Pregenerated sensors for NIP7 (Homo sapiens)
Ensembl gene IDs: ENSG00000132603Ensembl transcript IDs: ENST00000254940.10, ENST00000254941.6, ENST00000562131.1, ENST00000563364.3, ENST00000565034.1, ENST00000569637.6
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGACCATGCTCAAGCTGCAAGACCTCTACACATCTCCATGTGCTaGAACTCCTCCAAGCACACTGTCAGGGACTCTGTGGGAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PDHAQAARPLHISMC*NSSKHTVRDSVGEK Trigger: CTTCTCTCCCACAGAGTCCCTGACAGTGTGCTTGGAGGAGTTTCAGCACATGGAGATGTGTAGAGGTCTTGCAGCTTGAGCATGGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| 3UTR-3UTR TCA 90 bp | ATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATCACATCTCCATGTGCTaGAACTCCTCCAAGCACACT | + |
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Preference number: 2 (lower is better) Translates to: IILHGQVNSSFSGPRCLHHISMC*NSSKHT Trigger: AGTGTGCTTGGAGGAGTTTCAGCACATGGAGATGTG...ATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACTTATGCTCTTCTACTTCGCTaGAGAAAACTAACCCTACGC | + |
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Preference number: 2 (lower is better) Translates to: ARLTALFLDPGVFIAATYALLLR*RKLTLR Trigger: GCGTAGGGTTAGTTTTCTCCAGCGAAGTAGAAGAGC...ATAAGTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| 3UTR-3UTR CCA 90 bp | ATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTTTCTGATCTCTAGCTaGGTCTCCCTAGGCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IILHGQVNSSFSGPRCLHFLISS*VSLGSS Trigger: AGAAGAGCCTAGGGAGACCCAGCTAGAGATCAGAAA...ATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| 3UTR-3UTR CCA 90 bp | TATTTTCTCAACTCTACAAGGATCATCCTCCATGGCCAGGTTAACAGCTCTTTTCTGTCAGGGACTCTGTaGGAGAGAAGCTGCCGGACA | + |
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Preference number: 2 (lower is better) Translates to: YFLNSTRIILHGQVNSSFLSGTL*ERSCRT Trigger: TGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGACAG...AAAAGAGCTGTTAACCTGGCCATGGAGGATGATCCTTGTAGAGTTGAGAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| 3UTR TCA 72 bp | GCTCAAGCTGCAAGACCTCTACACATCTCCATGTGCTaGAACTCCTCCAAGCACACTGTCAGGGACTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: AQAARPLHISMC*NSSKHTVRDSV Trigger: CACAGAGTCCCTGACAGTGTGCTTGGAGGAGTTTCAGCACATGGAGATGTGTAGAGGTCTTGCAGCTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| 3UTR TCA 72 bp | AGTAACTTTGGGAGGCACGGGGAAGGACAAAGGGACTaGATTTTTATGTCGTGGCCTCTGATCAGTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SNFGRHGEGQRD*IFMSWPLISAF Trigger: AAAAGCACTGATCAGAGGCCACGACATAAAAATTCAGTCCCTTTGTCCTTCCCCGTGCCTCCCAAAGTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| 3UTR CCA 72 bp | CTCATTCAAGGCCATATAGCTGGTAGGTGGCAGAAGTaGGGTTTGAACCCGTTTTTCTTCTATACCACACAC | + |
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Preference number: 3 (lower is better) Translates to: LIQGHIAGRWQK*GLNPFFFYTTH Trigger: GTGTGTGGTATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCCTTGAATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| 3UTR GCA 72 bp | ACCTATCATTTCCAAGGCACTGTACACTGTACTAGATaGTTTACAATCAGATGGAGTCTCACTCTGTCACGC | + |
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Preference number: 3 (lower is better) Translates to: TYHFQGTVHCTR*FTIRWSLTLSR Trigger: GCGTGACAGAGTGAGACTCCATCTGATTGTAAAGCATCTAGTACAGTGTACAGTGCCTTGGAAATGATAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| 3UTR TCA 72 bp | AAGGACAAAGGGACTGAATTTTTATGTCGTGGCCTCTaGTCAGTGCTTTTAGTCCAATCCAGTCAAGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: KDKGTEFLCRGL*SVLLVQSSQVS Trigger: ACTTACTTGACTGGATTGGACTAAAAGCACTGATCAGAGGCCACGACATAAAAATTCAGTCCCTTTGTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR GCA 90 bp | CTAACCCTACGCAGCCACATAGCATTCCTATCCCATAGCCCTGACCATGCTCAAAAGTCGGTCGCTCGCTaGTCCCCGGCAATCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LTLRSHIAFLSHSPDHAQKSVAR*SPAIPK Trigger: CTTTGGGATTGCCGGGGAGCAGCGAGCGACCGACTT...TTGAGCATGGTCAGGGCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | CTTCGCTGGAGAAAACTAACCCTACGCAGCCACATAGCATTCCTATCCCATAGCGACGGAAACAGTAGGTaGCATCGGGCCGGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LRWRKLTLRSHIAFLSHSDGNSR*HRAGPP Trigger: TGGTGGACCGGCCCGATGGCACCTACTGTTTCCGTC...GCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGTTAGTTTTCTCCAGCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | AGGATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCTGTCAGGGACTCTGTaGGAGAGAAGCTGCCGGACA | + |
