RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NINL (Homo sapiens)

Ensembl gene IDs: ENSG00000101004

Ensembl transcript IDs: ENST00000278886.11, ENST00000336104.5, ENST00000422516.5, ENST00000461642.2, ENST00000464285.5, ENST00000489780.5, ENST00000496509.2

Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAGCCAGGGTCGGAAGCACCACATGGAAAGTGCTGTCCATAACTaGTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTC +
Preference number: 1 (lower is better)
Translates to: DSQGRKHHMESAVHN*SLTCSLLTAPRIWL
Trigger: GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACTTTCCATGTGGTGCTTCCGACCCTGGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR GCA 90 bp CGGAAGCACCACATGGAAAGTGCTGTCCATAACTGCTCACTTACCTaGTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCA +
Preference number: 1 (lower is better)
Translates to: RKHHMESAVHNCSLT*SLLTAPRIWLQRVA
Trigger: TGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACTTTCCATGTGGTGCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR GCA 90 bp GCCCCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTaGGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTC +
Preference number: 1 (lower is better)
Translates to: APTSILPRADHSLTI*GVNKESQSSDVPGL
Trigger: GAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR TCA 90 bp ACATGGAAAGTGCTGTCCATAACTGCTCACTTACCTGCTCCTTGCTaGCAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGGAA +
Preference number: 1 (lower is better)
Translates to: TWKVLSITAHLPAPC*QLPGSGSREWQNWE
Trigger: TTCCCAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACTTTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR CCA 90 bp CATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTaGCTCCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATT +
Preference number: 1 (lower is better)
Translates to: HNCSLTCSLLTAPRI*LQRVAKLGILPREI
Trigger: AATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCCCCCACCTCCATCTTaGCCAGGGCAGACCATTCAT +
Preference number: 2 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLPPPPS*PGQTIH
Trigger: ATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGGGG...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR TCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGAGGACTCATGGCTCATaGCCCACGGAATCTAAGGCA +
Preference number: 2 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLRTHGS*PTESKA
Trigger: TGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCT...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR CAA 90 bp CACCACATGGAAAGTGCTGTCCATAACTGCTCACTTACCTGCTCCTaGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTG +
Preference number: 2 (lower is better)
Translates to: HHMESAVHNCSLTCS*LTAPRIWLQRVAKL
Trigger: CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACTTTCCATGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTACCCCCACCTCCATCTTaGCCAGGGCAGACCATTCAT +
Preference number: 2 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLPPPPS*PGQTIH
Trigger: ATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGGGG...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCCGGCTTCTGCAACATaGATATTCCCCCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNPASAT*IFPQPP
Trigger: TGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGAGCAGAACAGTGAAATaGCAAAACTGTACAGAGCCC +
Preference number: 2 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMSRTVK*QNCTEP
Trigger: GGGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCT...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCATTCATTAACTATCTaGGGGGTGAACAAAGAATCC +
Preference number: 2 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLHSLTI*GVNKES
Trigger: GGATTCTTTGTTCACCCCGCAGATAGTTAATGAATG...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATCCGGCTTCTGCAACATaGATATTCCCCCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: REWQNWEFCQGKLLRTANPASAT*IFPQPP
Trigger: TGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGG...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR TCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTAGGACTCATGGCTCATaGCCCACGGAATCTAAGGCA +
Preference number: 2 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPARTHGS*PTESKA
Trigger: TGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCT...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCAACTGCTCACTTACCTaGTCCTTGCTGACAGCTCCC +
Preference number: 2 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSNCSLT*SLLTAP
Trigger: GGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTT...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR CCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTATGTCCCAGGACTCATaGCTCATGACCCACGGAATC +
Preference number: 2 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAMSQDS*LMTHGI
Trigger: GATTCCGTGGGTCATGAGCCATGAGTCCTGGGACAT...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAAAAAACGCCGGCTTCTaGAACATGCATATTCCCCCA +
Preference number: 2 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLKNAGF*NMHIPP
Trigger: TGGGGGAATATGCATGTTGCAGAAGCCGGCGTTTTT...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCCAAAACTGGGAATTTTaGCAAGGGAAATTACTCAGG +
Preference number: 2 (lower is better)
Translates to: LYRALTLHFTLTARVGSTQNWEF*QGKLLR
Trigger: CCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTG...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR CCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCAGCAGAACAGTGAAATaGCAAAACTGTACAGAGCCC +
Preference number: 2 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSSRTVK*QNCTEP
Trigger: GGGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCT...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR TCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCTTTACATTTCACTCTaGCAGCCAGGGTCGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRALYISL*QPGSEA
Trigger: TGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCAAAAACGCCGGCTTCTaGAACATGCATATTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAKNAGF*NMHIPP
Trigger: TGGGGGAATATGCATGTTGCAGAAGCCGGCGTTTTT...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR TCA 72 bp CCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTaGAGCCTTTTCTGGAATGTGTGTACGCACCCTCCA +
Preference number: 3 (lower is better)
Translates to: PLLSRWVDVPSE*SLFWNVCTHPP
Trigger: TGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR TCA 72 bp GTGCTGTCCATAACTGCTCACTTACCTGCTCCTTGCTaGCAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAA +
Preference number: 3 (lower is better)
Translates to: VLSITAHLPAPC*QLPGSGSREWQ
Trigger: TTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR GCA 72 bp CACATGGAAAGTGCTGTCCATAACTGCTCACTTACCTaGTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: HMESAVHNCSLT*SLLTAPRIWLQ
Trigger: CTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACTTTCCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR CCA 72 bp CAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTaGGAATTTTGCCAAGGGAAATTACTCAGGACCGCT +
Preference number: 3 (lower is better)
Translates to: QLPGSGSREWQN*EFCQGKLLRTA
Trigger: AGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR CCA 72 bp TCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTaGCTCCAGAGAGTGGCAAAACTGGGAATTTTGCCA +
Preference number: 3 (lower is better)
Translates to: SLTCSLLTAPRI*LQRVAKLGILP
Trigger: TGGCAAAATTCCCAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR CCA 72 bp CATTTCACTCTGACAGCCAGGGTCGGAAGCACCACATaGAAAGTGCTGTCCATAACTGCTCACTTACCTGCT +
Preference number: 3 (lower is better)
Translates to: HFTLTARVGSTT*KVLSITAHLPA
Trigger: AGCAGGTAAGTGAGCAGTTATGGACAGCACTTTCCATGTGGTGCTTCCGACCCTGGCTGTCAGAGTGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR GCA 72 bp TCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTaGGGGGTGAACAAAGAATCCCAATCCTCAGATGTC +
Preference number: 3 (lower is better)
Translates to: SILPRADHSLTI*GVNKESQSSDV
Trigger: GACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
3UTR-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCGCAAAACTGGGAATTTaGCCAAGGGAAATTACTCAG +
Preference number: 3 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSAKLGI*PREITQ
Trigger: CTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGC...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAGCGGCCCTCTGCCTGTaGGCCTGCTCCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPAALCL*ACSQNS
Trigger: GCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGC...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGTCCAGCGCGGCCCTCTaGCTGTGGGCCTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLSSAAL*LWACSQ
Trigger: CTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGA...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCCGCGGGCTGTGTCCTaGAGCTGCTCCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLPRAVS*SCSCRP
Trigger: GGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGG...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGGGTGCCAGGCCCATCTaGTCAGGCTCGGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMGARPI*SGSGPR
Trigger: CCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACC...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGGCTGTGCCGGTTCTTaGGCAGCCGCGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLGCAGS*AAAPTG
Trigger: GCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCC...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGGACCCTCCAGCACGCTaGCCTCGCGCCTGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMDPPAR*PRACEP
Trigger: AGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTC...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCATCCACACTGTGCTTGTaGCACCCAGGCTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPSTLCL*HPGSRA
Trigger: CGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGA...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAGCCCTCTCCAGGTCCTaGCTTGCCTTGTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPALSRS*LALSRS
Trigger: GGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGC...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACTGTCCTGGGCTTGCCTaGGGCGAGGCCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNCPGLA*GEARLL
Trigger: CAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACA...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTTCGGCCCGGGCCTGCTaGTCCGAGGCCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSSARAC*SEACSW
Trigger: CCAGGAGCAGGCCTCGGAGCAGCAGGCCCGGGCCGA...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGCGGCCCTCTGCCTGTaGGCCTGCTCCCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLAALCL*ACSQNS
Trigger: GCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGC...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAAGTAGCGCGGGCTCATaGCTGAAGAGGCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPSSAGS*LKRPSW
Trigger: CCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACT...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTTGCTGCAGGTGGCTGTaGTGCCGCAGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTCCRWL*CRRARP
Trigger: TGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCA...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGTAGCAGGCCAGGGCTaGCTGCTGGACGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLVAGQG*LLDGTV
Trigger: GACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTAC...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTGGTGCCAGGCCCATCTaGTCAGGCTCGGGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCGARPI*SGSGPR
Trigger: CCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACC...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCACACACGCCCCGGATCTaGCTCTCTGGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPHTPRI*LSGVSK
Trigger: CTTTGACACCCCAGAGAGCCAGATCCGGGGCGTGTG...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCAGCTGCTCCGACCTCTaGCTCCCGCGTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLSCSDL*LPRGRG
Trigger: ACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCATCTGCGAGCTGGAGGTaGGATGGCAAGGACCCTCTC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPSASWR*DGKDPL
Trigger: GAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGA...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGTCGGCCACACGGTCCTaGGGCACCAGCCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQSATRS*GTSRTS
Trigger: GGAGGTCCGGCTGGTGCCCCAGGACCGTGTGGCCGA...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAGCTCTCCAGAGACGCTaGGCGCCAGAGGTGACTTTT +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPALQRR*APEVTF
Trigger: AAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGC...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAGCGCGGGCTCATGACTaGAGAGGCCAAGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPARAHD*RGQAGI
Trigger: AATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGC...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACCTGGCCTGGGTTTGCTaGTCCGGCACGCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNLAWVC*SGTRLA
Trigger: AGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAG...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAGTAGCAGGCCAGGGCTaGCTGCTGGACGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGVAGQG*LLDGTV
Trigger: GACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTAC...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGACGCTCCCTTGCCAGCTaGTCCACCTGCCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGRSLAS*STCPCW
Trigger: CCAGCAAGGGCAGGTGGAGCAGCTGGCAAGGGAGCG...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCCGAGTCCAGGGAGCTaGCGTCTGCGCCCATCCGGG +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCPSPGS*RLRPSG
Trigger: CCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTCACACAGTGCCTGGGTaGAGCAGGGTGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTHTVPG*SRVPGP
Trigger: TGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTG...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCGGCCAGGCCACACAGTaGCTGGGTGCAGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTGQATQ*LGAAGC
Trigger: GCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCC...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACCAGGGCCTGCATCTCTaGTTCCAGGGAGGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNQGLHL*FQGGPV
Trigger: GACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTG...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCGCGGGGGCCGGGCTCTaGGTAGCTTCTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTAGAGL*VASVSW
Trigger: CCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGC...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTTCTCAGCCTGTCCCCTaGACGAAGCGGCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTSQPVP*TKRPAS
Trigger: TGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGA...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGAACCCTGCGGGTCTaGGAGCTGGAGGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTGTLRV*ELEVGW
Trigger: CCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCC...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCGCCAGGGCTGCCTGCTaGACGGCACTGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLARAAC*TALSTV
Trigger: GACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGC...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTGGCCGGCCTCAGGGGTaGCTCCCACATCCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCGRPQG*LPHPWL
Trigger: CAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCC...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAAGTGCTCTCACCAGGTaGGCGTTCTCCACGTACAGC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPSALTR*AFSTYS
Trigger: GCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACT...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACGCTGAGCGCCAGAGGTaGCTTTTCAGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNAERQR*LFRLAW
