
Preference number: 1 (lower is better)
Translates to: NTNTHHCVTIACGIQ*GHMLYRCVAQEQQA
Trigger: AGCCTGTTGCTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 90 bp CAGAACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTaGAATGTTCTCTTTCTAGTTTCCTGCTTGGTGGCAGGAAGCCTA +
Preference number: 1 (lower is better)
Translates to: QNTEANPCCREQTLH*NVLFLVSCLVAGSL
Trigger: TAGGCTTCCTGCCACCAAGCAGGAAACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 90 bp ACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATaGCTATTCCTCGAACCATCCAAGCTCCTATTGCAATCTAGTCTG +
Preference number: 1 (lower is better)
Translates to: TSSTSHPITARNHLQ*LFLEPSKLLLQSSL
Trigger: CAGACTAGATTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR TCA 90 bp CTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATaGTCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: LSTRPPVTIQSILTP*SRTSSTSHPITARN
Trigger: GTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR TCA 90 bp TGGGAGACACTGCATCTCCAAAGTCTAGAACTGGCCCCTAGAAGTTaGGCACAACATTTACAAAGAGCTGAGTCATCTAGGAAGAAGGAA +
Preference number: 1 (lower is better)
Translates to: WETLHLQSLELAPRS*AQHLQRAESSRKKE
Trigger: TTCCTTCTTCCTAGATGACTCAGCTCTTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 90 bp GAAGTACATGATACCGTGGTGAAATATGTGCATCACTTCATGCTATaGTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAA +
Preference number: 1 (lower is better)
Translates to: EVHDTVVKYVHHFML*SHLEHMDGNTIDRE
Trigger: TTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGTATCATGTACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR GCA 90 bp GCTGCTTGGAAGCAGGAAGTTCAGCGTCATTTATTACAAATCCAGTaGAACAGAATCCACGTGTTTCACAGGCCATTAAATCTTTTTCAG +
Preference number: 1 (lower is better)
Translates to: AAWKQEVQRHLLQIQ*NRIHVFHRPLNLFQ
Trigger: CTGAAAAAGATTTAATGGCCTGTGAAACACGTGGATTCTGTTGCACTGGATTTGTAATAAATGACGCTGAACTTCCTGCTTCCAAGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 90 bp GAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTaGAATCTAGTCTGTTTTCATATTAGATTTGTTCATCTCCCCAAG +
Preference number: 1 (lower is better)
Translates to: ETTSNAYSSNHPSSY*NLVCFHIRFVHLPK
Trigger: CTTGGGGAGATGAACAAATCTAATATGAAAACAGACTAGATTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR TCA 90 bp TTGTGGTGCTGGGTTAGGGTTAGAATCCTTAATTGGCCCTACCTTTaGTCAATGAGCAGAACAGGAAGCAATCCTTTCAAATGCAAATAT +
Preference number: 1 (lower is better)
Translates to: LWCWVRVRILNWPYL*SMSRTGSNPFKCKY
Trigger: ATATTTGCATTTGAAAGGATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATTAAGGATTCTAACCCTAACCCAGCACCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 90 bp CAACATGCTATGACTACATCTATAAAGCAAAATATAAGCAGGTCTTaGCCACTGACACATGTGTCTATGTATGCTAATTGGAAGCTCCCC +
Preference number: 1 (lower is better)
Translates to: QHAMTTSIKQNISRS*PLTHVSMYANWKLP
Trigger: GGGGAGCTTCCAATTAGCATACATAGACACATGTGTCAGTGGCCAAGACCTGCTTATATTTTGCTTTATAGATGTAGTCATAGCATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 90 bp ATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGGATaGGAACACTATAGACAGAGAATGACCTCTTTGATTCAAATACTG +
Preference number: 1 (lower is better)
Translates to: ICASLHAMLPFGTHG*EHYRQRMTSLIQIL
Trigger: CAGTATTTGAATCAAAGAGGTCATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 90 bp ATTGTGTCCTTTAACTTGTTCCTGTATGACAGGGTACTCGATATATaGGCTATTGAACAGGTACTCTCCCACTTAGCCTTATTATCAAGT +
Preference number: 1 (lower is better)
Translates to: IVSFNLFLYDRVLDI*AIEQVLSHLALLSS
Trigger: ACTTGATAATAAGGCTAAGTGGGAGAGTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAAAGGACACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 90 bp AATAATGTTGTTGCTGCTCTCAGTTCACAAATCACTGACAACCCATaGTCATCATGTACACGTTTACTCCATAAAGGTATTTTTCTCTCT +
Preference number: 1 (lower is better)
Translates to: NNVVAALSSQITDNP*SSCTRLLHKGIFLS
Trigger: AGAGAGAAAAATACCTTTATGGAGTAAACGTGTACATGATGATCATGGGTTGTCAGTGATTTGTGAACTGAGAGCAGCAACAACATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 90 bp GTTAATAATTCAAGTGATAAAGGCACTGAAATTGATTTGAGCTATTaGAAAGTCATCCTGCCAGTGGAACACTACCTCATGTTCATTAAC +
Preference number: 1 (lower is better)
Translates to: VNNSSDKGTEIDLSY*KVILPVEHYLMFIN
Trigger: GTTAATGAACATGAGGTAGTGTTCCACTGGCAGGATGACTTTTCAATAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAATTATTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 90 bp ATTTCCCACAAAAGCTGTAGCAACACAAACATGATCATTTTCATGTaGCACATGAACTTTCTCATTACACTTGTTAGCCACATGTATTCT +
Preference number: 1 (lower is better)
Translates to: ISHKSCSNTNMIIFM*HMNFLITLVSHMYS
Trigger: AGAATACATGTGGCTAACAAGTGTAATGAGAAAGTTCATGTGTCACATGAAAATGATCATGTTTGTGTTGCTACAGCTTTTGTGGGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp TGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACGGTGAAAACCGTTGGGGACGTTTaGGCTGCAGAGGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: CKMSWAASPMPLVEGTVKTVGDV*AAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGT...TTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CCA 90 bp GGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCAATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 2 (lower is better)
Translates to: GCYARCLGPPARCPWWKAMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...TGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR CAA 90 bp GACGGGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTaGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: DGLLCKMSWAASPMP*VEGTVKLPSKEQML
Trigger: CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR CAA 90 bp CAGGCAGAGGGCTCTCTGACTGGACGGGTTGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACGGTGAAACT +
Preference number: 2 (lower is better)
Translates to: QAEGSLTGRVVMQDV*GRQPDALGGRHGET
Trigger: AGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CCA 90 bp GAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGCTGCAGAGGGCTGGCTaGGCCTCTGCTCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: EIRLIRERWCQATVGDVWLQRAG*ASALVL
Trigger: CAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG...CCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR CCA 90 bp GCTGATGTAGACCATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGAAGATGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: ADVDHDVGGPMGRRDPEDVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...ATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CCA 90 bp GGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGTCAGACTTTGGGGAGTaGATAATCAGCACGACGGAG +
Preference number: 2 (lower is better)
Translates to: GPWAGAIQKMSSSSMSSTSDFGE*IISTTE
Trigger: CTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGA...CGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR CCA 90 bp GCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGATGTAATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ALGGRHGETAQQGADADVMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...TACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR GCA 90 bp GATGTACCTGAACTGGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGTCTGGTGCTGAGCCATaGTCCCCGCTATCCACCAGA +
Preference number: 2 (lower is better)
Translates to: DVPELDDDAAAEHGQEYQSGAEP*SPLSTR
Trigger: TCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA...CTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR CAA 90 bp AAAATGAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: KMRFVSSERDGARQP*GTFGLQRAGWASAL
Trigger: CAGAGCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR TCA 90 bp GTGGGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: VGPWAGAIQKMSSSSMSSTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...GCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR TCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 2 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR TCA 90 bp CAGGACCAGCGTGGTAAACACGACGTAGTAGATGGCCCCGAACACCGAGGAGTCTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 2 (lower is better)
Translates to: QDQRGKHDVVDGPEHRGVSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...GACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGTTTACCACGCTGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR GCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGTCTGGTGCTGAGCCATaGTCCCCGCTATCCACCAGA +
Preference number: 2 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSSGAEP*SPLSTR
Trigger: TCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR GCA 90 bp GATGTACCTGAACTGGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: DVPELDDDAAAEHGQEYQIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...CTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CCA 90 bp GAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: EIRLIRERWCQATVGDVWVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...CCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR CCA 90 bp GCCAGCCCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGGTAGCCCACAAACACTaGATTGGTCAGCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: ASPMPLVEGTVKLPSKEQVAHKH*IGQLFL
Trigger: GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTAC...CTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR TCA 90 bp AGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCTCAATTCTAACACCATaGTCGAGGACCTCTTCTACT +
Preference number: 2 (lower is better)
Translates to: RWCQATVGDVWAAEGWLGSILTP*SRTSST
Trigger: AGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGA...GCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR GCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGTCTGGTGCTGAGCCATaGTCCCCGCTATCCACCAGA +
Preference number: 2 (lower is better)
Translates to: SAECQEHITPSEGDLSVRSGAEP*SPLSTR
Trigger: TCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCGGGGCTTTGTGGTGCTaGGTTAGGGTTAGAATCCTT +
Preference number: 2 (lower is better)
Translates to: VSTVPLPGTSEHGALISGGALWC*VRVRIL
Trigger: AAGGATTCTAACCCTAACCCAGCACCACAAAGCCCC...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp GGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACACACTCTCAGACTTTaGGGAGTGGATAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: GCYARCLGPPARCPWWKAHTLRL*GVDNQH
Trigger: GTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTG...TGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR TCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR CCA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGCTGCAGAGGGCTGGCTaGGCCTCTGCTCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMLQRAG*ASALVL
Trigger: CAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATCCGGAAGAGGATGGCTaGGGCCAGCAGGACCAGCGT +
Preference number: 2 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYPEEDG*GQQDQR
Trigger: ACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGG...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACACCGTTGGGGACGTTTaGGCTGCAGAGGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHTVGDV*AAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGT...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR CCA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR TCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGCCTACCTTTGATCAATaGGCAGAACAGGAAGCAATC +
Preference number: 2 (lower is better)
Translates to: SAECQEHITPSEGDLSVRPTFDQ*AEQEAI
Trigger: GATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGG...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTCTGCAGAGGGCTGGCTaGGCCTCTGCTCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFLQRAG*ASALVL
Trigger: CAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGCGATATATGAGCTATTaGACAGGTACTCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: SAECQEHITPSEGDLSVRRYMSY*TGTLPL
Trigger: AAGTGGGAGAGTACCTGTTCAATAGCTCATATATCG...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR GCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGAGGATGCTCTGCCATTaGAAACAACAAGGAGATGGC +
Preference number: 2 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWRMLCH*KQQGDG
Trigger: GCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACTTATGCAAGATGTCTTaGGCCGCCAGCCCGATGCCC +
Preference number: 2 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHLCKMS*AASPMP
Trigger: GGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAA...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR TCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGTTGACTATCTTCCAGTaGATATACAGTCATGAACCA +
Preference number: 2 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSLTIFQ*IYSHEP
Trigger: TGGTTCATGACTGTATATTCACTGGAAGATAGTCAA...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR TCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGGATCTCAATGAGAGCTaGGCAAGGCCACCAGAATAC +
Preference number: 2 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKDLNES*ARPPEY
Trigger: GTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATC...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR TCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGAGGAAAAGATCTCAATaGGAGCTGAGCAAGGCCACC +
Preference number: 2 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKRKRSQ*ELSKAT
Trigger: GGTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCT...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 90 bp CTAAAGCTTCATGGAATCATGCAAACTTTACACCCAGCACTTCCTTaGCTTTCTCAGCGCATGAGGCTGTGTGTCCTACAGCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: LKLHGIMQTLHPALP*LSQRMRLCVLQHGP
Trigger: AGGACCATGCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGATTCCATGAAGCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR GCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACTGGGGACGTTTGGGCTaGAGAGGGCTGGCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYWGRLG*RGLAGP
Trigger: AGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCA...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR GCA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGTGTGTTACAATTGCCTaGGGTATTCAGTGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLCVTIA*GIQCGH
Trigger: GTGACCGCACTGAATACCGCAGGCAATTGTAACACA...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp ACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAGCCTGCACAGCTTGAAGCTAAAATGGACTaGGATTCCAAGTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: TLSDFGEWIISTTEPAQLEAKMD*DSKLKT
Trigger: TGTCTTCAACTTGGAATCCCAGTCCATTTTAGCTTC...AAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557930.1
3UTR-3UTR TCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGAATTGGCCCTACCTTTaGTCAATGAGCAGAACAGGA +
Preference number: 2 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKNWPYL*SMSRTG
Trigger: TCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATT...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR TCA 90 bp GAATATACAGTCATGAACCACGTAACCATGTTTCTGTCAAAGACATACCACTTATGGTGGAAGGCACGGTaGAACTGCCCAGCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: EYTVMNHVTMFLSKTYHLWWKAR*NCPARS
Trigger: GCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCA...TAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR GCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR GCA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTACATTCACTGTACAGTaGCAGAGTTCAAGACAACAA +
Preference number: 2 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQATFTVQ*QSSRQQ
Trigger: TTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGT...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR CCA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGAAGTCATCCTGCCAGTaGAACACTACCTCATGTTCA +
Preference number: 2 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLKSSCQ*NTTSCS
Trigger: TGAACATGAGGTAGTGTTCCACTGGCAGGATGACTT...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTACCATCTGGCCTGGGTaGGTCATAGGTGTCCCATCT +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFTIWPG*VIGVPS
Trigger: AGATGGGACACCTATGACCCACCCAGGCCAGATGGT...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGCCCCATCTTTCAACTTaGCGTAGTTCCCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMPHLST*RSSLLR
Trigger: TCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGG...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR GCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACAGAAACCACCTCCAATaGCTATTCCTCGAACCATCC +
Preference number: 2 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHRNHLQ*LFLEPS
Trigger: GGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCT...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR GCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR GCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACGCCTGCGGTATTCAGTaGGGTCACATGCTGTACAGG +
Preference number: 2 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYACGIQ*GHMLYR
Trigger: CCTGTACAGCATGTGACCGCACTGAATACCGCAGGC...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACCTCATCAGAGAGAGATaGTGCCAGGCAACCGTTGGG +
Preference number: 2 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYLIRER*CQATVG
Trigger: CCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAG...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTTGCTATGCTCCCATTTaGAACACATGGATGGGAACA +
Preference number: 2 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSCYAPI*NTWMGT
Trigger: TGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCA...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTTCAGACTTTGGGGAGTaGATAATCAGCACGACGGAG +
Preference number: 2 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISSDFGE*IISTTE
Trigger: CTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGA...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTCCCCATCTTTCAACTTaGCGTAGTTCCCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFPHLST*RSSLLR
