RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIN (Homo sapiens)

Ensembl gene IDs: ENSG00000100503

Ensembl transcript IDs: ENST00000324330.13, ENST00000382041.7, ENST00000382043.8, ENST00000389869.7, ENST00000453196.6, ENST00000453401.6, ENST00000463419.1, ENST00000474937.1, ENST00000476352.5, ENST00000480476.1, ENST00000485005.1, ENST00000486200.1, ENST00000486950.5, ENST00000496749.1, ENST00000530997.7, ENST00000555984.1, ENST00000673657.1, ENST00000673819.1, ENST00000673852.1, ENST00000674030.1, ENST00000674061.1

Found 1607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATC +
Preference number: 1 (lower is better)
Translates to: TIGQACCWSSCKSQA*GDGLGVAVDLRCCI
Trigger: GATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 90 bp AGTTTCCTGAGGTTGTACTCATTCCGCCGCTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCCATTAAAGACTTGAGCTTCTCGGCC +
Preference number: 1 (lower is better)
Translates to: SFLRLYSFRRSMAAW*SSTSEAIKDLSFSA
Trigger: GGCCGAGAAGCTCAAGTCTTTAATGGCCTCGGAGGTGGATGATCACCATGCGGCCATAGAGCGGCGGAATGAGTACAACCTCAGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR CCA 90 bp AATGAAAAGATGGGGGATGAGGGAGGCTGGCGACTCTCCACATGCTaGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGCAGAAAGAA +
Preference number: 1 (lower is better)
Translates to: NEKMGDEGGWRLSTC*RTRQAWVQGIQQKE
Trigger: TTCTTTCTGCTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCAGCCTCCCTCATCCCCCATCTTTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR CCA 90 bp TCCCGGGAGTGCGTGAGTTCGGCTTTGGTGTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGCCAAAGCAGCTGCTGTTCCTCATTC +
Preference number: 1 (lower is better)
Translates to: SRECVSSALVFCTMV*SLSFSCQSSCCSSF
Trigger: GAATGAGGAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAACACCAAAGCCGAACTCACGCACTCCCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CCA 90 bp GGTGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTaGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGT +
Preference number: 1 (lower is better)
Translates to: GARNPAERTMATAGH*KAPQAQYLEAKTKC
Trigger: ACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR TCA 90 bp CTATGGCCGCATGGTGATCATCCACCTCCGAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCAGATCTGACCGTAGCTTCTCTTTTT +
Preference number: 1 (lower is better)
Translates to: LWPHGDHPPPRPLKT*ASRPCPDLTVASLF
Trigger: AAAAAGAGAAGCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTCGGAGGTGGATGATCACCATGCGGCCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR CCA 90 bp CTGTGGGATTCATGGTACCTGATGGGTTTAGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCAACTGACGGACCTTCTCCCGGGAGT +
Preference number: 1 (lower is better)
Translates to: LWDSWYLMGLDVFGA*EEDWIPTDGPSPGS
Trigger: ACTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGCACCAAAAACATCTAAACCCATCAGGTACCATGAATCCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CCA 90 bp AGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCTTGTAGTACCTTTTCTGCTAACACA +
Preference number: 1 (lower is better)
Translates to: SLSTLPCARYSSSSD*SSSTWSCSTFSANT
Trigger: TGTGTTAGCAGAAAAGGTACTACAAGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR GCA 90 bp TTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTaGATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCC +
Preference number: 1 (lower is better)
Translates to: LIPTYLSLCLCVWCV*MGGCVHLSAMVRNA
Trigger: GGCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTaGTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAA +
Preference number: 1 (lower is better)
Translates to: TEAGNLLLQEVIFLL*CFLSLFSHFQSFQQ
Trigger: TTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR CCA 90 bp AAAGAGCACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTaGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTA +
Preference number: 1 (lower is better)
Translates to: KEHLIPTYLSLCLCV*CVCMGGCVHLSAMV
Trigger: TACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
3UTR TCA 90 bp CCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATaGAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: PSRNISKRTFRIIVS*KQAGCCDELGKCPA
Trigger: TGCAGGGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR GCA 90 bp CAACAACTGGGCATTTTCAACATACAAGTCCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTCACTTT +
Preference number: 1 (lower is better)
Translates to: QQLGIFNIQVLHHCV*LSVLAELFFELIHF
Trigger: AAAGTGAATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAGGACTTGTATGTTGAAAATGCCCAGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR GCA 90 bp AGCTTTCAACAACTGGGCATTTTCAACATACAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATT +
Preference number: 1 (lower is better)
Translates to: SFQQLGIFNIQVLHH*VCLSVLAELFFELI
Trigger: AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAGGACTTGTATGTTGAAAATGCCCAGTTGTTGAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR CCA 90 bp ATGTTCATCTATTTCAGTAAAGTGCACAAATATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCT +
Preference number: 1 (lower is better)
Translates to: MFIYFSKVHKYECTL*FGYDLKGGVEVNGA
Trigger: AGCGCCATTGACTTCTACACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTTACTGAAATAGATGAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR CCA 90 bp TTGAGCATGAGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTaGCATGCCAATGATTATCACAGTAAGAAATTCTTAGAATCAGAT +
Preference number: 1 (lower is better)
Translates to: LSMSGKSYLALLDLR*HANDYHSKKFLESD
Trigger: ATCTGATTCTAAGAATTTCTTACTGTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACTCATGCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CCA 90 bp TGGTTTGTTCAGTGCTTTCCCTATAGTTCAACTGCTTTAATTATGTaGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACTT +
Preference number: 1 (lower is better)
Translates to: WFVQCFPYSSTALIM*LYPFLRRPAPQMKL
Trigger: AAGTTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGCAGTTGAACTATAGGGAAAGCACTGAACAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR TCA 90 bp AAAATACTAGACCTGCAAGATCTCTTCCTATGCCTTGGAAGCCTATaGCTTCATGATCTATTCATGAAAAATATGCCGAAGGCTAAATAT +
Preference number: 1 (lower is better)
Translates to: KILDLQDLFLCLGSL*LHDLFMKNMPKAKY
Trigger: ATATTTAGCCTTCGGCATATTTTTCATGAATAGATCATGAAGTCATAGGCTTCCAAGGCATAGGAAGAGATCTTGCAGGTCTAGTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp GCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGGCT +
Preference number: 2 (lower is better)
Translates to: ALKLQKLLPGHHRTG*LLEQLQIPSMRGRA
Trigger: AGCCCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp CTCCTGCAGGTGCTGGTTTATCCTTTCTGCCTGCAGCAGCTGGCGTaGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTG +
Preference number: 2 (lower is better)
Translates to: LLQVLVYPFCLQQLA*KLQKLLPGHHRTGL
Trigger: CAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAGAAAGGATAAACCAGCACCTGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GCTGGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAACCATGGCAACTGCTaGGCACTGGAAAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: AGDSPHAGERDRPGCKESNHGNC*ALESTP
Trigger: TGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTT...GGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR-3UTR CCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp CAGTGGCTCAATCACCGTCACTTCAGGAAACTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCTTCGTCCGTAACGCTTCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: QWLNHRHFRKLLHGL*ELGQGPSSVTLPTS
Trigger: AGAGGTGGGAAGCGTTACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAAGTGACGGTGATTGAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
3UTR CAA 90 bp CCAGGCGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGCCTTGAGCTCCATCTCATGTTGCAG +
Preference number: 2 (lower is better)