Trigger: CCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGC...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCGACCCTCCAGCACGCTaGCCTCGCGCCTGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCDPPAR*PRACEP
Trigger: AGGCTCGCAGGCGCGAGGTCAGCGTGCTGGAGGGTC...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTTGCCTCAGCCTCAGGTaGGCTCCCTGCACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTCLSLR*APCTWS
Trigger: AGACCAGGTGCAGGGAGCTCACCTGAGGCTGAGGCA...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGGCTCTCCCTGAAGGCTaGGCAGGCGATGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQALPEG*AGDAAR
Trigger: CCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGC...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCTCCAGCGCGGCCCTCTaGCTGTGGGCCTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCSSAAL*LWACSQ
Trigger: CTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGA...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGTCATCGTTGCGGTCCTaGAGGTCCCGGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLSSLRS*RSRHLS
Trigger: GCTCAAGTGCCGGGACCTGCAGGACCGCAACGATGA...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCCCGAGTCCAGGGAGCTaGCGTCTGCGCCCATCCGGG +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCPSPGS*RLRPSG
Trigger: CCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGG...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCCTGGGTGCAGCAGGGTaGCAGGCCCATCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTLGAAG*QAHLLR
Trigger: CCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAG...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTCACACAGTGCCTGGGTaGAGCAGGGTGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSHTVPG*SRVPGP
Trigger: TGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTG...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAGCGAGGCCCGGCTCCTaGCGCCTCCTCAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLARPGS*RLLRLS
Trigger: AGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGC...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAGCAGCAAGCTGCTCCTaGCAGGAACCCTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGAASCS*QEPCGS
Trigger: AGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGC...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACGGACCTCCTGCAAGTaGTGGGCCTGGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLRTSCK*WAWACL
Trigger: GAGGCAGGCCCAGGCCCAGCACTTGCAGGAGGTCCG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTGCTCCGGCACGCGTCTaGCTTCTGTGGCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSAPARV*LLWQRH
Trigger: GTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGC...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCCGGATCTGGCTCTCTaGGGTGTCAAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLPDLAL*GVKGGA
Trigger: AGCCCCTCCTTTGACACCCCAGAGAGCCAGATCCGG...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCTGGAGCCCGACGCTCTaGCAGACCACAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTWSPTL*QTTASS
Trigger: GGAGCTGGCTGTGGTCTGCCAGAGCGTCGGGCTCCA...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCGAGGTTGTGGTGGTGTaGCAGCCGCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLEVVVV*QPLSSG
Trigger: CCCAGAGGAGAGCGGCTGCCACACCACCACAACCTC...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGGGATGAGGTTGTGGTaGTGTGGCAGCCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLGMRLW*CGSRSP
Trigger: AGGAGAGCGGCTGCCACACCACCACAACCTCATCCC...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCAGAAGAGGCGCAGGCTaGAGCACAGGGACACGAGGG +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLRRGAG*STGTRG
Trigger: CCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCAAGGCCACACAGTGCCTaGGTGCAGCAGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSRPHSA*VQQGAR
Trigger: CCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCCT...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAGTAGCTTCTGTGTCCTaGGCTTGCCTGCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGVASVS*ACLRRG
Trigger: GCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTAC...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGATGCGGGTCTGCGAGCTaGAGGTGGGATGGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGCGSAS*RWDGKD
Trigger: GTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCA...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCGGTCTCCCCCTCTTCTaGGGCAGCAAGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLGLPLF*GSKLLL
Trigger: CAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACC...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCATCCTCGTTTTGGGCCTaGTGGGTAGAAGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPSSFWA*WVEASC
Trigger: ACAGGAGGCTTCTACCCACCAGGCCCAAAACGAGGA...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCACTTTCCTCAAGGGTCTaGGTCAGCTCTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPLSSRV*VSSDHG
Trigger: GCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAG...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCATCCAGGCGCCTCCTaGCCTGCTCTCCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQHPGAS*PALPEG
Trigger: GCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATG...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAGTAGCGCGGGCTCATaGCTGAAGAGGCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNSSAGS*LKRPSW
Trigger: CCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACT...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACCCATCCGGGCTCCATaGGGGGCTGTGCCGGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLPIRAP*GAVPVL
Trigger: AAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAAGAATTACCCAGGAATaGAATGCCTGCTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPRITQE*NACWAE
Trigger: CTCGGCCCAGCAGGCATTTCATTCCTGGGTAATTCT...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTTCCAGGTCGGCCTTCTaGCCCTCCAGCACGCTGACC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCSRSAF*PSSTLT
Trigger: GGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGA...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTCCCCAGATGACCTCCTaGGACTTCTCGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTPQMTS*DFSWSS
Trigger: GGAGCTCCACGAGAAGTCTCAGGAGGTCATCTGGGG...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCCTGCAGGCCCCAGATaGCCTCCTGAGACTTCTCGT +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLPAGPR*PPETSR
Trigger: ACGAGAAGTCTCAGGAGGTCATCTGGGGCCTGCAGG...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCCCTGCACCTGGTCTTaGCTTTCCTCAAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLPCTWS*LSSRVW
Trigger: CCAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGGG...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGTGCCTCAGCCTCAGGTaGGCTCCCTGCACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQCLSLR*APCTWS
Trigger: AGACCAGGTGCAGGGAGCTCACCTGAGGCTGAGGCA...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCTTCTCCTCGGTGGCCTaGAGTGCTCTCACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLFSSVA*SALTRW
Trigger: CCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAA...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTTTCCGAGAAGCGTCTaGAGGAGGACGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMFPRSV*RRTGSC
Trigger: GCAGCTGCCCGTCCTCCTGCAGACGCTTCTCGGAAA...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCACCACAGCCAGCTCCTaGTCGCTCAGGTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTTTASS*SLRCPL
Trigger: CAGCGGACACCTGAGCGAGCAGGAGCTGGCTGTGGT...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCACTGAAGTCCAGGCTCTaGAAGATCTCCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPLKSRL*KISLPF
Trigger: GAATGGCAGGGAGATCTTGCAGAGCCTGGACTTCAG...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACAGGCCAGGGCTGCCTaGTGGACGGCACTGTCCACT +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLQARAA*WTALST
Trigger: AGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGCCTG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACGCTCCCTTGCCAGCTaGTCCACCTGCCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLRSLAS*STCPCW
Trigger: CCAGCAAGGGCAGGTGGAGCAGCTGGCAAGGGAGCG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCTCCATGAGGGGCTGTaGCGGTTCTTGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCLHEGL*RFLGSR
Trigger: GCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATCGCGCCTGCGAGCCTaGTCCATGTCCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSSRLRA*SMSFLS
Trigger: GGAGAGGAAGGACATGGAGCAGGCTCGCAGGCGCGA...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCGTGGCAGGGGTCCCTaGGGCGGCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHRGRGP*GGSSSS
Trigger: GGAGCTGGAGGAGCCGCCGCAGGGACCCCTGCCACG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGATGGTCACTCTGCTGCTaGCCACTGCGAACCACCTCC +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGWSLCC*PLRTTS
Trigger: GGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCA...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGACTCGGTGGCCTGAAGTaGTCTCACCAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGLGGLK*SHQVGV
Trigger: AACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAG...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCGCGTCTGGCTTCTGTaGCAGCGTCACATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLRVWLL*QRHIAQ
Trigger: CTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCG...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTGCTCCGGCACGCGTCTaGCTTCTGTGGCAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCAPARV*LLWQRH
Trigger: GTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGC...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGCTTTTCAGGCTGGCCTaGGTTTGCTGCTCCGGCACG +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMLFRLA*VCCSGT
Trigger: CGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAG...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGGCTGCAGGACTTCTaGGGGCTCCCAAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTGLQDF*GLPKSS
Trigger: TGAGGACTTTGGGAGCCCCCAGAAGTCCTGCAGCCC...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCTCTTTCTCGAGTCCCTaGAGCCCGACGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLSFSSP*SPTLWQ
Trigger: CTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGA...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAGCGAACCGCTCCTCCTaGGCCAGGAGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLANRSS*ARSSAL
Trigger: GAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGC...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAGGCTGTGCCGGTTCTTaGGCAGCCGCGCCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLGCAGS*AAAPTG
Trigger: GCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCC...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTTGGCTCCCACATCCGTaGCTGGGTTTGCGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSWLPHP*LGLRGV
Trigger: GACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCA...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR TCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCGCAGGTCCCGGCACTTaGGCTCGTATTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLAGPGT*ARIPSG
Trigger: TCCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGC...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGGCAGGTCCCGGCACTTaGGCTCGTATTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMAGPGT*ARIPSG
Trigger: TCCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGC...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCCTGCAGGCCCCAGATaGCCTCCTGAGACTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQPAGPR*PPETSR
Trigger: ACGAGAAGTCTCAGGAGGTCATCTGGGGCCTGCAGG...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTATGCTGCAGGTGGCTGTaGTGCCGCAGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLCCRWL*CRRARP
Trigger: TGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCA...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACCTCAGCCTCTCTCCTaGTCTGCTGCAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSPQPLS*SAAGGC
Trigger: ACAGCCACCTGCAGCAGATCAGGAGAGAGGCTGAGG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR TCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCATCTGATTCTGTCTGTTaGGCACCTCCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPSDSVC*APPSQS
Trigger: GCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGA...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCTGGCCTGGGTTTGCTaGTCCGGCACGCGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSLAWVC*SGTRLA
Trigger: AGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTTGTCAAAGGAGGGGCTaGAGGACTTCTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSCQRRG*RTSGGS
Trigger: GGAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACA...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGGTGTCCGCTGCTaGCCACCCCCAGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSSGVRC*PPPALP
Trigger: GGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGA...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACTTGTCACGCTCCCTTaGCAGCTGCTCCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLLVTLP*QLLHLP
Trigger: GGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTGCCCTCTCCAGGTCCTaGCTTGCCTTGTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCALSRS*LALSRS
Trigger: GGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGC...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTTCTTCTCCGTGAGCTaGTCCAGGGTGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMFFSVS*SRVEWQ
Trigger: CTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAA...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGCCTTCCAGCTCAGCTTaGAGCTCATCGTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMPSSSA*SSSLRS
Trigger: GGACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGG...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCTCCATGAGGGGCTGTaGCGGTTCTTGGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSLHEGL*RFLGSR
Trigger: GCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCCGCGGGCTGTGTCCTaGAGCTGCTCCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHPRAVS*SCSCRP
Trigger: GGGCCTGCAGGAGCAGCTGCAGGACACAGCCCGCGG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCCTGCTCCAGCCCCGCTaGGCTCGCGCCGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSLLQPR*ARAERL
Trigger: GAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAG...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTTGGTCACTCTGCTGCTaGCCACTGCGAACCACCTCC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSWSLCC*PLRTTS
Trigger: GGAGGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCA...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCGGACCTCCTGCAAGTaGTGGGCCTGGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNRTSCK*WAWACL
Trigger: GAGGCAGGCCCAGGCCCAGCACTTGCAGGAGGTCCG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCATGTTCTTCCCGCTGTaGATCCAGGCGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTMFFPL*IQAPPG
Trigger: GCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACAT...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCATCCCATAGCAGGCTaGGAGGCGCCTCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNHPIAG*EAPPPS
Trigger: GGACGGCGGAGGCGCCTCCCAGCCTGCTATGGGATG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGAGCTGGGTCAGCTCCTaGCGGTCCAGAAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQSWVSS*RSRKPV
Trigger: GACTGGCTTTCTGGACCGCCAGGAGCTGACCCAGCT...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTAGCTTAAGGCAGAGCTaGGTCAGCTCCTGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSSLRQS*VSSWRS
Trigger: GGACCGCCAGGAGCTGACCCAGCTCTGCCTTAAGCT...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCACATACTTTGGAGGGATaGCACTGGAGGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPHTLEG*HWRQLI