Trigger: TCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGG...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGAGGGTACTCGATATATaGGCTATTGAACAGGTACTC +
Preference number: 2 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMRVLDI*AIEQVL
Trigger: GAGTACCTGTTCAATAGCTCATATATCGAGTACCCT...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGAAGAGTAATGGACTTTaGGCATTTGTTAACCATCCA +
Preference number: 2 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLKSNGL*AFVNHP
Trigger: TGGATGGTTAACAAATGCTCAAAGTCCATTACTCTT...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR GCA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTACATTCACTGTACAGTaGCAGAGTTCAAGACAACAA +
Preference number: 2 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSTFTVQ*QSSRQQ
Trigger: TTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGT...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR TCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTCAATTCTAACACCATaGTCGAGGACCTCTTCTACT +
Preference number: 2 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYSILTP*SRTSST
Trigger: AGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGA...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCATTGATTTGAGCTATTaGAAAGTCATCCTGCCAGTG +
Preference number: 2 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSIDLSY*KVILPV
Trigger: CACTGGCAGGATGACTTTTCAATAGCTCAAATCAAT...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATCGATATATGAGCTATTaGACAGGTACTCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYRYMSY*TGTLPL
Trigger: AAGTGGGAGAGTACCTGTTCAATAGCTCATATATCG...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTTGCTATGCTCCCATTTaGAACACATGGATGGGAACA +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFCYAPI*NTWMGT
Trigger: TGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCA...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR CAA 90 bp TTCATATTAGATTTGTTCATCTCCCCAAGGTTGAAATTGAACTCTTaGAACACCTGTATAAGGACAATCCCCACGGAGACGGTCGTGAAT +
Preference number: 2 (lower is better)
Translates to: FILDLFISPRLKLNS*NTCIRTIPTETVVN
Trigger: ATTCACGACCGTCTCCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATCTAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR TCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTTCAATTCTAACACCATaGTCGAGGACCTCTTCTACT +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFSILTP*SRTSST
Trigger: AGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGA...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR TCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTGAATGTGGATATATTTaGTACTGGATCCCAGGTAAC +
Preference number: 2 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFECGYI*YWIPGN
Trigger: GTTACCTGGGATCCAGTATCAAATATATCCACATTC...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR GCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACAGGATGCTCTGCCATTaGAAACAACAAGGAGATGGC +
Preference number: 2 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYRMLCH*KQQGDG
Trigger: GCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CCA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGCAAACAACAAGGAGATaGCTACATTTATTGGCTTTT +
Preference number: 2 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMQTTRR*LHLLAF
Trigger: AAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTG...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR CAA 90 bp CTGGAAAGACAACTGGGTGTAGTAAATTGGCTTGAAGAGCAGGAATaGAAAGAATATTCCTTATTGCTGAACAAAGAGCTGCGAAGTATA +
Preference number: 2 (lower is better)
Translates to: LERQLGVVNWLEEQE*KEYSLLLNKELRSI
Trigger: TATACTTCGCAGCTCTTTGTTCAGCAATAAGGAATATTCTTTCAATTCCTGCTCTTCAAGCCAATTTACTACACCCAGTTGTCTTTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR TCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACATCACTGACAACCCATaGTCATCATGTACACGTTTA +
Preference number: 2 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYITDNP*SSCTRL
Trigger: TAAACGTGTACATGATGATCATGGGTTGTCAGTGAT...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 72 bp AGGTGTCAGGTCGAAGCGGCACAACGGGAGGGGCTCTaGGAACCACCGGAGTACTCTCTCCCCTCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: RCQVEAAQREGL*EPPEYSLPSSG
Trigger: CCCAGAAGAGGGGAGAGAGTACTCCGGTGGTTCCCAGAGCCCCTCCCGTTGTGCCGCTTCGACCTGACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp CAGGCCCACGTTGCTCCACTCCCGGAAGAGGATGGCTaGGGCCAGCAGGACCAGCGTGGTAAACACGACGTA +
Preference number: 3 (lower is better)
Translates to: QAHVAPLPEEDG*GQQDQRGKHDV
Trigger: TACGTCGTGTTTACCACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGTGGAGCAACGTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR CCA 72 bp TCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: SSHQREMVPGNR*GRLGCRGLAGP
Trigger: AGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR-3UTR CAA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSGARQP*GTFGLQ
Trigger: CTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACC...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CAA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: VSTVPLPGTSEHGALISGGARQP*GTFGLQ
Trigger: CTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACC...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CAA 90 bp CCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATGCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 3 (lower is better)
Translates to: PWAGAIQKMSSSSMSSTMPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...CATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR CAA 90 bp CCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: PMPLVEGTVKLPSKEQMLPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR TCA 72 bp TCAGCGCATGAGGCTGTGTGTCCTACAGCATGGTCCTaGGCAGACTCCATGGTCCGTGCAAGCGGAGTTTCC +
Preference number: 3 (lower is better)
Translates to: SAHEAVCPTAWS*ADSMVRASGVS
Trigger: GGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 72 bp CAGGTGTGTGGCCCAGGAGCAACAGGCTGTACCATCTaGCCTGGGTGGGTCATAGGTGTCCCATCTAGGTTT +
Preference number: 3 (lower is better)
Translates to: QVCGPGATGCTI*PGWVIGVPSRF
Trigger: AAACCTAGATGGGACACCTATGACCCACCCAGGCCAGATGGTACAGCCTGTTGCTCCTGGGCCACACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR CCA 72 bp CTGTGTGTCCTACAGCATGGTCCTGAGCAGACTCCATaGTCCGTGCAAGCGGAGTTTCCACTGTGCCACTCC +
Preference number: 3 (lower is better)
Translates to: LCVLQHGPEQTP*SVQAEFPLCHS
Trigger: GGAGTGGCACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGGACACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 72 bp TCGAAGCACTCCAGCGCCTTGTTGATGTACCTGAACTaGACGATGATGCTGCAGCCGAGCACGGCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: SKHSSALLMYLN*TMMLQPSTARS
Trigger: ACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR CCA 72 bp ACACCTGTTTCCACGGACCAGGTGTCCGTGCACACCTaGGAGACACTGCATCTCCAAAGTCTAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: TPVSTDQVSVHT*ETLHLQSLELA
Trigger: GGCCAGTTCTAGACTTTGGAGATGCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCGTGGAAACAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CAA 90 bp CCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 3 (lower is better)
Translates to: PMGRRDPEDEQQQHEQHDNLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...ATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR GCA 72 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATaGTGTACAGGTGTGTGGCCCAGGAGCAACAGGCTG +
Preference number: 3 (lower is better)
Translates to: VLQLPAVFSAVT*CTGVWPRSNRL
Trigger: CAGCCTGTTGCTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR CCA 72 bp CTCCAGCTCAGCCTGAGTTGTCACACTCTCAGACTTTaGGGAGTGGATAATCAGCACGACGGAGCCTGCACA +
Preference number: 3 (lower is better)
Translates to: LQLSLSCHTLRL*GVDNQHDGACT
Trigger: TGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR TCA 72 bp AGAAGGCAAAACACCAAGACTCCATCCAATCCCGCCTaGTGGACGAACAACGCCCTCGGTGTCAGACACCAT +
Preference number: 3 (lower is better)
Translates to: RRQNTKTPSNPA*WTNNALGVRHH
Trigger: ATGGTGTCTGACACCGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp CAACATGACCCTTTGGCACTAGTGGTTTGGGAGCCCTaGCATTCGCCTGGTGTCAGTTCAGCATCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: QHDPLALVVWEP*HSPGVSSASGL
Trigger: CAACCCTGATGCTGAACTGACACCAGGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAAAGGGTCATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 72 bp ACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGTaGGGTCACATGCTGTACAGGTGTGTGGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: THHCVTIACGIQ*GHMLYRCVAQE
Trigger: CTCCTGGGCCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACACAGTGGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CAA 90 bp GCTGATGTAGACCATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGAAGATGACTGGGATTCCAAGTaGAAGACAGGCTTTTTATCC +
Preference number: 3 (lower is better)
Translates to: ADVDHDVGGPMGRRDPEDDWDSK*KTGFLS
Trigger: GGATAAAAAGCCTGTCTTCAACTTGGAATCCCAGTC...ATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557930.1
3UTR-3UTR CAA 90 bp GGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCAAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 3 (lower is better)
Translates to: GCYARCLGPPARCPWWKANLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...TGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR CAA 90 bp GGAGTCGAAGCACTCCAGCGCCTTGTTGATGTACCTGAACTGGACGATGATGCTCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 3 (lower is better)
Translates to: GVEALQRLVDVPELDDDAPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...AGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR TCA 72 bp CTTTACACCCAGCACTTCCTTTGCTTTCTCAGCGCATaGGGCTGTGTGTCCTACAGCATGGTCCTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: LYTQHFLCFLSA*GCVSYSMVLSR
Trigger: TCTGCTCAGGACCATGCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CAA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGATGCTATGCTCCCATTaGGAACACATGGATGGGAAC +
Preference number: 3 (lower is better)
Translates to: SAECQEHITPSEGDLSVRMLCSH*EHMDGN
Trigger: GTTCCCATCCATGTGTTCCAAATGGGAGCATAGCAT...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CAA 90 bp AGCCTGAGTTGTCACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 3 (lower is better)
Translates to: SLSCHTLRLWGVDNQHDGSRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...TCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
3UTR-3UTR CAA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 3 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQASRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR-3UTR CAA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQGARQP*GTFGLQ
Trigger: CTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACC...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR-3UTR CAA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGTCGATATATGAGCTATaGAACAGGTACTCTCCCACT +
Preference number: 3 (lower is better)
Translates to: SAECQEHITPSEGDLSVRSIYEL*NRYSPT
Trigger: AGTGGGAGAGTACCTGTTCAATAGCTCATATATCGA...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 72 bp ACTTCACATCCAATCACGGCCAGAAACCACCTCCAATaGCTATTCCTCGAACCATCCAAGCTCCTATTGCAA +
Preference number: 3 (lower is better)
Translates to: TSHPITARNHLQ*LFLEPSKLLLQ
Trigger: TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR GCA 72 bp CATTCGCCTGGTGTCAGTTCAGCATCAGGGTTGAGCTaGTTGGAAGCAGGAAGTTCAGCGTCATTTATTACA +
Preference number: 3 (lower is better)
Translates to: HSPGVSSASGLS*LEAGSSASFIT
Trigger: TGTAATAAATGACGCTGAACTTCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACTGACACCAGGCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR-3UTR CAA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR TCA 72 bp ACACGGTGCTCTCATCTCAGGCCACCAGAACACTGCTaGAAGTGCCGGTGTTTTAGAAACAATTTGAAGAAC +
Preference number: 3 (lower is better)
Translates to: TRCSHLRPPEHC*KCRCFRNNLKN
Trigger: GTTCTTCAAATTGTTTCTAAAACACCGGCACTTTCAGCAGTGTTCTGGTGGCCTGAGATGAGAGCACCGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp CTGCATCTCCAAAGTCTAGAACTGGCCCCTAGAAGTTaGGCACAACATTTACAAAGAGCTGAGTCATCTAGG +
Preference number: 3 (lower is better)
Translates to: LHLQSLELAPRS*AQHLQRAESSR
Trigger: CCTAGATGACTCAGCTCTTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAGTTCTAGACTTTGGAGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 72 bp GTAAACACAAATACTCACCACTGTGTTACAATTGCCTaGGGTATTCAGTGCGGTCACATGCTGTACAGGTGT +
Preference number: 3 (lower is better)
Translates to: VNTNTHHCVTIA*GIQCGHMLYRC
Trigger: ACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 72 bp AGACCACCTGTTACTATCCAGTCAATTCTAACACCATaGTCGAGGACCTCTTCTACTTCACATCCAATCACG +
Preference number: 3 (lower is better)
Translates to: RPPVTIQSILTP*SRTSSTSHPIT
Trigger: CGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR TCA 72 bp ACTAACATTCTGATAGGAAAAGATCTCAATGAGAGCTaGGCAAGGCCACCAGAATACCAAATTCCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: TNILIGKDLNES*ARPPEYQIPPQ
Trigger: TTGGGGAGGAATTTGGTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCTATCAGAATGTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 72 bp GATACCGTGGTGAAATATGTGCATCACTTCATGCTATaGTCCCATTTGGAACACATGGATGGGAACACTATA +
Preference number: 3 (lower is better)
Translates to: DTVVKYVHHFML*SHLEHMDGNTI
Trigger: TATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 72 bp GATAAAACACTGGCCATGAAGTACATGATACCGTGGTaGAATATGTGCATCACTTCATGCTATGCTCCCATT +
Preference number: 3 (lower is better)
Translates to: DKTLAMKYMIPW*NMCITSCYAPI
Trigger: AATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGTATCATGTACTTCATGGCCAGTGTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 72 bp TGGGTTAGGGTTAGAATCCTTAATTGGCCCTACCTTTaGTCAATGAGCAGAACAGGAAGCAATCCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: WVRVRILNWPYL*SMSRTGSNPFK
Trigger: TTTGAAAGGATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATTAAGGATTCTAACCCTAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CCA 72 bp TCACTTCATGCTATGCTCCCATTTGGAACACATGGATaGGAACACTATAGACAGAGAATGACCTCTTTGATT +
Preference number: 3 (lower is better)
Translates to: SLHAMLPFGTHG*EHYRQRMTSLI
Trigger: AATCAAAGAGGTCATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 72 bp TTTAACTTGTTCCTGTATGACAGGGTACTCGATATATaGGCTATTGAACAGGTACTCTCCCACTTAGCCTTA +
Preference number: 3 (lower is better)
Translates to: FNLFLYDRVLDI*AIEQVLSHLAL
Trigger: TAAGGCTAAGTGGGAGAGTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
3UTR TCA 72 bp GGCTGGTGTCACGTGCTTGAAAAACAATGGATGATATaGACTTTGTTTCACTGGAAGAAAAGCTATGTATCC +
Preference number: 3 (lower is better)
Translates to: GWCHVLEKQWMI*TLFHWKKSYVS
Trigger: GGATACATAGCTTTTCTTCCAGTGAAACAAAGTTCATATCATCCATTGTTTTTCAAGCACGTGACACCAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp GGGTTAGAATCCTTAATTGGCCCTACCTTTGATCAATaGGCAGAACAGGAAGCAATCCTTTCAAATGCAAAT +
Preference number: 3 (lower is better)
Translates to: GLESLIGPTFDQ*AEQEAILSNAN
Trigger: ATTTGCATTTGAAAGGATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATTAAGGATTCTAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR GCA 72 bp CAAACTAACACAACTACAGACACATTCACTGTACAGTaGCAGAGTTCAAGACAACAATCTCTCATTCCCAAA +
Preference number: 3 (lower is better)
Translates to: QTNTTTDTFTVQ*QSSRQQSLIPK
Trigger: TTTGGGAATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTTAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
3UTR GCA 72 bp AAGCAGGAAGTTCAGCGTCATTTATTACAAATCCAGTaGAACAGAATCCACGTGTTTCACAGGCCATTAAAT +
Preference number: 3 (lower is better)
Translates to: KQEVQRHLLQIQ*NRIHVFHRPLN
Trigger: ATTTAATGGCCTGTGAAACACGTGGATTCTGTTGCACTGGATTTGTAATAAATGACGCTGAACTTCCTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp ACTTCTGGAAAGACAACTGGGTGTAGTAAATTGGCTTaGAGAGCAGGAATTGAAAGAATATTCCTTATTGCT +
Preference number: 3 (lower is better)
Translates to: TSGKTTGCSKLA*RAGIERIFLIA
Trigger: AGCAATAAGGAATATTCTTTCAATTCCTGCTCTTCAAGCCAATTTACTACACCCAGTTGTCTTTCCAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp AAACCTGCAAGAGCCAATAAAAAGAGTAATGGACTTTaGGCATTTGTTAACCATCCATTGAGAGGATTTAAG +
Preference number: 3 (lower is better)
Translates to: KPARANKKSNGL*AFVNHPLRGFK
Trigger: CTTAAATCCTCTCAATGGATGGTTAACAAATGCTCAAAGTCCATTACTCTTTTTATTGGCTCTTGCAGGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp AAAAGCTGTAGCAACACAAACATGATCATTTTCATGTaGCACATGAACTTTCTCATTACACTTGTTAGCCAC +
Preference number: 3 (lower is better)
Translates to: KSCSNTNMIIFM*HMNFLITLVSH
Trigger: GTGGCTAACAAGTGTAATGAGAAAGTTCATGTGTCACATGAAAATGATCATGTTTGTGTTGCTACAGCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR TCA 72 bp TTAATAATTCAAGTGATAAAGGCACTGAAATTGATTTaGGCTATTGAAAAGTCATCCTGCCAGTGGAACACT +
Preference number: 3 (lower is better)
Translates to: LIIQVIKALKLI*AIEKSSCQWNT
Trigger: AGTGTTCCACTGGCAGGATGACTTTTCAATAGCTCAAATCAATTTCAGTGCCTTTATCACTTGAATTATTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCGGGCCGCCAGCCCGATaGCCTTGGTGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCGPPAR*PWWKAR
Trigger: CCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCC...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGGGGCCGCCAGCCCGATaGCCTTGGTGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: GPWAGAIQKMSSSSMSSTGPPAR*PWWKAR
Trigger: CCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCC...CGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR GCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCCCACCAGGCCCACGTTaGTCCACTCCCGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCPPGPR*STPGRG
Trigger: TCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGG...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCCGGACCAGGTGTCCGTaGACACCTGGGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCRTRCP*TPGRHC
Trigger: GCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCG...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGGGGTTACCAGGACCGTaGGGACCGCCGTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLGLPGP*GPPCKP