Translates to: PGATLKAFPLPLKAC*SLCQSSLELHLMLQ
Trigger: CTGCAACATGAGATGGAGCTCAAGGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TTCTGTAGGAATCTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: FCRNLRALLAAPVARPVVSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...CACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAGATTCCTACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
3UTR-3UTR TCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCACGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 2 (lower is better)
Translates to: SPPGLSAAPGETALVPESRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTTGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: AASSHTISGRELHPSLLLWSPDG*VAISGA
Trigger: GGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCA...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAAGCTCCATCTCATGTTaGAGCCTCAGCTTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SPPGLSAAPGETALVPESSSISC*SLSFSC
Trigger: GCAGGAGAAGCTGAGGCTGCAACATGAGATGGAGCT...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTCTTCCACCAACTGCTaGCGGAAGTGGCTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYSSTNC*RKWLAE
Trigger: CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGA...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 2 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGCGCTGCTTTATCACACTaGACTCTAAATGTGTACATG +
Preference number: 2 (lower is better)
Translates to: GDSPHAGERDRPGCKESSAALSH*TLNVYM
Trigger: CATGTACACATTTAGAGTTCAGTGTGATAAAGCAGC...GCTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR-3UTR TCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGCLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGTCTCCTCCTCATGCCTaGAAGTGGCCTCATGATGTG +
Preference number: 2 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLSPPHA*KWPHDV
Trigger: CACATCATGAGGCCACTTGCAGGCATGAGGAGGAGA...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 2 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGCAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp ATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCAGGCTCACCAAGTGTTCGAGCTaGTTTATCACACTGAACTCT +
Preference number: 2 (lower is better)
Translates to: IQQKEPWQLLGTGKHPRLTKCSS*FITLNS
Trigger: AGAGTTCAGTGTGATAAAGCAGCTCGAACACTTGGT...GAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR CAA 90 bp ATCTGTTCAATGACCAGCTCTGCCTCAATGCTCATATTCAATGGATaGCATTCTTCAGAACCGAGCCCGTGTTCGGGCTCAATGCCACCG +
Preference number: 2 (lower is better)
Translates to: ICSMTSSASMLIFNG*HSSEPSPCSGSMPP
Trigger: CGGTGGCATTGAGCCCGAACACGGGCTCGGTTCTGAAGAATGCAATCCATTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR TCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGCTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 2 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 2 (lower is better)
Translates to: SGKSYLALLDLRWHANDYIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCATCATATTCAATGGATTaGATTCTTCAGAACCGAGCC +
Preference number: 2 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSSYSMD*ILQNRA
Trigger: GGCTCGGTTCTGAAGAATGCAATCCATTGAATATGA...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 2 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACTGGGGCCCAGCTCTTaGCACCAGCATTCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRLGPSS*HQHSEV
Trigger: AACTTCAGAATGCTGGTGGCAAGAGCTGGGCCCCAG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCAAGTTCTAAACGCTaGTTGCCTGCCTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSSSKR*LPACCR
Trigger: CCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACTTGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 2 (lower is better)
Translates to: SGKSYLALLDLRWHANDYGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATCTTCCACCAACTGCTaGCGGAAGTGGCTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSSTNC*RKWLAE
Trigger: CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTGACAGCCTTTTCTGCTaGTTATGGAGCCCTGATGGA +
Preference number: 2 (lower is better)
Translates to: AASSHTISGRELHPSLLLDSLFC*LWSPDG
Trigger: TCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCACCATCGGACAGGCTTaGTGCTGGAGCAGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: IWVCLMSAVNNHLISPASTIGQA*CWSSCK
Trigger: TTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTAAGTCTTCCACCAACTaGTGGCGGAAGTGGCTAGCA +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTKSSTN*WRKWLA
Trigger: TGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LVLKPPFPAESLVGQISSLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTTTCCCGTTCCTCCAATaGACTGTTTCCTGGCTCTTT +
Preference number: 2 (lower is better)
Translates to: AASSHTISGRELHPSLLLFPFLQ*TVSWLF
Trigger: AAAGAGCCAGGAAACAGTGCATTGGAGGAACGGGAA...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTAACTGCACCCTTCTCTaGTACTTCCAACCACTGAGT +
Preference number: 2 (lower is better)
Translates to: AASSHTISGRELHPSLLLNCTLL*YFQPLS
Trigger: ACTCAGTGGTTGGAAGTAGCAGAGAAGGGTGCAGTT...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTTTCCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: AASSHTISGRELHPSLLLFPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGGAA...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCCTCATGCCTGCAAGTaGCCTCATGATGTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHPHACK*PHDVPP
Trigger: AGGAGGCACATCATGAGGCCACTTGCAGGCATGAGG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp CTTTTCTTAACTCCTCTTTCTCAAGAGTGTGTTTCTCCACCAGGCTaGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAAGC +
Preference number: 2 (lower is better)
Translates to: LFLTPLSQECVSPPG*SAAPGETALVPESS
Trigger: GCTTGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGAAACACACTCTTGAGAAAGAGGAGTTAAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp TTCGGCTTTGGTGTTCTGTACCATGGTCTGGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTCCTCATTCATCAGATGATCCAACTT +
Preference number: 2 (lower is better)
Translates to: FGFGVLYHGLEPLIL*PKQLLFLIHQMIQL
Trigger: AAGTTGGATCATCTGATGAATGAGGAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAACACCAAAGCCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCTATTTGGCACTCCTTaGCCTCAGGTGGCATGCCAA +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHLFGTP*PQVACQ
Trigger: TTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTTCATCCAGTGGCTCAATCACCGTCACTTCAGGAAACTCCTCCACGGACTCTTCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTTA +
Preference number: 2 (lower is better)
Translates to: LHPVAQSPSLQETPPRTLLTYLG*ASSEQL
Trigger: TAACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...AAGAGTCCGTGGAGGAGTTTCCTGAAGTGACGGTGATTGAGCCACTGGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
3UTR-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTCAGAACCGAGCCCTaGAAACACATGGGACTCATT +
Preference number: 2 (lower is better)
Translates to: GKSYLALLDLRWHANDYHFRTEP*KHMGLI
Trigger: AATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTCCTCATTCATCAGATaGTCCAACTTGTCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHSSFIR*SNLSQD
Trigger: GTCCTGGGACAAGTTGGATCATCTGATGAATGAGGA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCAC +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKSSTEA*ALCLVH
Trigger: GTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: GKSYLALLDLRWHANDYHLHHCV*LSVLAE
Trigger: CTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCCAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTT +
Preference number: 2 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGQVLHH*VCLSVL
Trigger: AAGAACACTAAGGCAGACGCAATGGTGAAGGACTTG...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTCTATTTCAGTAAAGTaGACAAATATGAGTGTACCC +
Preference number: 2 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAESISVK*TNMSVP