Trigger: AATCAGCTGCCTCCAGTGCCATCCCTCCAAAGTATG...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTCTTTTCAGGCTGGCCTaGGTTTGCTGCTCCGGCACG +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSLFRLA*VCCSGT
Trigger: CGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAG...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGGGTGACTTTTCAGGCTaGCCTGGGTTTGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMGDFSG*PGFAAP
Trigger: CGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACC...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGGGGCTGCAGGACTTCTaGGGGCTCCCAAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQGLQDF*GLPKSS
Trigger: TGAGGACTTTGGGAGCCCCCAGAAGTCCTGCAGCCC...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACCGGATCTGGCTCTCTaGGGTGTCAAAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSPDLAL*GVKGGA
Trigger: AGCCCCTCCTTTGACACCCCAGAGAGCCAGATCCGG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATCTTTCTCGAGTCCCTaGAGCCCGACGCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSSFSSP*SPTLWQ
Trigger: CTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGA...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCAGCCGCTCTCCTCTaGGACCTGGTAATGAGACCA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTAAALL*DLVMRP
Trigger: TGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGC...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAGAGGTTGTGGTGGTGTaGCAGCCGCTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLEVVVV*QPLSSG
Trigger: CCCAGAGGAGAGCGGCTGCCACACCACCACAACCTC...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGAACGATACGCACATCTaGGCGCGCTTCTCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMNDTHI*ARFSLA
Trigger: TGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTT...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGTCCCACATCCGTGGCTaGGTTTGCGAGGCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQSHIRG*VCEASL
Trigger: GAGAGACGCCTCGCAAACCCAGCCACGGATGTGGGA...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATTCGGCCACACGGTCCTaGGGCACCAGCCGGACCTCC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHSATRS*GTSRTS
Trigger: GGAGGTCCGGCTGGTGCCCCAGGACCGTGTGGCCGA...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGTGCTGTAGACTTCCCTaGGCTGCGAGACATAGTGGT +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLCCRLP*AARHSG
Trigger: ACCACTATGTCTCGCAGCTCAGGGAAGTCTACAGCA...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCGCTGAGCGCCAGAGGTaGCTTTTCAGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCAERQR*LFRLAW
Trigger: CCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGC...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACCACATGGCCAGGACCTaGTCAGGAAAAGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNHMART*SGKAKP
Trigger: TGGCTTCGCTTTTCCTGATCAGGTCCTGGCCATGTG...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCATCTCCCTGCCATTCTaGATCCCCTCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LYRALTLHFTLTARVGSTISLPF*IPSWVH
Trigger: GTGGACCCAGGAGGGGATTCAGAATGGCAGGGAGAT...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCCCATCCGGGCTCCATaGGGGGCTGTGCCGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNPIRAP*GAVPVL
Trigger: AAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACCCCAGATGACCTCCTaGGACTTCTCGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLPQMTS*DFSWSS
Trigger: GGAGCTCCACGAGAAGTCTCAGGAGGTCATCTGGGG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAAGGCTGGCCTGGGTTTaGTGCTCCGGCACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLRLAWV*CSGTRL
Trigger: CAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCT...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAACCATCGTCAATaGTGGAGAAGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLQNHRQ*WRRGAG
Trigger: GCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTG...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCCTTGTCACGCTCCCTTaGCAGCTGCTCCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCLVTLP*QLLHLP
Trigger: GGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAG...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACCTTCCAGCTCAGCTTaGAGCTCATCGTTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSPSSSA*SSSLRS
Trigger: GGACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACAGGGAGCTGCCGTCTaGGCCCATCCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGQGAAV*AHPGSM
Trigger: CATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTG...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCAGGGAGCTGCCGTCTaGGCCCATCCGGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHQGAAV*AHPGSM
Trigger: CATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCTCCACAGGGCTGCATaGGTGACCACCTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCLHRAA*VTTSLR
Trigger: CCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGGAG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACATCCGTGGCTGGGTTTaGGAGGCGTCTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNIRGWV*EASLSV
Trigger: AACAGAGAGAGACGCCTCGCAAACCCAGCCACGGAT...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCTGCTGCTGCCCACTaGGAACCACCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSSAAAH*EPPPPG
Trigger: GCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGA...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCATTTGGTCACTCTGCTaGTGCCCACTGCGAACCACC +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLIWSLC*CPLRTT
Trigger: GGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAAT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAAGGCTGAGCAGGCGATaGAGCTCGGCCACACGGTCC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLRLSRR*SSATRS
Trigger: GGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCT...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCTCGGTGGCCTGAAGTaGTCTCACCAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCLGGLK*SHQVGV
Trigger: AACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACCCCCACCTCCATCTTaGCCAGGGCAGACCATTCAT +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSPPPPS*PGQTIH
Trigger: ATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGGGG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTCATCCCATAGCAGGCTaGGAGGCGCCTCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAHPIAG*EAPPPS
Trigger: GGACGGCGGAGGCGCCTCCCAGCCTGCTATGGGATG...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTGAAAGCCAGTCCCCGTaGTGTCGCAGCTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSESQSP*CRSCCR
Trigger: TCTACAGCAGCTGCGACACCACGGGGACTGGCTTTC...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACGAGGGATGAGGTTGTaGTGGTGTGGCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLRGMRL*WCGSRS
Trigger: AGAGCGGCTGCCACACCACCACAACCTCATCCCTCG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCAGAAGAGGCGCAGGCTaGAGCACAGGGACACGAGGG +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSRRGAG*STGTRG
Trigger: CCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCT...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCAACCATCGTCAATGCTaGAGAAGAGGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLNHRQC*RRGAGW
Trigger: CCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAGCCAGGGCTGCCTGCTaGACGGCACTGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLARAAC*TALSTV
Trigger: GACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGC...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTTGCTCCAGGGTGGAGTaGCAGTCGTCCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTCSRVE*QSSISF
Trigger: GAAAGAGATGGACGACTGCCACTCCACCCTGGAGCA...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAGGCCACACAGTGCCTaGGTGCAGCAGGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNRPHSA*VQQGAR
Trigger: CCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCCT...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCGATGCTCCTCGTTTTaGGCCTGGTGGGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQRCSSF*AWWVEA
Trigger: GGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCG...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTAGTGCTCTCACCAGGTaGGCGTTCTCCACGTACAGC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSSALTR*AFSTYS
Trigger: GCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACT...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAGTCGGAAGCACCACATaGAAAGTGCTGTCCATAACT +
Preference number: 4 (lower is better)
Translates to: TPASATCIFPQPPPPSCPVGSTT*KVLSIT
Trigger: AGTTATGGACAGCACTTTCCATGTGGTGCTTCCGAC...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCCCCTCCTTTCTCGCTaGGTTGACGTTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCPLLSR*VDVPSE
Trigger: CTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCGGCACTGGAGGCAGCTaGTTCCAAAGAACTACTGTC +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLGTGGS*FQRTTV
Trigger: GACAGTAGTTCTTTGGAATCAGCTGCCTCCAGTGCC...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTGCTCTCCAGAGACGCTaGGCGCCAGAGGTGACTTTT +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCALQRR*APEVTF
Trigger: AAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGC...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACACTGTCCACTGTCATaGGCTCGTTGTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLHCPLS*ARCQGP
Trigger: GGGCCCTTGACAACGAGCTCATGACAGTGGACAGTG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATTCCAGGTCGGCCTTCTaGCCCTCCAGCACGCTGACC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHSRSAF*PSSTLT
Trigger: GGTCAGCGTGCTGGAGGGTCAGAAGGCCGACCTGGA...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCAGCCTCCTGTCCCAGTTaGAGAACCCTGACATTGAGC +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSASCPS*RTLTLS
Trigger: GCTCAATGTCAGGGTTCTTCAACTGGGACAGGAGGC...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAGACGTTCCCAGCGAGTaGAGCCTTTTCTGGAATGTG +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGDVPSE*SLFWNV
Trigger: CACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTC...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACGACGTTCCCAGCGAGTaGAGCCTTTTCTGGAATGTG +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNDVPSE*SLFWNV
Trigger: CACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTC...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCAGGTGTCCGCTGCTaGCCACCCCCAGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPASGVRC*PPPALP
Trigger: GGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGA...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATACCACAGCCAGCTCCTaGTCGCTCAGGTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNTTASS*SLRCPL
Trigger: CAGCGGACACCTGAGCGAGCAGGAGCTGGCTGTGGT...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACAGAACCATCGTCAATaGTGGAGAAGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSQNHRQ*WRRGAG
Trigger: GCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACAGGCCAGGGCTGCCTaGTGGACGGCACTGTCCACT +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGQARAA*WTALST
Trigger: AGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGCCTG...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTTCCTTCAGGACTGCTaGGAACCGCTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSFLQDC*EPLLLG
Trigger: GCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAA...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCAGTATTCCTTCAGGACTaGTGCGAACCGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSVFLQD*CEPLLL
Trigger: CAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATAC...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTACTTGCAGCTCATCGTTaGGGTCCTGCAGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLLAAHR*GPAGPG
Trigger: GCCGGGACCTGCAGGACCGCAACGATGAGCTGCAAG...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGTACCCAGGAATGAAATaGCTGCTGGGCCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQYPGMK*LLGRVQ
Trigger: CTGGACTCGGCCCAGCAGGCATTTCATTCCTGGGTA...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCTGGGTGCAGCAGGGTaGCAGGCCCATCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHLGAAG*QAHLLR
Trigger: CCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTGCTCCTGGGTGCCCCTaGTCCAGCTTCGTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAAPGCP*SSFVLA
Trigger: AGCGAGCACGAAGCTGGAGCAGGGGCACCCAGGAGC...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCATGTTCTTCCCGCTGTaGATCCAGGCGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSMFFPL*IQAPPG
Trigger: GCCAGGAGGCGCCTGGATGCACAGCGGGAAGAACAT...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCCGGCTTCTGCAACATaGATATTCCCCCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCPASAT*IFPQPP
Trigger: TGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGAACTGCTCACTTACCTaGTCCTTGCTGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMNCSLT*SLLTAP
Trigger: GGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTT...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTAACTGCTCACTTACCTaGTCCTTGCTGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTNCSLT*SLLTAP
Trigger: GGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTT...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCAGCTTAAGGCAGAGCTaGGTCAGCTCCTGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSSLRQS*VSSWRS
Trigger: GGACCGCCAGGAGCTGACCCAGCTCTGCCTTAAGCT...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTCCTCTTCATCTGACTTaGGACTCTCCACGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTPLHLT*DSPRSP
Trigger: TGGAGAGCGTGGAGAGTCCCAAGTCAGATGAAGAGG...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGATGGAGCCCGACGCTCTaGCAGACCACAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGWSPTL*QTTASS
Trigger: GGAGCTGGCTGTGGTCTGCCAGAGCGTCGGGCTCCA...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCGAGGGATGAGGTTGTaGTGGTGTGGCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSRGMRL*WCGSRS
Trigger: AGAGCGGCTGCCACACCACCACAACCTCATCCCTCG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCGCGAACCGCTCCTCCTaGGCCAGGAGCTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSANRSS*ARSSAL
Trigger: GAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGC...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCACCTCCATCTTGCCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAGGCTCTGGCTCCTTTaGGACAATATCCCCATCCAC +
Preference number: 4 (lower is better)
Translates to: PTSILPRADHSLTICGVNRLWLL*DNIPIH
Trigger: GTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCT...GTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTCTTTCCTCAAGGGTCTaGGTCAGCTCTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSLSSRV*VSSDHG
Trigger: GCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAG...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAACAGCTCCCAGGATCTaGCTCCAGAGAGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGTAPRI*LQRVAK
Trigger: TTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGT...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGACAGCTCCCAGGATCTaGCTCCAGAGAGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMTAPRI*LQRVAK
Trigger: TTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGT...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACACATGGCCAGGACCTaGTCAGGAAAAGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLHMART*SGKAKP
Trigger: TGGCTTCGCTTTTCCTGATCAGGTCCTGGCCATGTG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCCTTCTCGTCCACGCTaGAGTCCAGGCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSPSRPR*SPGSAR
Trigger: TCTTGCAGAGCCTGGACTTCAGCGTGGACGAGAAGG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGATCTGATTCTGTCTGTTaGGCACCTCCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGSDSVC*APPSQS
Trigger: GCTCTGAGATGGAGGTGCTCAACAGACAGAATCAGA...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGACTTTACATTTCACTCTaGCAGCCAGGGTCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGLYISL*QPGSEA