Trigger: TGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCC...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCGGGTTACCAGGACCGTaGGGACCGCCGTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCGLPGP*GPPCKP
Trigger: TGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCC...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGCCGGAAGAGGATGGCTaGGGCCAGCAGGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLPEEDG*GQQDQR
Trigger: ACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGG...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCATGGGGACGTTTGGGCTaGAGAGGGCTGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPWGRLG*RGLAGP
Trigger: AGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCA...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp GTGGGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCTGGTGGAAGGCACGGTaGAACTGCCCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGPWAGAIQKMSSSSMSSWWKAR*NCPARS
Trigger: GCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCA...GCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGACCGTTGGGGACGTTTaGGCTGCAGAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLTVGDV*AAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGT...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCAACCGTTGGGGACGTTTaGGCTGCAGAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPTVGDV*AAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGT...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGTCCACAGAGATGGCATaGTCCTGCCAGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLSTEMA*SCQPGR
Trigger: TCTTCCCGGCTGGCAGGACCATGCCATCTCTGTGGA...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATGGGGTTACCAGGACCGTaGGGACCGCCGTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PWAGAIQKMSSSSMSSTMGLPGP*GPPCKP
Trigger: TGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCC...CATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR TCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGTGGTTTGGGAGCCCTaGCATTCGCCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLVVWEP*HSPGVS
Trigger: ACTGACACCAGGCGAATGTCAGGGCTCCCAAACCAC...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GCAGATGCTGATGTAGACCATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGGGTTACCAGGACCGTaGGGACCGCCGTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: ADADVDHDVGGPMGRRDPGLPGP*GPPCKP
Trigger: TGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCC...TGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGCATCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp CCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PMPLVEGTVKLPSKEQMLMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp AGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCCCTGGCTCATGCTCTaGGCCCTGGATTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RWCQATVGDVWAAEGWLGPWLML*ALDSAF
Trigger: AAAAGCAGAATCCAGGGCCCAGAGCATGAGCCAGGG...GCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 72 bp TTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FVSSERDGARQP*GTFGLQRAGWA
Trigger: GGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp ACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAGCCTGCACAGCTTGGGCCGCCAGCCCGATaGCCTTGGTGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: TLSDFGEWIISTTEPAQLGPPAR*PWWKAR
Trigger: CCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCC...AAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR GCA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACTGGACGGGTTGTTATaGAAGATGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPLDGLL*KMSWAA
Trigger: GGCGGCCCAAGACATCTTGCATAACAACCCGTCCAG...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGAGAGGGCTCTCTGACTaGACGGGTTGTTATGCAAGA +
Preference number: 4 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLRGLSD*TGCYAR
Trigger: TCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCT...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGACACGACGTAGTAGATaGCCCCGAACACCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLTRRSR*PRTPRS
Trigger: ACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGT...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGCCTGAGCAGACTCCATaGTCCGTGCAAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLPEQTP*SVQAEF
Trigger: AAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGG...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 72 bp GGCTCTCTGACTGGACGGGTTGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GSLTGRVVMQDV*GRQPDALGGRH
Trigger: GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACTGGTGGAAGGCACGGTaGAACTGCCCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHWWKAR*NCPARS
Trigger: GCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCA...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR TCA 90 bp GTAGACCATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGAGGCAGAGGGCTCTCTaGCTGGACGGGTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: VDHDVGGPMGRRDPEDEQRQRAL*LDGLLC
Trigger: GCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCT...CTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp AGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCGATCTCAATGAGAGCTaGGCAAGGCCACCAGAATAC +
Preference number: 4 (lower is better)
Translates to: RWCQATVGDVWAAEGWLGDLNES*ARPPEY
Trigger: GTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATC...GCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCTGGTGGAAGGCACGGTaGAACTGCCCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGWWKAR*NCPARS
Trigger: GCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCA...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGCCACGGAGACGGTCGTaGATCCACAGGCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRPRRRS*IHRPSP
Trigger: TGGGGATGGCCTGTGGATTCACGACCGTCTCCGTGG...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGCCACGGAGACGGTCGTaGATCCACAGGCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: EIRLIRERWCQATVGDVWPRRRS*IHRPSP
Trigger: TGGGGATGGCCTGTGGATTCACGACCGTCTCCGTGG...CCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCCTGGCCCCTAGAAGTTaGGCACAACATTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCLAPRS*AQHLQR
Trigger: TCTTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAG...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCATCCAGAACACCATCTaGCATGGTTCCTACAGTGAG +
Preference number: 4 (lower is better)
Translates to: SWAASPMPLVEGTVKLPSIQNTI*HGSYSE
Trigger: CTCACTGTAGGAACCATGTCAGATGGTGTTCTGGAT...GCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557930.1
CDS-3UTR GCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAGGGCCGCCAGCCCGATaGCCTTGGTGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQGPPAR*PWWKAR
Trigger: CCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCC...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTAGCCCGGCGCGCCGCTaGAGAGATCGAAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPSPARR*RDRRRA
Trigger: GGCTCTCCTTCGATCTCTGCAGCGGCGCGCCGGGCT...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS-3UTR CCA 90 bp CAGGACCAGCGTGGTAAACACGACGTAGTAGATGGCCCCGAACACCGAGGAGTCAAGTACCTCGCCGCTTaGCACGCACGATGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QDQRGKHDVVDGPEHRGVKYLAA*HARCPS
Trigger: AGAAGGGCATCGTGCGTGCCAAGCGGCGAGGTACTT...GACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGTTTACCACGCTGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGGATAGGAAGCTAAAATaGACCCGAACGGTACTCCAA +
Preference number: 4 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLDRKLK*TRTVLQ
Trigger: TTGGAGTACCGTTCGGGTCCATTTTAGCTTCCTATC...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000561183.5
CDS-3UTR CCA 90 bp AGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCGTAGCCCACAAACACTaGATTGGTCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RWCQATVGDVWAAEGWLGVAHKH*IGQLFL
Trigger: GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTAC...GCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACGGGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGTTATGCAAGATGTCTTaGGCCGCCAGCCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: TGCYARCLGPPARCPWWKLCKMS*AASPMP
Trigger: GGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAA...CTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp GGGGAGTGGATAATCAGCACGACGGAGCCTGCACAGCTTAGCAGGCACCCCAACCTCATCAGAGAGAGATaGTGCCAGGCAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: GEWIISTTEPAQLSRHPNLIRER*CQATVG
Trigger: CCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAG...GTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCTGCTATGCTCCCATTTaGAACACATGGATGGGAACA +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCCYAPI*NTWMGT
Trigger: TGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCA...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AGCACGACGGAGCCTGCACAGCTTAGCAGGCACCCCAACTTGCCCAAGATGTTGTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: STTEPAQLSRHPNLPKMLSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...CAACATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR TCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGTGGTGGAAGGCACGGTaGAACTGCCCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRWWKAR*NCPARS
Trigger: GCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCA...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCCGGAAGAGGATGGCTaGGGCCAGCAGGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCPEEDG*GQQDQR
Trigger: ACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGG...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGGGGCCGCCAGCCCGATaGCCTTGGTGGAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKGPPAR*PWWKAR
Trigger: CCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCC...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCTGGGGACGTTTGGGCTaGAGAGGGCTGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCWGRLG*RGLAGP
Trigger: AGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCA...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTTGGGGACGTTTGGGCTaGAGAGGGCTGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPWGRLG*RGLAGP
Trigger: AGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCA...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCAGCCTGCGGTATTCAGTaGGGTCACATGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GCYARCLGPPARCPWWKAACGIQ*GHMLYR
Trigger: CCTGTACAGCATGTGACCGCACTGAATACCGCAGGC...TGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp CATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGTCAGACTTTGGGGAGTaGATAATCAGCACGACGGAG +
Preference number: 4 (lower is better)
Translates to: HDVGGPMGRRDPEDEQQQSDFGE*IISTTE
Trigger: CTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGA...CTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCCACTCCATGTGGCACTaGAAGGACTTCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGHSMWH*KDFPPQ
Trigger: CTGGGGAGGGAAGTCCTTCCAGTGCCACATGGAGTG...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCCCAACATATTACCGCTaGGATGAACTTCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCPTYYR*DELLER
Trigger: TCTTTCCAGAAGTTCATCCCAGCGGTAATATGTTGG...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGATTAGCTGGGCGTCGTaGCGGAGGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EIRLIRERWCQATVGDVWISWAS*RRPVVP
Trigger: TGGGACTACAGGCCTCCGCCACGACGCCCAGCTAAT...CCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS-3UTR CCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCGGAGAGCCCTGGCGCTaGGCGTTTCTCTTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCGEPWR*AFLFRP
Trigger: AGGGCGGAAGAGAAACGCCCAGCGCCAGGGCTCTCC...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561183.5
3UTR CAA 72 bp CCGAACACCGAGGAGTCGAAGCACTCCAGCGCCTTGTaGATGTACCTGAACTGGACGATGATGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PNTEESKHSSAL*MYLNWTMMLQP
Trigger: CGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGTGTTCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR CAA 72 bp GCCCCGAACACCGAGGAGTCGAAGCACTCCAGCGCCTaGTTGATGTACCTGAACTGGACGATGATGCTGCAG +
Preference number: 4 (lower is better)
Translates to: APNTEESKHSSA*LMYLNWTMMLQ
Trigger: CTGCAGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCCTCGGTGTTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCCGGAAGAGGATGGCTaGGGCCAGCAGGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTPEEDG*GQQDQR
Trigger: ACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGG...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCACGGAGACGGTCGTaGATCCACAGGCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQAPRRRS*IHRPSP
Trigger: TGGGGATGGCCTGTGGATTCACGACCGTCTCCGTGG...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGGAATGTGGATATATTTaGTACTGGATCCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLECGYI*YWIPGN
Trigger: GTTACCTGGGATCCAGTATCAAATATATCCACATTC...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTACCTTTGATCAATaGGCAGAACAGGAAGCAATC +
Preference number: 4 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPPTFDQ*AEQEAI
Trigger: GATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGG...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGGCTTGGCACGCACGATaGCCTTCTTCTGTAGCACGA +
Preference number: 4 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQAWHAR*PSSVAR
Trigger: TCGTGCTACAGAAGAAGGGCATCGTGCGTGCCAAGC...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000559448.5
CDS-3UTR GCA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGGCCTGCGGTATTCAGTaGGGTCACATGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSACGIQ*GHMLYR
Trigger: CCTGTACAGCATGTGACCGCACTGAATACCGCAGGC...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGAAGTACCTCGCCGCTTaGCACGCACGATGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRKYLAA*HARCPS
Trigger: AGAAGGGCATCGTGCGTGCCAAGCGGCGAGGTACTT...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337435.9
CDS-3UTR CCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCCTGCAGAGGGCTGGCTaGGCCTCTGCTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PLLLHIQSRPETTSNAYSLQRAG*ASALVL
Trigger: CAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG...GGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCTTTGGAACACATGGATaGGAACACTATAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCFGTHG*EHYRQR
Trigger: TCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAA...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp GCCAGCCCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGTCAATACACCCATCATaGACACACTTCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: ASPMPLVEGTVKLPSKEQSIHPS*THFSAR
Trigger: CCTTGCAGAGAAGTGTGTCCATGATGGGTGTATTGA...CTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCGCACTGAAATTGATTTaGGCTATTGAAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCALKLI*AIEKSS
Trigger: GGATGACTTTTCAATAGCTCAAATCAATTTCAGTGC...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCCATCCAATCCCGCCTaGTGGACGAACAACGCCCTC +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKPSNPA*WTNNAL
Trigger: GAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGG...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACACATGGTTCCTACAGTaGGTAACACCCGAACGGTAC +
Preference number: 4 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHTWFLQ*VTPERY
Trigger: GTACCGTTCGGGTGTTACTCACTGTAGGAACCATGT...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557930.1
CDS-3UTR GCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGCTGGACGGGTTGTTATaGAAGATGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRLDGLL*KMSWAA
Trigger: GGCGGCCCAAGACATCTTGCATAACAACCCGTCCAG...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp GGACGGGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGAAACCACCTCCAATaGCTATTCCTCGAACCATCC +
Preference number: 4 (lower is better)
Translates to: GRVVMQDVLGRQPDALGGRNHLQ*LFLEPS
Trigger: GGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCT...TCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR GCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGATGTGCATCACTTCATaGTATGCTCCCATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLMCITS*YAPIWN
Trigger: GTTCCAAATGGGAGCATAGCATGAAGTGATGCACAT...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp ACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGGGTTACCAGGACCGTaGGGACCGCCGTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TSNHGQKPPPMPIPRTIQGLPGP*GPPCKP
Trigger: TGGCTTACACGGCGGTCCCCACGGTCCTGGTAACCC...TTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACGACGGAGCCTGCACAGCTTAGCAGGCACCCCAACTTGCCCAAGATGTTGAGCTTGATGTACCTGAACTaGACGATGATGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TTEPAQLSRHPNLPKMLSLMYLN*TMMLQP
Trigger: CGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAA...GCTCAACATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTACTCCCGGAAGAGGATaGCTGAGGCCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQATPGRG*LRPAGP
Trigger: TGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGT...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGCCTGAGCAGACTCCATaGTCCGTGCAAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRPEQTP*SVQAEF
Trigger: AAACTCCGCTTGCACGGACCATGGAGTCTGCTCAGG...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAATGGTGGAAGGCACGGTaGAACTGCCCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQWWKAR*NCPARS
Trigger: GCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCA...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGAGGCAGAGGGCTCTCTaGCTGGACGGGTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLRQRAL*LDGLLC