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Preference number: 4 (lower is better) Translates to: RIILHGQVNSSFSGPRCLLSGTL*ERSCRT Trigger: TGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGACAG...AAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | ACCATGCTCAAGCTGCAAGACCTCTACACATCTCCATGTGCTGAAACTCCTCCAAGCAAGCCGGCCGGATaGGAAAGCATAGAGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: TMLKLQDLYTSPCAETPPSKPAG*ESIETG Trigger: TCCGGTCTCTATGCTTTCTCATCCGGCCGGCTTGCT...TGGAGGAGTTTCAGCACATGGAGATGTGTAGAGGTCTTGCAGCTTGAGCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | CATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACAATCTGCCTAATCCTTaGCTTCATCGCCCGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HGQVNSSFSGPRCLHCCHNLPNP*LHRPWQ Trigger: CTGCCACGGGCGATGAAGTCAAGGATTAGGCAGATT...GTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGACGGAAACAGTAGGTaGCATCGGGCCGGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYDGNSR*HRAGPP Trigger: TGGTGGACCGGCCCGATGGCACCTACTGTTTCCGTC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR GCA 90 bp | CTTCGCTGGAGAAAACTAACCCTACGCAGCCACATAGCATTCCTATCCCATAGCGTGAGATCGCACCACTaGACTCTAGCCTGGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: LRWRKLTLRSHIAFLSHSVRSHH*TLAWAT Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGTGCGATCTCAC...GCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGTTAGTTTTCTCCAGCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | CTAACCCTACGCAGCCACATAGCATTCCTATCCCATAGCCCTGACCATGCTCAACTGGAAAGTGGAGGCTaGAGTGAGATCGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: LTLRSHIAFLSHSPDHAQLESGG*SEIAPL Trigger: CAGTGGTGCGATCTCACTGCAGCCTCCACTTTCCAG...TTGAGCATGGTCAGGGCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | GCCCTGACCATGCTCAAGCTGCAAGACCTCTACACATCTCCATGTGCTGAAACTGCCTGGGCGACAGAGTaGAACTGTGTCAGGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ALTMLKLQDLYTSPCAETAWATE*NCVRKK Trigger: TTTCTTCCTGACACAGTTTCACTCTGTCGCCCAGGC...AGTTTCAGCACATGGAGATGTGTAGAGGTCTTGCAGCTTGAGCATGGTCAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATACGCCCAGGCTGGAGTaGAATGGCACCATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYTPRLE*NGTILA Trigger: AGCCAAGATGGTGCCATTGCACTCCAGCCTGGGCGT...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCTGTCACGCCCAGGCTaGAGTGCAATGGCACCATCT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYLSRPG*SAMAPS Trigger: AGATGGTGCCATTGCACTCCAGCCTGGGCGTGACAG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR GCA 90 bp | GCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACTTATCTGTGGGAGAGAAGCTaGCGGACAATCTGCCTAATC | + |
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Preference number: 4 (lower is better) Translates to: ARLTALFLDPGVFIAATYLWERS*RTICLI Trigger: GATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAG...ATAAGTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | GCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACTTATTCGTGCCTTGGTAACTaGAAACGGAAGTCGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: ARLTALFLDPGVFIAATYSCLGN*KRKSVA Trigger: AGCGACCGACTTCCGTTTCCAGTTACCAAGGCACGA...ATAAGTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | AGGATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCCGCCCCACAAACCTTaGCATAAGGTGCAAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: RIILHGQVNSSFSGPRCLPPHKP*HKVQGN Trigger: ATTACCTTGCACCTTATGCCAAGGTTTGTGGGGCGG...AAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | CTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACTTATTTGCTTTCTGATCCGCCCGTGGCAGAATTaGAAACCGCCCCACAAACCT | + |
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Preference number: 4 (lower is better) Translates to: LFFWTPVSSLLPLICFLIRPWQN*KPPHKP Trigger: AGGTTTGTGGGGCGGTTTCCAATTCTGCCACGGGCG...GATCAGAAAGCAAATAAGTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACTTTCTGATCTCTAGCTaGGTCTCCCTAGGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HGQVNSSFSGPRCLHCCHFLISS*VSLGSS Trigger: AGAAGAGCCTAGGGAGACCCAGCTAGAGATCAGAAA...GTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACAGAATCACTGGAAACTaGAAAGTGGAGGCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HGQVNSSFSGPRCLHCCHRITGN*KVEAAV Trigger: CACTGCAGCCTCCACTTTCCAGTTTCCAGTGATTCT...GTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | ACCATGCTCAAGCTGCAAGACCTCTACACATCTCCATGTGCTGAAACTCCTCCACGGTCCACCAGCAGTTaGAGATTCTCCCCAATGTAT | + |
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Preference number: 4 (lower is better) Translates to: TMLKLQDLYTSPCAETPPRSTSS*RFSPMY Trigger: ATACATTGGGGAGAATCTTCAACTGCTGGTGGACCG...TGGAGGAGTTTCAGCACATGGAGATGTGTAGAGGTCTTGCAGCTTGAGCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | ATTTGCTTTCTGATCTCTAGCTGGGTCTCCCTAGGCTCTTCTACTTCGCTGGAGCACATCTCCATGTGCTaGAACTCCTCCAAGCACACT | + |