Trigger: TGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAG...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTCTGCAAGATCTCCCTaGCATTCTGAATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMSARSP*HSESPP
Trigger: AGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGA...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTTCTTCTCCGTGAGCTaGTCCAGGGTGGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSFFSVS*SRVEWQ
Trigger: CTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAA...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGTACCCCTGCTCCAGATaGTTGATTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLYPCSR*LIFFSV
Trigger: CACGGAGAAGAAAATCAAGCATCTGGAGCAGGGGTA...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTATTCCTTCAGGACTGCTaGGAACCGCTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLFLQDC*EPLLLG
Trigger: GCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAA...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATCCAAGGTCAGGTCTCTaGGAGCGGGCAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANPRSGL*ERAGLP
Trigger: TGGGAGCCCTGCCCGCTCGCAGAGACCTGACCTTGG...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATTCCTGCCAGGAACCCTaGGGGTCTGCGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANSCQEP*GSASWR
Trigger: CCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGA...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCTCTGGGGCAGCAAGCTaGTCCTGCCAGGAACCCTGC +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSSGAAS*SCQEPC
Trigger: GCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGA...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCTGCTGCCCACTaGGAACCACCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPASAAAH*EPPPPG
Trigger: GCCTGGAGGAGGTGGTTCGCAGTGGGCAGCAGCAGA...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAGGCTGAGCAGGCGATaGAGCTCGGCCACACGGTCC +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANRLSRR*SSATRS
Trigger: GGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCT...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGAAAAACGCCGGCTTCTaGAACATGCATATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLKNAGF*NMHIPP
Trigger: TGGGGGAATATGCATGTTGCAGAAGCCGGCGTTTTT...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAACCATTCACATACTTTaGAGGGATGGCACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGTIHIL*RDGTGG
Trigger: GCCTCCAGTGCCATCCCTCCAAAGTATGTGAATGGT...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCGCAGCCGCTCTCCTCTaGGACCTGGTAATGAGACCA +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSAAALL*DLVMRP
Trigger: TGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGC...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTACGCGCCGAAAGGCTCTaGCTCCTTTGGGACAATATC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLRAERL*LLWDNI
Trigger: GATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCG...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATGAGCTGGAGGTGGGATaGCAAGGACCCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHELEVG*QGPSPG
Trigger: GCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTC...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATCATCCAGGCGCCTCCTaGCCTGCTCTCCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANHPGAS*PALPEG
Trigger: GCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATG...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTATGCTGTAGACTTCCCTaGGCTGCGAGACATAGTGGT +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLCCRLP*AARHSG
Trigger: ACCACTATGTCTCGCAGCTCAGGGAAGTCTACAGCA...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGCGAACACCAGCATTTaGAGACAACACAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTANTSI*RQHSHK
Trigger: TTTGTGGCTGTGTTGTCTTCAAATGCTGGTGTTCGC...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGACTACTGTCTTCATCTaGGGGGCGAACACCAGCATT +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQTTVFI*GANTSI
Trigger: AATGCTGGTGTTCGCCCCTCAGATGAAGACAGTAGT...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCCTTCTCGTCCACGCTaGAGTCCAGGCTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNPSRPR*SPGSAR
Trigger: TCTTGCAGAGCCTGGACTTCAGCGTGGACGAGAAGG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTACCCTGCACCTGGTCTTaGCTTTCCTCAAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLPCTWS*LSSRVW
Trigger: CCAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGGG...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCTTCTCCTCGGTGGCCTaGAGTGCTCTCACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSFSSVA*SALTRW
Trigger: CCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAA...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTCCTCAAGACTCACTTTaGCGTCTCCGTCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSPQDSL*RLRLDP
Trigger: TGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGG...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCTGAAGTCCAGGCTCTaGAAGATCTCCCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCLKSRL*KISLPF
Trigger: GAATGGCAGGGAGATCTTGCAGAGCCTGGACTTCAG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCCTGCTCCAGCTTCGTaGTCGCTCTTCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNPAPAS*SLFLNG
Trigger: GCCATTCAGGAAGAGCGAGCACGAAGCTGGAGCAGG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATCGTGAGTACTTTCTaGAGCTTCAAGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGIVSTF*SFKLLP
Trigger: CGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGAT...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATTTGGTCACTCTGCTaGTGCCCACTGCGAACCACC +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCIWSLC*CPLRTT
Trigger: GGTGGTTCGCAGTGGGCAGCAGCAGAGTGACCAAAT...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCAAAAACGCCGGCTTCTaGAACATGCATATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLKNAGF*NMHIPP
Trigger: TGGGGGAATATGCATGTTGCAGAAGCCGGCGTTTTT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGAGTGCTGTCCATAACTaGTCACTTACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMSAVHN*SLTCSL
Trigger: CAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACT...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGTTAACCCTGGCGAAATaGTCGTTTCCGAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQLTLAK*SFPRSV
Trigger: GACGCTTCTCGGAAACGACCATTTCGCCAGGGTTAA...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTCATACTTTGGAGGGATaGCACTGGAGGCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSHTLEG*HWRQLI
Trigger: AATCAGCTGCCTCCAGTGCCATCCCTCCAAAGTATG...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCGCGTCTGGCTTCTGTaGCAGCGTCACATAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNRVWLL*QRHIAQ
Trigger: CTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCACACGCCCCGGATCTaGCTCTCTGGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHHTPRI*LSGVSK
Trigger: CTTTGACACCCCAGAGAGCCAGATCCGGGGCGTGTG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCTGAAGAGGCCAAGCTaGAATTCCTCAAGACTCACT +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLLKRPS*NSSRLT
Trigger: AGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAG...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCTCGCTCTTCCTGAATaGCCTGTAGCCTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSLALPE*PVASQP
Trigger: AGGCTGAGAGGCTACAGGCCATTCAGGAAGAGCGAG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCTCTCCAGCGCTATTTTaGTCTCCCCCTCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCSPALF*SPPLLG
Trigger: CCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGA...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTCTGGCTCCAGAGAGTaGCAAAACTGGGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMSGSRE*QNWEFC
Trigger: GCAAAATTCCCAGTTTTGCCACTCTCTGGAGCCAGA...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGGTCGGAAGCACCACATaGAAAGTGCTGTCCATAACT +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMVGSTT*KVLSIT
Trigger: AGTTATGGACAGCACTTTCCATGTGGTGCTTCCGAC...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACCCCTCCTTTCTCGCTaGGTTGACGTTCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGPLLSR*VDVPSE
Trigger: CTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGG...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCGGCACTGGAGGCAGCTaGTTCCAAAGAACTACTGTC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSGTGGS*FQRTTV
Trigger: GACAGTAGTTCTTTGGAATCAGCTGCCTCCAGTGCC...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATATCTCCCTGCCATTCTaGATCCCCTCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHISLPF*IPSWVH
Trigger: GTGGACCCAGGAGGGGATTCAGAATGGCAGGGAGAT...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCCACTGTCCACTGTCATaGGCTCGTTGTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSHCPLS*ARCQGP
Trigger: GGGCCCTTGACAACGAGCTCATGACAGTGGACAGTG...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTCGTGCTCGCTCTTCCTaGATGGCCTGTAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPARARSS*MACSLS
Trigger: TGAGAGGCTACAGGCCATTCAGGAAGAGCGAGCACG...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR TCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCAGGACTCATGGCTCATaGCCCACGGAATCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSRTHGS*PTESKA
Trigger: TGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCT...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACCTTTCTCGCTGGGTTaGCGTTCCCAGCGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGPFSLG*RSQRVK
Trigger: CTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGG...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATTTTCCGAGAAGCGTCTaGAGGAGGACGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANFPRSV*RRTGSC
Trigger: GCAGCTGCCCGTCCTCCTGCAGACGCTTCTCGGAAA...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCTTTCCCGGTACCCCTaGTCCAGATGCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCLSRYP*SRCLIF
Trigger: GAAAATCAAGCATCTGGAGCAGGGGTACCGGGAAAG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAGTATTCCTTCAGGACTaGTGCGAACCGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLVFLQD*CEPLLL
Trigger: CAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATAC...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTCTGTGTCCTGGGCTTaGCTGCGGCGAGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRASVSWA*LRRGPA
Trigger: AGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATTCCACTCCACAGGGCTaGATGCGTGACCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHSTPQG*MRDHLS
Trigger: AGAGAGGTGGTCACGCATGCAGCCCTGTGGAGTGGA...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATGCAGCTTCAAGCTCTTaGCGAACCCTTCCCAGATCG +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNAASSS*RTLPRS
Trigger: CGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGC...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTATCGTGAGTACTTTCTaGAGCTTCAAGCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSIVSTF*SFKLLP
Trigger: CGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGAT...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACCCCCACCTCCATCTTaGCCAGGGCAGACCATTCAT +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGPPPPS*PGQTIH
Trigger: ATGAATGGTCTGCCCTGGGCAAGATGGAGGTGGGGG...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATGAAAGCCAGTCCCCGTaGTGTCGCAGCTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHESQSP*CRSCCR
Trigger: TCTACAGCAGCTGCGACACCACGGGGACTGGCTTTC...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTACCATTCACATACTTTaGAGGGATGGCACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCTIHIL*RDGTGG
Trigger: GCCTCCAGTGCCATCCCTCCAAAGTATGTGAATGGT...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATGGTGACTTTTCAGGCTaGCCTGGGTTTGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHGDFSG*PGFAAP
Trigger: CGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACC...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTCTGAAGAGGCCAAGCTaGAATTCCTCAAGACTCACT +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSLKRPS*NSSRLT
Trigger: AGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAG...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATGGGATGAGGTTGTGGTaGTGTGGCAGCCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANGMRLW*CGSRSP
Trigger: AGGAGAGCGGCTGCCACACCACCACAACCTCATCCC...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATGCTGCTTCTCCTCGGTaGCCTGAAGTGCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHAASPR*PEVLSP
Trigger: TGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGC...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGAGCTGCTTCTCCTCGGTaGCCTGAAGTGCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGAASPR*PEVLSP
Trigger: TGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGC...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATGTCCCAGGACTCATaGCTCATGACCCACGGAATC +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCMSQDS*LMTHGI
Trigger: GATTCCGTGGGTCATGAGCCATGAGTCCTGGGACAT...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTCCAGCTGGGTCCTaGGGTCTTGGTAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPASPAGS*GLGNAP
Trigger: AGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGA...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCCTTTACATTTCACTCTaGCAGCCAGGGTCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCLYISL*QPGSEA
Trigger: TGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAG...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATCCTTTCTCGCTGGGTTaGCGTTCCCAGCGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANPFSLG*RSQRVK
Trigger: CTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGG...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGATACCCAGGAATGAAATaGCTGCTGGGCCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGYPGMK*LLGRVQ
Trigger: CTGGACTCGGCCCAGCAGGCATTTCATTCCTGGGTA...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGAAAGTTCCTTTTCAGTaGCGCAATTTCCCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLKVPFQ*RNFPFV
Trigger: TACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTT...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCGCAGCTTCAAGCTCTTaGCGAACCCTTCCCAGATCG +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSAASSS*RTLPRS
Trigger: CGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGC...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTAATTTCCTTCCTCTGTaGATCGTGAGTACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: YLLLADSSQDLAPESGKTNFLPL*IVSTFC
Trigger: GCAGAAAGTACTCACGATGCACAGAGGAAGGAAATT...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCTTAACCCTGGCGAAATaGTCGTTTCCGAGAAGCGTC +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCLTLAK*SFPRSV
Trigger: GACGCTTCTCGGAAACGACCATTTCGCCAGGGTTAA...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATAACCATCGTCAATGCTaGAGAAGAGGCGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHNHRQC*RRGAGW
Trigger: CCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTT...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCTGCTCCAGGGTGGAGTaGCAGTCGTCCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSCSRVE*QSSISF
Trigger: GAAAGAGATGGACGACTGCCACTCCACCCTGGAGCA...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCGTTTCTATACTCACTaGAGCAGAATTACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLRFYTH*SRITQE
Trigger: TTCCTGGGTAATTCTGCTCCAGTGAGTATAGAAACG...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCCACGTGTGCCCTCCTaGCCACTTCCTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAPRVPS*PLPATS
Trigger: GCTGGTGGCAGGAAGTGGCCAGGAGGGCACACGTGG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCTCTCTGCCATCACCTaGGGCCAGCCAGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRALSAIT*GQPGQW
Trigger: CCACTGGCCTGGCTGGCCCCAGGTGATGGCAGAGAG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTCCGAGGCCTGCTCCTaGGTGCCCCTGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRASEACS*VPLLQL