Trigger: GCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCT...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCCGGAAGAGGATGGCTaGGGCCAGCAGGACCAGCGT +
Preference number: 4 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDPEEDG*GQQDQR
Trigger: ACGCTGGTCCTGCTGGCCTCAGCCATCCTCTTCCGG...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp CCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATGAGGGTACTCGATATATaGGCTATTGAACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: PWAGAIQKMSSSSMSSTMRVLDI*AIEQVL
Trigger: GAGTACCTGTTCAATAGCTCATATATCGAGTACCCT...CATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCATACATGATACCGTGGTaGAATATGTGCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPYMIPW*NMCITS
Trigger: TGAAGTGATGCACATATTTCACCACGGTATCATGTA...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCTGTAGTAAATTGGCTTaGAGAGCAGGAATTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RWCQATVGDVWAAEGWLGCSKLA*RAGIER
Trigger: TCTTTCAATTCCTGCTCTTCAAGCCAATTTACTACA...GCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCGCAGGTCTTGGCCACTaGCACATGTGTCTATGTATG +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGAGLGH*HMCLCM
Trigger: CATACATAGACACATGTGTCAGTGGCCAAGACCTGC...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp CCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCGAGATGGCATGGTCCTaGCAGCCGGGAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLHIQSRPETTSNAYSEMAWS*QPGRCS
Trigger: GGAGCATCTTCCCGGCTGGCAGGACCATGCCATCTC...GGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCGAGATGGCATGGTCCTaGCAGCCGGGAAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTEMAWS*QPGRCS
Trigger: GGAGCATCTTCCCGGCTGGCAGGACCATGCCATCTC...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGTTATGCAAGATGTCTTaGGCCGCCAGCCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLLCKMS*AASPMP
Trigger: GGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAA...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGTTGATGTACCTGAACTaGACGATGATGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSLMYLN*TMMLQP
Trigger: CGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAA...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAACTCCCGGAAGAGGATaGCTGAGGCCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQTPGRG*LRPAGP
Trigger: TGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGT...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TSNHGQKPPPMPIPRTIQVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...TTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTCACTCCATGTGGCACTaGAAGGACTTCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPHSMWH*KDFPPQ
Trigger: CTGGGGAGGGAAGTCCTTCCAGTGCCACATGGAGTG...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAAGGCAGAGGGCTCTCTaGCTGGACGGGTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQRQRAL*LDGLLC
Trigger: GCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCT...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCTACAGCATGGTCCTaGGCAGACTCCATGGTCCGT +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNPTAWS*ADSMVR
Trigger: ACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGG...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGTGCTTTCTCAGCGCATaGGGCTGTGTGTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKCFLSA*GCVSYS
Trigger: GCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCA...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGGCTTGGCACGCACGATaGCCTTCTTCTGTAGCACGA +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLAWHAR*PSSVAR
Trigger: TCGTGCTACAGAAGAAGGGCATCGTGCGTGCCAAGC...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000559448.5
CDS-3UTR GCA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACATCCAAGCTCCTATTaGAATCTAGTCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPHPSSY*NLVCFH
Trigger: ATGAAAACAGACTAGATTGCAATAGGAGCTTGGATG...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCAGGATGCTCTGCCATTaGAAACAACAAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGRMLCH*KQQGDG
Trigger: GCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGGCATCAGGGTTGAGCTaGTTGGAAGCAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRASGLS*LEAGSS
Trigger: TGAACTTCCTGCTTCCAAGCAGCTCAACCCTGATGC...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACTCTGTAGCACGAACGTaGACCCGTTCACCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNSVART*TRSPGS
Trigger: CGAGCCTGGTGAACGGGTCCACGTTCGTGCTACAGA...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000559448.5
CDS-3UTR CCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGCACACTCTCAGACTTTaGGGAGTGGATAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSHTLRL*GVDNQH
Trigger: GTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTG...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGATGTACACACTCTCAGACTTTaGGGAGTGGATAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: ALGGRHGETAQQGADADVHTLRL*GVDNQH
Trigger: GTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTG...TACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp AGGTTGAAATTGAACTCTTTGAACACCTGTATAAGGACAATCCCCACGGAGACGCTGCAGAGGGCTGGCTaGGCCTCTGCTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLKLNSLNTCIRTIPTETLQRAG*ASALVL
Trigger: CAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG...CGTCTCCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAACCGTTGGGGACGTTTaGGCTGCAGAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKTVGDV*AAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGT...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCAAAGTCATCCTGCCAGTaGAACACTACCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: GCYARCLGPPARCPWWKAKSSCQ*NTTSCS
Trigger: TGAACATGAGGTAGTGTTCCACTGGCAGGATGACTT...TGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGCCTTCTCCACAGAGATaGCATGGTCCTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLPSPQR*HGPASR
Trigger: CCGGCTGGCAGGACCATGCCATCTCTGTGGAGAAGG...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGTCTATGTATGCTAATTaGAAGCTCCCCAATACATGT +
Preference number: 4 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLSMYAN*KLPNTC
Trigger: ACATGTATTGGGGAGCTTCCAATTAGCATACATAGA...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAATCGAAGGAGAGCCCTaGCGCTGGGCGTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQIEGEP*RWAFLF
Trigger: GAAGAGAAACGCCCAGCGCCAGGGCTCTCCTTCGAT...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS-3UTR TCA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGAATTGGCCCTACCTTTaGTCAATGAGCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQNWPYL*SMSRTG
Trigger: TCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATT...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGCTGGCCCCTAGAAGTTaGGCACAACATTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQLAPRS*AQHLQR
Trigger: TCTTTGTAAATGTTGTGCTCAACTTCTAGGGGCCAG...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGAACTGTCTTGTGGTGTaGCTGGTGTACAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSNCLVV*LVYKLV
Trigger: GACCAATTTGTACACCAGTCACACCACAAGACAGTT...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCAACTCCCAGGCACTTCTaGACACGGTGCTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPTPRHF*TRCSHL
Trigger: GAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGT...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTCACACCATCGGAAGGTaGTCTTTCTGTGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPHTIGR*SFCAAF
Trigger: GAAAGCCGCACAGAAAGATCACCTTCCGATGGTGTG...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGCACACCATCGGAAGGTaGTCTTTCTGTGCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWHTIGR*SFCAAF
Trigger: GAAAGCCGCACAGAAAGATCACCTTCCGATGGTGTG...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp AGCCTGAGTTGTCACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGACAGCCATTGCGATTGTaGCAGCCCACCACACAATGT +
Preference number: 4 (lower is better)
Translates to: SLSCHTLRLWGVDNQHDGQPLRL*QPTTQC
Trigger: ACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTG...TCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR GCA 90 bp CCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCCTGGACGGGTTGTTATaGAAGATGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PLLLHIQSRPETTSNAYSLDGLL*KMSWAA
Trigger: GGCGGCCCAAGACATCTTGCATAACAACCCGTCCAG...GGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCTTCTCCACAGAGATaGCATGGTCCTGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKPSPQR*HGPASR
Trigger: CCGGCTGGCAGGACCATGCCATCTCTGTGGAGAAGG...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCTCATGCTCTGGGCCCTaGATTCTGCTTTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGSCSGP*ILLFKC
Trigger: GCATTTAAAAAGCAGAATCCAGGGCCCAGAGCATGA...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACATTGATTTGAGCTATTaGAAAGTCATCCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHIDLSY*KVILPV
Trigger: CACTGGCAGGATGACTTTTCAATAGCTCAAATCAAT...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp CAGCAAGGAGCAGATGCTGATGTAGACCATGATGTTGGTGGGCCCATGGGCCGGGAATGTGGATATATTTaGTACTGGATCCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: QQGADADVDHDVGGPMGRECGYI*YWIPGN
Trigger: GTTACCTGGGATCCAGTATCAAATATATCCACATTC...CCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp CCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGCTAATTTATTTCTTCTaGATGGCCATGAATGCTTGC +
Preference number: 4 (lower is better)
Translates to: PMPLVEGTVKLPSKEQMLLIYFF*MAMNAC
Trigger: GCAAGCATTCATGGCCATTCAGAAGAAATAAATTAG...CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGGCCACATGTATTCTTTaGATATCTCACACCCCTTAC +
Preference number: 4 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQATCIL*ISHTPY
Trigger: GTAAGGGGTGTGAGATATTCAAAGAATACATGTGGC...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTAGACGACTGCACAAGTaGACAGTGCTCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPRRLHK*TVLTST
Trigger: GGTAGAAGTGAGCACTGTTCACTTGTGCAGTCGTCT...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACCCATCCAATCCCGCCTaGTGGACGAACAACGCCCTC +
Preference number: 4 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYPSNPA*WTNNAL
Trigger: GAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGG...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp ACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAACAGCCATTGCGATTGTaGCAGCCCACCACACAATGT +
Preference number: 4 (lower is better)
Translates to: TSNHGQKPPPMPIPRTIQQPLRL*QPTTQC
Trigger: ACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTG...TTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTTGGGGACGTTTGGGCTaGAGAGGGCTGGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFWGRLG*RGLAGP
Trigger: AGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCA...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACACATTCACTGTACAGTaGCAGAGTTCAAGACAACAA +
Preference number: 4 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHTFTVQ*QSSRQQ
Trigger: TTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGT...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR GCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCACGGACCAGGTGTCCGTaGACACCTGGGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSRTRCP*TPGRHC
Trigger: GCAGTGTCTCCCAGGTGTGCACGGACACCTGGTCCG...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp ACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAAGACTCCATGGTCCGTaGAAGCGGAGTTTCCACTGT +
Preference number: 4 (lower is better)
Translates to: TSNHGQKPPPMPIPRTIQRLHGP*KRSFHC
Trigger: ACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCT...TTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGTCAGACTTTGGGGAGTaGATAATCAGCACGACGGAG +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLSDFGE*IISTTE
Trigger: CTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGA...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAGCCTGCACAGCTTGTAGCCCACAAACACTaGATTGGTCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLSDFGEWIISTTEPAQLVAHKH*IGQLFL
Trigger: GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTAC...AAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGAGAGGGCTCTCTGACTaGACGGGTTGTTATGCAAGA +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLRGLSD*TGCYAR
Trigger: TCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCT...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGACACGACGTAGTAGATaGCCCCGAACACCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKTRRSR*PRTPRS
Trigger: ACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGT...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGACTCCCGGAAGAGGATaGCTGAGGCCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMTPGRG*LRPAGP
Trigger: TGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGT...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCACCGTTGGGGACGTTTaGGCTGCAGAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSTVGDV*AAEGWL
Trigger: CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGT...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGTGCTATGCTCCCATTTaGAACACATGGATGGGAACA +
Preference number: 4 (lower is better)
Translates to: SAECQEHITPSEGDLSVRCYAPI*NTWMGT
Trigger: TGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCA...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTGGGCCTCACTCCATGTaGCACTGGAAGGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSGPHSM*HWKDFP
Trigger: AGGGAAGTCCTTCCAGTGCCACATGGAGTGAGGCCC...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCTAGAGTCAGCTACATaGGGCTCTGGGCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNLESAT*GSGLVI
Trigger: GATCACAAGCCCAGAGCCCCATGTAGCTGACTCTAG...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS-3UTR CCA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACGAAGCTAAAATGGACTaGGATTCCAAGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHEAKMD*DSKLKT
Trigger: TGTCTTCAACTTGGAATCCCAGTCCATTTTAGCTTC...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557930.1
CDS-3UTR TCA 90 bp ACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAGCCTGCACAGCTTACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TLSDFGEWIISTTEPAQLTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...AAGCTGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR TCA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTTGCTTTCTCAGCGCATaGGGCTGTGTGTCCTACAGC +
Preference number: 4 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSCFLSA*GCVSYS
Trigger: GCTGTAGGACACACAGCCTCATGCGCTGAGAAAGCA...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGTGGTTTGGGAGCCCTaGCATTCGCCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMVVWEP*HSPGVS
Trigger: ACTGACACCAGGCGAATGTCAGGGCTCCCAAACCAC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTGGACGGGTTGTTATaGAAGATGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDLDGLL*KMSWAA
Trigger: GGCGGCCCAAGACATCTTGCATAACAACCCGTCCAG...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTCCACCAGGCCCACGTTaGTCCACTCCCGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFPPGPR*STPGRG
Trigger: TCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGG...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCCACCAGGCCCACGTTaGTCCACTCCCGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSPPGPR*STPGRG
Trigger: TCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGG...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp GATGTACCTGAACTGGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGCATCCAAGCTCCTATTaGAATCTAGTCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: DVPELDDDAAAEHGQEYQHPSSY*NLVCFH
Trigger: ATGAAAACAGACTAGATTGCAATAGGAGCTTGGATG...CTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR GCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAATCAGAGAGAGATGGTaGCAGGCAACCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKIRERW*QATVGD
Trigger: GTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGAT...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGTGTGTTACAATTGCCTaGGGTATTCAGTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKCVTIA*GIQCGH
Trigger: GTGACCGCACTGAATACCGCAGGCAATTGTAACACA...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp AGCCTGAGTTGTCACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAAGGATGCTCTGCCATTaGAAACAACAAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SLSCHTLRLWGVDNQHDGRMLCH*KQQGDG
Trigger: GCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT...TCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR GCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGACGGAAGCTAATCCATaGTGTCGGGAACAGACCTTA +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWTEANP*CREQTL
Trigger: TAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGT...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACGCATCAGGGTTGAGCTaGTTGGAAGCAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNASGLS*LEAGSS
Trigger: TGAACTTCCTGCTTCCAAGCAGCTCAACCCTGATGC...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp AGGTTGAAATTGAACTCTTTGAACACCTGTATAAGGACAATCCCCACGGAGACGTCTGTAGCACGAACGTaGACCCGTTCACCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: RLKLNSLNTCIRTIPTETSVART*TRSPGS
Trigger: CGAGCCTGGTGAACGGGTCCACGTTCGTGCTACAGA...CGTCTCCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CCA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCACACTCTCAGACTTTaGGGAGTGGATAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQAHTLRL*GVDNQH
Trigger: GTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTG...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTCACACTCTCAGACTTTaGGGAGTGGATAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPHTLRL*GVDNQH