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Preference number: 4 (lower is better) Translates to: ICFLISSWVSLGSSTSLEHISMC*NSSKHT Trigger: AGTGTGCTTGGAGGAGTTTCAGCACATGGAGATGTG...CTCCAGCGAAGTAGAAGAGCCTAGGGAGACCCAGCTAGAGATCAGAAAGCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATAACACCGGATCCTCGTaGCTTGGTAACTGGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYNTGSS*LGNWKR Trigger: CCGTTTCCAGTTACCAAGGCACGAGGATCCGGTGTT...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254940.10 |
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| CDS-3UTR GCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGCTCACTGCAAGCTCTaGTTCCCCAGTTCAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYAHCKL*FPSSSH Trigger: ATGGCTTGAACTGGGGAAGCAGAGCTTGCAGTGAGC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CCA 90 bp | AGGATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTAGGCACAAGAATCACTaGAAACTGGAAAGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RIILHGQVNSSFSGPRCLRHKNH*KLESGG Trigger: GCCTCCACTTTCCAGTTTCCAGTGATTCTTGTGCCT...AAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCGGTCCACCAGCAGTTaGAGATTCTCCCCAATGTAT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYRSTSS*RFSPMY Trigger: ATACATTGGGGAGAATCTTCAACTGCTGGTGGACCG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR TCA 90 bp | CTTCGCTGGAGAAAACTAACCCTACGCAGCCACATAGCATTCCTATCCCATAGCCACTTATTTGCTTTCTaGTCTCTAGCTGGGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LRWRKLTLRSHIAFLSHSHLFAF*SLAGSP Trigger: GGGAGACCCAGCTAGAGATCAGAAAGCAAATAAGTG...GCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGTTAGTTTTCTCCAGCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCCATACAGGAAGGACTaGTCTGCACCAGGCTTTATC | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYPYRKD*SAPGFI Trigger: GATAAAGCCTGGTGCAGAGCAGTCCTTCCTGTATGG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254940.10 |
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| CDS-3UTR GCA 90 bp | ATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATAGCTGCCGGACAATCTaGCTAATCCTTGACTTCATC | + |
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Preference number: 4 (lower is better) Translates to: IILHGQVNSSFSGPRCLHSCRTI*LILDFI Trigger: GATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCT...ATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR GCA 90 bp | ATTTGCTTTCTGATCTCTAGCTGGGTCTCCCTAGGCTCTTCTACTTCGCTGGAGCCCCGGTGTCTTCATTaGTGCCACTTATTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ICFLISSWVSLGSSTSLEPRCLH*CHLFAF Trigger: GAAAGCAAATAAGTGGCAGCAATGAAGACACCGGGG...CTCCAGCGAAGTAGAAGAGCCTAGGGAGACCCAGCTAGAGATCAGAAAGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGGTAGGTGGCAGAAGTaGGGTTTGAACCCGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYGRWQK*GLNPFF Trigger: GAAAAACGGGTTCAAACCCCACTTCTGCCACCTACC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CCA 90 bp | ATCATCCTCCATGGCCAGGTTAACAGCTCTTTTTCTGGACCCCGGTGTCTTCATGCTCTTCTACTTCGCTaGAGAAAACTAACCCTACGC | + |
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Preference number: 4 (lower is better) Translates to: IILHGQVNSSFSGPRCLHALLLR*RKLTLR Trigger: GCGTAGGGTTAGTTTTCTCCAGCGAAGTAGAAGAGC...ATGAAGACACCGGGGTCCAGAAAAAGAGCTGTTAACCTGGCCATGGAGGATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | TTGCTGCCACTTATTTGCTTTCTGATCTCTAGCTGGGTCTCCCTAGGCTCTTCTTGTAATCCCAGCTACTaGGGCACAAGAATCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLPLICFLISSWVSLGSSCNPSY*GTRITG Trigger: TCCAGTGATTCTTGTGCCTCAGTAGCTGGGATTACA...AGAAGAGCCTAGGGAGACCCAGCTAGAGATCAGAAAGCAAATAAGTGGCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCATATAGCTGGTAGGTaGCAGAAGTGGGGTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYHIAGR*QKWGLN Trigger: GTTCAAACCCCACTTCTGCCACCTACCAGCTATATG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCCACCCCAAAACCCTTaGCATAAGGTGCAAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYPPQNP*HKVQGN Trigger: ATTACCTTGCACCTTATGCCAAGGGTTTTGGGGTGG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000254941.6 |
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| CDS-3UTR TCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATACCACGCCCTGGTACTaGGAAGTATTTTCAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYTTPWY*EVFSVI Trigger: AATCACTGAAAATACTTCTCAGTACCAGGGCGTGGT...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000254940.10 |