Trigger: AAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATGCAAGGACCCTCTCCTaGCAACCTCCACACTGTGCT +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANARTLS*QPPHCA
Trigger: AGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGC...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTGTGTTAACATCTGAATaGTCACACGATGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSVLTSE*SHDAPR
Trigger: ACGAGGAGCATCGTGTGACCATTCAGATGTTAACAC...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCAGAGAGTGGCAAAACTaGGAATTTTGCCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLREWQN*EFCQGK
Trigger: TTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTAGAATTACCCAGGAATaGAATGCCTGCTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPARITQE*NACWAE
Trigger: CTCGGCCCAGCAGGCATTTCATTCCTGGGTAATTCT...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCTCTGTGTTAACATCTaGATGGTCACACGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSLCVNI*MVTRCS
Trigger: GGAGCATCGTGTGACCATTCAGATGTTAACACAGAG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGATATGGAACTCCAGTCTaGTCTGCTGCAGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGYGTPV*SAAGGC
Trigger: ACAGCCACCTGCAGCAGATCAGACTGGAGTTCCATA...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422516.5
CDS-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATTCTGCAAGATCTCCCTaGCATTCTGAATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNSARSP*HSESPP
Trigger: AGGAGGGGATTCAGAATGGCAGGGAGATCTTGCAGA...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCTTGCAGCTCATCGTTaGGGTCCTGCAGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRALAAHR*GPAGPG
Trigger: GCCGGGACCTGCAGGACCGCAACGATGAGCTGCAAG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAAAAGTTCCTTTTCAGTaGCGCAATTTCCCTTTCGTA +
Preference number: 4 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGKVPFQ*RNFPFV
Trigger: TACGAAAGGGAAATTGCGGCACTGAAAAGGAACTTT...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTCGCGCCTGCGAGCCTaGTCCATGTCCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRASRLRA*SMSFLS
Trigger: GGAGAGGAAGGACATGGAGCAGGCTCGCAGGCGCGA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGCATTCATTAACTATCTaGGGGGTGAACAAAGAATCC +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMHSLTI*GVNKES
Trigger: GGATTCTTTGTTCACCCCGCAGATAGTTAATGAATG...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCCCTCTTCATCTGACTTaGGACTCTCCACGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSPLHLT*DSPRSP
Trigger: TGGAGAGCGTGGAGAGTCCCAAGTCAGATGAAGAGG...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCAAGAGAGTGGCAAAACTaGGAATTTTGCCAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSREWQN*EFCQGK
Trigger: TTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTCAAATAATTCATTCTaGGCTTCTTTAGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMSNNSF*ASLVLS
Trigger: CGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGA...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTACTCTGTGTTAACATCTaGATGGTCACACGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLLCVNI*MVTRCS
Trigger: GGAGCATCGTGTGACCATTCAGATGTTAACACAGAG...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCAGAATCCCAGGTCTaGAGCTGTCCTTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPASESQV*SCPCAS
Trigger: TGAAGCACAAGGACAGCTGCAGACCTGGGATTCTGA...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATTCAGAATCCCAGGTCTaGAGCTGTCCTTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHSESQV*SCPCAS
Trigger: TGAAGCACAAGGACAGCTGCAGACCTGGGATTCTGA...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTGTCAAAGGAGGGGCTaGAGGACTTCTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRACQRRG*RTSGGS
Trigger: GGAGCCCCCAGAAGTCCTGCAGCCCCTCCTTTGACA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTCCTCAAGACTCACTTTaGCGTCTCCGTCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAPQDSL*RLRLDP
Trigger: TGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGG...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCTTTCCCGGTACCCCTaGTCCAGATGCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHLSRYP*SRCLIF
Trigger: GAAAATCAAGCATCTGGAGCAGGGGTACCGGGAAAG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTCATCGTTGCGGTCCTaGAGGTCCCGGCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRASSLRS*RSRHLS
Trigger: GCTCAAGTGCCGGGACCTGCAGGACCGCAACGATGA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAATTTCCTTCCTCTGTaGATCGTGAGTACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLNFLPL*IVSTFC
Trigger: GCAGAAAGTACTCACGATGCACAGAGGAAGGAAATT...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCATTCATTAACTATCTaGGGGGTGAACAAAGAATCC +
Preference number: 4 (lower is better)
Translates to: QSSDVPGLMAHDPRNLRQHSLTI*GVNKES
Trigger: GGATTCTTTGTTCACCCCGCAGATAGTTAATGAATG...CTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAGTGCTGTCCATAACTaGTCACTTACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNSAVHN*SLTCSL
Trigger: CAAGGAGCAGGTAAGTGAGCAGTTATGGACAGCACT...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCAGCAGAACAGTGAAATaGCAAAACTGTACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCSRTVK*QNCTEP
Trigger: GGGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCT...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTTCAAATAATTCATTCTaGGCTTCTTTAGTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSSNNSF*ASLVLS
Trigger: CGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGA...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCTTGCCGTCTCCGTCTTaGTCCAGTTTGTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSLPSPS*SSLLNR
Trigger: CCTGTTTAACAAACTGGATCAAGACGGAGACGGCAA...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCGCGCGGGCTCATGACTaGAGAGGCCAAGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAARAHD*RGQAGI
Trigger: AATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGC...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCCGGCTTCTGCAACATaGATATTCCCCCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAPASAT*IFPQPP
Trigger: TGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCTCTTCAGAAAGTCTATaGAACTCCAGTCTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCSSESL*NSSLSF
Trigger: GAACGACAGACTGGAGTTCCATAGACTTTCTGAAGA...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCGATGCTCCTCGTTTTaGGCCTGGTGGGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRARCSSF*AWWVEA
Trigger: GGCTTCTACCCACCAGGCCCAAAACGAGGAGCATCG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGATCTGGCTCCAGAGAGTaGCAAAACTGGGAATTTTGC +
Preference number: 4 (lower is better)
Translates to: SLTICGVNKESQSSDVPGSGSRE*QNWEFC
Trigger: GCAAAATTCCCAGTTTTGCCACTCTCTGGAGCCAGA...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAAGCAGAACAGTGAAATaGCAAAACTGTACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLSRTVK*QNCTEP
Trigger: GGGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCT...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCGCCTCCTGTCCCAGTTaGAGAACCCTGACATTGAGC +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAASCPS*RTLTLS
Trigger: GCTCAATGTCAGGGTTCTTCAACTGGGACAGGAGGC...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCTTAAAGCAGAACAGTaGAATGGCAAAACTGTACAG +
Preference number: 4 (lower is better)
Translates to: PRADHSLTICGVNKESQSLKAEQ*NGKTVQ
Trigger: CTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCCAAAACTGGGAATTTTaGCAAGGGAAATTACTCAGG +
Preference number: 4 (lower is better)
Translates to: AKGNYSGPLIKTPASATCQNWEF*QGKLLR
Trigger: CCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTG...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CCAGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTATCTTCAGAAAGTCTATaGAACTCCAGTCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: PESGKTGNFAKGNYSGPLSSESL*NSSLIC
Trigger: GCAGATCAGACTGGAGTTCCATAGACTTTCTGAAGA...TAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422516.5
CDS-3UTR TCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCAGGACTCATGGCTCATaGCCCACGGAATCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRARTHGS*PTESKA
Trigger: TGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCT...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCGTTTCTATACTCACTaGAGCAGAATTACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHRFYTH*SRITQE
Trigger: TTCCTGGGTAATTCTGCTCCAGTGAGTATAGAAACG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATGTGTTAACATCTGAATaGTCACACGATGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANVLTSE*SHDAPR
Trigger: ACGAGGAGCATCGTGTGACCATTCAGATGTTAACAC...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR TCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCGCGAACACCAGCATTTaGAGACAACACAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAANTSI*RQHSHK
Trigger: TTTGTGGCTGTGTTGTCTTCAAATGCTGGTGTTCGC...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTACCCCTGCTCCAGATaGTTGATTTTCTTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRAYPCSR*LIFFSV
Trigger: CACGGAGAAGAAAATCAAGCATCTGGAGCAGGGGTA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR GCA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATCAAAACTGGGAATTTTaGCAAGGGAAATTACTCAGG +
Preference number: 4 (lower is better)
Translates to: REWQNWEFCQGKLLRTANQNWEF*QGKLLR
Trigger: CCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTG...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 90 bp GCAGGTGGCTGTGATGCCGCAGGGCCAGGCCACACAGTGCCTGGGTaGAGCAGGGTGCCAGGCCCATCTGCTCAGGCTCGGGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: AGGCDAAGPGHTVPG*SRVPGPSAQARGRG
Trigger: CCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000336104.5
ENST00000422516.5
CDS CCA 90 bp GCAGGCCTTGGGTCAGCCCCCTCCCAGGGACGGGCTCCTACCTGCTaGGCCGAGTCCAGGGAGCTGCCGTCTGCGCCCATCCGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: AGLGSAPSQGRAPTC*AESRELPSAPIRAP
Trigger: TGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGTAGGAGCCCGTCCCTGGGAGGGGGCTGACCCAAGGCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489780.5
CDS TCA 90 bp TGGGCCGAGTCCAGGGAGCTGCCGTCTGCGCCCATCCGGGCTCCATaGGGGGCTGTGCCGGTTCTTGGGCAGCCGCGCCCACAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: WAESRELPSAPIRAP*GAVPVLGQPRPQAF
Trigger: GAAGGCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000489780.5
CDS GCA 90 bp AGGCGCCCCACGTCCCACTCCAGCGCGGCCCTCTGCCTGTGGGCCTaGTCCCAGAACAGCTCTCGCTCCGCCTCCACCTCAGACCGCAGG +
Preference number: 5 (lower is better)
Translates to: RRPTSHSSAALCLWA*SQNSSRSASTSDRR
Trigger: CCTGCGGTCTGAGGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000489780.5
CDS GCA 90 bp TTCAGGGCCAGGGTCAGCTTCTCGCGGAGGCCAGCCTCCTCAGCCTaGAGGCGCCCCACGTCCCACTCCAGCGCGGCCCTCTGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: FRARVSFSRRPASSA*RRPTSHSSAALCLW
Trigger: CCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGCGCCTGCAGGCTGAGGAGGCTGGCCTCCGCGAGAAGCTGACCCTGGCCCTGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000489780.5
CDS GCA 90 bp AGCTCCAGCTGCTCCGACCTCTGGCTCCCGCGTGGCAGGGGTCCCTaGGGCGGCTCCTCCAGCTCCAAGGTCAGGTCTCTGCGAGCGGGC +
Preference number: 5 (lower is better)
Translates to: SSSCSDLWLPRGRGP*GGSSSSKVRSLRAG
Trigger: GCCCGCTCGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 90 bp ACAGCAGGCCTTGGGTCAGCCCCCTCCCAGGGACGGGCTCCTACCTaGTGGGCCGAGTCCAGGGAGCTGCCGTCTGCGCCCATCCGGGCT +
Preference number: 5 (lower is better)
Translates to: TAGLGSAPSQGRAPT*WAESRELPSAPIRA
Trigger: AGCCCGGATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGTAGGAGCCCGTCCCTGGGAGGGGGCTGACCCAAGGCCTGCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489780.5
CDS TCA 90 bp CCCGCTGTGCATCCAGGCGCCTCCTGGCCTGCTCTCCCTGAAGGCTaGGCAGGCGATGCAGCTCGGCCACACGGTCCTGGGGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: PAVHPGASWPALPEG*AGDAARPHGPGAPA
Trigger: GGCTGGTGCCCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATGCACAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
ENST00000496509.2
CDS GCA 90 bp CCAGGGAGCTGCCGTCTGCGCCCATCCGGGCTCCATGAGGGGCTGTaGCGGTTCTTGGGCAGCCGCGCCCACAGGCCTTCCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PGSCRLRPSGLHEGL*RFLGSRAHRPSSSA
Trigger: AGCTGAGCTGGAAGGCCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCCCTCATGGAGCCCGGATGGGCGCAGACGGCAGCTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000489780.5
CDS GCA 90 bp GCAGGGGTCCCTGCGGCGGCTCCTCCAGCTCCAAGGTCAGGTCTCTaGGAGCGGGCAGGGCTCCCAGCCCCGACAGCTCTCCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: AGVPAAAPPAPRSGL*ERAGLPAPTALHSA
Trigger: AGCTGAGTGGAGAGCTGTCGGGGCTGGGAGCCCTGCCCGCTCGCAGAGACCTGACCTTGGAGCTGGAGGAGCCGCCGCAGGGACCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 90 bp CGTAGCTTCTGTGTCCTGGGCTTGCCTGCGGCGAGGCCCGGCTCCTaGCGCCTCCTCAGACTCTCTGCCATCACCTGGGGCCAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RSFCVLGLPAARPGS*RLLRLSAITWGQPG
Trigger: GCCTGGCTGGCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 90 bp CGCTCTGGCAGACCACAGCCAGCTCCTGCTCGCTCAGGTGTCCGCTaGTGCCCACCCCCAGCTCTTCCCACACGCCCCGGATCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RSGRPQPAPARSGVR*CPPPALPTRPGSGS
Trigger: AGAGCCAGATCCGGGGCGTGTGGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCTGTGGTCTGCCAGAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp CTGCACGAAGCGGCCGGCCTCAGGGGTGGCTCCCACATCCGTGGCTaGGTTTGCGAGGCGTCTCTCTCTGTTCCCAGCAGAGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LHEAAGLRGGSHIRG*VCEASLSVPSRGSS
Trigger: GGAGCTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 90 bp TCCCCTGCACGAAGCGGCCGGCCTCAGGGGTGGCTCCCACATCCGTaGCTGGGTTTGCGAGGCGTCTCTCTCTGTTCCCAGCAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPARSGRPQGWLPHP*LGLRGVSLCSQQRQ
Trigger: CTGCCTCTGCTGGGAACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 90 bp GTGCTCGCTCTTCCTGAATGGCCTGTAGCCTCTCAGCCTGTCCCCTaGACGAAGCGGCCGGCCTCAGGGGTGGCTCCCACATCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: VLALPEWPVASQPVP*TKRPASGVAPTSVA
Trigger: AGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCAGGAAGAGCGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 90 bp CCTGCGGGTCTGCGAGCTGGAGGTGGGATGGCAAGGACCCTCTCCTaGCAACCTCCACACTGTGCTTGTGACACCCAGGCTCCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: PAGLRAGGGMARTLS*QPPHCACDTQAPGR
Trigger: GCGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 90 bp GGGGCAGCAAGCTGCTCCTGCCAGGAACCCTGCGGGTCTGCGAGCTaGAGGTGGGATGGCAAGGACCCTCTCCTGGCAACCTCCACACTG +
Preference number: 5 (lower is better)
Translates to: GAASCSCQEPCGSAS*RWDGKDPLLATSTL
Trigger: CAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 90 bp CTCTTCTGGGGCAGCAAGCTGCTCCTGCCAGGAACCCTGCGGGTCTaGGAGCTGGAGGTGGGATGGCAAGGACCCTCTCCTGGCAACCTC +
Preference number: 5 (lower is better)
Translates to: LFWGSKLLLPGTLRV*ELEVGWQGPSPGNL
Trigger: GAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 90 bp TCAGGCTGGCCTGGGTTTGCTGCTCCGGCACGCGTCTGGCTTCTGTaGCAGCGTCACATAGCTCAGGCCGGCTCCGACGGCCATACCACT +
Preference number: 5 (lower is better)
Translates to: SGWPGFAAPARVWLL*QRHIAQAGSDGHTT
Trigger: AGTGGTATGGCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp GGTGACTTTTCAGGCTGGCCTGGGTTTGCTGCTCCGGCACGCGTCTaGCTTCTGTGGCAGCGTCACATAGCTCAGGCCGGCTCCGACGGC +
Preference number: 5 (lower is better)
Translates to: GDFSGWPGFAAPARV*LLWQRHIAQAGSDG
Trigger: GCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp CCACGCTCTCCAGAGACGCTGAGCGCCAGAGGTGACTTTTCAGGCTaGCCTGGGTTTGCTGCTCCGGCACGCGTCTGGCTTCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PRSPETLSARGDFSG*PGFAAPARVWLLWQ
Trigger: CTGCCACAGAAGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp GCAAGCTCCAACTCCTCCTCCTCGAGGGCCAACGATACGCACATCTaGGCGCGCTTCTCGCTCGCACAGGGCTGCAGCTTCAGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ASSNSSSSRANDTHI*ARFSLAQGCSFSAL