Trigger: GTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTG...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGATGTAGACCATGATGTTGGTGTAGCCCACAAACACTaGATTGGTCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HGETAQQGADADVDHDVGVAHKH*IGQLFL
Trigger: GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTAC...ACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTATGTTGGTGGGCCCATaGGCCGGCGCGATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLIMLVGP*AGAIQK
Trigger: CTTCTGGATCGCGCCGGCCCATGGGCCCACCAACAT...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACTCATCAGAGAGAGATaGTGCCAGGCAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKLIRER*CQATVG
Trigger: CCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAG...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAACCATCTGGCCTGGGTaGGTCATAGGTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKTIWPG*VIGVPS
Trigger: AGATGGGACACCTATGACCCACCCAGGCCAGATGGT...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCCCCATCTTTCAACTTaGCGTAGTTCCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTPHLST*RSSLLR
Trigger: TCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGG...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACGGGGCTTTGTGGTGCTaGGTTAGGGTTAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNGALWC*VRVRIL
Trigger: AAGGATTCTAACCCTAACCCAGCACCACAAAGCCCC...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTCCCTGGCTCATGCTCTaGGCCCTGGATTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSPWLML*ALDSAF
Trigger: AAAAGCAGAATCCAGGGCCCAGAGCATGAGCCAGGG...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGTTCTCTGCAAGGATTTaGGCATCTGTCCGAACGGTA +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWFSARI*ASVRTV
Trigger: TACCGTTCGGACAGATGCCCAAATCCTTGCAGAGAA...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AGCCTGAGTTGTCACACTCTCAGACTTTGGGGAGTGGATAATCAGCACGACGGAACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLSCHTLRLWGVDNQHDGTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...TCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACAACTCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR TCA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGAAGAGTAATGGACTTTaGGCATTTGTTAACCATCCA +
Preference number: 4 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQKSNGL*AFVNHP
Trigger: TGGATGGTTAACAAATGCTCAAAGTCCATTACTCTT...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGGAACAGACCTTACACTaGAATGTTCTCTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSEQTLH*NVLFLV
Trigger: AACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTC...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTAACTGTCTTGTGGTGTaGCTGGTGTACAAATTGGTC +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPNCLVV*LVYKLV
Trigger: GACCAATTTGTACACCAGTCACACCACAAGACAGTT...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCCTACAGCATGGTCCTaGGCAGACTCCATGGTCCGT +
Preference number: 4 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISPTAWS*ADSMVR
Trigger: ACGGACCATGGAGTCTGCTCAGGACCATGCTGTAGG...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp CCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCAGAAACCACCTCCAATaGCTATTCCTCGAACCATCC +
Preference number: 4 (lower is better)
Translates to: PLLLHIQSRPETTSNAYSRNHLQ*LFLEPS
Trigger: GGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCT...GGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTTCTGGTGCTGAGCCATaGTCCCCGCTATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISSGAEP*SPLSTR
Trigger: TCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACAGGATGCTCTGCCATTaGAAACAACAAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNRMLCH*KQQGDG
Trigger: GCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCTCTTTCTAGTTTCCTaGTTGGTGGCAGGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNLFLVS*LVAGSL
Trigger: TAGGCTTCCTGCCACCAAGCAGGAAACTAGAAAGAG...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAACTCTTTCTAGTTTCCTaGTTGGTGGCAGGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQLFLVS*LVAGSL
Trigger: TAGGCTTCCTGCCACCAAGCAGGAAACTAGAAAGAG...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTGATAGGAAGCTAAAATaGACCCGAACGGTACTCCAA +
Preference number: 4 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQADRKLK*TRTVLQ
Trigger: TTGGAGTACCGTTCGGGTCCATTTTAGCTTCCTATC...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000561183.5
CDS-3UTR CCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCACACTCTCAGACTTTaGGGAGTGGATAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTHTLRL*GVDNQH
Trigger: GTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTG...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTTATGCAAGATGTCTTaGGCCGCCAGCCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYLCKMS*AASPMP
Trigger: GGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAA...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTTTATGCAAGATGTCTTaGGCCGCCAGCCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISLCKMS*AASPMP
Trigger: GGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAA...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTGTGCCAGGCAACCGTTaGGGACGTTTGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSVPGNR*GRLGCR
Trigger: TCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACCTCATCAGAGAGAGATaGTGCCAGGCAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHLIRER*CQATVG
Trigger: CCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAG...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGAAGTCATCCTGCCAGTaGAACACTACCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWKSSCQ*NTTSCS
Trigger: TGAACATGAGGTAGTGTTCCACTGGCAGGATGACTT...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp ACGACGGAGCCTGCACAGCTTAGCAGGCACCCCAACTTGCCCAAGATGTTGAGCCAAACAACAAGGAGATaGCTACATTTATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TTEPAQLSRHPNLPKMLSQTTRR*LHLLAF
Trigger: AAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTG...GCTCAACATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
3UTR CAA 72 bp CATGGAATCATGCAAACTTTACACCCAGCACTTCCTTaGCTTTCTCAGCGCATGAGGCTGTGTGTCCTACAG +
Preference number: 4 (lower is better)
Translates to: HGIMQTLHPALP*LSQRMRLCVLQ
Trigger: CTGTAGGACACACAGCCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTGTAAAGTTTGCATGATTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GAATATACAGTCATGAACCACGTAACCATGTTTCTGTCAAAGACATACCACTTACCACGGAGACGGTCGTaGATCCACAGGCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: EYTVMNHVTMFLSKTYHLPRRRS*IHRPSP
Trigger: TGGGGATGGCCTGTGGATTCACGACCGTCTCCGTGG...TAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGTCAATTCTAACACCATaGTCGAGGACCTCTTCTACT +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWSILTP*SRTSST
Trigger: AGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGA...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCGATATATGAGCTATTaGACAGGTACTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKRYMSY*TGTLPL
Trigger: AAGTGGGAGAGTACCTGTTCAATAGCTCATATATCG...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTCAGTTCACAAATCACTaGCAACCCATGATCATCATG +
Preference number: 4 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPQFTNH*QPMIIM
Trigger: CATGATGATCATGGGTTGTCAGTGATTTGTGAACTG...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACAGGAAAAGATCTCAATaGGAGCTGAGCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDRKRSQ*ELSKAT
Trigger: GGTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCT...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATACTCCCAGGCACTTCTaGACACGGTGCTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYTPRHF*TRCSHL
Trigger: GAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGT...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp GAATATACAGTCATGAACCACGTAACCATGTTTCTGTCAAAGACATACCACTTACCACCAGGCCCACGTTaGTCCACTCCCGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EYTVMNHVTMFLSKTYHLPPGPR*STPGRG
Trigger: TCCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGG...TAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGAGAAACCACCTCCAATaGCTATTCCTCGAACCATCC +
Preference number: 4 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKRNHLQ*LFLEPS
Trigger: GGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCT...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp CACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGATGTAGACCATGATGTTGGTATGTGCATCACTTCATaGTATGCTCCCATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: HGETAQQGADADVDHDVGMCITS*YAPIWN
Trigger: GTTCCAAATGGGAGCATAGCATGAAGTGATGCACAT...ACCAACATCATGGTCTACATCAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR GCA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCAGACTCCATGGTCCGTaGAAGCGGAGTTTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSRLHGP*KRSFHC
Trigger: ACAGTGGAAACTCCGCTTGCACGGACCATGGAGTCT...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCTTATTACAAATCCAGTaGAACAGAATCCACGTGTTT +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGLLQIQ*NRIHVF
Trigger: AAACACGTGGATTCTGTTGCACTGGATTTGTAATAA...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAAGAGGGCTCTCTGACTaGACGGGTTGTTATGCAAGA +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKRGLSD*TGCYAR
Trigger: TCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCT...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCAACACGACGTAGTAGATaGCCCCGAACACCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSTRRSR*PRTPRS
Trigger: ACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGT...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACACTCCCGGAAGAGGATaGCTGAGGCCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYTPGRG*LRPAGP
Trigger: TGGTCCTGCTGGCCTCAGCCATCCTCTTCCGGGAGT...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACCTGCAGAGGGCTGGCTaGGCCTCTGCTCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYLQRAG*ASALVL
Trigger: CAGCACCAGAGCAGAGGCCCAGCCAGCCCTCTGCAG...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCACTCATCAGAGAGAGATaGTGCCAGGCAACCGTTGGG +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSLIRER*CQATVG
Trigger: CCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAG...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACTGCTATGCTCCCATTTaGAACACATGGATGGGAACA +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNCYAPI*NTWMGT
Trigger: TGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCA...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTGGGCCTCACTCCATGTaGCACTGGAAGGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLIGPHSM*HWKDFP
Trigger: AGGGAAGTCCTTCCAGTGCCACATGGAGTGAGGCCC...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp GTTTCCACTGTGCCACTCCCAGGCACTTCTGAACACGGTGCTCTCATCTCAGGCTTTTCAAGTATACAATaGAGGTATAAGAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: VSTVPLPGTSEHGALISGFSSIQ*RYKNLA
Trigger: GGCCAGATTCTTATACCTCCATTGTATACTTGAAAA...GCCTGAGATGAGAGCACCGTGTTCAGAAGTGCCTGGGAGTGGCACAGTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGAATATAAGCAGGTCTTaGCCACTGACACATGTGTCT +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLNISRS*PLTHVS
Trigger: AGACACATGTGTCAGTGGCCAAGACCTGCTTATATT...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACAGCTACATGGGGCTCTaGGCTTGTGATCCCATAGTC +
Preference number: 4 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHSYMGL*ACDPIV
Trigger: GACTATGGGATCACAAGCCCAGAGCCCCATGTAGCT...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS-3UTR TCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTTCCTCCAGCTCAGCCTaGGTTGTCACACTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSSSSSA*VVTLSD
Trigger: GTCTGAGAGTGTGACAACTCAGGCTGAGCTGGAGGA...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATCAATTCTAACACCATaGTCGAGGACCTCTTCTACT +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPSILTP*SRTSST
Trigger: AGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGA...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCGAATGTGGATATATTTaGTACTGGATCCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCECGYI*YWIPGN
Trigger: GTTACCTGGGATCCAGTATCAAATATATCCACATTC...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGTCTTCTGAATGGCCATaGATGCTTGCTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKSSEWP*MLADKE
Trigger: TTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGA...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGATCACTGACAACCCATaGTCATCATGTACACGTTTA +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLITDNP*SSCTRL
Trigger: TAAACGTGTACATGATGATCATGGGTTGTCAGTGAT...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGCCTACCTTTGATCAATaGGCAGAACAGGAAGCAATC +
Preference number: 4 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLPTFDQ*AEQEAI
Trigger: GATTGCTTCCTGTTCTGCTCATTGATCAAAGGTAGG...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGATCTCAATGAGAGCTaGGCAAGGCCACCAGAATAC +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMDLNES*ARPPEY
Trigger: GTATTCTGGTGGCCTTGCTCAGCTCTCATTGAGATC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCAATATTACCGCTGGGATaGACTTCTGGAAAGACAACT +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPILPLG*TSGKTT
Trigger: AGTTGTCTTTCCAGAAGTTCATCCCAGCGGTAATAT...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAATCACCAGTACAATTGTaGGGTGGAAATGAGGAATAC +
Preference number: 4 (lower is better)
Translates to: TSNHGQKPPPMPIPRTIQSPVQL*GGNEEY
Trigger: GTATTCCTCATTTCCACCTCACAATTGTACTGGTGA...TTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACGAATCTGGCCAGATGTaGAACATCACCTATAAGCTA +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNESGQM*NITYKL
Trigger: TAGCTTATAGGTGATGTTTCACATCTGGCCAGATTC...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCAGAATCTGGCCAGATGTaGAACATCACCTATAAGCTA +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPESGQM*NITYKL
Trigger: TAGCTTATAGGTGATGTTTCACATCTGGCCAGATTC...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGGTTTTAGAAACAATTTaGAGAACCATCCCACCCCTT +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLVLETI*RTIPPL
Trigger: AAGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAAC...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGTTGCTCAATGCTTGTTaGATGAACACATCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPITARNHLQCLFLEPSKLLNAC*MNTSFS
Trigger: GGAGAAAGATGTGTTCATTCAACAAGCATTGAGCAA...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437912.6
CDS-3UTR GCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTGCCTGCGGTATTCAGTaGGGTCACATGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLIACGIQ*GHMLYR
Trigger: CCTGTACAGCATGTGACCGCACTGAATACCGCAGGC...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp CCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCAGCTTCATGGAATCATaGAAACTTTACACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLLLHIQSRPETTSNAYSSFMES*KLYTQH
Trigger: GTGCTGGGTGTAAAGTTTGCATGATTCCATGAAGCT...GGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGTTATGCAAGATGTCTTaGGCCGCCAGCCCGATGCCC +
Preference number: 4 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQLCKMS*AASPMP
Trigger: GGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAA...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACTTGATGTACCTGAACTaGACGATGATGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHLMYLN*TMMLQP
Trigger: CGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAA...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTACACGACGTAGTAGATaGCCCCGAACACCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFTRRSR*PRTPRS
Trigger: ACTCCTCGGTGTTCGGGGCCATCTACTACGTCGTGT...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp GAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGCAAACAACAAGGAGATaGCTACATTTATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: EIRLIRERWCQATVGDVWQTTRR*LHLLAF
Trigger: AAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTG...CCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACCCCCATCTTTCAACTTaGCGTAGTTCCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYPHLST*RSSLLR
Trigger: TCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGG...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGCCCCATCTTTCAACTTaGCGTAGTTCCCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMPHLST*RSSLLR
Trigger: TCTCAGCAGGGAACTACGCCAAGTTGAAAGATGGGG...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACTCCACAGAGATGGCATaGTCCTGCCAGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYSTEMA*SCQPGR
Trigger: TCTTCCCGGCTGGCAGGACCATGCCATCTCTGTGGA...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCAGGAGGTATAAGAATCTaGCCAGATGTGAAACATCAC +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPGGIRI*PDVKHH
Trigger: GTGATGTTTCACATCTGGCCAGATTCTTATACCTCC...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACAATATAAGCAGGTCTTaGCCACTGACACATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNNISRS*PLTHVS
Trigger: AGACACATGTGTCAGTGGCCAAGACCTGCTTATATT...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCAATTGATTTGAGCTATTaGAAAGTCATCCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPIDLSY*KVILPV
Trigger: CACTGGCAGGATGACTTTTCAATAGCTCAAATCAAT...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAATTGATTTGAGCTATTaGAAAGTCATCCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQIDLSY*KVILPV
Trigger: CACTGGCAGGATGACTTTTCAATAGCTCAAATCAAT...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGGCACTGAAATTGATTTaGGCTATTGAAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLALKLI*AIEKSS
Trigger: GGATGACTTTTCAATAGCTCAAATCAATTTCAGTGC...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCTTGACTATCTTCCAGTaGATATACAGTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCLTIFQ*IYSHEP
Trigger: TGGTTCATGACTGTATATTCACTGGAAGATAGTCAA...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGTACATTTTTGGTCCCTaGGAAGGCAAAACACCAAGA +