Trigger: GGGTACACTCATATTTGTGCACTTTACTGAAATAGA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 2 (lower is better)
Translates to: AASSHTISGRELHPSLLLRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTCCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: GKSYLALLDLRWHANDYHFPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGGAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGTGCAGAGTTGTTCTTTaGGCTGATTCACTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLCRVVL*ADSLSL
Trigger: AAGAGAAAGTGAATCAGCTCAAAGAACAACTCTGCA...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 2 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTTTTCTCTGACCACCTaGTCAACTCGTTCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: SGKSYLALLDLRWHANDYFSLTT*STRSLL
Trigger: CAGAAGGGAACGAGTTGATCAGGTGGTCAGAGAAAA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR GCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 2 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LVLKPPFPAESLVGQISSSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTCGTTCTCATGCCTTTaGTTCATGTTCTCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTSFSCL*FMFSCA
Trigger: GGCACAGGAGAACATGAAGCAAAGGCATGAGAACGA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 2 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYCFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATACAGTATTGTTCCCTaGGTTCTTGAGGCAACCTCA +
Preference number: 2 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRYSIVP*VLEATS
Trigger: TGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSFSCR*VFSSSS
Trigger: GCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCT...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 2 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTGCCACATTTCTTCCTaGGATCCATTTAATGTCCCT +
Preference number: 2 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHCHISS*DPFNVP
Trigger: AGGGACATTAAATGGATCTCAGGAAGAAATGTGGCA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKRPLKT*ASRPCP
Trigger: TGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR GCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 2 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 2 (lower is better)
Translates to: GKSYLALLDLRWHANDYHFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTGCGTTTCGTTCTCATaGCTTTGCTTCATGTTCTCC +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTCVSFS*LCFMFS
Trigger: GGAGAACATGAAGCAAAGGCATGAGAACGAAACGCA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVCLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGTTCTAAACGCTGCTTaGCTGCCTGCTGCAGGATCT +
Preference number: 2 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSVLNAA*LPAAGS
Trigger: AGATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAAC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGCCTCATGCCTGCAAGTaGCCTCATGATGTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLPHACK*PHDVPP
Trigger: AGGAGGCACATCATGAGGCCACTTGCAGGCATGAGG...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp ATCTGTTCAATGACCAGCTCTGCCTCAATGCTCATATTCAATGGATaGCATTCTTCAGAACCGAGCCCTGAAAACACATGGGACTCATTG +
Preference number: 2 (lower is better)
Translates to: ICSMTSSASMLIFNG*HSSEPSPENTWDSL
Trigger: CAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGAATGCAATCCATTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTTTGCTTCATCAGTGTaGACTCCCAGTCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: LHHCVCLSVLAELFFELIFASSV*TPSPTK
Trigger: TTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATACTATTTTACAGTGCTaGGAGGTCCAGATAGGTCCA +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHTILQC*EVQIGP
Trigger: TGGACCTATCTGGACCTCTCAGCACTGTAAAATAGT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCTTCGAGCTCCAGTCTaGGGCAACATATGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLRAPV*GNICPC
Trigger: ACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTACTGCTGCTTGCCCCTaGAGTTCAGCAATTTCATTT +
Preference number: 2 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFTAACP*SSAISF
Trigger: AAATGAAATTGCTGAACTTCAGGGGCAAGCAGCAGT...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTTTAAGCTCGCACTCTaGTGTTCCCAGGATTTCTGT +
Preference number: 2 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVFKLAL*CSQDFC
Trigger: ACAGAAATCCTGGGAACATCAGAGTGCGAGCTTAAA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 2 (lower is better)
Translates to: LHHCVCLSVLAELFFELISREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCCACTGAGTTCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKPLSSP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGAACTCAGTGG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTCAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTT +
Preference number: 2 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFQVLHH*VCLSVL
Trigger: AAGAACACTAAGGCAGACGCAATGGTGAAGGACTTG...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCCCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 2 (lower is better)
Translates to: LVLKPPFPAESLVGQISSPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 2 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 2 (lower is better)
Translates to: GKSYLALLDLRWHANDYHFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACAACCATCTTCTGAACTaGAGCATTTTCTTGTTTTAC +
Preference number: 2 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYNHLLN*SIFLFY
Trigger: GTAAAACAAGAAAATGCTGCAGTTCAGAAGATGGTT...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAAGCCTGCTGCAGGATCTaGTCTCTCTCTTTTCGGAGT +
Preference number: 2 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKACCRI*SLSFRS
Trigger: ACTCCGAAAAGAGAGAGAGCAGATCCTGCAGCAGGC...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 2 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTCCTGGTTTCCCTGTaGTGTGTTGGTTTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSFLVSL*CVGFGG
Trigger: ACCTCCGAAACCAACACACCACAGGGAAACCAGGAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGTTACCAGTTGTTCCTaGTTTCCCTGTGGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKVTSCS*FPCGVL
Trigger: CAACACACCACAGGGAAACCAGGAACAACTGGTAAC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTAGAAGTCAATGGCGCTaGTGTCAGATTCCTAACTAT +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTRSQWR*CQIPNY
Trigger: ATAGTTAGGAATCTGACACCAGCGCCATTGACTTCT...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCATTCCGCCGCTCTATaGCCGCATGGTGATCATCCA +
Preference number: 2 (lower is better)
Translates to: PGIYQSELFGLLSHENKQHSAAL*PHGDHP
Trigger: TGGATGATCACCATGCGGCCATAGAGCGGCGGAATG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGATTTGGGTTTGTCTaGTGTCAGCGGTTAATAACC +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHRFGFV*CQRLIT
Trigger: GGTTATTAACCGCTGACATCAGACAAACCCAAATCT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCTATTTGGCACTCCTTaGCCTCAGGTGGCATGCCAA +
Preference number: 2 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSLFGTP*PQVACQ
Trigger: TTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGAACTCAGGGCTTTCTaGCAAGAGCTGTGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKELRAF*QELCKN
Trigger: ATTTTTGCACAGCTCTTGTCAGAAAGCCCTGAGTTC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTGCAAGTGGCCTCATaGTGTGCCTCCTTGAGCACT +
Preference number: 2 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLQVAS*CASLST
Trigger: AGTGCTCAAGGAGGCACATCATGAGGCCACTTGCAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCTGCCCATAAAGCAGTaGTTGATTTTGCTGTTCACC +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKLPIKQ*LILLFT
Trigger: GGTGAACAGCAAAATCAAGCACTGCTTTATGGGCAG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCTCCCGCTCAAAGCTTaGTTGAGCCTGTGTCAGTCT +