Trigger: GAGGGCACTGAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAGGAGGAGTTGGAGCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 90 bp GCAAGCTGCTCCTGCCAGGAACCCTGCGGGTCTGCGAGCTGGAGGTaGGATGGCAAGGACCCTCTCCTGGCAACCTCCACACTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: ASCSCQEPCGSASWR*DGKDPLLATSTLCL
Trigger: CAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CAA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGGGGCTGTGCCGGTTCTaGGGCAGCCGCGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLGLCRF*GSRAHR
Trigger: CCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCC...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp GACTTGGGACTCTCCACGCTCTCCAGAGACGCTGAGCGCCAGAGGTaGCTTTTCAGGCTGGCCTGGGTTTGCTGCTCCGGCACGCGTCTG +
Preference number: 5 (lower is better)
Translates to: DLGLSTLSRDAERQR*LFRLAWVCCSGTRL
Trigger: CAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGCGTGGAGAGTCCCAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 90 bp ACGCGGCACAGAGGAGCACCCTCTCCATCCAAGGACACCCCCACCTaGAAGGGCAAGGAAAGCGTGTGCTCCCGAGTATGCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TRHRGAPSPSKDTPT*KGKESVCSRVCSST
Trigger: GGTGCTGCTGCATACTCGGGAGCACACGCTTTCCTTGCCCTTGCAGGTGGGGGTGTCCTTGGATGGAGAGGGTGCTCCTCTGTGCCGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS CCA 90 bp CTGCTCCTGCCAGGAACCCTGCGGGTCTGCGAGCTGGAGGTGGGATaGCAAGGACCCTCTCCTGGCAACCTCCACACTGTGCTTGTGACA +
Preference number: 5 (lower is better)
Translates to: LLLPGTLRVCELEVG*QGPSPGNLHTVLVT
Trigger: TGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS TCA 90 bp AGGCGGCTTTGTTTCTCGGCGCCTCGCTGCTTCTCCTCGGTGGCCTaGAGTGCTCTCACCAGGTGGGCGTTCTCCACGTACAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRLCFSAPRCFSSVA*SALTRWAFSTYSSF
Trigger: GAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS GCA 90 bp CTGCCCTTGCTGGTAGCTCAGCTCCTGGTGGTAGCAGGCCAGGGCTaGCTGCTGGACGGCACTGTCCACTGTCATGAGCTCGTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LPLLVAQLLVVAGQG*LLDGTVHCHELVVK
Trigger: CTTGACAACGAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTACCACCAGGAGCTGAGCTACCAGCAAGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp AGAGGCGCAGGCTGGAGCACAGGGACACGAGGGATGAGGTTGTGGTaGTGTGGCAGCCGCTCTCCTCTGGGACCTGGTAATGAGACCAAG +
Preference number: 5 (lower is better)
Translates to: RGAGWSTGTRGMRLW*CGSRSPLGPGNETK
Trigger: CTTGGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACCACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp AGAAGAGGCGCAGGCTGGAGCACAGGGACACGAGGGATGAGGTTGTaGTGGTGTGGCAGCCGCTCTCCTCTGGGACCTGGTAATGAGACC +
Preference number: 5 (lower is better)
Translates to: RRGAGWSTGTRGMRL*WCGSRSPLGPGNET
Trigger: GGTCTCATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACCACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp CCAAGAGGCGGCTTTGTTTCTCGGCGCCTCGCTGCTTCTCCTCGGTaGCCTGAAGTGCTCTCACCAGGTGGGCGTTCTCCACGTACAGCT +
Preference number: 5 (lower is better)
Translates to: PRGGFVSRRLAASPR*PEVLSPGGRSPRTA
Trigger: AGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CCA 90 bp GTGGCAAGGCCATGGTCAAGCATGGCCGCAAGCAGAGGCTCTCCCTaGAGCAGACACTCCTGCGTTACTGTGGACCACCTGCGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: VARPWSSMAASRGSP*SRHSCVTVDHLRVE
Trigger: CTCCACACGCAGGTGGTCCACAGTAACGCAGGAGTGTCTGCTCCAGGGAGAGCCTCTGCTTGCGGCCATGCTTGACCATGGCCTTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS-3UTR CAA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCAAGGTCCTGCCTTGCCTaGTCACGCTCCCTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: TPASATCIFPQPPPPSCPRSCLA*SRSLAS
Trigger: GCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCT...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 90 bp GCTTTGTTTCTCGGCGCCTCGCTGCTTCTCCTCGGTGGCCTGAAGTaGTCTCACCAGGTGGGCGTTCTCCACGTACAGCTCCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: ALFLGASLLLLGGLK*SHQVGVLHVQLLQQ
Trigger: CTGCTGAAGGAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CCA 90 bp GTCATCCTTCTCTCTCTCCAGCGCTATTTTGGTCTCCCCCTCTTCTaGGGCAGCAAGCTGCTCCTGCCAGGAACCCTGCGGGTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: VILLSLQRYFGLPLF*GSKLLLPGTLRVCE
Trigger: CTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAGAGAGAAGGATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 90 bp GCCCTGCATGGTCCCTGGACACACAGAGGCGGCCTTCAGGATAGGTaGCAACGAGAGCCAGGGAACCCTAAGTCTAGGAGTGTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ALHGPWTHRGGLQDR*QREPGNPKSRSVAR
Trigger: CCTTGCCACACTCCTAGACTTAGGGTTCCCTGGCTCTCGTTGCCACCTATCCTGAAGGCCGCCTCTGTGTGTCCAGGGACCATGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS-3UTR CAA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGCAGGCTGGCCTGGGTTaGCTGCTCCGGCACGCGTCT +
Preference number: 5 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMQAGLG*LLRHAS
Trigger: AGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTG...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 90 bp TCTTTCACAAACTCCAGGTTCCTCTTCTCGGCCCTCTCCAGGTCCTaGCTTGCCTTGTCACGCTCCCTTGCCAGCTGCTCCACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SFTNSRFLFSALSRS*LALSRSLASCSTCP
Trigger: AGGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACCTGGAGTTTGTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000461642.2
CDS CCA 90 bp CACTTGAGCTCGTATTCCTTCAGGACTGCTGCGAACCGCTCCTCCTaGGCCAGGAGCTCTGCACTCTGTGGCTCCAGCTTGTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: HLSSYSFRTAANRSS*ARSSALCGSSLSFS
Trigger: GCTGAAGGACAAGCTGGAGCCACAGAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000461642.2
ENST00000489780.5
CDS CCA 90 bp CAACGAGAGCCAGGGAACCCTAAGTCTAGGAGTGTGGCAAGGCCATaGTCAAGCATGGCCGCAAGCAGAGGCTCTCCCTGGAGCAGACAC +
Preference number: 5 (lower is better)
Translates to: QREPGNPKSRSVARP*SSMAASRGSPWSRH
Trigger: GTGTCTGCTCCAGGGAGAGCCTCTGCTTGCGGCCATGCTTGACCATGGCCTTGCCACACTCCTAGACTTAGGGTTCCCTGGCTCTCGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS-3UTR CAA 90 bp ACGCCGGCTTCTGCAACATGCATATTCCCCCAGCCCCCACCTCCATCTTGCCCACTCTCCAGCGCTATTTaGGTCTCCCCCTCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TPASATCIFPQPPPPSCPLSSAI*VSPSSG
Trigger: CCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAG...TGGGCAAGATGGAGGTGGGGGCTGGGGGAATATGCATGTTGCAGAAGCCGGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 90 bp TGGCCAGGACCTGATCAGGAAAAGCGAAGCCAGAACCATCGTCAATaGTGGAGAAGAGGCGCAGGCTGGAGCACAGGGACACGAGGGATG +
Preference number: 5 (lower is better)
Translates to: WPGPDQEKRSQNHRQ*WRRGAGWSTGTRGM
Trigger: CATCCCTCGTGTCCCTGTGCTCCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTTCGCTTTTCCTGATCAGGTCCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp CAGGGAACCCTAAGTCTAGGAGTGTGGCAAGGCCATGGTCAAGCATaGCCGCAAGCAGAGGCTCTCCCTGGAGCAGACACTCCTGCGTTA +
Preference number: 5 (lower is better)
Translates to: QGTLSLGVWQGHGQA*PQAEALPGADTPAL
Trigger: TAACGCAGGAGTGTCTGCTCCAGGGAGAGCCTCTGCTTGCGGCCATGCTTGACCATGGCCTTGCCACACTCCTAGACTTAGGGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS CCA 90 bp AGGATAGGTGGCAACGAGAGCCAGGGAACCCTAAGTCTAGGAGTGTaGCAAGGCCATGGTCAAGCATGGCCGCAAGCAGAGGCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: RIGGNESQGTLSLGV*QGHGQAWPQAEALP
Trigger: AGGGAGAGCCTCTGCTTGCGGCCATGCTTGACCATGGCCTTGCCACACTCCTAGACTTAGGGTTCCCTGGCTCTCGTTGCCACCTATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS-3UTR CAA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAACACGAGGGATGAGGTaGTGGTGGTGTGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGTRGMR*WWCGSR
Trigger: GCGGCTGCCACACCACCACAACCTCATCCCTCGTGT...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGTCTCCAGGTCCTGCCTaGCCTTGTCACGCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLSPGPA*PCHAPL
Trigger: CAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGA...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTGCTTGCAGCTCATCGTaGCGGTCCTGCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSACSSS*RSCRSR
Trigger: CCGGGACCTGCAGGACCGCAACGATGAGCTGCAAGC...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGTTCCAAGAGGCGGCTTaGTTTCTCGGCGCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLFQEAA*FLGASL
Trigger: CAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAA...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp GACATGAGACTAAAAGGCAGACAGAGCAGGCACGTACCCGGCACTTaGGCTCGTATTCCTTCAGGACTGCTGCGAACCGCTCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: DMRLKGRQSRHVPGT*ARIPSGLLRTAPPG
Trigger: CCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTGCCGGGTACGTGCCTGCTCTGTCTGCCTTTTAGTCTCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS-3UTR CAA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTAGGTCCTGCCTTGCCTaGTCACGCTCCCTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSRSCLA*SRSLAS
Trigger: GCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCT...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGATCTCCAGGTCCTGCCTaGCCTTGTCACGCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGSPGPA*PCHAPL
Trigger: CAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGA...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCGGGCTGTGCCGGTTCTaGGGCAGCCGCGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSGLCRF*GSRAHR
Trigger: CCTGTGGGCGCGGCTGCCCAAGAACCGGCACAGCCC...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 90 bp CAAACAACGACCACGCCAGTTCTCCTTTCAGCGGAGACCTCACTCTaGAACAGGGCTACACTGGCCACAGACTACCCAGACAACACGGAC +
Preference number: 5 (lower is better)
Translates to: QTTTTPVLLSAETSL*NRATLATDYPDNTD
Trigger: GTCCGTGTTGTCTGGGTAGTCTGTGGCCAGTGTAGCCCTGTTGCAGAGTGAGGTCTCCGCTGAAAGGAGAACTGGCGTGGTCGTTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS-3UTR CAA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGACTGTCATGAGCTCGTaGTCAAGGGCCCAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMTVMSS*SRAQVS
Trigger: GCTGACCTGGGCCCTTGACAACGAGCTCATGACAGT...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp GTCCATAACTGCTCACTTACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCACTGTCATGAGCTCGTaGTCAAGGGCCCAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VHNCSLTCSLLTAPRIWLTVMSS*SRAQVS
Trigger: GCTGACCTGGGCCCTTGACAACGAGCTCATGACAGT...GAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTAAGTGAGCAGTTATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGATGCAGGTCCCGGCACTaGAGCTCGTATTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGCRSRH*SSYSFR
Trigger: CCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCA...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCGCCTTCCAGCTCAGCTaGCAGCTCATCGTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: LYRALTLHFTLTARVGSTAFQLS*QLIVAV
Trigger: GACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGC...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp TCCCTGCACCTGGTCTTGACTTTCCTCAAGGGTCTGGGTCAGCTCTaGCCATGGCAGCTGCAGGCTCTGATGTTCCTGATTCAGGCATTC +
Preference number: 5 (lower is better)
Translates to: SLHLVLTFLKGLGQL*PWQLQALMFLIQAF
Trigger: GAATGCCTGAATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000496509.2
CDS-3UTR CAA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATTTCTGTGTCCTGGGCTaGCCTGCGGCGAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: REWQNWEFCQGKLLRTANFCVLG*PAARPG
Trigger: GCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAA...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CAA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGATGCAGCTTCAAGCTCTaGCCGAACCCTTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGCSFKL*PNPSQI
Trigger: GATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCA...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGCAGCTTCAAGCTCTaGCCGAACCCTTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: PSFLAGLTFPASEAFSGMCSFKL*PNPSQI
Trigger: GATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCA...CATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 90 bp CAGACCCAGACTCTGCTGCGTCCAGTGTTAGCTTCCAGTGAACCTTaGTGGGGCCTGATTCTTTTCAAACAACGACCACGCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QTQTLLRPVLASSEP*WGLILFKQRPRQFS
Trigger: GGAGAACTGGCGTGGTCGTTGTTTGAAAAGAATCAGGCCCCAGCAAGGTTCACTGGAAGCTAACACTGGACGCAGCAGAGTCTGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS-3UTR CAA 90 bp ACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTGAACCATTCACATACTTaGGAGGGATGGCACTGGAGG +
Preference number: 5 (lower is better)
Translates to: TCSLLTAPRIWLQRVAKLNHSHT*EGWHWR
Trigger: CCTCCAGTGCCATCCCTCCAAAGTATGTGAATGGTT...CAGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCGCTTGCAGCTCATCGTaGCGGTCCTGCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSACSSS*RSCRSR
Trigger: CCGGGACCTGCAGGACCGCAACGATGAGCTGCAAGC...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTACGATGCTCCTCGTTTaGGGCCTGGTGGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCTMLLV*GLVGRS
Trigger: GCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGT...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTTCCAAGAGGCGGCTTaGTTTCTCGGCGCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PRADHSLTICGVNKESQSFQEAA*FLGASL
Trigger: CAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAA...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp CTCGGTTTAACCCGAGTGGAAGACTCTAGAAGTAGCGCGGGCTCATaGCTGAAGAGGCCAAGCTGGAATTCCTCAAGACTCACTTTGCCG +
Preference number: 5 (lower is better)
Translates to: LGLTRVEDSRSSAGS*LKRPSWNSSRLTLP
Trigger: CGGCAAAGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAGAGTCTTCCACTCGGGTTAAACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTAACCATTCACATACTTaGGAGGGATGGCACTGGAGG +
Preference number: 5 (lower is better)
Translates to: YLLLADSSQDLAPESGKTNHSHT*EGWHWR
Trigger: CCTCCAGTGCCATCCCTCCAAAGTATGTGAATGGTT...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACCCTGCTCCAGATGCTaGATTTTCTTCTCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSPCSRC*IFFSVS
Trigger: GCTCACGGAGAAGAAAATCAAGCATCTGGAGCAGGG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTCTCTGTGGCTCCAGCTaGTCCTTCAGCACAAACTCC +
Preference number: 5 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCLCGSS*SFSTNS
Trigger: GGAGTTTGTGCTGAAGGACAAGCTGGAGCCACAGAG...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATCATCCGTGGCTGGGTTaGCGAGGCGTCTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNHPWLG*RGVSLC
Trigger: ACAGAGAGAGACGCCTCGCAAACCCAGCCACGGATG...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CAA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTTCCCTGCACCTGGTCTaGACTTTCCTCAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCSLHLV*TFLKGL
Trigger: CAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGGGA...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp TCCAGATGCTTGATTTTCTTCTCCGTGAGCTGCTCCAGGGTGGAGTaGCAGTCGTCCATCTCTTTCACAAACTCCAGGTTCCTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: SRCLIFFSVSCSRVE*QSSISFTNSRFLFS
Trigger: CGAGAAGAGGAACCTGGAGTTTGTGAAAGAGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGCATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAAGGCAGCACAGTGGCGAACACCAGCATTaGAAGACAACACAGCCACAA +
Preference number: 5 (lower is better)
Translates to: SDVPGLMAHDPRNLRQHSGEHQH*KTTQPQ
Trigger: TTGTGGCTGTGTTGTCTTCAAATGCTGGTGTTCGCC...ACTGTGCTGCCTTAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCTCCTTTCTCGCTGGGTaGACGTTCCCAGCGAGTGAA +
Preference number: 5 (lower is better)
Translates to: AKGNYSGPLIKTPASATCSFLAG*TFPASE
Trigger: TTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp TGCAAGGGCAAGGAAAGCGTGTGCTCCCGAGTATGCAGCAGCACCTaGATATTTAGAAGGAGCCCATTTCTTTGGAATTCGGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: CKGKESVCSRVCSST*IFRRSPFLWNSDSQ
Trigger: CTGGCTGTCCGAATTCCAAAGAAATGGGCTCCTTCTAAATATTCAGGTGCTGCTGCATACTCGGGAGCACACGCTTTCCTTGCCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS-3UTR CAA 90 bp TCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGAGCCTCTTCATCTGACTaGGGACTCTCCACGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLTICGVNKESQSSDVPGASSSD*GLSTLS