Preference number: 4 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKYIFGP*EGKTPR
Trigger: TCTTGGTGTTTTGCCTTCTCAGGGACCAAAAATGTA...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAATTCTGTGCGGCTTTCTaGAGTCCCTGTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKFCAAF*SPCLIS
Trigger: GGAAATTAAACAGGGACTTCAGAAAGCCGCACAGAA...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATGCAGGTCTTGGCCACTaGCACATGTGTCTATGTATG +
Preference number: 4 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYAGLGH*HMCLCM
Trigger: CATACATAGACACATGTGTCAGTGGCCAAGACCTGC...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACAGAAACCACCTCCAATaGCTATTCCTCGAACCATCC +
Preference number: 4 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYRNHLQ*LFLEPS
Trigger: GGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCT...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCACATTCACTGTACAGTaGCAGAGTTCAAGACAACAA +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTTFTVQ*QSSRQQ
Trigger: TTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGT...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGACGGAAGCTAATCCATaGTGTCGGGAACAGACCTTA +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMTEANP*CREQTL
Trigger: TAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGT...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGGTAGCCCACAAACACTaGATTGGTCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMVAHKH*IGQLFL
Trigger: GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTAC...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGTAGCCCACAAACACTaGATTGGTCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMVAHKH*IGQLFL
Trigger: GAGGAAAAGCTGACCAATCCAGTGTTTGTGGGCTAC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCAAGAGGGCTCTCTGACTaGACGGGTTGTTATGCAAGA +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSRGLSD*TGCYAR
Trigger: TCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCT...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGACCATCTGGCCTGGGTaGGTCATAGGTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQTIWPG*VIGVPS
Trigger: AGATGGGACACCTATGACCCACCCAGGCCAGATGGT...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATTTGGAACACATGGATaGGAACACTATAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPFGTHG*EHYRQR
Trigger: TCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAA...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCGACTGGTGTACAAATTaGTCTTTTCTTTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCDWCTN*SFLSNS
Trigger: TGAGTTGGAAAGAAAAGACCAATTTGTACACCAGTC...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACAGGCAGAGGGCTCTCTaGCTGGACGGGTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYRQRAL*LDGLLC
Trigger: GCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCT...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACAGTTCACAAATCACTaGCAACCCATGATCATCATG +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKQFTNH*QPMIIM
Trigger: CATGATGATCATGGGTTGTCAGTGATTTGTGAACTG...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTAGGAAAAGATCTCAATaGGAGCTGAGCAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSRKRSQ*ELSKAT
Trigger: GGTGGCCTTGCTCAGCTCTCATTGAGATCTTTTCCT...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTAGACGACTGCACAAGTaGACAGTGCTCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFRRLHK*TVLTST
Trigger: GGTAGAAGTGAGCACTGTTCACTTGTGCAGTCGTCT...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCAGAACAGACCTTACACTaGAATGTTCTCTTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: CSPLSTRPPVTIQSILTPEQTLH*NVLFLV
Trigger: AACTAGAAAGAGAACATTTCAGTGTAAGGTCTGTTC...TGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCCAATACATGTCTATaGCAAAACTTTTACACAACC +
Preference number: 4 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNPNTCL*QNFYTT
Trigger: GGTTGTGTAAAAGTTTTGTCATAGACATGTATTGGG...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACCAGCCATTGCGATTGTaGCAGCCCACCACACAATGT +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYQPLRL*QPTTQC
Trigger: ACATTGTGTGGTGGGCTGGCACAATCGCAATGGCTG...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp ACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAACATCCAAGCTCCTATTaGAATCTAGTCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TSNHGQKPPPMPIPRTIQHPSSY*NLVCFH
Trigger: ATGAAAACAGACTAGATTGCAATAGGAGCTTGGATG...TTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR GCA 90 bp AACAACGCCCTCGGTGTCAGACACCATGAAAAGAACAACTTCAGAACACGGAAGACATTCACTGTACAGTaGCAGAGTTCAAGACAACAA +
Preference number: 4 (lower is better)
Translates to: NNALGVRHHEKNNFRTRKTFTVQ*QSSRQQ
Trigger: TTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGT...CTTCCGTGTTCTGAAGTTGTTCTTTTCATGGTGTCTGACACCGAGGGCGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAATGCACAAGTGAACAGTaGTCACTTCTACCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKCTSEQ*SLLPEN
Trigger: GTTTTCTGGTAGAAGTGAGCACTGTTCACTTGTGCA...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACTGCACAAGTGAACAGTaGTCACTTCTACCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDCTSEQ*SLLPEN
Trigger: GTTTTCTGGTAGAAGTGAGCACTGTTCACTTGTGCA...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTTCAGACTTTGGGGAGTaGATAATCAGCACGACGGAG +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSSDFGE*IISTTE
Trigger: CTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGA...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTTCAGACTTTGGGGAGTaGATAATCAGCACGACGGAG +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLISDFGE*IISTTE
Trigger: CTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGA...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTTTGATGTACCTGAACTaGACGATGATGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLILMYLN*TMMLQP
Trigger: CGGCTGCAGCATCATCGTCCAGTTCAGGTACATCAA...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGCCAAAGTTCTCACTTTaGGGCTTTTTCATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWPKFSL*GFFIFK
Trigger: TTTGAAAATGAAAAAGCCCCAAAGTGAGAACTTTGG...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCCAACATATTACCGCTaGGATGAACTTCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDPTYYR*DELLER
Trigger: TCTTTCCAGAAGTTCATCCCAGCGGTAATATGTTGG...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAGGAGGTATAAGAATCTaGCCAGATGTGAAACATCAC +
Preference number: 4 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKGGIRI*PDVKHH
Trigger: GTGATGTTTCACATCTGGCCAGATTCTTATACCTCC...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGTTTTCAAGTATACAATaGAGGTATAAGAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLFSSIQ*RYKNLA
Trigger: GGCCAGATTCTTATACCTCCATTGTATACTTGAAAA...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCGCAAAAATACTAAGGTaGGGGGCAATTATTATATTC +
Preference number: 4 (lower is better)
Translates to: SRTSSTSHPITARNHLQCAKILR*GAIIIF
Trigger: GAATATAATAATTGCCCCCCACCTTAGTATTTTTGC...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 72 bp GATTTGTTCATCTCCCCAAGGTTGAAATTGAACTCTTaGAACACCTGTATAAGGACAATCCCCACGGAGACG +
Preference number: 4 (lower is better)
Translates to: DLFISPRLKLNS*NTCIRTIPTET
Trigger: CGTCTCCGTGGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCACTTGCCCAAGATGTTaGGCTTTTCCTTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSTCPRC*AFPSGD
Trigger: ATCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGT...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACCGATATATGAGCTATTaGACAGGTACTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHRYMSY*TGTLPL
Trigger: AAGTGGGAGAGTACCTGTTCAATAGCTCATATATCG...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCTCATGTCATTTACTTTaGGGCTGGTGTCACGTGCTT +
Preference number: 4 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSSCHLL*GWCHVL
Trigger: AAGCACGTGACACCAGCCTCAAAGTAAATGACATGA...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTCTGTGCGGCTTTCTaGAGTCCCTGTTTAATTTCC +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSFCAAF*SPCLIS
Trigger: GGAAATTAAACAGGGACTTCAGAAAGCCGCACAGAA...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAATTATTACAAATCCAGTaGAACAGAATCCACGTGTTT +
Preference number: 4 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQLLQIQ*NRIHVF
Trigger: AAACACGTGGATTCTGTTGCACTGGATTTGTAATAA...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCAAAGTCATCCTGCCAGTaGAACACTACCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSKSSCQ*NTTSCS
Trigger: TGAACATGAGGTAGTGTTCCACTGGCAGGATGACTT...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCAAACAACAAGGAGATaGCTACATTTATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTQTTRR*LHLLAF
Trigger: AAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTG...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTTCAATTCTAACACCATaGTCGAGGACCTCTTCTACT +
Preference number: 4 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISSILTP*SRTSST
Trigger: AGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGA...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR TCA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTACATGATACCGTGGTaGAATATGTGCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYYMIPW*NMCITS
Trigger: TGAAGTGATGCACATATTTCACCACGGTATCATGTA...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTTCATGTCATTTACTTTaGGGCTGGTGTCACGTGCTT +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLISCHLL*GWCHVL
Trigger: AAGCACGTGACACCAGCCTCAAAGTAAATGACATGA...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTAATTGGCCCTACCTTTaGTCAATGAGCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLINWPYL*SMSRTG
Trigger: TCCTGTTCTGCTCATTGATCAAAGGTAGGGCCAATT...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACAATATTCCTTATTGCTaGACAAAGAGCTGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDNIPYC*TKSCEV
Trigger: TACTTCGCAGCTCTTTGTTCAGCAATAAGGAATATT...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGTTTTAGAAACAATTTaGAGAACCATCCCACCCCTT +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMVLETI*RTIPPL
Trigger: AAGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAAC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCACATTCACTGTACAGTaGCAGAGTTCAAGACAACAA +
Preference number: 4 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSTFTVQ*QSSRQQ
Trigger: TTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGT...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACTGTGTTACAATTGCCTaGGGTATTCAGTGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYCVTIA*GIQCGH
Trigger: GTGACCGCACTGAATACCGCAGGCAATTGTAACACA...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR GCA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCAATGTGCATCACTTCATaGTATGCTCCCATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSMCITS*YAPIWN
Trigger: GTTCCAAATGGGAGCATAGCATGAAGTGATGCACAT...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTAGGAAGTTTCCAATCTaGCCAACAGCCATTGCGATT +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFRKFPI*PTAIAI
Trigger: AATCGCAATGGCTGTTGGCCAGATTGGAAACTTCCT...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCTTTGGAACACATGGATaGGAACACTATAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSFGTHG*EHYRQR
Trigger: TCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAA...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CCA 90 bp GAATATACAGTCATGAACCACGTAACCATGTTTCTGTCAAAGACATACCACTTAGGGGCTTTGTGGTGCTaGGTTAGGGTTAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: EYTVMNHVTMFLSKTYHLGALWC*VRVRIL
Trigger: AAGGATTCTAACCCTAACCCAGCACCACAAAGCCCC...TAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGGTCTTGTGGTGTGACTaGTGTACAAATTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMVLWCD*CTNWSF
Trigger: AAAAGACCAATTTGTACACCAGTCACACCACAAGAC...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 72 bp GTGAAATATGTGCATCACTTCATGCTATGCTCCCATTaGGAACACATGGATGGGAACACTATAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VKYVHHFMLCSH*EHMDGNTIDRE
Trigger: TTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGCACTGAAATTGATTTaGGCTATTGAAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMALKLI*AIEKSS
Trigger: GGATGACTTTTCAATAGCTCAAATCAATTTCAGTGC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTTCTTCTGAATGGCCATaGATGCTTGCTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISSSEWP*MLADKE
Trigger: TTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGA...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTAGGGTACTCGATATATaGGCTATTGAACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSRVLDI*AIEQVL
Trigger: GAGTACCTGTTCAATAGCTCATATATCGAGTACCCT...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AGGAACTCTAGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATATCACTGACAACCCATaGTCATCATGTACACGTTTA +
Preference number: 4 (lower is better)
Translates to: RNSRMLCHCKQQGDGYIYITDNP*SSCTRL
Trigger: TAAACGTGTACATGATGATCATGGGTTGTCAGTGAT...ATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCTAGAGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTGCCACATGTATTCTTTaGATATCTCACACCCCTTAC +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLIATCIL*ISHTPY
Trigger: GTAAGGGGTGTGAGATATTCAAAGAATACATGTGGC...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGTAGCAACACAAACATaGTCATTTTCATGTGACACA +
Preference number: 4 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHVATQT*SFSCDT
Trigger: TGTGTCACATGAAAATGATCATGTTTGTGTTGCTAC...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCTGTAGTAAATTGGCTTaGAGAGCAGGAATTGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSCSKLA*RAGIER
Trigger: TCTTTCAATTCCTGCTCTTCAAGCCAATTTACTACA...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTTCACCAGTACAATTGTaGGGTGGAAATGAGGAATAC +
Preference number: 4 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSSPVQL*GGNEEY
Trigger: GTATTCCTCATTTCCACCTCACAATTGTACTGGTGA...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGTCATGCTCTGGGCCCTaGATTCTGCTTTTTAAATGC +
Preference number: 4 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQSCSGP*ILLFKC
Trigger: GCATTTAAAAAGCAGAATCCAGGGCCCAGAGCATGA...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGTCTATGTATGCTAATTaGAAGCTCCCCAATACATGT +
Preference number: 4 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMSMYAN*KLPNTC
Trigger: ACATGTATTGGGGAGCTTCCAATTAGCATACATAGA...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACCGATATATGAGCTATTaGACAGGTACTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYRYMSY*TGTLPL
Trigger: AAGTGGGAGAGTACCTGTTCAATAGCTCATATATCG...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACAGGGTACTCGATATATaGGCTATTGAACAGGTACTC +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYRVLDI*AIEQVL
Trigger: GAGTACCTGTTCAATAGCTCATATATCGAGTACCCT...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATATTCCTTATTGCTaGACAAAGAGCTGCGAAGTA +
Preference number: 4 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSNIPYC*TKSCEV
Trigger: TACTTCGCAGCTCTTTGTTCAGCAATAAGGAATATT...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGTACATTTTTGGTCCCTaGGAAGGCAAAACACCAAGA +
Preference number: 4 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQYIFGP*EGKTPR
Trigger: TCTTGGTGTTTTGCCTTCTCAGGGACCAAAAATGTA...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR GCA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCCATCCAAGCTCCTATTaGAATCTAGTCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSHPSSY*NLVCFH
Trigger: ATGAAAACAGACTAGATTGCAATAGGAGCTTGGATG...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTGTCTTGTGGTGTGACTaGTGTACAAATTGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFVLWCD*CTNWSF
Trigger: AAAAGACCAATTTGTACACCAGTCACACCACAAGAC...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGCAAAAATACTAAGGTaGGGGGCAATTATTATATTC +
Preference number: 4 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMAKILR*GAIIIF
Trigger: GAATATAATAATTGCCCCCCACCTTAGTATTTTTGC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTCTAATTTATTTCTTCTaGATGGCCATGAATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLILIYFF*MAMNAC
Trigger: GCAAGCATTCATGGCCATTCAGAAGAAATAAATTAG...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTAAGAGTAATGGACTTTaGGCATTTGTTAACCATCCA +
Preference number: 4 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFKSNGL*AFVNHP
Trigger: TGGATGGTTAACAAATGCTCAAAGTCCATTACTCTT...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACCTAATTTATTTCTTCTaGATGGCCATGAATGCTTGC +
Preference number: 4 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYLIYFF*MAMNAC
Trigger: GCAAGCATTCATGGCCATTCAGAAGAAATAAATTAG...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACATATTACCGCTGGGATaGACTTCTGGAAAGACAACT +
Preference number: 4 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYILPLG*TSGKTT
Trigger: AGTTGTCTTTCCAGAAGTTCATCCCAGCGGTAATAT...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR TCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGCCCAATACATGTCTATaGCAAAACTTTTACACAACC +
Preference number: 4 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQPNTCL*QNFYTT
Trigger: GGTTGTGTAAAAGTTTTGTCATAGACATGTATTGGG...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CCA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGGACTGGTGTACAAATTaGTCTTTTCTTTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQDWCTN*SFLSNS
Trigger: TGAGTTGGAAAGAAAAGACCAATTTGTACACCAGTC...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 72 bp TTCATATTAGATTTGTTCATCTCCCCAAGGTTGAAATaGAACTCTTTGAACACCTGTATAAGGACAATCCCC +
Preference number: 4 (lower is better)
Translates to: FILDLFISPRLK*NSLNTCIRTIP
Trigger: GGGGATTGTCCTTATACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGAGATGAACAAATCTAATATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR TCA 90 bp GAATATACAGTCATGAACCACGTAACCATGTTTCTGTCAAAGACATACCACTTATTGACTATCTTCCAGTaGATATACAGTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: EYTVMNHVTMFLSKTYHLLTIFQ*IYSHEP
Trigger: TGGTTCATGACTGTATATTCACTGGAAGATAGTCAA...TAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACTCTTCTGAATGGCCATaGATGCTTGCTGATAAAGAA +
Preference number: 4 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYSSEWP*MLADKE
Trigger: TTCTTTATCAGCAAGCATTCATGGCCATTCAGAAGA...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GAATATACAGTCATGAACCACGTAACCATGTTTCTGTCAAAGACATACCACTTATCAATGCTTGTTGAATaGACACATCTTTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: EYTVMNHVTMFLSKTYHLSMLVE*THLSPS
Trigger: TGATGGAGAAAGATGTGTTCATTCAACAAGCATTGA...TAAGTGGTATGTCTTTGACAGAAACATGGTTACGTGGTTCATGACTGTATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437912.6
CDS-3UTR TCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACTTGACTATCTTCCAGTaGATATACAGTCATGAACCA +
Preference number: 4 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYLTIFQ*IYSHEP
Trigger: TGGTTCATGACTGTATATTCACTGGAAGATAGTCAA...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR TCA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACGTAGCAACACAAACATaGTCATTTTCATGTGACACA +
Preference number: 4 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYVATQT*SFSCDT
Trigger: TGTGTCACATGAAAATGATCATGTTTGTGTTGCTAC...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
3UTR CAA 72 bp AACTTTCTCATTACACTTGTTAGCCACATGTATTCTTaGAATATCTCACACCCCTTACCTAGGAAACTATTT +
Preference number: 4 (lower is better)
Translates to: NFLITLVSHMYS*NISHPLPRKLF
Trigger: AAATAGTTTCCTAGGTAAGGGGTGTGAGATATTCAAAGAATACATGTGGCTAACAAGTGTAATGAGAAAGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS CCA 90 bp CTCGCCGCTTGGCACGCACGATGCCCTTCTTCTGTAGCACGAACGTaGACCCGTTCACCAGGCTCGACACGACGGCCACGCCCAGGCCGA +
Preference number: 5 (lower is better)
Translates to: LAAWHARCPSSVART*TRSPGSTRRPRPGR
Trigger: TCGGCCTGGGCGTGGCCGTCGTGTCGAGCCTGGTGAACGGGTCCACGTTCGTGCTACAGAAGAAGGGCATCGTGCGTGCCAAGCGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000673033.1
ENST00000673341.1
CDS-3UTR CAA 90 bp TGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCAACCGTTGGGGACGTTaGGGCTGCAGAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CQATVGDVWAAEGWLGLCNRWGR*GCRGLA
Trigger: AGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTT...GCAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp AGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCGCCAGCCCGATGCCCTaGGTGGAAGGCACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: RWCQATVGDVWAAEGWLGASPMP*VEGTVK
Trigger: TTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGC...GCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLGARQP*GTFGLQ
Trigger: CTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACC...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS CCA 90 bp CCTGGGGAGGCAGGGACATCCGAACTGAAAGGCACGCTTAGGGCCTaGGGAGAGGCCACGCGACACCCTCTTCCAAAGAACAGAGCCACC +
Preference number: 5 (lower is better)
Translates to: PGEAGTSELKGTLRA*GEATRHPLPKNRAT
Trigger: GGTGGCTCTGTTCTTTGGAAGAGGGTGTCGCGTGGCCTCTCCCCAGGCCCTAAGCGTGCCTTTCAGTTCGGATGTCCCTGCCTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS-3UTR CAA 90 bp GGCCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGCAACAGCCATTGCGATaGTGCCAGCCCACCACACAA +
Preference number: 5 (lower is better)
Translates to: GPWAGAIQKMSSSSMSSTQQPLR*CQPTTQ
Trigger: TTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTG...CGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp CCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATTCTGGCCAACAGCCATaGCGATTGTGCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: PMGRRDPEDEQQQHEQHDSGQQP*RLCQPT
Trigger: GGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGA...ATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 5 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGGCCAGCCCGATGCCCTaGGTGGAAGGCACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PMPLVEGTVKLPSKEQMLASPMP*VEGTVK
Trigger: TTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGC...CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp GATGTACCTGAACTGGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGAACCGTTGGGGACGTTaGGGCTGCAGAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: DVPELDDDAAAEHGQEYQNRWGR*GCRGLA
Trigger: AGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTT...CTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp GCTGATGTAGACCATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGAAGATTCTGGCCAACAGCCATaGCGATTGTGCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: ADVDHDVGGPMGRRDPEDSGQQP*RLCQPT
Trigger: GGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGA...ATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCAAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPSRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp ACGGGTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: TGCYARCLGPPARCPWWKVMQDV*GRQPDA
Trigger: GGCATCGGGCTGGCGGCCCAAGACATCTTGCATAAC...CTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAACCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp CCCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: PMGRRDPEDEQQQHEQHDSRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...ATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGAACCGTTGGGGACGTTaGGGCTGCAGAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SAECQEHITPSEGDLSVRNRWGR*GCRGLA
Trigger: AGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTT...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp GGAGTCGAAGCACTCCAGCGCCTTGTTGATGTACCTGAACTGGACGATGATGCTGAAGTACCTCGCCGCTaGGCACGCACGATGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GVEALQRLVDVPELDDDAEVPRR*ARTMPF
Trigger: GAAGGGCATCGTGCGTGCCAAGCGGCGAGGTACTTC...AGCATCATCGTCCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTTCGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp TGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACGGTGAAAAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: CKMSWAASPMPLVEGTVKSRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...TTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGTCCACCAGGCCCACGTaGCTCCACTCCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLSTRPT*LHSRKR
Trigger: CCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGA...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGTCCACCAGGCCCACGTaGCTCCACTCCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: HPITARNHLQCLFLEPSKSTRPT*LHSRKR
Trigger: CCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGA...CTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGTCCCCAAGGTTGAAATaGAACTCTTTGAACACCTGT +
Preference number: 5 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLSPRLK*NSLNTC
Trigger: ACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGA...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp TCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SNHGQKPPPMPIPRTIQAGARQP*GTFGLQ
Trigger: CTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACC...AGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGGGCCTCTGTCGATATATGAGCTATaGAACAGGTACTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: VPGNRWGRLGCRGLAGPLSIYEL*NRYSPT
Trigger: AGTGGGAGAGTACCTGTTCAATAGCTCATATATCGA...CAGAGGCCCAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCAATGCTATGCTCCCATTaGGAACACATGGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPMLCSH*EHMDGN
Trigger: GTTCCCATCCATGTGTTCCAAATGGGAGCATAGCAT...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGTTTCTAGTTTCCTGCTaGGTGGCAGGAAGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLFLVSC*VAGSLS
Trigger: ACTTAGGCTTCCTGCCACCAAGCAGGAAACTAGAAA...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCAAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPNLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTTGTTATGCAAGATGTCTTGGGCCGCCAGCCCGATGCCCTTGGTGGAAGGCACCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 5 (lower is better)
Translates to: VVMQDVLGRQPDALGGRHPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...GTGCCTTCCACCAAGGGCATCGGGCTGGCGGCCCAAGACATCTTGCATAACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp GCTGATGTAGACCATGATGTTGGTGGGCCCATGGGCCGGCGCGATCCAGAAGATCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ADVDHDVGGPMGRRDPEDPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...ATCTTCTGGATCGCGCCGGCCCATGGGCCCACCAACATCATGGTCTACATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp GATGTACCTGAACTGGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGAAGCACTCCAGCGCCTaGTTGATGTACCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: DVPELDDDAAAEHGQEYQKHSSA*LMYLNW
Trigger: CCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTT...CTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAGTTCAGGTACATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGAAATATAAGCAGGTCTaGGCCACTGACACATGTGTC +
Preference number: 5 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLKYKQV*ATDTCV
Trigger: GACACATGTGTCAGTGGCCAAGACCTGCTTATATTT...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCGAAGTACCTCGCCGCTaGGCACGCACGATGCCCTTC +
Preference number: 5 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTEVPRR*ARTMPF
Trigger: GAAGGGCATCGTGCGTGCCAAGCGGCGAGGTACTTC...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000559448.5
CDS-3UTR CAA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp GCACAGGCAGAGGGCTCTCTGACTGGACGGGTTGTTATGCAAGATGTCTTGGGCCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AQAEGSLTGRVVMQDVLGPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...GCCCAAGACATCTTGCATAACAACCCGTCCAGTCAGAGAGCCCTCTGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGTCCCCAAGGTTGAAATaGAACTCTTTGAACACCTGT +
Preference number: 5 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLSPRLK*NSLNTC
Trigger: ACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGA...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CTGGACGATGATGCTGCAGCCGAGCACGGCCAGGAGTACCAGGCACAGGCAGAGCCATCCAAGCTCCTATaGCAATCTAGTCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LDDDAAAEHGQEYQAQAEPSKLL*QSSLFS
Trigger: TGAAAACAGACTAGATTGCAATAGGAGCTTGGATGG...CTCTGCCTGTGCCTGGTACTCCTGGCCGTGCTCGGCTGCAGCATCATCGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp CCATGGGCCGGCGCGATCCAGAAGATGAGCAGCAGCAGCATGAGCAGCACGATGGACTGGGATTCCAAGTaGAAGACAGGCTTTTTATCC +
Preference number: 5 (lower is better)
Translates to: PWAGAIQKMSSSSMSSTMDWDSK*KTGFLS
Trigger: GGATAAAAAGCCTGTCTTCAACTTGGAATCCCAGTC...CATCGTGCTGCTCATGCTGCTGCTGCTCATCTTCTGGATCGCGCCGGCCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557930.1
CDS-3UTR CAA 90 bp CCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCTGGCCAACAGCCATaGCGATTGTGCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: PLLLHIQSRPETTSNAYSSGQQP*RLCQPT
Trigger: GGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGA...GGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 5 (lower is better)
Translates to: SAECQEHITPSEGDLSVRPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTVMQDV*GRQPDA
Trigger: GGCATCGGGCTGGCGGCCCAAGACATCTTGCATAAC...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGGCTGCAGAGGGCTGGCTGATTGTGTCCTTTAACTaGTTCCTGTATGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: ERWCQATVGDVWAAEGWLIVSFN*FLYDRV
Trigger: TACCCTGTCATACAGGAACAAGTTAAAGGACACAAT...CAGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp TGGCTGGGCCTCTGCTCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCAAGCCACATGTATTCTTaGAATATCTCACACCCCTTA +
Preference number: 5 (lower is better)
Translates to: WLGLCSGAEPCSPLSTRPSHMYS*NISHPL
Trigger: TAAGGGGTGTGAGATATTCAAAGAATACATGTGGCT...TGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGAGCAGAGGCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGTCTGGCCAACAGCCATaGCGATTGTGCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLSGQQP*RLCQPT
Trigger: GGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGA...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ACGACGGAGCCTGCACAGCTTAGCAGGCACCCCAACTTGCCCAAGATGTTGAGCAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TTEPAQLSRHPNLPKMLSNLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...GCTCAACATCTTGGGCAAGTTGGGGTGCCTGCTAAGCTGTGCAGGCTCCGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557930.1
ENST00000559448.5
CDS-3UTR CAA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACTCCACCAGGCCCACGTaGCTCCACTCCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHSTRPT*LHSRKR
Trigger: CCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGA...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGTCCCCAAGGTTGAAATaGAACTCTTTGAACACCTGT +
Preference number: 5 (lower is better)
Translates to: PMPLVEGTVKLPSKEQMLSPRLK*NSLNTC
Trigger: ACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGA...CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGTGCCAGGCAACCGTaGGGGACGTTTGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHGARQP*GTFGLQ
Trigger: CTGCAGCCCAAACGTCCCCAACGGTTGCCTGGCACC...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGTCAGGGTTGAGCTGCTaGGAAGCAGGAAGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWSGLSC*EAGSSA
Trigger: CGCTGAACTTCCTGCTTCCAAGCAGCTCAACCCTGA...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGTCAGGGTTGAGCTGCTaGGAAGCAGGAAGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLSGLSC*EAGSSA
Trigger: CGCTGAACTTCCTGCTTCCAAGCAGCTCAACCCTGA...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp GGCAAAACACCAAGACTCCATCCAATCCCGCCTGATGGACGAACAACGCCCTCGTTTCAACATGACCCTTaGGCACTAGTGGTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: GKTPRLHPIPPDGRTTPSFQHDP*ALVVWE
Trigger: CTCCCAAACCACTAGTGCCAAAGGGTCATGTTGAAA...CGAGGGCGTTGTTCGTCCATCAGGCGGGATTGGATGGAGTCTTGGTGTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCAACAGCCATTGCGATaGTGCCAGCCCACCACACAA +
Preference number: 5 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNQQPLR*CQPTTQ
Trigger: TTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTG...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAATCTGGCCAACAGCCATaGCGATTGTGCCAGCCCACC +
Preference number: 5 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKSGQQP*RLCQPT
Trigger: GGTGGGCTGGCACAATCGCAATGGCTGTTGGCCAGA...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACGCCAGCCCGATGCCCTaGGTGGAAGGCACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYASPMP*VEGTVK
Trigger: TTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGC...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTTCCACCAGGCCCACGTaGCTCCACTCCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISSTRPT*LHSRKR
Trigger: CCTCTTCCGGGAGTGGAGCAACGTGGGCCTGGTGGA...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp ACCGTGGTGAAATATGTGCATCACTTCATGCTATGCTCCCATTTGGAACACATGAACCGTTGGGGACGTTaGGGCTGCAGAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TVVKYVHHFMLCSHLEHMNRWGR*GCRGLA
Trigger: AGCCAGCCCTCTGCAGCCCAAACGTCCCCAACGGTT...CATGTGTTCCAAATGGGAGCATAGCATGAAGTGATGCACATATTTCACCACGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp CCGATGCCCTTGGTGGAAGGCACGGTGAAACTGCCCAGCAAGGAGCAGATGCTGATTGTGTCCTTTAACTaGTTCCTGTATGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: PMPLVEGTVKLPSKEQMLIVSFN*FLYDRV
Trigger: TACCCTGTCATACAGGAACAAGTTAAAGGACACAAT...CAGCATCTGCTCCTTGCTGGGCAGTTTCACCGTGCCTTCCACCAAGGGCATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp GAGATTCGTCTCATCAGAGAGAGATGGTGCCAGGCAACCGTTGGGGACGTTTGGTTTCAACATGACCCTTaGGCACTAGTGGTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: EIRLIRERWCQATVGDVWFQHDP*ALVVWE
Trigger: CTCCCAAACCACTAGTGCCAAAGGGTCATGTTGAAA...CCAAACGTCCCCAACGGTTGCCTGGCACCATCTCTCTCTGATGAGACGAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGAAATATAAGCAGGTCTaGGCCACTGACACATGTGTC +
Preference number: 5 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQKYKQV*ATDTCV
Trigger: GACACATGTGTCAGTGGCCAAGACCTGCTTATATTT...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAGTTTCTCTTCCGCCCTaGGCGCTAGAGTCAGCTACA +
Preference number: 5 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQVSLPP*ALESAT
Trigger: TGTAGCTGACTCTAGCGCCAAGGGCGGAAGAGAAAC...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS-3UTR CAA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 5 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCAAGCACTCCAGCGCCTaGTTGATGTACCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTKHSSA*LMYLNW
Trigger: CCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTT...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS GCA 90 bp AGGAAAAGACCAGACTTCGCCACACAGGCTACTTACTTGCGATTGTaGCAGCCCACCACACAATGTCTGTTAAATAGGAAGTACCTCGCC +
Preference number: 5 (lower is better)
Translates to: RKRPDFATQATYLRL*QPTTQCLLNRKYLA
Trigger: GGCGAGGTACTTCCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAAGTAAGTAGCCTGTGTGGCGAAGTCTGGTCTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS TCA 90 bp AGTAAGTCACAGGACTGGTCATTGTCACTTTACTCATGTCTGTGCTaGAGACGATCAGAAAACAGGAACGTCCGGGAGGAGGGCATACCA +
Preference number: 5 (lower is better)
Translates to: SKSQDWSLSLYSCLC*RRSENRNVREEGIP
Trigger: TGGTATGCCCTCCTCCCGGACGTTCCTGTTTTCTGATCGTCTTCAGCACAGACATGAGTAAAGTGACAATGACCAGTCCTGTGACTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560069.5
CDS-3UTR CAA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACCAACAGCCATTGCGATaGTGCCAGCCCACCACACAA +
Preference number: 5 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHQQPLR*CQPTTQ