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| CDS-3UTR TCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGGCAGAAGTGGGGTTTaGACCCGTTTTTCTTCTATA | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYGRSGV*TRFSSI Trigger: TATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR TCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATTTATGTCGTGGCCTCTaGTCAGTGCTTTTAGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYLCRGL*SVLLVQ Trigger: TTGGACTAAAAGCACTGATCAGAGGCCACGACATAA...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR TCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGAAGGACAAAGGGACTaGATTTTTATGTCGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYEGQRD*IFMSWP Trigger: AGGCCACGACATAAAAATTCAGTCCCTTTGTCCTTC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATTGCTTTACAATCAGATaGAGTCTCACTCTGTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYCFTIR*SLTLSR Trigger: GCGTGACAGAGTGAGACTCCATCTGATTGTAAAGCA...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR GCA 90 bp | TATTTTCTCAACTCTACAAGGATCATCCTCCATGGCCAGGTTAACAGCTCTTTTAACACCGGATCCTCGTaGCTTGGTAACTGGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: YFLNSTRIILHGQVNSSFNTGSS*LGNWKR Trigger: CCGTTTCCAGTTACCAAGGCACGAGGATCCGGTGTT...AAAAGAGCTGTTAACCTGGCCATGGAGGATGATCCTTGTAGAGTTGAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR TCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCCCAGCCTACAATCATaGTTTCTAATTCCAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYPSLQS*FLIPKI Trigger: GATTTTTGGAATTAGAAATCATGATTGTAGGCTGGG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR GCA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGTACACTGTACTAGATaGTTTACAATCAGATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYVHCTR*FTIRWS Trigger: ACTCCATCTGATTGTAAAGCATCTAGTACAGTGTAC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| 3UTR CAA 72 bp | TATTTAAAGAAATATTCTAAGGATCTTAAAGTAACTTaGGGAGGCACGGGGAAGGACAAAGGGACTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YLKKYSKDLKVT*GGTGKDKGTEF Trigger: AAATTCAGTCCCTTTGTCCTTCCCCGTGCCTCCCAAAGTTACTTTAAGATCCTTAGAATATTTCTTTAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS CCA 90 bp | CGCCCGAACGAACCGGTCTCCGGCACCGCGCCCCCACTCCACCCTTaGCCACCACACCCACACACTCCCGCGTCCGCCCCGCGCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPNEPVSGTAPPLHP*PPHPHTPASAPRAP Trigger: AGGAGCGCGCGGGGCGGACGCGGGAGTGTGTGGGTGTGGTGGCCAAGGGTGGAGTGGGGGCGCGGTGCCGGAGACCGGTTCGTTCGGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 90 bp | GGGCTCCTGGCGTCGCTGTTCCGGGACCGCTTCCCCGAGGCCCAGTaGCGCGAGCGGCCCGATGTGGGCCGCTACCTCCGGGAGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLASLFRDRFPEAQ*RERPDVGRYLRELS Trigger: GCTCAACTCCCGGAGGTAGCGGCCCACATCGGGCCGCTCGCGCCACTGGGCCTCGGGGAAGCGGTCCCGGAACAGCGACGCCAGGAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 90 bp | CGGCCACAGCAGCGGCTCTCGGCGAGGTGGAGGATGAAGGGCTCCTaGCGTCGCTGTTCCGGGACCGCTTCCCCGAGGCCCAGTGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPQQRLSARWRMKGS*RRCSGTASPRPSGA Trigger: CGCGCCACTGGGCCTCGGGGAAGCGGTCCCGGAACAGCGACGCCAGGAGCCCTTCATCCTCCACCTCGCCGAGAGCCGCTGCTGTGGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 90 bp | GCGGCGCCGAGTGCACCGAGCGCATCCACCGCCTGTTTGGCGACGTaGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTTGCCCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAPSAPSASTACLAT*RRRSAACSTVCPAS Trigger: GGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACTCGGCGCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 90 bp | ATCGGTAGCCACGGCCACAGCAGCGGCTCTCGGCGAGGTGGAGGATaGAGGGCTCCTGGCGTCGCTGTTCCGGGACCGCTTCCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IGSHGHSSGSRRGGG*RAPGVAVPGPLPRG Trigger: GCCTCGGGGAAGCGGTCCCGGAACAGCGACGCCAGGAGCCCTTCATCCTCCACCTCGCCGAGAGCCGCTGCTGTGGCCGTGGCTACCGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 90 bp | TGTTTGGCGACGTGGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTTaGCCAGCTTCCAGCAGAGCTGCAGGTGCGACGCGCCTGGCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLATWRRRSAACSTV*PASSRAAGATRLAL Trigger: TAGCGCCAGGCGCGTCGCACCTGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 90 bp | GCATCCACCGCCTGTTTGGCGACGTGGAGGCGTCGCTCGGCCGCCTaGTCGACCGTTTGCCCAGCTTCCAGCAGAGCTGCAGGTGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: ASTACLATWRRRSAA*STVCPASSRAAGAT Trigger: CGTCGCACCTGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGCGGTGGATGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 90 bp | GACTTGGCCTTCGCTAACTACAAGACCTTCATCCGCGGCGCCGAGTaGACCGAGCGCATCCACCGCCTGTTTGGCGACGTGGAGGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DLAFANYKTFIRGAE*TERIHRLFGDVEAS Trigger: CGACGCCTCCACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACTCGGCGCCGCGGATGAAGGTCTTGTAGTTAGCGAAGGCCAAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 90 bp | TGTCCTAAGTTCGGAGTCAGCGCCCCTTGTGGTCCGGAAGGGAAGTaGCGTTGTTGCTGGGAAGATGGCGACCGCGGCGACTATCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CPKFGVSAPCGPEGK*RCCWEDGDRGDYPI Trigger: GATGGGATAGTCGCCGCGGTCGCCATCTTCCCAGCAACAACGTCACTTCCCTTCCGGACCACAAGGGGCGCTGACTCCGAACTTAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 90 bp | GGATCCTCGTGCCTTGGTAACTGGAAACGGAAGTCGGTCGCTCGCTaGTCCCCGGCAATCCCAAAGCCTTCCTCTCTAGCCCCGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSSCLGNWKRKSVAR*SPAIPKPSSLAPYQ Trigger: TTGGTACGGGGCTAGAGAGGAAGGCTTTGGGATTGCCGGGGAGCAGCGAGCGACCGACTTCCGTTTCCAGTTACCAAGGCACGAGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563364.3 ENST00000569637.6 |
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| CDS TCA 90 bp | CGCCCAATAGTCTGGACGACCGCAGGGGAAAGCAAGCCGGCCGGATaGGAAAGCATAGAGACCGGAAATGTGCCTGTTTCTTCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPIVWTTAGESKPAG*ESIETGNVPVSSCP Trigger: AGGACAGGAAGAAACAGGCACATTTCCGGTCTCTATGCTTTCTCATCCGGCCGGCTTGCTTTCCCCTGCGGTCGTCCAGACTATTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563364.3 ENST00000569637.6 |
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| CDS-3UTR CAA 90 bp | ACCATGCTCAAGCTGCAAGACCTCTACACATCTCCATGTGCTGAAACTCCTCCACGGAGTCAGCGCCCCTaGTGGTCCGGAAGGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TMLKLQDLYTSPCAETPPRSQRP*WSGREV Trigger: CACTTCCCTTCCGGACCACAAGGGGCGCTGACTCCG...TGGAGGAGTTTCAGCACATGGAGATGTGTAGAGGTCTTGCAGCTTGAGCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS TCA 90 bp | AGGGACTCTGTGGGAGAGAAGCTGCCGGACAATCTGCCTAATCCTTaGCTTCATCGCCCGTGGCAGAATTGGAAACCGCCCCACAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: RDSVGEKLPDNLPNP*LHRPWQNWKPPHKP Trigger: AGGTTTGTGGGGCGGTTTCCAATTCTGCCACGGGCGATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAGAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS GCA 90 bp | AGCACACTGTCAGGGACTCTGTGGGAGAGAAGCTGCCGGACAATCTaGCTAATCCTTGACTTCATCGCCCGTGGCAGAATTGGAAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: STLSGTLWERSCRTI*LILDFIARGRIGNR Trigger: GCGGTTTCCAATTCTGCCACGGGCGATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGACAGTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS GCA 90 bp | GAAACTCCTCCAAGCACACTGTCAGGGACTCTGTGGGAGAGAAGCTaGCGGACAATCTGCCTAATCCTTGACTTCATCGCCCGTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ETPPSTLSGTLWERS*RTICLILDFIARGR Trigger: TCTGCCACGGGCGATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGACAGTGTGCTTGGAGGAGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS-3UTR CAA 90 bp | CTAACCCTACGCAGCCACATAGCATTCCTATCCCATAGCCCTGACCATGCTCAACCCAGCGACACCAGCTaGTCCCCGGAAATATTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTLRSHIAFLSHSPDHAQPSDTS*SPEILA Trigger: CGCCAATATTTCCGGGGACAAGCTGGTGTCGCTGGG...TTGAGCATGGTCAGGGCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CAA 90 bp | ACCCTACGCAGCCACATAGCATTCCTATCCCATAGCCCTGACCATGCTCAAGCTCCGGATCCTCGTGCCTaGGTAACTGGAAACGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLRSHIAFLSHSPDHAQAPDPRA*VTGNGS Trigger: ACTTCCGTTTCCAGTTACCAAGGCACGAGGATCCGG...AGCTTGAGCATGGTCAGGGCTATGGGATAGGAATGCTATGTGGCTGCGTAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CAA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCCCAGCGACACCAGCTaGTCCCCGGAAATATTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYPSDTS*SPEILA Trigger: CGCCAATATTTCCGGGGACAAGCTGGTGTCGCTGGG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS CCA 90 bp | TCTCCATGTGCTGAAACTCCTCCAAGCACACTGTCAGGGACTCTGTaGGAGAGAAGCTGCCGGACAATCTGCCTAATCCTTGACTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SPCAETPPSTLSGTL*ERSCRTICLILDFI Trigger: GATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGACAGTGTGCTTGGAGGAGTTTCAGCACATGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS-3UTR CAA 90 bp | CTCTTTTTCTGGACCCCGGTGTCTTCATTGCTGCCACTTATTTGCTTTCTGATCTCGCCCGTGGCAGAATaGGAAACCGCCCCACAAACC | + |
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Preference number: 5 (lower is better) Translates to: LFFWTPVSSLLPLICFLISPVAE*ETAPQT Trigger: GGTTTGTGGGGCGGTTTCCAATTCTGCCACGGGCGA...GATCAGAAAGCAAATAAGTGGCAGCAATGAAGACACCGGGGTCCAGAAAAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS-3UTR CAA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATCCGGATCCTCGTGCCTaGGTAACTGGAAACGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYPDPRA*VTGNGS Trigger: ACTTCCGTTTCCAGTTACCAAGGCACGAGGATCCGG...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254940.10 |