Trigger: GGAGAGCGTGGAGAGTCCCAAGTCAGATGAAGAGGC...TCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTGCCTCTTCATCTGACTaGGGACTCTCCACGCTCTCC +
Preference number: 5 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAASSSD*GLSTLS
Trigger: GGAGAGCGTGGAGAGTCCCAAGTCAGATGAAGAGGC...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATGCCTTCCAGCTCAGCTaGCAGCTCATCGTTGCGGTC +
Preference number: 5 (lower is better)
Translates to: REWQNWEFCQGKLLRTANAFQLS*QLIVAV
Trigger: GACCGCAACGATGAGCTGCAAGCTGAGCTGGAAGGC...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCCTGGGTCCTGAGGTCTaGGTAATGCTCCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: PRADHSLTICGVNKESQSLGPEV*VMLLYL
Trigger: CAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAG...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCACGATGCTCCTCGTTTaGGGCCTGGTGGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSTMLLV*GLVGRS
Trigger: GCTTCTACCCACCAGGCCCAAAACGAGGAGCATCGT...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CTGTACAGAGCCCTGACTTTACATTTCACTCTGACAGCCAGGGTCGGAAGCACCTCTAAGTTTTTGGATTaGGTCACTCTGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LYRALTLHFTLTARVGSTSKFLD*VTLLLP
Trigger: GGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGA...GGTGCTTCCGACCCTGGCTGTCAGAGTGAAATGTAAAGTCAGGGCTCTGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TACCTGCTCCTTGCTGACAGCTCCCAGGATCTGGCTCCAGAGAGTGGCAAAACTCTACTGACGAGTTTGTaGAGAGCGCGAACTTTTTCT +
Preference number: 5 (lower is better)
Translates to: YLLLADSSQDLAPESGKTLLTSL*RARTFS
Trigger: AGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAG...AGTTTTGCCACTCTCTGGAGCCAGATCCTGGGAGCTGTCAGCAAGGAGCAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 90 bp ACTGTTTTCTTGATTTTCTTCTCCGTGAGCTGCTCCAGGGTGGAGTaGCAGTCGTCCATCTCTTTCACAAACTCCAGGTTCCTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: TVFLIFFSVSCSRVE*QSSISFTNSRFLFS
Trigger: CGAGAAGAGGAACCTGGAGTTTGTGAAAGAGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGAAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS-3UTR CAA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTTCTAAGTTTTTGGATTaGGTCACTCTGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCSKFLD*VTLLLP
Trigger: GGGCAGCAGCAGAGTGACCAAATCCAAAAACTTAGA...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CTGCGGGGTGAACAAAGAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCACTACTGACGAGTTTGTaGAGAGCGCGAACTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LRGEQRIPILRCPRTHGSLLTSL*RARTFS
Trigger: AGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAG...TGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTCTTTGTTCACCCCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TTCCCCTCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAGCAAAACTGGGAATTTaGCCAAGGGAAATTACTCAG +
Preference number: 5 (lower is better)
Translates to: FPSFLAGLTFPASEAFSGAKLGI*PREITQ
Trigger: CTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGC...TCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCTCCTTTCTCGCTGGGTaGACGTTCCCAGCGAGTGAA +
Preference number: 5 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSSFLAG*TFPASE
Trigger: TTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTCCCTGCTCCAGATGCTaGATTTTCTTCTCCGTGAGC +
Preference number: 5 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAPCSRC*IFFSVS
Trigger: GCTCACGGAGAAGAAAATCAAGCATCTGGAGCAGGG...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCATCTGGGTCCTGAGGTCTaGGTAATGCTCCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: QGKLLRTANKNAGFCNMHLGPEV*VMLLYL
Trigger: CAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAG...ATGCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATTCCCTGCACCTGGTCTaGACTTTCCTCAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: REWQNWEFCQGKLLRTANSLHLV*TFLKGL
Trigger: CAGACCCTTGAGGAAAGTCAAGACCAGGTGCAGGGA...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp GAATCCCAGGTCTGCAGCTGTCCTTGTGCTTCAAATAATTCATTCTaGGCTTCTTTAGTGCTCTCGGCCTCTTCATCTGACTTGGGACTC +
Preference number: 5 (lower is better)
Translates to: ESQVCSCPCASNNSF*ASLVLSASSSDLGL
Trigger: GAGTCCCAAGTCAGATGAAGAGGCCGAGAGCACTAAAGAAGCTCAGAATGAATTATTTGAAGCACAAGGACAGCTGCAGACCTGGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 90 bp AGGCCAAGCTGGAATTCCTCAAGACTCACTTTGCCGTCTCCGTCTTaGTCCAGTTTGTTAAACAGGTCTTCGAGTTCCTCTTTCTCGAGT +
Preference number: 5 (lower is better)
Translates to: RPSWNSSRLTLPSPS*SSLLNRSSSSSFSS
Trigger: ACTCGAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCAGCTTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCCAGGGCAGACCATTCATTAACTATCTGCGGGGTGAACAAAGAATCCCAATCCTTTGCCGTCTCCGTCTaGATCCAGTTTGTTAAACAG +
Preference number: 5 (lower is better)
Translates to: PRADHSLTICGVNKESQSFAVSV*IQFVKQ
Trigger: CTGTTTAACAAACTGGATCAAGACGGAGACGGCAAA...GGATTGGGATTCTTTGTTCACCCCGCAGATAGTTAATGAATGGTCTGCCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp GAATCCCAATCCTCAGATGTCCCAGGACTCATGGCTCATGACCCACGGAATCTAGAGCAGGCCTTTTCCTaGTCTTTCTTTAAAACCTCA +
Preference number: 5 (lower is better)
Translates to: ESQSSDVPGLMAHDPRNLEQAFS*SFFKTS
Trigger: TGAGGTTTTAAAGAAAGACAAGGAAAAGGCCTGCTC...TAGATTCCGTGGGTCATGAGCCATGAGTCCTGGGACATCTGAGGATTGGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp AGAGAGTGGCAAAACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATGGCGAACACCAGCATTaGAAGACAACACAGCCACAA +
Preference number: 5 (lower is better)
Translates to: REWQNWEFCQGKLLRTANGEHQH*KTTQPQ
Trigger: TTGTGGCTGTGTTGTCTTCAAATGCTGGTGTTCGCC...ATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGCCACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCTGCAGGTCCCGGCACTaGAGCTCGTATTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRACRSRH*SSYSFR
Trigger: CCTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCA...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCCTTTCTCGCTGGGTTGACGTTCCCAGCGAGTGAAGCCTTTTCTGGAATGTGTTTCAACTCTAAGTTTTaGGATTTGGTCACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SFLAGLTFPASEAFSGMCFNSKF*DLVTLL
Trigger: CAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAA...ACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAGCGAGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCTTTGCCGTCTCCGTCTaGATCCAGTTTGTTAAACAG +
Preference number: 5 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSFAVSV*IQFVKQ
Trigger: CTGTTTAACAAACTGGATCAAGACGGAGACGGCAAA...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp TCTAATAAGCTAAGCTTAAAGCAGAACAGTGAAATGGCAAAACTGTACAGAGCCCTCTGTGGCTCCAGCTaGTCCTTCAGCACAAACTCC +
Preference number: 5 (lower is better)
Translates to: SNKLSLKQNSEMAKLYRALCGSS*SFSTNS
Trigger: GGAGTTTGTGCTGAAGGACAAGCTGGAGCCACAGAG...GGCTCTGTACAGTTTTGCCATTTCACTGTTCTGCTTTAAGCTTAGCTTATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CGAGTGAAGCCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATTCCAGATGTAGAAGTTaGGTTTCCATGTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: RVKPFLECVYAPSTKSSNSRCRS*VSMSSF
Trigger: GAAGGATGACATGGAAACCAAACTTCTACATCTGGA...ATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGGCTTCACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS-3UTR CAA 90 bp GCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTTCTGCAACATGCTTCAACTCTAAGTTTTaGGATTTGGTCACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: AKGNYSGPLIKTPASATCFNSKF*DLVTLL
Trigger: CAGCAGAGTGACCAAATCCAAAAACTTAGAGTTGAA...GCATGTTGCAGAAGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp CCTTTTCTGGAATGTGTGTACGCACCCTCCACCAAGAGTTCTAATAAGCTAAGCATCCTACTGACGAGTTaGTTGAGAGCGCGAACTTTT +
Preference number: 5 (lower is better)
Translates to: PFLECVYAPSTKSSNKLSILLTS*LRARTF
Trigger: AAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGAT...GCTTAGCTTATTAGAACTCTTGGTGGAGGGTGCGTACACACATTCCAGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS-3UTR CAA 90 bp ACTGGGAATTTTGCCAAGGGAAATTACTCAGGACCGCTAATAAAAACGCCGGCTGCAAAACTGGGAATTTaGCCAAGGGAAATTACTCAG +
Preference number: 5 (lower is better)
Translates to: TGNFAKGNYSGPLIKTPAAKLGI*PREITQ
Trigger: CTGAGTAATTTCCCTTGGCAAAATTCCCAGTTTTGC...AGCCGGCGTTTTTATTAGCGGTCCTGAGTAATTTCCCTTGGCAAAATTCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp GGGGCGGGGGCCGGGCTCTGCGTAGCTTCTGTGTCCTaGGCTTGCCTGCGGCGAGGCCCGGCTCCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: GAGAGLCVASVS*ACLRRGPAPAA
Trigger: GGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CAA 72 bp GGGGGCCGGGCTCTGCGTAGCTTCTGTGTCCTGGGCTaGCCTGCGGCGAGGCCCGGCTCCTGCCGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GGRALRSFCVLG*PAARPGSCRLL
Trigger: GAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp CGCCCCACGTCCCACTCCAGCGCGGCCCTCTGCCTGTaGGCCTGCTCCCAGAACAGCTCTCGCTCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RPTSHSSAALCL*ACSQNSSRSAS
Trigger: GGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGTGGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000489780.5
CDS CCA 72 bp GGGTCAGCCCCCTCCCAGGGACGGGCTCCTACCTGCTaGGCCGAGTCCAGGGAGCTGCCGTCTGCGCCCATC +
Preference number: 6 (lower is better)
Translates to: GSAPSQGRAPTC*AESRELPSAPI
Trigger: GATGGGCGCAGACGGCAGCTCCCTGGACTCGGCCCAGCAGGTAGGAGCCCGTCCCTGGGAGGGGGCTGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489780.5
CDS CAA 90 bp GGCAGGGGCGGGGGCCGGGCTCTGCGTAGCTTCTGTGTCCTGGGCTaGCCTGCGGCGAGGCCCGGCTCCTGCCGCCTCCTCAGACTCTCT +
Preference number: 6 (lower is better)
Translates to: GRGGGRALRSFCVLG*PAARPGSCRLLRLS
Trigger: AGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACAGAAGCTACGCAGAGCCCGGCCCCCGCCCCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp CACAGTGCCTGGGTGCAGCAGGGTGCCAGGCCCATCTaGTCAGGCTCGGGGCCGCGGGCTGTGTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: HSAWVQQGARPI*SGSGPRAVSCS
Trigger: GCTGCAGGACACAGCCCGCGGCCCCGAGCCTGAGCAGATGGGCCTGGCACCCTGCTGCACCCAGGCACTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp TTCAGTGCCCTCTCCAGCTCCAGCTGCTCCGACCTCTaGCTCCCGCGTGGCAGGGGTCCCTGCGGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: FSALSSSSCSDL*LPRGRGPCGGS
Trigger: GGAGCCGCCGCAGGGACCCCTGCCACGCGGGAGCCAGAGGTCGGAGCAGCTGGAGCTGGAGAGGGCACTGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp TGTGTCCTGGGCTTGCCTGCGGCGAGGCCCGGCTCCTaGCGCCTCCTCAGACTCTCTGCCATCACCTGGGGC +
Preference number: 6 (lower is better)
Translates to: CVLGLPAARPGS*RLLRLSAITWG
Trigger: GCCCCAGGTGATGGCAGAGAGTCTGAGGAGGCGGCAGGAGCCGGGCCTCGCCGCAGGCAAGCCCAGGACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp AGCCTGTCCCCTGCACGAAGCGGCCGGCCTCAGGGGTaGCTCCCACATCCGTGGCTGGGTTTGCGAGGCGTC +
Preference number: 6 (lower is better)
Translates to: SLSPARSGRPQG*LPHPWLGLRGV
Trigger: GACGCCTCGCAAACCCAGCCACGGATGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS TCA 72 bp AAGGACCCTCTCCTGGCAACCTCCACACTGTGCTTGTaGCACCCAGGCTCCAGGGCGCCCTCGGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: KDPLLATSTLCL*HPGSRAPSARA
Trigger: GGCCCGGGCCGAGGGCGCCCTGGAGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS TCA 72 bp CATCCAGGCGCCTCCTGGCCTGCTCTCCCTGAAGGCTaGGCAGGCGATGCAGCTCGGCCACACGGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: HPGASWPALPEG*AGDAARPHGPG
Trigger: CCCAGGACCGTGTGGCCGAGCTGCATCGCCTGCTCAGCCTTCAGGGAGAGCAGGCCAGGAGGCGCCTGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
ENST00000496509.2
CDS GCA 72 bp CCACAGCCAGCTCCTGCTCGCTCAGGTGTCCGCTGCTaGCCACCCCCAGCTCTTCCCACACGCCCCGGATCT +
Preference number: 6 (lower is better)
Translates to: PQPAPARSGVRC*PPPALPTRPGS
Trigger: AGATCCGGGGCGTGTGGGAAGAGCTGGGGGTGGGCAGCAGCGGACACCTGAGCGAGCAGGAGCTGGCTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 72 bp ACGTCCCACTCCAGCGCGGCCCTCTGCCTGTGGGCCTaGTCCCAGAACAGCTCTCGCTCCGCCTCCACCTCA +
Preference number: 6 (lower is better)
Translates to: TSHSSAALCLWA*SQNSSRSASTS
Trigger: TGAGGTGGAGGCGGAGCGAGAGCTGTTCTGGGAGCAGGCCCACAGGCAGAGGGCCGCGCTGGAGTGGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000489780.5
CDS GCA 72 bp TGCCACCAGCCCATCTTTCGGCAGGGCCTGCATCTCTaGTTCCAGGGAGGGCCCGTCCACTCGCTTCCCGCG +
Preference number: 6 (lower is better)
Translates to: CHQPIFRQGLHL*FQGGPVHSLPA
Trigger: CGCGGGAAGCGAGTGGACGGGCCCTCCCTGGAAGCAGAGATGCAGGCCCTGCCGAAAGATGGGCTGGTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp GGGCCTGCTGCTCCGAGGCCTGCTCCTGGGTGCCCCTaGTCCAGCTTCGTGCTCGCTCTTCCTGAATGGCCT +
Preference number: 6 (lower is better)
Translates to: GPAAPRPAPGCP*SSFVLALPEWP
Trigger: AGGCCATTCAGGAAGAGCGAGCACGAAGCTGGAGCAGGGGCACCCAGGAGCAGGCCTCGGAGCAGCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp CCTGGGTTTGCTGCTCCGGCACGCGTCTGGCTTCTGTaGCAGCGTCACATAGCTCAGGCCGGCTCCGACGGC +
Preference number: 6 (lower is better)
Translates to: PGFAAPARVWLL*QRHIAQAGSDG
Trigger: GCCGTCGGAGCCGGCCTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGCAGCAAACCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp GCCTCAGCCTCTCTCCTGATCTGCTGCAGGTGGCTGTaGTGCCGCAGGGCCAGGCCACACAGTGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: ASASLLICCRWL*CRRARPHSAWV
Trigger: CACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGGAGAGAGGCTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp CTTCCTGAATGGCCTGTAGCCTCTCAGCCTGTCCCCTaGACGAAGCGGCCGGCCTCAGGGGTGGCTCCCACA +
Preference number: 6 (lower is better)
Translates to: LPEWPVASQPVP*TKRPASGVAPT
Trigger: TGTGGGAGCCACCCCTGAGGCCGGCCGCTTCGTGCAGGGGACAGGCTGAGAGGCTACAGGCCATTCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp TTGGTCTCCCCCTCTTCTGGGGCAGCAAGCTGCTCCTaGCAGGAACCCTGCGGGTCTGCGAGCTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LVSPSSGAASCS*QEPCGSASWRW
Trigger: CCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp TCAGGCTGGCCTGGGTTTGCTGCTCCGGCACGCGTCTaGCTTCTGTGGCAGCGTCACATAGCTCAGGCCGGC +
Preference number: 6 (lower is better)
Translates to: SGWPGFAAPARV*LLWQRHIAQAG
Trigger: GCCGGCCTGAGCTATGTGACGCTGCCACAGAAGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp AGCTGCTCCTGCCAGGAACCCTGCGGGTCTGCGAGCTaGAGGTGGGATGGCAAGGACCCTCTCCTGGCAACC +
Preference number: 6 (lower is better)
Translates to: SCSCQEPCGSAS*RWDGKDPLLAT
Trigger: GGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CAA 90 bp GCTGCTCCAGCCCCGCTGCGCTCGCGCCGAAAGGCTCTGGCTCCTTaGGGACAATATCCCCATCCACTCCACAGGGCTGCATGCGTGACC +
Preference number: 6 (lower is better)
Translates to: AAPAPLRSRRKALAP*GQYPHPLHRAACVT
Trigger: GGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp TCTTCTGGGGCAGCAAGCTGCTCCTGCCAGGAACCCTaGGGGTCTGCGAGCTGGAGGTGGGATGGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: SSGAASCSCQEP*GSASWRWDGKD
Trigger: GTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp CTCGGCGCCTCGCTGCTTCTCCTCGGTGGCCTGAAGTaGTCTCACCAGGTGGGCGTTCTCCACGTACAGCTC +
Preference number: 6 (lower is better)
Translates to: LGASLLLLGGLK*SHQVGVLHVQL
Trigger: GAGCTGTACGTGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CCA 72 bp GCAGGCTGGAGCACAGGGACACGAGGGATGAGGTTGTaGTGGTGTGGCAGCCGCTCTCCTCTGGGACCTGGT +
Preference number: 6 (lower is better)
Translates to: AGWSTGTRGMRL*WCGSRSPLGPG
Trigger: ACCAGGTCCCAGAGGAGAGCGGCTGCCACACCACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp TCCTGCCAGGAACCCTGCGGGTCTGCGAGCTGGAGGTaGGATGGCAAGGACCCTCTCCTGGCAACCTCCACA +
Preference number: 6 (lower is better)
Translates to: SCQEPCGSASWR*DGKDPLLATST
Trigger: TGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAGACCCGCAGGGTTCCTGGCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS TCA 72 bp CTCTCCACGCTCTCCAGAGACGCTGAGCGCCAGAGGTaGCTTTTCAGGCTGGCCTGGGTTTGCTGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: LSTLSRDAERQR*LFRLAWVCCSG
Trigger: GCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGGAGAGCGTGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 72 bp CTGGTAGCTCAGCTCCTGGTGGTAGCAGGCCAGGGCTaGCTGCTGGACGGCACTGTCCACTGTCATGAGCTC +
Preference number: 6 (lower is better)