Preference number: 2 (lower is better)
Translates to: PGIYQSELFGLLSHENKQLPLKA*LSLCQS
Trigger: AGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATCAGATTCTCATATTCTaGCAACTTCTCTGCATTTTC +
Preference number: 2 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHQILIF*QLLCIF
Trigger: GAAAATGCAGAGAAGTTGGCAGAATATGAGAATCTG...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTCCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTFPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGGAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTTCCTGGTTTCCCTGTaGTGTGTTGGTTTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVFLVSL*CVGFGG
Trigger: ACCTCCGAAACCAACACACCACAGGGAAACCAGGAA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCGTTACCAGTTGTTCCTaGTTTCCCTGTGGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: GLLSHENKQVVVMNLESAVTSCS*FPCGVL
Trigger: CAACACACCACAGGGAAACCAGGAACAACTGGTAAC...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAACTGCTGGCGGAAGTaGCTAGCAGAGATTATAATT +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHNCWRK*LAEIII
Trigger: AATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp CTGTTCTATAAAGTTTTGATCTTGAGCATGAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACAGT +
Preference number: 2 (lower is better)
Translates to: LFYKVLILSMSGKSY*ALLDLRWHANDYHS
Trigger: ACTGTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACTCATGCTCAAGATCAAAACTTTATAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATaGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGT +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGL*SHENKQVVVMNLES
Trigger: ACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTCATTCGTTCCTCCATaGCAGTTACCAGTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: FAGLHSARCLLNSEPFPESFVPP*QLPVVP
Trigger: AGGAACAACTGGTAACTGTCATGGAGGAACGAATGA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: IWVCLMSAVNNHLISPASQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 2 (lower is better)
Translates to: FIFELQSEATYVPVMLFFFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTGTAATTTTTCTTCTCTaGTGTTTTCTGTCGCTGTTC +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTVIFLL*CFLSLF
Trigger: GAACAGCGACAGAAAACAGCAGAGAAGAAAAATTAC...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 2 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 2 (lower is better)
Translates to: PGIYQSELFGLLSHENKQLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTAGAGCTTTCAACAACTaGGCATTTTCAACATACAAG +
Preference number: 2 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTRAFNN*AFSTYK
Trigger: CTTGTATGTTGAAAATGCCCAGTTGTTGAAAGCTCT...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGATCTTGAGCATGAGTaGAAAGTCCTATTTGGCACT +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKDLEHE*KVLFGT
Trigger: AGTGCCAAATAGGACTTTCCACTCATGCTCAAGATC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGACAGCCTTTTCTGCTaGTTATGGAGCCCTGATGGA +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIDSLFC*LWSPDG
Trigger: TCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 2 (lower is better)
Translates to: LHHCVCLSVLAELFFELIDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 2 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: LHHCVCLSVLAELFFELIKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAAAAATTCAAAGGTTTaGTTCATCAGTGTGAACTCC +
Preference number: 2 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRKNSKV*FISVNS
Trigger: GGAGTTCACACTGATGAAGCAAACCTTTGAATTTTT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 2 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGGAGCACTCTGCCTTGTaGACGATATTCTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLEHSAL*TIFFQL
Trigger: GAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTC...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGAGAAGTCAATGGCGCTaGTGTCAGATTCCTAACTAT +
Preference number: 2 (lower is better)
Translates to: FAGLHSARCLLNSEPFPERSQWR*CQIPNY
Trigger: ATAGTTAGGAATCTGACACCAGCGCCATTGACTTCT...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGGCTCTTTTTCCTTCTaGCATAGCATTTCTGTTAGA +
Preference number: 2 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKGSFSF*HSISVR
Trigger: TCTAACAGAAATGCTATGCCAGAAGGAAAAAGAGCC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTGGAGTTCATCTACTTaGTCTTGTAGTACCTTTTCT +
Preference number: 2 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVWSSST*SCSTFS
Trigger: AGAAAAGGTACTACAAGACCAAGTAGATGAACTCCA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCT +
Preference number: 2 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKSSSSD*SSSTWS
Trigger: AGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTACAGTATTGTTCCCTaGGTTCTTGAGGCAACCTCA +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIYSIVP*VLEATS
Trigger: TGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTTTGCTTCATCAGTGTaGACTCCCAGTCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSFASSV*TPSPTK
Trigger: TTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCTGCCCATAAAGCAGTaGTTGATTTTGCTGTTCACC +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILPIKQ*LILLFT
Trigger: GGTGAACAGCAAAATCAAGCACTGCTTTATGGGCAG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAAATCTAAGCTTAAGTaGAGGCTTCTAAAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHKSKLK*RLLKSR
Trigger: TCTGCTTTTTAGAAGCCTGCACTTAAGCTTAGATTT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 2 (lower is better)
Translates to: GLLSHENKQVVVMNLESACFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAGGTGTAGAAGTCAATaGCGCTGGTGTCAGATTCCT +
Preference number: 2 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLRCRSQ*RWCQIP
Trigger: AGGAATCTGACACCAGCGCCATTGACTTCTACACCT...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCCTTTTGTAAATAGATaGGCTTGGCCCTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSPFVNR*AWPSRN
Trigger: ATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTCATTCGTTCCTCCATaGCAGTTACCAGTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLSFVPP*QLPVVP
Trigger: AGGAACAACTGGTAACTGTCATGGAGGAACGAATGA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGAACTCAGGGCTTTCTaGCAAGAGCTGTGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRELRAF*QELCKN
Trigger: ATTTTTGCACAGCTCTTGTCAGAAAGCCCTGAGTTC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 2 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 2 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 2 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCCTTTTGTAAATAGATaGGCTTGGCCCTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLPFVNR*AWPSRN
Trigger: ATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGAGAAGACACTAAAGTaGAGGACTGCACTTTACAAC +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIEKTLK*RTALYN
Trigger: GTTGTAAAGTGCAGTCCTCCACTTTAGTGTCTTCTC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCTATTTCAGTAAAGTaGACAAATATGAGTGTACCC +
Preference number: 2 (lower is better)
Translates to: GLLSHENKQVVVMNLESASISVK*TNMSVP
Trigger: GGGTACACTCATATTTGTGCACTTTACTGAAATAGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 2 (lower is better)
Translates to: PGIYQSELFGLLSHENKQYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGATCTTGAGCATGAGTaGAAAGTCCTATTTGGCACT +
Preference number: 2 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRDLEHE*KVLFGT
Trigger: AGTGCCAAATAGGACTTTCCACTCATGCTCAAGATC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCAAAAATTCAAAGGTTTaGTTCATCAGTGTGAACTCC +
Preference number: 2 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLKNSKV*FISVNS
Trigger: GGAGTTCACACTGATGAAGCAAACCTTTGAATTTTT...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR GCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTTACTAGAAATGTCTaGACCACAGAAGAAAGATCT +