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| CDS-3UTR CAA 90 bp | AGAATCACTGGAAACTGGAAAGTGGAGGCTGCAGTGAGATCGCACCACTGCACTACCCCGGTGTCTTCATaGCTGCCACTTATTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RITGNWKVEAAVRSHHCTTPVSS*LPLICF Trigger: AAAGCAAATAAGTGGCAGCAATGAAGACACCGGGGT...AGTGCAGTGGTGCGATCTCACTGCAGCCTCCACTTTCCAGTTTCCAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569637.6 |
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| CDS CCA 90 bp | AGAACTGGTTACCCAGAAGCACGTCCCTCCCTCGAAGGGCAGTTGTaGGCACAAAGAAAAAGGATTCATGCAAAGCTCTTATTATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTGYPEARPSLEGQL*AQRKRIHAKLLLSG Trigger: ACCCGATAATAAGAGCTTTGCATGAATCCTTTTTCTTTGTGCCCACAACTGCCCTTCGAGGGAGGGACGTGCTTCTGGGTAACCAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS-3UTR CAA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATGATCTTAAAGTAACTTaGGGAGGCACGGGGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYDLKVT*GGTGKD Trigger: GTCCTTCCCCGTGCCTCCCAAAGTTACTTTAAGATC...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CAA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATTACAGCCGTCTGTCCTaGGAATGGCTTCGTTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYYSRLS*EWLRFK Trigger: CTTAAAACGAAGCCATTCCAAGGACAGACGGCTGTA...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS-3UTR CAA 90 bp | GGCCATATAGCTGGTAGGTGGCAGAAGTGGGGTTTGAACCCGTTTTTCTTCTATTGGCAGAAGTGGGGTTaGAACCCGTTTTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHIAGRWQKWGLNPFFFYWQKWG*NPFFFY Trigger: ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCA...ATAGAAGAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000254940.10 ENST00000254941.6 |
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| CDS GCA 90 bp | TCCCTCCCTCGAAGGGCAGTTGTGGGCACAAAGAAAAAGGATTCATaGAAAGCTCTTATTATCGGGTCTGACACAGTTAACATTATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPRRAVVGTKKKDS*KALIIGSDTVNIIG Trigger: ACCTATAATGTTAACTGTGTCAGACCCGATAATAAGAGCTTTGCATGAATCCTTTTTCTTTGTGCCCACAACTGCCCTTCGAGGGAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 90 bp | GAGAATTTATTCTCTCAAGCACTCAGATTGAAGACATACCCTTCTTaGATAAGAGTACTTGAGTTCTGTAACAGCTACCATCTCTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ENLFSQALRLKTYPS*IRVLEFCNSYHLYS Trigger: TGAGTAGAGATGGTAGCTGTTACAGAACTCAAGTACTCTTATTCAAGAAGGGTATGTCTTCAATCTGAGTGCTTGAGAGAATAAATTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565034.1 |
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| CDS CAA 90 bp | GCCCAGTGGCGCGAGCGGCCCGATGTGGGCCGCTACCTCCGGGAGTaGAGCGGCTCGGGGCTGGAGCGGCTGCGGCGCGAGCCCGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AQWRERPDVGRYLRE*SGSGLERLRREPER Trigger: GCGCTCGGGCTCGCGCCGCAGCCGCTCCAGCCCCGAGCCGCTCAACTCCCGGAGGTAGCGGCCCACATCGGGCCGCTCGCGCCACTGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 72 bp | GCGAGCGGCCCGATGTGGGCCGCTACCTCCGGGAGTTaGGCGGCTCGGGGCTGGAGCGGCTGCGGCGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGPMWAATSGS*AARGWSGCGAS Trigger: GCTCGCGCCGCAGCCGCTCCAGCCCCGAGCCGCTCAACTCCCGGAGGTAGCGGCCCACATCGGGCCGCTCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 72 bp | CGCGAGCGGCCCGATGTGGGCCGCTACCTCCGGGAGTaGAGCGGCTCGGGGCTGGAGCGGCTGCGGCGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RERPDVGRYLRE*SGSGLERLRRE Trigger: CTCGCGCCGCAGCCGCTCCAGCCCCGAGCCGCTCAACTCCCGGAGGTAGCGGCCCACATCGGGCCGCTCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 90 bp | GCGCCCGAACGAACCGGTCTCCGGCACCGCGCCCCCACTCCACCCTaGGCCACCACACCCACACACTCCCGCGTCCGCCCCGCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: APERTGLRHRAPTPP*ATTPTHSRVRPARS Trigger: GGAGCGCGCGGGGCGGACGCGGGAGTGTGTGGGTGTGGTGGCCAAGGGTGGAGTGGGGGCGCGGTGCCGGAGACCGGTTCGTTCGGGCGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | GCGTCGCTGTTCCGGGACCGCTTCCCCGAGGCCCAGTaGCGCGAGCGGCCCGATGTGGGCCGCTACCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLFRDRFPEAQ*RERPDVGRYLR Trigger: CCGGAGGTAGCGGCCCACATCGGGCCGCTCGCGCCACTGGGCCTCGGGGAAGCGGTCCCGGAACAGCGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | GAACCGGTCTCCGGCACCGCGCCCCCACTCCACCCTTaGCCACCACACCCACACACTCCCGCGTCCGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EPVSGTAPPLHP*PPHPHTPASAP Trigger: CGGGGCGGACGCGGGAGTGTGTGGGTGTGGTGGCCAAGGGTGGAGTGGGGGCGCGGTGCCGGAGACCGGTTC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 72 bp | GCGGCGCCGAGTGCACCGAGCGCATCCACCGCCTGTTaGGCGACGTGGAGGCGTCGCTCGGCCGCCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AAPSAPSASTAC*ATWRRRSAACS