Trigger: TTGTGTGGTGGGCTGGCACAATCGCAATGGCTGTTG...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: EDLFYFTSNHGQKPPPMPNLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...AGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWNLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGAACTTGCCCAAGATGTaGAGCTTTTCCTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLNLPKM*SFSFRR
Trigger: TCTCCTGAAGGAAAAGCTCAACATCTTGGGCAAGTT...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFVMQDV*GRQPDA
Trigger: GGCATCGGGCTGGCGGCCCAAGACATCTTGCATAAC...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp TCTGGTGCTGAGCCATGCTCCCCGCTATCCACCAGACCACCTGTTACTATCCAGGTTTTCATATTAGATTaGTTCATCTCCCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SGAEPCSPLSTRPPVTIQVFILD*FISPRL
Trigger: CAACCTTGGGGAGATGAACAAATCTAATATGAAAAC...CTGGATAGTAACAGGTGGTCTGGTGGATAGCGGGGAGCATGGCTCAGCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACATGCTATGCTCCCATTaGGAACACATGGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: LLHIQSRPETTSNAYSSNMLCSH*EHMDGN
Trigger: GTTCCCATCCATGTGTTCCAAATGGGAGCATAGCAT...GTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp TCGGCCGAATGTCAGGAGCACATCACACCATCGGAAGGTGATCTTTCTGTGCGGTGTTTTAGAAACAATTaGAAGAACCATCCCACCCCT +
Preference number: 5 (lower is better)
Translates to: SAECQEHITPSEGDLSVRCFRNN*KNHPTP
Trigger: AGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAACA...CCGCACAGAAAGATCACCTTCCGATGGTGTGATGTGCTCCTGACATTCGGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTAGTTCAGCATCAGGGTaGAGCTGCTTGGAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSSSASG*SCLEAG
Trigger: TCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACT...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTTGGCACTAGTGGTTaGGGAGCCCTGACATTCGCC +
Preference number: 5 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYFGTSG*GALTFA
Trigger: GGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAAA...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYSRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYVMQDV*GRQPDA
Trigger: GGCATCGGGCTGGCGGCCCAAGACATCTTGCATAAC...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp ACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCCATCCAAGCTCCTATaGCAATCTAGTCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: TARNHLQCLFLEPSKLLLPSKLL*QSSLFS
Trigger: TGAAAACAGACTAGATTGCAATAGGAGCTTGGATGG...CAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GACTGTTCAACCACTGGTCATGTCATTTACTTTGAGGCTGGTGTCACGTGCTTGATGCTATGCTCCCATTaGGAACACATGGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: DCSTTGHVIYFEAGVTCLMLCSH*EHMDGN
Trigger: GTTCCCATCCATGTGTTCCAAATGGGAGCATAGCAT...CAAGCACGTGACACCAGCCTCAAAGTAAATGACATGACCAGTGGTTGAACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTACTAGAATGGAAACCTaGGGGCCAAGGGCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISTRMET*GPRAPV
Trigger: GACAGGAGCCCTTGGCCCCAAGGTTTCCATTCTAGT...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437912.6
CDS-3UTR CAA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCCCAGCTCAGCCTGAGTaGTCACACTCTCAGACTTTG +
Preference number: 5 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSPAQPE*SHSQTL
Trigger: CAAAGTCTGAGAGTGTGACAACTCAGGCTGAGCTGG...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACGCCAGCCCGATGCCCTaGGTGGAAGGCACGGTGAAA +
Preference number: 5 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYASPMP*VEGTVK
Trigger: TTTCACCGTGCCTTCCACCAAGGGCATCGGGCTGGC...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCAAAGCACTCCAGCGCCTaGTTGATGTACCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSKHSSA*LMYLNW
Trigger: CCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTT...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAATCGATATATGAGCTATaGAACAGGTACTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQSIYEL*NRYSPT
Trigger: AGTGGGAGAGTACCTGTTCAATAGCTCATATATCGA...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGAGCCACATGTATTCTTaGAATATCTCACACCCCTTA +
Preference number: 5 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWSHMYS*NISHPL
Trigger: TAAGGGGTGTGAGATATTCAAAGAATACATGTGGCT...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp AGGATGCTCTGCCATTGCAAACAACAAGGAGATGGCTACATTTATTGGCTTTTTCACCCAGCACTTCCTTaGCTTTCTCAGCGCATGAGG +
Preference number: 5 (lower is better)
Translates to: RMLCHCKQQGDGYIYWLFHPALP*LSQRMR
Trigger: CCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTG...AAAAAGCCAATAAATGTAGCCATCTCCTTGTTGTTTGCAATGGCAGAGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp AACACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTAGCAGGCACCCCAACTaGCCCAAGATGTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: NTTTDTFTVQCQSSRQQSSRHPN*PKMLSF
Trigger: AAAGCTCAACATCTTGGGCAAGTTGGGGTGCCTGCT...AGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp ACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCATTCCCACAAACACTGGATaGGTCAGCTTTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TTDTFTVQCQSSRQQSLIPTNTG*VSFSSS
Trigger: GCTGGAGGAAAAGCTGACCAATCCAGTGTTTGTGGG...AATGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACGTTATGCAAGATGTCTaGGGCCGCCAGCCCGATGCC +
Preference number: 5 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYVMQDV*GRQPDA
Trigger: GGCATCGGGCTGGCGGCCCAAGACATCTTGCATAAC...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp GCCAGAAACCACCTCCAATGCCTATTCCTCGAACCATCCAAGCTCCTATTGCAAAATGGCCATGAATGCTaGCTGATAAAGAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: ARNHLQCLFLEPSKLLLQNGHEC*LIKNVD
Trigger: ATCCACATTCTTTATCAGCAAGCATTCATGGCCATT...TTGCAATAGGAGCTTGGATGGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCGTCATGTCATTTACTTaGAGGCTGGTGTCACGTGCT +
Preference number: 5 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSVMSFT*RLVSRA
Trigger: AGCACGTGACACCAGCCTCAAAGTAAATGACATGAC...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGGTCATGTCATTTACTTaGAGGCTGGTGTCACGTGCT +
Preference number: 5 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMVMSFT*RLVSRA
Trigger: AGCACGTGACACCAGCCTCAAAGTAAATGACATGAC...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp GTGTTACAATTGCCTGCGGTATTCAGTGCGGTCACATGCTGTACAGGTGTGTGGCAAGTACATGTACTTTaGGAAAGACCACTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: VLQLPAVFSAVTCCTGVWQVHVL*ERPLRD
Trigger: ATCTCTTAGTGGTCTTTCCAAAAGTACATGTACTTG...CCACACACCTGTACAGCATGTGACCGCACTGAATACCGCAGGCAATTGTAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCAAGTACATGTACTTTaGGAAAGACCACTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: SRTSSTSHPITARNHLQCQVHVL*ERPLRD
Trigger: ATCTCTTAGTGGTCTTTCCAAAAGTACATGTACTTG...GCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACTTTCTAGTTTCCTGCTaGGTGGCAGGAAGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHFLVSC*VAGSLS
Trigger: ACTTAGGCTTCCTGCCACCAAGCAGGAAACTAGAAA...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACCACCCAGCACTTCCTTaGCTTTCTCAGCGCATGAGG +
Preference number: 5 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYHPALP*LSQRMR
Trigger: CCTCATGCGCTGAGAAAGCAAAGGAAGTGCTGGGTG...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACTTTGGCACTAGTGGTTaGGGAGCCCTGACATTCGCC +
Preference number: 5 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYFGTSG*GALTFA
Trigger: GGCGAATGTCAGGGCTCCCAAACCACTAGTGCCAAA...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TTAACTTGTTCCTGTATGACAGGGTACTCGATATATGAGCTATTGAACAGGTACAAGCACTCCAGCGCCTaGTTGATGTACCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LTCSCMTGYSIYELLNRYKHSSA*LMYLNW
Trigger: CCAGTTCAGGTACATCAACAAGGCGCTGGAGTGCTT...GTACCTGTTCAATAGCTCATATATCGAGTACCCTGTCATACAGGAACAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp ACACGGAAGCTAATCCATGCTGTCGGGAACAGACCTTACACTGAAATGTTCTCTTCCCCAAGGTTGAAATaGAACTCTTTGAACACCTGT +
Preference number: 5 (lower is better)
Translates to: TRKLIHAVGNRPYTEMFSSPRLK*NSLNTC
Trigger: ACAGGTGTTCAAAGAGTTCAATTTCAACCTTGGGGA...AGAGAACATTTCAGTGTAAGGTCTGTTCCCGACAGCATGGATTAGCTTCCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TACTTCACATCCAATCACGGCCAGAAACCACCTCCAATGCCTATTCCTCGAACCAAAGAATATTCCTTATaGCTGAACAAAGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: YFTSNHGQKPPPMPIPRTKEYSL*LNKELR
Trigger: TCGCAGCTCTTTGTTCAGCAATAAGGAATATTCTTT...GGTTCGAGGAATAGGCATTGGAGGTGGTTTCTGGCCGTGATTGGATGTGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGAGTTCAGCATCAGGGTaGAGCTGCTTGGAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQSSASG*SCLEAG
Trigger: TCCTGCTTCCAAGCAGCTCAACCCTGATGCTGAACT...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ATCCACCAGACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTTGCTCAATGCTTGTaGAATGAACACATCTTTCTC +
Preference number: 5 (lower is better)
Translates to: IHQTTCYYPVNSNTMIEDLAQCL*NEHIFL
Trigger: GAGAAAGATGTGTTCATTCAACAAGCATTGAGCAAG...GTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGTCTGGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437912.6
CDS-3UTR CAA 90 bp TCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACGGCCAGAAAGTTTTCATATTAGATTaGTTCATCTCCCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SNTMIEDLFYFTSNHGQKVFILD*FISPRL
Trigger: CAACCTTGGGGAGATGAACAAATCTAATATGAAAAC...TTTCTGGCCGTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CACAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCCATCCAAGCTCCTATaGCAATCTAGTCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: HNYRHIHCTVPEFKTTISPSKLL*QSSLFS
Trigger: TGAAAACAGACTAGATTGCAATAGGAGCTTGGATGG...AGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCCCATCCAAGCTCCTATaGCAATCTAGTCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSPSKLL*QSSLFS
Trigger: TGAAAACAGACTAGATTGCAATAGGAGCTTGGATGG...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCAATCACAATGGCCATGAATGCTaGCTGATAAAGAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: PVNSNTMIEDLFYFTSNHNGHEC*LIKNVD
Trigger: ATCCACATTCTTTATCAGCAAGCATTCATGGCCATT...GTGATTGGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp CATGCTATGCTCCCATTTGGAACACATGGATGGGAACACTATAGACAGAGAATGATTGTGTCCTTTAACTaGTTCCTGTATGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: HAMLPFGTHGWEHYRQRMIVSFN*FLYDRV
Trigger: TACCCTGTCATACAGGAACAAGTTAAAGGACACAAT...CATTCTCTGTCTATAGTGTTCCCATCCATGTGTTCCAAATGGGAGCATAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACCTTCTCTGCAAGGATTaGGGCATCTGTCCGAACGGT +
Preference number: 5 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYLLCKD*GICPNG
Trigger: ACCGTTCGGACAGATGCCCAAATCCTTGCAGAGAAG...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS-3UTR CAA 90 bp ACCACCTGTTACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACGTTTTCATATTAGATTaGTTCATCTCCCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: TTCYYPVNSNTMIEDLFYVFILD*FISPRL
Trigger: CAACCTTGGGGAGATGAACAAATCTAATATGAAAAC...GTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTAACAGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
ENST00000561183.5
CDS-3UTR CAA 90 bp CAACTACAGACACATTCACTGTACAGTGCCAGAGTTCAAGACAACAATCTCTCAAATGGCCATGAATGCTaGCTGATAAAGAATGTGGAT +
Preference number: 5 (lower is better)
Translates to: QLQTHSLYSARVQDNNLSNGHEC*LIKNVD
Trigger: ATCCACATTCTTTATCAGCAAGCATTCATGGCCATT...TGAGAGATTGTTGTCTTGAACTCTGGCACTGTACAGTGAATGTGTCTGTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp CTACTTCACCTAATCTACTTTACCCAACCCCATCTTTCAACTTGGCGTAGTTCCAAAGAATATTCCTTATaGCTGAACAAAGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LLHLIYFTQPHLSTWRSSKEYSL*LNKELR
Trigger: TCGCAGCTCTTTGTTCAGCAATAAGGAATATTCTTT...GGAACTACGCCAAGTTGAAAGATGGGGTTGGGTAAAGTAGATTAGGTGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp TACTATCCAGTCAATTCTAACACCATGATCGAGGACCTCTTCTACTTCACATCCTGTTTTAGAAACAATTaGAAGAACCATCCCACCCCT +
Preference number: 5 (lower is better)
Translates to: YYPVNSNTMIEDLFYFTSCFRNN*KNHPTP
Trigger: AGGGGTGGGATGGTTCTTCAAATTGTTTCTAAAACA...GGATGTGAAGTAGAAGAGGTCCTCGATCATGGTGTTAGAATTGACTGGATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337435.9
ENST00000437912.6
CDS-3UTR CAA 90 bp ATGTTTGTAAACACAAATACTCACCACTGTGTTACAATTGCCTGCGGTATTCAGGTTTTCATATTAGATTaGTTCATCTCCCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: MFVNTNTHHCVTIACGIQVFILD*FISPRL
Trigger: CAACCTTGGGGAGATGAACAAATCTAATATGAAAAC...CTGAATACCGCAGGCAATTGTAACACAGTGGTGAGTATTTGTGTTTACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACTCGATATATGAGCTATaGAACAGGTACTCTCCCACT +
Preference number: 5 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYSIYEL*NRYSPT
Trigger: AGTGGGAGAGTACCTGTTCAATAGCTCATATATCGA...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000437912.6
ENST00000559448.5
CDS-3UTR CAA 90 bp GTTTTACTGTACCTTTCCTATGTTTGTAAACACAAATACTCACCACTGTGTTACGTGCTTGCTCAATGCTaGTTGAATGAACACATCTTT +
Preference number: 5 (lower is better)
Translates to: VLLYLSYVCKHKYSPLCYVLAQC*LNEHIF
Trigger: AAAGATGTGTTCATTCAACAAGCATTGAGCAAGCAC...GTAACACAGTGGTGAGTATTTGTGTTTACAAACATAGGAAAGGTACAGTAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437912.6
CDS GCA 72 bp ATAGGAAGTACCGGAGCGCGAAGCCCGGCGCGCCGCTaGAGAGATCGAAGGAGAGCCCTGGCGCTGGGCGTT +
Preference number: 6 (lower is better)
Translates to: IGSTGARSPARR*RDRRRALALGV
Trigger: AACGCCCAGCGCCAGGGCTCTCCTTCGATCTCTGCAGCGGCGCGCCGGGCTTCGCGCTCCGGTACTTCCTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS CCA 72 bp TGGCACGCACGATGCCCTTCTTCTGTAGCACGAACGTaGACCCGTTCACCAGGCTCGACACGACGGCCACGC +
Preference number: 6 (lower is better)
Translates to: WHARCPSSVART*TRSPGSTRRPR
Trigger: GCGTGGCCGTCGTGTCGAGCCTGGTGAACGGGTCCACGTTCGTGCTACAGAAGAAGGGCATCGTGCGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337435.9
ENST00000673033.1
ENST00000673341.1
CDS CAA 72 bp AGGAGAGCCCTGGCGCTGGGCGTTTCTCTTCCGCCCTaGGCGCTAGAGTCAGCTACATGGGGCTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: RRALALGVSLPP*ALESATWGSGL
Trigger: AAGCCCAGAGCCCCATGTAGCTGACTCTAGCGCCAAGGGCGGAAGAGAAACGCCCAGCGCCAGGGCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS CAA 90 bp AGAGATCGAAGGAGAGCCCTGGCGCTGGGCGTTTCTCTTCCGCCCTaGGCGCTAGAGTCAGCTACATGGGGCTCTGGGCTTGTGATCCCA +
Preference number: 6 (lower is better)
Translates to: RDRRRALALGVSLPP*ALESATWGSGLVIP
Trigger: TGGGATCACAAGCCCAGAGCCCCATGTAGCTGACTCTAGCGCCAAGGGCGGAAGAGAAACGCCCAGCGCCAGGGCTCTCCTTCGATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561183.5
CDS CCA 72 bp GCAGGGACATCCGAACTGAAAGGCACGCTTAGGGCCTaGGGAGAGGCCACGCGACACCCTCTTCCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: AGTSELKGTLRA*GEATRHPLPKN
Trigger: GTTCTTTGGAAGAGGGTGTCGCGTGGCCTCTCCCCAGGCCCTAAGCGTGCCTTTCAGTTCGGATGTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS CCA 72 bp CTCCAGCTCAGCCTGAGTCGTCACACTCTCAGACTTTaGGGAGTGGATAATCAGCACGACGGAGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: LQLSLSRHTLRL*GVDNQHDGACT
Trigger: TGTGCAGGCTCCGTCGTGCTGATTATCCACTCCCCAAAGTCTGAGAGTGTGACGACTCAGGCTGAGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673033.1
ENST00000673341.1
CDS GCA 72 bp TTAAATAGGAAGTACCTCGCCGCTTGGCACGCACGATaGCCTTCTTCTGTAGCACGAACGTGGACCCGTTCA +
Preference number: 6 (lower is better)
Translates to: LNRKYLAAWHAR*PSSVARTWTRS
Trigger: TGAACGGGTCCACGTTCGTGCTACAGAAGAAGGGCATCGTGCGTGCCAAGCGGCGAGGTACTTCCTATTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337435.9
ENST00000559448.5
ENST00000560105.1
ENST00000673033.1
ENST00000673341.1
CDS CAA 72 bp AATACACCCATCATGGACACACTTCTCTGCAAGGATTaGGGCATCTGTCCGAACGGTACTCCAAGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: NTPIMDTLLCKD*GICPNGTPRAP
Trigger: GGGCGCCCTTGGAGTACCGTTCGGACAGATGCCCAAATCCTTGCAGAGAAGTGTGTCCATGATGGGTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559448.5
CDS CCA 72 bp GGAACGTCCGGGAGGAGGGCATACCAGGCTCAGGTATaGACCGGATTACTTCCTTTAATACTGGGATTCCAA +
Preference number: 6 (lower is better)
Translates to: GTSGRRAYQAQV*TGLLPLILGFQ
Trigger: TTGGAATCCCAGTATTAAAGGAAGTAATCCGGTCCATACCTGAGCCTGGTATGCCCTCCTCCCGGACGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560069.5
CDS TCA 72 bp CAGGACTGGTCATTGTCACTTTACTCATGTCTGTGCTaGAGACGATCAGAAAACAGGAACGTCCGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: QDWSLSLYSCLC*RRSENRNVREE
Trigger: CTCCTCCCGGACGTTCCTGTTTTCTGATCGTCTTCAGCACAGACATGAGTAAAGTGACAATGACCAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560069.5
CDS GCA 72 bp CCAGACTTCGCCACACAGGCTACTTACTTGCGATTGTaGCAGCCCACCACACAATGTCTGTTAAATAGGAAG +
Preference number: 6 (lower is better)
Translates to: PDFATQATYLRL*QPTTQCLLNRK
Trigger: CTTCCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAAGTAAGTAGCCTGTGTGGCGAAGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS CAA 72 bp AGACCAGACTTCGCCACACAGGCTACTTACTTGCGATaGTGCCAGCCCACCACACAATGTCTGTTAAATAGG +
Preference number: 6 (lower is better)
Translates to: RPDFATQATYLR*CQPTTQCLLNR
Trigger: CCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAAGTAAGTAGCCTGTGTGGCGAAGTCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS CAA 72 bp AGGAAAAGACCAGACTTCGCCACACAGGCTACTTACTaGCGATTGTGCCAGCCCACCACACAATGTCTGTTA +
Preference number: 6 (lower is better)
Translates to: RKRPDFATQATY*RLCQPTTQCLL
Trigger: TAACAGACATTGTGTGGTGGGCTGGCACAATCGCAAGTAAGTAGCCTGTGTGGCGAAGTCTGGTCTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS CAA 90 bp GAAAGGAAAAGACCAGACTTCGCCACACAGGCTACTTACTTGCGATaGTGCCAGCCCACCACACAATGTCTGTTAAATAGGAAGTACCTC +
Preference number: 6 (lower is better)
Translates to: ERKRPDFATQATYLR*CQPTTQCLLNRKYL
Trigger: GAGGTACTTCCTATTTAACAGACATTGTGTGGTGGGCTGGCACAATCGCAAGTAAGTAGCCTGTGTGGCGAAGTCTGGTCTTTTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560105.1
CDS TCA 72 bp GACCGGATTACTTCCTTTAATACTGGGATTCCAAGTTaGAGACAGGCTTTTTATCCAGAACACCATCTGACA +
Preference number: 6 (lower is better)
Translates to: DRITSFNTGIPS*RQAFYPEHHLT
Trigger: TGTCAGATGGTGTTCTGGATAAAAAGCCTGTCTTCAACTTGGAATCCCAGTATTAAAGGAAGTAATCCGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560069.5