Preference number: 2 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLTRNV*TTEERS
Trigger: AGATCTTTCTTCTGTGGTGCAGACATTTCTAGTAAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTCATCTTTGAGAAGGTaGTTTTCCTGTTGCACAATA +
Preference number: 2 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLSSLRR*FSCCTI
Trigger: TATTGTGCAACAGGAAAACCACCTTCTCAAAGATGA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp CAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGG +
Preference number: 3 (lower is better)
Translates to: QACCWSSCKSQA*GDGLGVAVDLR
Trigger: CCTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CCA 72 bp GCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: AAAGVEAAETAP*APSDRLAAGAA
Trigger: AGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCAGTCACCGGCTGGGATGTGTGAAGGCCGCGCTTCTTCATCCAGTGGCTCAACTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 3 (lower is better)
Translates to: CSHRLGCVKAALLHPVAQLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...TTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
3UTR GCA 72 bp AAGATGGGGGATGAGGGAGGCTGGCGACTCTCCACATaGTGGAGAACGAGACAGGCCTGGGTGCAAGGAATC +
Preference number: 3 (lower is better)
Translates to: KMGDEGGWRLST*WRTRQAWVQGI
Trigger: GATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCAGCCTCCCTCATCCCCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR-3UTR CAA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGCTTGAGCACTGCTGCTaGCCCCTGAAGTTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQLEHCC*PLKFSN
Trigger: ATTGCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAG...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCACACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: SPPGLSAAPGETALVPESHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp GACAGCCTTTTCTGCTGGTTATGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCCCAGCTCTTGCCACCA +
Preference number: 3 (lower is better)
Translates to: DSLFCWLWSPDG*VAISGAQLLPP
Trigger: TGGTGGCAAGAGCTGGGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp GTCCCAGGACAGCCTTTTCTGCTGGTTATGGAGCCCTaGTGGATGAGTAGCTATCTCTGGGGCCCAGCTCTT +
Preference number: 3 (lower is better)
Translates to: VPGQPFLLVMEP*WMSSYLWGPAL
Trigger: AAGAGCTGGGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTCCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp TGGATTCCAACTGACGGACCTTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCTGTACCATGGTCTGGA +
Preference number: 3 (lower is better)
Translates to: WIPTDGPSPGSA*VRLWCSVPWSG
Trigger: TCCAGACCATGGTACAGAACACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGTCCGTCAGTTGGAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGCCCAGGCTCAGTATCTaGAGGCAAAAACCAAGTGTT +
Preference number: 3 (lower is better)
Translates to: WRLSTCWRTRQAWVQGIQPRLSI*RQKPSV
Trigger: AACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGG...CTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR-3UTR CAA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRSVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGTTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp AGGTTGTACTCATTCCGCCGCTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCCATTAAAGACTTGAGC +
Preference number: 3 (lower is better)
Translates to: RLYSFRRSMAAW*SSTSEAIKDLS
Trigger: GCTCAAGTCTTTAATGGCCTCGGAGGTGGATGATCACCATGCGGCCATAGAGCGGCGGAATGAGTACAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CAA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACCCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 3 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp CATGGTGATCATCCACCTCCGAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCAGATCTGACCGTAGCT +
Preference number: 3 (lower is better)
Translates to: HGDHPPPRPLKT*ASRPCPDLTVA
Trigger: AGCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTCGGAGGTGGATGATCACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR GCA 72 bp GTGTTGGTTTCGGAGGTCCTGTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTTTCTGCCTGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: VLVSEVLFSSSS*RCWFILSACSS
Trigger: GCTGCTGCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAACAGGACCTCCGAAACCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
3UTR CCA 72 bp TGCGTGAGTTCGGCTTTGGTGTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGCCAAAGCAGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: CVSSALVFCTMV*SLSFSCQSSCC
Trigger: ACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAACACCAAAGCCGAACTCACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTTCCAGTTTCCTGAGGTaGTACTCATTCCGCCGCTCT +
Preference number: 3 (lower is better)
Translates to: AASSHTISGRELHPSLLLSSFLR*YSFRRS
Trigger: AGAGCGGCGGAATGAGTACAACCTCAGGAAACTGGA...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR CCA 72 bp AATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTaGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: NPAERTMATAGH*KAPQAQYLEAK
Trigger: TTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR-3UTR CAA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 3 (lower is better)
Translates to: AASSHTISGRELHPSLLLSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 3 (lower is better)
Translates to: SGKSYLALLDLRWHANDYFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 3 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp TCCATCTCATGTTGCAGCCTCAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGCTTCACTTGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: SISCCSLSFSCR*VFSSSSFTCSC
Trigger: ACAACTGCAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAACATGAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp CAACTTCTTCTGACGGTGAGTTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCACGATATTCTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: QLLLTVSSSTEA*ALCLVHDILPA
Trigger: AGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTCACCGTCAGAAGAAGTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR CCA 72 bp ATGGGTTTAGATGTTTTTGGTGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCTTCTCCCGGGAGTGCG +
Preference number: 3 (lower is better)
Translates to: MGLDVFGAWEED*IPTDGPSPGSA
Trigger: CGCACTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGCACCAAAAACATCTAAACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 3 (lower is better)
Translates to: SPPGLSAAPGETALVPESSVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 3 (lower is better)
Translates to: IWVCLMSAVNNHLISPASFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTC +
Preference number: 3 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTEPLIL*PKQLLF
Trigger: GAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTC...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR GCA 72 bp ACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTaGATGGGTGGGTGTGTGCATCTGTCTGCCATGGTA +
Preference number: 3 (lower is better)
Translates to: TYLSLCLCVWCV*MGGCVHLSAMV
Trigger: TACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
3UTR-3UTR CAA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCATACAGTTTCCGTTTTTaGCCACATTTCTTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: SPPGLSAAPGETALVPESYSFRF*PHFFLR
Trigger: TCTCAGGAAGAAATGTGGCAAAAAACGGAAACTGTA...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACAACACTAGAGATTTTTaGCTGGAAGTCAGAGAGATC +
Preference number: 3 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYNTRDF*LEVREI
Trigger: GATCTCTCTGACTTCCAGCAAAAAATCTCTAGTGTT...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTTTCATCCGGGACATTaGCAGGTTTACATTCTGCAC +
Preference number: 3 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHFHPGH*QVYILH