Trigger: CGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACTCGGCGCCGC 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | CGGCGCCGAGTGCACCGAGCGCATCCACCGCCTGTTTaGCGACGTGGAGGCGTCGCTCGGCCGCCTGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRVHRAHPPPV*RRGGVARPPAR Trigger: TCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACTCGGCGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | CAGCGGCTCTCGGCGAGGTGGAGGATGAAGGGCTCCTaGCGTCGCTGTTCCGGGACCGCTTCCCCGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRLSARWRMKGS*RRCSGTASPRP Trigger: GGGCCTCGGGGAAGCGGTCCCGGAACAGCGACGCCAGGAGCCCTTCATCCTCCACCTCGCCGAGAGCCGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 90 bp | CCTTCATCCGCGGCGCCGAGTGCACCGAGCGCATCCACCGCCTGTTaGGCGACGTGGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSAAPSAPSASTAC*ATWRRRSAACSTVC Trigger: GCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACTCGGCGCCGCGGATGAAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 72 bp | ACGTGGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTTaGCCAGCTTCCAGCAGAGCTGCAGGTGCGACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TWRRRSAACSTV*PASSRAAGATR Trigger: GCGCGTCGCACCTGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 72 bp | GACGTGGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTaGCCCAGCTTCCAGCAGAGCTGCAGGTGCGACGCG | + |
|
Preference number: 6 (lower is better) Translates to: DVEASLGRLLDR*PSFQQSCRCDA Trigger: CGCGTCGCACCTGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 90 bp | CTGTTTGGCGACGTGGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTaGCCCAGCTTCCAGCAGAGCTGCAGGTGCGACGCGCCTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LFGDVEASLGRLLDR*PSFQQSCRCDAPGA Trigger: AGCGCCAGGCGCGTCGCACCTGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 72 bp | CACGGCCACAGCAGCGGCTCTCGGCGAGGTGGAGGATaGAGGGCTCCTGGCGTCGCTGTTCCGGGACCGCTT | + |
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Preference number: 6 (lower is better) Translates to: HGHSSGSRRGGG*RAPGVAVPGPL Trigger: AAGCGGTCCCGGAACAGCGACGCCAGGAGCCCTTCATCCTCCACCTCGCCGAGAGCCGCTGCTGTGGCCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | AGTGCACCGAGCGCATCCACCGCCTGTTTGGCGACGTaGAGGCGTCGCTCGGCCGCCTGCTCGACCGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SAPSASTACLAT*RRRSAACSTVC Trigger: GCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 72 bp | GCCTGTTTGGCGACGTGGAGGCGTCGCTCGGCCGCCTaGTCGACCGTTTGCCCAGCTTCCAGCAGAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ACLATWRRRSAA*STVCPASSRAA Trigger: TGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCGGCCGAGCGACGCCTCCACGTCGCCAAACAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 72 bp | TTCGGAGTCAGCGCCCCTTGTGGTCCGGAAGGGAAGTaGCGTTGTTGCTGGGAAGATGGCGACCGCGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: FGVSAPCGPEGK*RCCWEDGDRGD Trigger: GTCGCCGCGGTCGCCATCTTCCCAGCAACAACGTCACTTCCCTTCCGGACCACAAGGGGCGCTGACTCCGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 72 bp | CGCCTGCTCGACCGTTTGCCCAGCTTCCAGCAGAGCTaGAGGTGCGACGCGCCTGGCGCTAAAGGGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RLLDRLPSFQQS*RCDAPGAKGVL Trigger: TAAAACCCCTTTAGCGCCAGGCGCGTCGCACCTGCAGCTCTGCTGGAAGCTGGGCAAACGGTCGAGCAGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 72 bp | TTCGCTAACTACAAGACCTTCATCCGCGGCGCCGAGTaGACCGAGCGCATCCACCGCCTGTTTGGCGACGTG | + |
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Preference number: 6 (lower is better) Translates to: FANYKTFIRGAE*TERIHRLFGDV Trigger: CACGTCGCCAAACAGGCGGTGGATGCGCTCGGTGCACTCGGCGCCGCGGATGAAGGTCTTGTAGTTAGCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 72 bp | CAGCGCCCCTTGTGGTCCGGAAGGGAAGTGACGTTGTaGCTGGGAAGATGGCGACCGCGGCGACTATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: QRPLWSGREVTL*LGRWRPRRLSH Trigger: ATGGGATAGTCGCCGCGGTCGCCATCTTCCCAGCAACAACGTCACTTCCCTTCCGGACCACAAGGGGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 72 bp | AGTCAGCGCCCCTTGTGGTCCGGAAGGGAAGTGACGTaGTTGCTGGGAAGATGGCGACCGCGGCGACTATCC | + |
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Preference number: 6 (lower is better) Translates to: SQRPLWSGREVT*LLGRWRPRRLS Trigger: GGATAGTCGCCGCGGTCGCCATCTTCCCAGCAACAACGTCACTTCCCTTCCGGACCACAAGGGGCGCTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 72 bp | TGCCTTGGTAACTGGAAACGGAAGTCGGTCGCTCGCTaGTCCCCGGCAATCCCAAAGCCTTCCTCTCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLGNWKRKSVAR*SPAIPKPSSLA Trigger: GGCTAGAGAGGAAGGCTTTGGGATTGCCGGGGAGCAGCGAGCGACCGACTTCCGTTTCCAGTTACCAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563364.3 ENST00000569637.6 |