Translates to: LVAQLLVVAGQG*LLDGTVHCHEL
Trigger: GAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGCCTGCTACCACCAGGAGCTGAGCTACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp CCAGAGACGCTGAGCGCCAGAGGTGACTTTTCAGGCTaGCCTGGGTTTGCTGCTCCGGCACGCGTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PETLSARGDFSG*PGFAAPARVWL
Trigger: AAGCCAGACGCGTGCCGGAGCAGCAAACCCAGGCCAGCCTGAAAAGTCACCTCTGGCGCTCAGCGTCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp AACTCCTCCTCCTCGAGGGCCAACGATACGCACATCTaGGCGCGCTTCTCGCTCGCACAGGGCTGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: NSSSSRANDTHI*ARFSLAQGCSF
Trigger: GAAGCTGCAGCCCTGTGCGAGCGAGAAGCGCGCCCAGATGTGCGTATCGTTGGCCCTCGAGGAGGAGGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp CTGCTCCAGCCCCGCTGCGCTCGCGCCGAAAGGCTCTaGCTCCTTTGGGACAATATCCCCATCCACTCCACA +
Preference number: 6 (lower is better)
Translates to: LLQPRCARAERL*LLWDNIPIHST
Trigger: TGTGGAGTGGATGGGGATATTGTCCCAAAGGAGCCAGAGCCTTTCGGCGCGAGCGCAGCGGGGCTGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CAA 72 bp TTTCCTGGCTCTGGGCCTTGTTGTCAACAGCAGGCCTaGGGTCAGCCCCCTCCCAGGGACGGGCTCCTACCT +
Preference number: 6 (lower is better)
Translates to: FPGSGPCCQQQA*GQPPPRDGLLP
Trigger: AGGTAGGAGCCCGTCCCTGGGAGGGGGCTGACCCAAGGCCTGCTGTTGACAACAAGGCCCAGAGCCAGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489780.5
CDS CAA 90 bp GCCAGGGCTGCCTGCTGGACGGCACTGTCCACTGTCATGAGCTCGTaGTCAAGGGCCCAGGTCAGCTCCAGAAGGTTCACCTTCTCGTCC +
Preference number: 6 (lower is better)
Translates to: ARAACWTALSTVMSS*SRAQVSSRRFTFSS
Trigger: GGACGAGAAGGTGAACCTTCTGGAGCTGACCTGGGCCCTTGACAACGAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp CCAGGGCTGCCTGCTGGACGGCACTGTCCACTGTCATaGGCTCGTTGTCAAGGGCCCAGGTCAGCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: PGLPAGRHCPLS*ARCQGPRSAPE
Trigger: TTCTGGAGCTGACCTGGGCCCTTGACAACGAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGCAGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp CTATGGAACTCCAGTCTGATCTGCTGCAGGTGGCTGTaGTGCCGCAGGGCCAGGCCACACAGTGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LWNSSLICCRWL*CRRARPHSAWV
Trigger: CACCCAGGCACTGTGTGGCCTGGCCCTGCGGCATCACAGCCACCTGCAGCAGATCAGACTGGAGTTCCATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336104.5
ENST00000422516.5
CDS GCA 72 bp AACTCCAGGTTCCTCTTCTCGGCCCTCTCCAGGTCCTaGCTTGCCTTGTCACGCTCCCTTGCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: NSRFLFSALSRS*LALSRSLASCS
Trigger: GGAGCAGCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACCTGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000461642.2
CDS GCA 72 bp TTGGGACAATATCCCCATCCACTCCACAGGGCTGCATaGGTGACCACCTCTCTGAGGGGCCGTGGGATGCCG +
Preference number: 6 (lower is better)
Translates to: LGQYPHPLHRAA*VTTSLRGRGMP
Trigger: CGGCATCCCACGGCCCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp AGTTCCTCTTTCTCGAGTCCCTGGAGCCCGACGCTCTaGCAGACCACAGCCAGCTCCTGCTCGCTCAGGTGT +
Preference number: 6 (lower is better)
Translates to: SSSFSSPWSPTL*QTTASSCSLRC
Trigger: ACACCTGAGCGAGCAGGAGCTGGCTGTGGTCTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGAGGAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp GGCTGGAGCACAGGGACACGAGGGATGAGGTTGTGGTaGTGTGGCAGCCGCTCTCCTCTGGGACCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: GWSTGTRGMRLW*CGSRSPLGPGN
Trigger: ATTACCAGGTCCCAGAGGAGAGCGGCTGCCACACCACCACAACCTCATCCCTCGTGTCCCTGTGCTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp CTGCGAGCTGGAGGTGGGATGGCAAGGACCCTCTCCTaGCAACCTCCACACTGTGCTTGTGACACCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LRAGGGMARTLS*QPPHCACDTQA
Trigger: AGCCTGGGTGTCACAAGCACAGTGTGGAGGTTGCCAGGAGAGGGTCCTTGCCATCCCACCTCCAGCTCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp GGCTTTGTTTCTCGGCGCCTCGCTGCTTCTCCTCGGTaGCCTGAAGTGCTCTCACCAGGTGGGCGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: GFVSRRLAASPR*PEVLSPGGRSP
Trigger: TGGAGAACGCCCACCTGGTGAGAGCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CAA 90 bp TCACAAACTCCAGGTTCCTCTTCTCGGCCCTCTCCAGGTCCTGCCTaGCCTTGTCACGCTCCCTTGCCAGCTGCTCCACCTGCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: SQTPGSSSRPSPGPA*PCHAPLPAAPPALA
Trigger: AGCAAGGGCAGGTGGAGCAGCTGGCAAGGGAGCGTGACAAGGCAAGGCAGGACCTGGAGAGGGCCGAGAAGAGGAACCTGGAGTTTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 72 bp AGAGGAGCACCCTCTCCATCCAAGGACACCCCCACCTaGAAGGGCAAGGAAAGCGTGTGCTCCCGAGTATGC +
Preference number: 6 (lower is better)
Translates to: RGAPSPSKDTPT*KGKESVCSRVC
Trigger: GCATACTCGGGAGCACACGCTTTCCTTGCCCTTGCAGGTGGGGGTGTCCTTGGATGGAGAGGGTGCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS CCA 72 bp TCGTATTCCTTCAGGACTGCTGCGAACCGCTCCTCCTaGGCCAGGAGCTCTGCACTCTGTGGCTCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SYSFRTAANRSS*ARSSALCGSSL
Trigger: CAAGCTGGAGCCACAGAGTGCAGAGCTCCTGGCCCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000461642.2
ENST00000489780.5
CDS CCA 72 bp CCATGGTCAAGCATGGCCGCAAGCAGAGGCTCTCCCTaGAGCAGACACTCCTGCGTTACTGTGGACCACCTG +
Preference number: 6 (lower is better)
Translates to: PWSSMAASRGSP*SRHSCVTVDHL
Trigger: CAGGTGGTCCACAGTAACGCAGGAGTGTCTGCTCCAGGGAGAGCCTCTGCTTGCGGCCATGCTTGACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS CCA 72 bp CCAGGGAACCCTAAGTCTAGGAGTGTGGCAAGGCCATaGTCAAGCATGGCCGCAAGCAGAGGCTCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: PGNPKSRSVARP*SSMAASRGSPW
Trigger: CCAGGGAGAGCCTCTGCTTGCGGCCATGCTTGACCATGGCCTTGCCACACTCCTAGACTTAGGGTTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS CAA 72 bp GCCTGCTGGACGGCACTGTCCACTGTCATGAGCTCGTaGTCAAGGGCCCAGGTCAGCTCCAGAAGGTTCACC +
Preference number: 6 (lower is better)
Translates to: ACWTALSTVMSS*SRAQVSSRRFT
Trigger: GGTGAACCTTCTGGAGCTGACCTGGGCCCTTGACAACGAGCTCATGACAGTGGACAGTGCCGTCCAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 72 bp TCCTTTGGGACAATATCCCCATCCACTCCACAGGGCTaGATGCGTGACCACCTCTCTGAGGGGCCGTGGGAT +
Preference number: 6 (lower is better)
Translates to: SFGTISPSTPQG*MRDHLSEGPWD
Trigger: ATCCCACGGCCCCTCAGAGAGGTGGTCACGCATGCAGCCCTGTGGAGTGGATGGGGATATTGTCCCAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CCA 72 bp GGCAACGAGAGCCAGGGAACCCTAAGTCTAGGAGTGTaGCAAGGCCATGGTCAAGCATGGCCGCAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GNESQGTLSLGV*QGHGQAWPQAE
Trigger: CTCTGCTTGCGGCCATGCTTGACCATGGCCTTGCCACACTCCTAGACTTAGGGTTCCCTGGCTCTCGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS CAA 90 bp GGACATGAGACTAAAAGGCAGACAGAGCAGGCACGTACCCGGCACTaGAGCTCGTATTCCTTCAGGACTGCTGCGAACCGCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GHETKRQTEQARTRH*SSYSFRTAANRSSW
Trigger: CCAGGAGGAGCGGTTCGCAGCAGTCCTGAAGGAATACGAGCTCAAGTGCCGGGTACGTGCCTGCTCTGTCTGCCTTTTAGTCTCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS GCA 72 bp ACCACGCCAGTTCTCCTTTCAGCGGAGACCTCACTCTaGAACAGGGCTACACTGGCCACAGACTACCCAGAC +
Preference number: 6 (lower is better)
Translates to: TTPVLLSAETSL*NRATLATDYPD
Trigger: GTCTGGGTAGTCTGTGGCCAGTGTAGCCCTGTTGCAGAGTGAGGTCTCCGCTGAAAGGAGAACTGGCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS CCA 72 bp TTAAACAGGTCTTCGAGTTCCTCTTTCTCGAGTCCCTaGAGCCCGACGCTCTGGCAGACCACAGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LNRSSSSSFSSP*SPTLWQTTASS
Trigger: GGAGCTGGCTGTGGTCTGCCAGAGCGTCGGGCTCCAGGGACTCGAGAAAGAGGAACTCGAAGACCTGTTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CAA 72 bp GTTGAGAGCGCGAACTTTTTCTTCCAAGAGGCGGCTTaGTTTCTCGGCGCCTCGCTGCTTCTCCTCGGTGGC +
Preference number: 6 (lower is better)
Translates to: VESANFFFQEAA*FLGASLLLLGG
Trigger: GCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CAA 90 bp GACGAGTTTGTTGAGAGCGCGAACTTTTTCTTCCAAGAGGCGGCTTaGTTTCTCGGCGCCTCGCTGCTTCTCCTCGGTGGCCTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: DEFVESANFFFQEAA*FLGASLLLLGGLKC
Trigger: GCACTTCAGGCCACCGAGGAGAAGCAGCGAGGCGCCGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS GCA 72 bp CCTGATCAGGAAAAGCGAAGCCAGAACCATCGTCAATaGTGGAGAAGAGGCGCAGGCTGGAGCACAGGGACA +
Preference number: 6 (lower is better)
Translates to: PDQEKRSQNHRQ*WRRGAGWSTGT
Trigger: TGTCCCTGTGCTCCAGCCTGCGCCTCTTCTCCAGCATTGACGATGGTTCTGGCTTCGCTTTTCCTGATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp CAGTCCCCGTGGTGTCGCAGCTGCTGTAGACTTCCCTaGGCTGCGAGACATAGTGGTTCTCTTCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: QSPWCRSCCRLP*AARHSGSLLHP
Trigger: TGGATGAAGAAGAGAACCACTATGTCTCGCAGCTCAGGGAAGTCTACAGCAGCTGCGACACCACGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp AGGTCAGCTCCAGAAGGTTCACCTTCTCGTCCACGCTaGAGTCCAGGCTCTGCAAGATCTCCCTGCCATTCT +
Preference number: 6 (lower is better)
Translates to: RSAPEGSPSRPR*SPGSARSPCHS
Trigger: AGAATGGCAGGGAGATCTTGCAGAGCCTGGACTTCAGCGTGGACGAGAAGGTGAACCTTCTGGAGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 72 bp CCCTGCTCCAGATGCTTGATTTTCTTCTCCGTGAGCTaGTCCAGGGTGGAGTGGCAGTCGTCCATCTCTTTC +
Preference number: 6 (lower is better)
Translates to: PCSRCLIFFSVS*SRVEWQSSISF
Trigger: GAAAGAGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAAGCATCTGGAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CCA 72 bp TTTCAGCGGAGACCTCACTCTGCAACAGGGCTACACTaGCCACAGACTACCCAGACAACACGGACTGCTGAA +
Preference number: 6 (lower is better)
Translates to: FQRRPHSATGLH*PQTTQTTRTAE
Trigger: TTCAGCAGTCCGTGTTGTCTGGGTAGTCTGTGGCCAGTGTAGCCCTGTTGCAGAGTGAGGTCTCCGCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS CAA 72 bp GAGAGGGCTGCGGGGGCAATCCTACTGACGAGTTTGTaGAGAGCGCGAACTTTTTCTTCCAAGAGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: ERAAGAILLTSL*RARTFSSKRRL
Trigger: AAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CAA 72 bp ACAGAGAGGGCTGCGGGGGCAATCCTACTGACGAGTTaGTTGAGAGCGCGAACTTTTTCTTCCAAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: TERAAGAILLTS*LRARTFSSKRR
Trigger: CCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS TCA 72 bp ACCCGAGTGGAAGACTCTAGAAGTAGCGCGGGCTCATaGCTGAAGAGGCCAAGCTGGAATTCCTCAAGACTC +
Preference number: 6 (lower is better)
Translates to: TRVEDSRSSAGS*LKRPSWNSSRL
Trigger: GAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAGAGTCTTCCACTCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp CTGGTCTTGACTTTCCTCAAGGGTCTGGGTCAGCTCTaGCCATGGCAGCTGCAGGCTCTGATGTTCCTGATT +
Preference number: 6 (lower is better)
Translates to: LVLTFLKGLGQL*PWQLQALMFLI
Trigger: AATCAGGAACATCAGAGCCTGCAGCTGCCATGGTCAGAGCTGACCCAGACCCTTGAGGAAAGTCAAGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000496509.2
CDS CAA 90 bp AGAAGTTTGGTTTCCATGTCATCCTTCTCTCTCTCCAGCGCTATTTaGGTCTCCCCCTCTTCTGGGGCAGCAAGCTGCTCCTGCCAGGAA +
Preference number: 6 (lower is better)
Translates to: RSLVSMSSFSLSSAI*VSPSSGAASCSCQE
Trigger: TTCCTGGCAGGAGCAGCTTGCTGCCCCAGAAGAGGGGGAGACCAAAATAGCGCTGGAGAGAGAGAAGGATGACATGGAAACCAAACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS GCA 72 bp ACTCTGCTGCGTCCAGTGTTAGCTTCCAGTGAACCTTaGTGGGGCCTGATTCTTTTCAAACAACGACCACGC +
Preference number: 6 (lower is better)
Translates to: TLLRPVLASSEP*WGLILFKQRPR
Trigger: GCGTGGTCGTTGTTTGAAAAGAATCAGGCCCCAGCAAGGTTCACTGGAAGCTAACACTGGACGCAGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS CAA 90 bp CTTTACACAGAGAGGGCTGCGGGGGCAATCCTACTGACGAGTTTGTaGAGAGCGCGAACTTTTTCTTCCAAGAGGCGGCTTTGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: LYTERAAGAILLTSL*RARTFSSKRRLCFS
Trigger: CGAGAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS CAA 90 bp TGTCTTTACACAGAGAGGGCTGCGGGGGCAATCCTACTGACGAGTTaGTTGAGAGCGCGAACTTTTTCTTCCAAGAGGCGGCTTTGTTTC +
Preference number: 6 (lower is better)
Translates to: CLYTERAAGAILLTS*LRARTFSSKRRLCF
Trigger: GAAACAAAGCCGCCTCTTGGAAGAAAAAGTTCGCGCTCTCAACAAACTCGTCAGTAGGATTGCCCCCGCAGCCCTCTCTGTGTAAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000464285.5
CDS TCA 72 bp GAGTGGAAGACTCTAGAAGTAGCGCGGGCTCATGACTaGAGAGGCCAAGCTGGAATTCCTCAAGACTCACTT +
Preference number: 6 (lower is better)
Translates to: EWKTLEVARAHD*RGQAGIPQDSL
Trigger: AAGTGAGTCTTGAGGAATTCCAGCTTGGCCTCTTCAGTCATGAGCCCGCGCTACTTCTAGAGTCTTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS GCA 72 bp AAAGCTAAACATGAACAACAGAAGACAACAATGCCCTaGATGGTCCCTGGACACACAGAGGCGGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: KAKHEQQKTTMP*MVPGHTEAAFR
Trigger: CCTGAAGGCCGCCTCTGTGTGTCCAGGGACCATGCAGGGCATTGTTGTCTTCTGTTGTTCATGTTTAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461642.2
CDS CCA 72 bp TTGATTTTCTTCTCCGTGAGCTGCTCCAGGGTGGAGTaGCAGTCGTCCATCTCTTTCACAAACTCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LIFFSVSCSRVE*QSSISFTNSRF
Trigger: GAACCTGGAGTTTGTGAAAGAGATGGACGACTGCCACTCCACCCTGGAGCAGCTCACGGAGAAGAAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000422516.5
ENST00000461642.2
CDS GCA 72 bp CTCAATTTCCTTCCTCTGTGCATCGTGAGTACTTTCTaGAGCTTCAAGCTCTTGCCGAACCCTTCCCAGATC +
Preference number: 6 (lower is better)
Translates to: LNFLPLCIVSTF*SFKLLPNPSQI
Trigger: GATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAAATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000336104.5
ENST00000422516.5
CDS CAA 90 bp GAGGCCAAGCTGGAATTCCTCAAGACTCACTTTGCCGTCTCCGTCTaGATCCAGTTTGTTAAACAGGTCTTCGAGTTCCTCTTTCTCGAG +
Preference number: 6 (lower is better)
Translates to: EAKLEFLKTHFAVSV*IQFVKQVFEFLFLE
Trigger: CTCGAGAAAGAGGAACTCGAAGACCTGTTTAACAAACTGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCAGCTTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CAA 90 bp ACATGTTTCTCCAGAGCCCGGACGACGTCTTCCAGATGTAGAAGTTaGGTTTCCATGTCATCCTTCTCTCTCTCCAGCGCTATTTTGGTC +
Preference number: 6 (lower is better)
Translates to: TCFSRARTTSSRCRS*VSMSSFSLSSAILV
Trigger: GACCAAAATAGCGCTGGAGAGAGAGAAGGATGACATGGAAACCAAACTTCTACATCTGGAAGACGTCGTCCGGGCTCTGGAGAAACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278886.11
CDS CAA 90 bp CCTTTCGTAGTAATTTACCTTGGTCTCCAGCTGGGTCCTGAGGTCTaGGTAATGCTCCTTTACCTGCTCCATCATCAGCTCCGTTTCTAT +
Preference number: 6 (lower is better)
Translates to: PFVVIYLGLQLGPEV*VMLLYLLHHQLRFY
Trigger: ATAGAAACGGAGCTGATGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATTACTACGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp TTTCGTAGTAATTTACCTTGGTCTCCAGCTGGGTCCTaGGGTCTTGGTAATGCTCCTTTACCTGCTCCATCA +
Preference number: 6 (lower is better)
Translates to: FRSNLPWSPAGS*GLGNAPLPAPS
Trigger: TGATGGAGCAGGTAAAGGAGCATTACCAAGACCTCAGGACCCAGCTGGAGACCAAGGTAAATTACTACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS TCA 72 bp AAGGAAAGCGTGTGCTCCCGAGTATGCAGCAGCACCTaGATATTTAGAAGGAGCCCATTTCTTTGGAATTCG +
Preference number: 6 (lower is better)
Translates to: KESVCSRVCSST*IFRRSPFLWNS
Trigger: CGAATTCCAAAGAAATGGGCTCCTTCTAAATATTCAGGTGCTGCTGCATACTCGGGAGCACACGCTTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464285.5
CDS CAA 72 bp CTGGAATTCCTCAAGACTCACTTTGCCGTCTCCGTCTaGATCCAGTTTGTTAAACAGGTCTTCGAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: LEFLKTHFAVSV*IQFVKQVFEFL
Trigger: GAGGAACTCGAAGACCTGTTTAACAAACTGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5
CDS CAA 72 bp CTGTGCATCGTGAGTACTTTCTGCAGCTTCAAGCTCTaGCCGAACCCTTCCCAGATCGTTTTTCAACAAAGT +
Preference number: 6 (lower is better)
Translates to: LCIVSTFCSFKL*PNPSQIVFQQS
Trigger: ACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000336104.5
ENST00000422516.5
CDS CAA 90 bp TTCCTTCCTCTGTGCATCGTGAGTACTTTCTGCAGCTTCAAGCTCTaGCCGAACCCTTCCCAGATCGTTTTTCAACAAAGTGTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: FLPLCIVSTFCSFKL*PNPSQIVFQQSVFF
Trigger: GAAGAAAACACTTTGTTGAAAAACGATCTGGGAAGGGTTCGGCAAGAGCTTGAAGCTGCAGAAAGTACTCACGATGCACAGAGGAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278886.11
ENST00000336104.5
ENST00000422516.5
CDS TCA 72 bp TGGAATTCCTCAAGACTCACTTTGCCGTCTCCGTCTTaGTCCAGTTTGTTAAACAGGTCTTCGAGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: WNSSRLTLPSPS*SSLLNRSSSSS
Trigger: AGAGGAACTCGAAGACCTGTTTAACAAACTGGATCAAGACGGAGACGGCAAAGTGAGTCTTGAGGAATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278886.11
ENST00000422516.5