Trigger: GTGCAGAATGTAAACCTGCAAATGTCCCGGATGAAA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKCVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKHDSYQ*FLVSLW
Trigger: CCACAGGGAAACCAGGAACAACTGGTAACTGTCATG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 3 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: LHHCVCLSVLAELFFELISVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATAACACATGGGACTCATaGATCCTGCAGCAGGTTCTT +
Preference number: 3 (lower is better)
Translates to: LLFIMAHFIFELQSEATYNTWDS*ILQQVL
Trigger: AAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTT...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
3UTR-3UTR CAA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 3 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 3 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 3 (lower is better)
Translates to: FAGLHSARCLLNSEPFPECVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAGTTCTAAACGCTGCTaGCCTGCCTGCTGCAGGATC +
Preference number: 3 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVSSKRC*PACCRI
Trigger: GATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR TCA 72 bp CATATTCAATGGATTGCATTCTTCAGAACCGAGCCCTaGAAACACATGGGACTCATTGATCCTGCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: HIQWIAFFRTEP*KHMGLIDPAAG
Trigger: ACCTGCTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGAATGCAATCCATTGAATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
3UTR-3UTR CAA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTGTGTCAGTCTAGCCTaGAGCTCCATCTCATGTTGC +
Preference number: 3 (lower is better)
Translates to: FAGLHSARCLLNSEPFPECVSLA*SSISCC
Trigger: GCAACATGAGATGGAGCTCAAGGCTAGACTGACACA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTTTCATCCGGGACATTaGCAGGTTTACATTCTGCAC +
Preference number: 3 (lower is better)
Translates to: LHHCVCLSVLAELFFELIFHPGH*QVYILH
Trigger: GTGCAGAATGTAAACCTGCAAATGTCCCGGATGAAA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR GCA 72 bp GGCATTTTCAACATACAAGTCCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: GIFNIQVLHHCV*LSVLAELFFEL
Trigger: CAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAGGACTTGTATGTTGAAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR CCA 72 bp TTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTaGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCT +
Preference number: 3 (lower is better)
Translates to: LIPTYLSLCLCV*CVCMGGCVHLS
Trigger: AGACAGATGCACACACCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
3UTR CCA 72 bp TCATGGTACCTGATGGGTTTAGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCAACTGACGGACCTTCT +
Preference number: 3 (lower is better)
Translates to: SWYLMGLDVFGA*EEDWIPTDGPS
Trigger: AGAAGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGCACCAAAAACATCTAAACCCATCAGGTACCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CCA 72 bp ACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCTTGTAGTACCTTTTCT +
Preference number: 3 (lower is better)
Translates to: TLPCARYSSSSD*SSSTWSCSTFS
Trigger: AGAAAAGGTACTACAAGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHRQFTV*FPEFLR
Trigger: CCTCAAGAACTCAGGGAACAATACTGTAAACTGTCT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATCAAAAATTCAAAGGTTaGCTTCATCAGTGTGAACTC +
Preference number: 3 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHQKFKG*LHQCEL
Trigger: GAGTTCACACTGATGAAGCAAACCTTTGAATTTTTG...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 3 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp TTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTaGGGCAACATATGTCCCTGTGATGTTGTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: FHNGALYLRAPV*GNICPCDVVLS
Trigger: TGAAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR GCA 72 bp CAACTGGGCATTTTCAACATACAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTT +
Preference number: 3 (lower is better)
Translates to: QLGIFNIQVLHH*VCLSVLAELFF
Trigger: AAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAGGACTTGTATGTTGAAAATGCCCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR GCA 72 bp CCCCTTCTACTCTCCCTTCACAAATCTAAGCTTAAGTaGAGGCTTCTAAAAAGCAGAAGAGAGTACAATAGG +
Preference number: 3 (lower is better)
Translates to: PLLLSLHKSKLK*RLLKSRREYNR
Trigger: CCTATTGTACTCTCTTCTGCTTTTTAGAAGCCTGCACTTAAGCTTAGATTTGTGAAGGGAGAGTAGAAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGTTGTTGTGATGAACTaGGAAAGTGCCCTGCACCTA +
Preference number: 3 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLVVVMN*ESALHL
Trigger: TAGGTGCAGGGCACTTTCCAAGTTCATCACAACAAC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGAGGCCATTAAAGACTaGAGCTTCTCGGCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKREAIKD*SFSALS
Trigger: GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
3UTR-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTTCCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLFPCGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGGAAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRHDSYQ*FLVSLW
Trigger: CCACAGGGAAACCAGGAACAACTGGTAACTGTCATG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTTACTCCAAAGTGGTTaGTTCAGTGCTTTCCCTATA +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKLLQSG*FSAFPI
Trigger: TATAGGGAAAGCACTGAACAAACCACTTTGGAGTAA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: FAGLHSARCLLNSEPFPERQFTV*FPEFLR
Trigger: CCTCAAGAACTCAGGGAACAATACTGTAAACTGTCT...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 3 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 3 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCTTGATTCCCTTTTCTaGAAACGAAGATCCCATCTT +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKLDSLF*KRRSHL
Trigger: AAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAAG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCACGTTGATTAAGTTCTaGCAGTTTTTCCTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: IWVCLMSAVNNHLISPASTLIKF*QFFLVL
Trigger: CAAAACCAGGAAAAACTGCAAGAACTTAATCAACGT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 3 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 3 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLSVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 3 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFSVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCTGTTCTATAAAGTTTaGATCTTGAGCATGAGTGGA +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKLFYKV*ILSMSG
Trigger: TCCACTCATGCTCAAGATCAAAACTTTATAGAACAG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGAACTTTTCGGATTATaGTCTCATGAAAACAAGCAG +
Preference number: 3 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKELFGL*SHENKQ
Trigger: CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCCCATAAAGCAGTGCTaGATTTTGCTGTTCACCTTT +
Preference number: 3 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLPIKQC*ILLFTF
Trigger: AAAGGTGAACAGCAAAATCAAGCACTGCTTTATGGG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCATCTCTTCCTATGCCTaGGAAGCCTATGACTTCATG +
Preference number: 3 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSISSYA*EAYDFM
Trigger: CATGAAGTCATAGGCTTCCAAGGCATAGGAAGAGAT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAAGGTGGTTTTCCTGTaGCACAATATGGGTCTGTAT +
Preference number: 3 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLKVVFL*HNMGLY
Trigger: ATACAGACCCATATTGTGCAACAGGAAAACCACCTT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCCCATAAAGCAGTGCTaGATTTTGCTGTTCACCTTT +
Preference number: 3 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSPIKQC*ILLFTF
Trigger: AAAGGTGAACAGCAAAATCAAGCACTGCTTTATGGG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 3 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTTACTCCAAAGTGGTTaGTTCAGTGCTTTCCCTATA +