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| CDS TCA 72 bp | CATGTTGGCTGGGATGGTCTCGATCTTTTGATGTCGTaGTCTGTCCGCCTCGGCCTCCCAAAGCGCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: HVGWDGLDLLMS*SVRLGLPKRWD Trigger: ATCCCAGCGCTTTGGGAGGCCGAGGCGGACAGATCACGACATCAAAAGATCGAGACCATCCCAGCCAACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 72 bp | GTCTGGACGACCGCAGGGGAAAGCAAGCCGGCCGGATaGGAAAGCATAGAGACCGGAAATGTGCCTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VWTTAGESKPAG*ESIETGNVPVS Trigger: AGAAACAGGCACATTTCCGGTCTCTATGCTTTCTCATCCGGCCGGCTTGCTTTCCCCTGCGGTCGTCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563364.3 ENST00000569637.6 |
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| CDS TCA 72 bp | GTGGGAGAGAAGCTGCCGGACAATCTGCCTAATCCTTaGCTTCATCGCCCGTGGCAGAATTGGAAACCGCCC | + |
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Preference number: 6 (lower is better) Translates to: VGEKLPDNLPNP*LHRPWQNWKPP Trigger: GGGCGGTTTCCAATTCTGCCACGGGCGATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS TCA 72 bp | GGTTTCAGCATGTTGGCTGGGATGGTCTCGATCTTTTaGTGTCGTGATCTGTCCGCCTCGGCCTCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GFSMLAGMVSIF*CRDLSASASQS Trigger: GCTTTGGGAGGCCGAGGCGGACAGATCACGACATCAAAAGATCGAGACCATCCCAGCCAACATGCTGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS GCA 72 bp | CCAAGCACACTGTCAGGGACTCTGTGGGAGAGAAGCTaGCGGACAATCTGCCTAATCCTTGACTTCATCGCC | + |
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Preference number: 6 (lower is better) Translates to: PSTLSGTLWERS*RTICLILDFIA Trigger: GGCGATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGACAGTGTGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS GCA 72 bp | TCAGGGACTCTGTGGGAGAGAAGCTGCCGGACAATCTaGCTAATCCTTGACTTCATCGCCCGTGGCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: SGTLWERSCRTI*LILDFIARGRI Trigger: AATTCTGCCACGGGCGATGAAGTCAAGGATTAGGCAGATTGTCCGGCAGCTTCTCTCCCACAGAGTCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000562131.1 ENST00000569637.6 |
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| CDS CAA 72 bp | GGTTACCCAGAAGCACGTCCCTCCCTCGAAGGGCAGTaGTGGGCACAAAGAAAAAGGATTCATGCAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GYPEARPSLEGQ*WAQRKRIHAKL Trigger: GAGCTTTGCATGAATCCTTTTTCTTTGTGCCCACAACTGCCCTTCGAGGGAGGGACGTGCTTCTGGGTAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 72 bp | GCGTGGACCGGAGGTCATCTGCTTCAAAACTTCCATTaGCGGGAAGGTGACAAGGAAATCCTCGCATTTGAG | + |
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Preference number: 6 (lower is better) Translates to: AWTGGHLLQNFH*REGDKEILAFE Trigger: CTCAAATGCGAGGATTTCCTTGTCACCTTCCCGTCAATGGAAGTTTTGAAGCAGATGACCTCCGGTCCACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | TACCCAGAAGCACGTCCCTCCCTCGAAGGGCAGTTGTaGGCACAAAGAAAAAGGATTCATGCAAAGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: YPEARPSLEGQL*AQRKRIHAKLL Trigger: TAAGAGCTTTGCATGAATCCTTTTTCTTTGTGCCCACAACTGCCCTTCGAGGGAGGGACGTGCTTCTGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CCA 72 bp | TTTAGTAGAGACGGGGTTTCAGCATGTTGGCTGGGATaGTCTCGATCTTTTGATGTCGTGATCTGTCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSRDGVSACWLG*SRSFDVVICPP Trigger: AGGCGGACAGATCACGACATCAAAAGATCGAGACCATCCCAGCCAACATGCTGAAACCCCGTCTCTACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 90 bp | TTCAGAACTGGTTACCCAGAAGCACGTCCCTCCCTCGAAGGGCAGTaGTGGGCACAAAGAAAAAGGATTCATGCAAAGCTCTTATTATCG | + |
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Preference number: 6 (lower is better) Translates to: FRTGYPEARPSLEGQ*WAQRKRIHAKLLLS Trigger: CGATAATAAGAGCTTTGCATGAATCCTTTTTCTTTGTGCCCACAACTGCCCTTCGAGGGAGGGACGTGCTTCTGGGTAACCAGTTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS CAA 72 bp | TCCATTGACGGGAAGGTGACAAGGAAATCCTCGCATTaGAGGGCATCAGATATCAAAAAGTCTCTCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: SIDGKVTRKSSH*RASDIKKSLHL Trigger: CAAATGGAGAGACTTTTTGATATCTGATGCCCTCAAATGCGAGGATTTCCTTGTCACCTTCCCGTCAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563364.3 |
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| CDS TCA 72 bp | TTCTCTCAAGCACTCAGATTGAAGACATACCCTTCTTaGATAAGAGTACTTGAGTTCTGTAACAGCTACCAT | + |
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Preference number: 6 (lower is better) Translates to: FSQALRLKTYPS*IRVLEFCNSYH Trigger: ATGGTAGCTGTTACAGAACTCAAGTACTCTTATTCAAGAAGGGTATGTCTTCAATCTGAGTGCTTGAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565034.1 |
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