Preference number: 3 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILLQSG*FSAFPI
Trigger: TATAGGGAAAGCACTGAACAAACCACTTTGGAGTAA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTATGTCCCTGTGATGTaGTTCTTTCATCTGTTCAAT +
Preference number: 3 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFYVPVM*FFHLFN
Trigger: ATTGAACAGATGAAAGAACAACATCACAGGGACATA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGAACTTTTCGGATTATaGTCTCATGAAAACAAGCAG +
Preference number: 3 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIELFGL*SHENKQ
Trigger: CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 3 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp TATGCCTTGGAAGCCTATGACTTCATGATCTATTCATaGAAAATATGCCGAAGGCTAAATATGCAATGCATT +
Preference number: 3 (lower is better)
Translates to: YALEAYDFMIYS*KICRRLNMQCI
Trigger: AATGCATTGCATATTTAGCCTTCGGCATATTTTTCATGAATAGATCATGAAGTCATAGGCTTCCAAGGCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR TCA 72 bp AATATATCAAAGCGAACTTTTCGGATTATTGTCTCATaGAAACAAGCAGGTTGTTGTGATGAACTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: NISKRTFRIIVS*KQAGCCDELGK
Trigger: CTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCCTGCTCCGAAGCCCCTaGCTGGCACAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGLLRSP*LAQDLL
Trigger: GAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGAGCAG...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACTTTCCAGCCGCTGGCTaGCCAGCTGCTCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDFPAAG*PAAPKP
Trigger: GGGCTTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAA...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACTGTGGCAAAGGTCGGTaGGTTCCTCCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDCGKGR*VPPAPG
Trigger: CCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACA...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGCCGCCTCCAGCGCTCTaGAAAGCGAAGGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSPPPAL*KAKEDA
Trigger: AGCGTCCTCCTTCGCTTTGCAGAGCGCTGGAGGCGG...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCGCCCCAGGGACCCTGTaGCCGTCGTGTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGAPGTL*PSCQNC
Trigger: ACAGTTTTGACACGACGGGCACAGGGTCCCTGGGGC...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCGCCCCTCCAGGCTTTaGAGAGCGCTTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKRPSRL*RALSHL
Trigger: GAGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGGCGTGCACTGCTCGCTaGTCCGGTAGCAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLACTAR*SGSKAC
Trigger: ACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGC...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR CCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGTGTCTGCTGCAGCACTaGGGCCACCTCCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQCLLQH*GHLLQA
Trigger: AGCTTGGAGGAGGTGGCCCCAGTGCTGCAGCAGACA...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGTCTTTCCAGCCGCTaGCTGGCCAGCTGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDSLSSR*LASCSE
Trigger: TTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAAGACT...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGGCCTCATGCTGGTCCTaGTCCACCTCATCCATCCCA +
Preference number: 4 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQASCWS*STSSIP
Trigger: TGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGC...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGCCTCATGCTGGTCCTaGTCCACCTCATCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSASCWS*STSSIP
Trigger: TGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGC...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGCCCCAGGGACCCTGTaGCCGTCGTGTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRAPGTL*PSCQNC
Trigger: ACAGTTTTGACACGACGGGCACAGGGTCCCTGGGGC...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCACCTTCTCCCGGGAGTaGGTGAGTTCGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSTFSRE*VSSALV
Trigger: CACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGT...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTGGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCTGTCTGCTGCAGCACTaGGGCCACCTCCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: AGDSPHAGERDRPGCKESCLLQH*GHLLQA
Trigger: AGCTTGGAGGAGGTGGCCCCAGTGCTGCAGCAGACA...GGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTTTCCAGCCGCTGGCTaGCCAGCTGCTCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEFPAAG*PAAPKP
Trigger: GGGCTTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPSSTEA*ALCLVH
Trigger: GTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGA...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRSPGSA*VRLWCS
Trigger: AGAACACCAAAGCCGAACTCACGCACTCCCGGGAGA...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGCGCTGCTTGCCTGCCTaGTGCAGGATCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRRCLPA*CRICSL
Trigger: GAGAGAGCAGATCCTGCAGCAGGCAGGCAAGCAGCG...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACCATCGGACAGGCTTaGTGCTGGAGCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRTIGQA*CWSSCK
Trigger: TTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCACCATCGGACAGGCTTaGTGCTGGAGCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSTIGQA*CWSSCK
Trigger: TTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKSSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCTCTTCCACCAACTGCTaGCGGAAGTGGCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPSSTNC*RKWLAE
Trigger: CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGA...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGCCGACTCTCCACATGCTaGAGAACGAGACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GDSPHAGERDRPGCKESSRLSTC*RTRQAW
Trigger: CCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCG...GCTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCCTTCGAGCTCCAGTCTaGGGCAACATATGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGLRAPV*GNICPC
Trigger: ACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAG...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGCTTCGAGCTCCAGTCTaGGGCAACATATGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSLRAPV*GNICPC
Trigger: ACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAG...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTTCGAGCTCCAGTCTaGGGCAACATATGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKLRAPV*GNICPC
Trigger: ACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGCCTCCTTTTCCTGCTaGGTCACTCGTAGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSASFSC*VTRRSD
Trigger: ATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGC...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGTCTTCCAGTGCTCACTaGAGTCACCGGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRSSSAH*SHRLGC
Trigger: ACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAGA...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRPGCSQ*PLPARC
Trigger: ACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGG...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTCTCCTCCTCATGCCTaGAAGTGGCCTCATGATGTG +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRSPPHA*KWPHDV
Trigger: CACATCATGAGGCCACTTGCAGGCATGAGGAGGAGA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCCTCCCGCTCAAAGCTTaGTTGAGCCTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSLPLKA*LSLCQS
Trigger: AGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAG...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGACCATCGGACAGGCTTaGTGCTGGAGCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRTIGQA*CWSSCK
Trigger: TTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGAGGTCACTTAGGACATaGCGCCTGGTCACACCTTCT +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRRSLRT*RLVTPS
Trigger: AGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCCTTCTGTAGGAATCTaGGTGCACTGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLPSVGI*VHCSLL
Trigger: GAGCAGCGAGCAGTGCACGCAGATTCCTACAGAAGG...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR GCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGAAGTCTTCCACCAACTaGTGGCGGAAGTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRKSSTN*WRKWLA
Trigger: TGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGCTCTCCACAGATGCATaGCCCATCCCATCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRLSTDA*PIPSSR
Trigger: CCTGGATGATGGGATGGGCCATGCATCTGTGGAGAG...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGCCTCATGCCTGCAAGTaGCCTCATGATGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRPHACK*PHDVPP
Trigger: AGGAGGCACATCATGAGGCCACTTGCAGGCATGAGG...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGATGAGTAGCTATCTCTaGGGCCCAGCTCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRMSSYL*GPALAT
Trigger: GGTGGCAAGAGCTGGGCCCCAGAGATAGCTACTCAT...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTTCCAGCCGCTGGCTaGCCAGCTGCTCCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCFPAAG*PAAPKP
Trigger: GGGCTTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGTGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHECQTAP*VGPHAG
Trigger: ACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACA...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGTGGCAAAGGTCGGTaGGTTCCTCCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCCGKGR*VPPAPG
Trigger: CCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGCTGGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GWRLSTCWRTRQAWVQGIPKRLS*SNVCCS
Trigger: GCTGCAGCAGACATTACTTCAGGACAACCTCTTGGG...GATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp AGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCAGACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RNPAERTMATAGHWKAPQTGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...CTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp CTCGGGCAAGGACCTTCGTCCGTAACGCTTCCCACCTCTAACATATTTGGGCTGACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LGQGPSSVTLPTSNIFGLTGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...CAGCCCAAATATGTTAGAGGTGGGAAGCGTTACGGACGAAGGTCCTTGCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEFFRFR*PSRVIP
Trigger: GGGGATCACCCGTGATGGTCACCTGAACCGGAAGAA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGTGTTTCCATCGAGGCTaGAATCCAAGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSCFHRG*NPRPSG
Trigger: TCCTGAAGGCCTTGGATTTCAGCCTCGATGGAAACA...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEARAAW*MLFLVT
Trigger: GGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAACTGCTCTAGTTCCTaGGTCAAGCCTCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPNCSSS*VKPLTF
Trigger: GAAGGTGAGAGGCTTGACTCAGGAACTAGAGCAGTT...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACACCACTCTGAAGCATTaGGAGAGGAGATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDTTLKH*ERRCCL
Trigger: CAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGT...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCACCTGGCAACCACTCTaGAGCATTGAGAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSTWQPL*SIERGD
Trigger: ATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGT...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTTCACTGCCTGTTCATaGGCTCTCTGCAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRFTACS*ALCRLK
Trigger: CTTAAGCCTGCAGAGAGCTCATGAACAGGCAGTGAA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGTCTTCCAGTGCTCACTaGAGTCACCGGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHESSSAH*SHRLGC
Trigger: ACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAGA...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCACGTTGCGTCTTCCAGTaGTCACTGCAGTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSRCVFQ*SLQSPA
Trigger: AGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACG...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPSMPSS*QVSSIL
Trigger: GAGAATACTGGACACCTGGCAGGAAGAGGGCATTGA...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGGTTCTAAACGCTGCTTaGCTGCCTGCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRVLNAA*LPAAGS
Trigger: AGATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAAC...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTCAAGTTCTAAACGCTaGTTGCCTGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRSSSKR*LPACCR
Trigger: CCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACTTGA...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCGAGCACTCTGCCTTGTaGACGATATTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPEHSAL*TIFFQL
Trigger: GAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTC...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCGAGCACTCTGCCTTGTaGACGATATTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSEHSAL*TIFFQL
Trigger: GAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTC...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGCTCCCGCTCAAAGCTTaGTTGAGCCTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRLPLKA*LSLCQS
Trigger: AGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAG...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTCCCGCTCAAAGCTTaGTTGAGCCTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLLPLKA*LSLCQS
Trigger: AGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAG...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCAGGACAGCCTTTTCTaGTGGTTATGGAGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKQDSLF*WLWSPD
Trigger: ATCAGGGCTCCATAACCAGCAGAAAAGGCTGTCCTG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCGGCTCTTTCTCGATCTaGTGTCTCACAGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPGSFSI*CLTGRF
Trigger: AAAGCGACCTGTGAGACAGCAGATCGAGAAAGAGCC...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp CTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGTGTTGGTTTCGGGCAGTGGACCTCAGGTaGTGCATCTTCACACACTAT +
Preference number: 4 (lower is better)
Translates to: LRALLAAPVARPVVCWFRAVDLR*CIFTHY
Trigger: ATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGC...CCGAAACCAACACACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR GCA 90 bp ATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCAGGCTCTGGCGACTCTCCACATaGTGGAGAACGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: IQQKEPWQLLGTGKHPRLWRLST*WRTRQA
Trigger: GGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCA...GAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp TGGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: WRLSTCWRTRQAWVQGIQSSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...CTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRSSIQS*GGEDPL
Trigger: GAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTTCCTGGTTTCCCTGTaGTGTGTTGGTTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSFLVSL*CVGFGG
Trigger: ACCTCCGAAACCAACACACCACAGGGAAACCAGGAA...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACGGGGATGAGGGAGGCTaGCGACTCTCCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: VQGIQQKEPWQLLGTGKHGDEGG*RLSTCW
Trigger: CCAGCATGTGGAGAGTCGCCAGCCTCCCTCATCCCC...GTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCATGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSCQTAP*VGPHAG
Trigger: ACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACA...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGCCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEPKRLS*SNVCCS
Trigger: GCTGCAGCAGACATTACTTCAGGACAACCTCTTGGG...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCTGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SPPGLSAAPGETALVPESTGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCGGAAGATCCACTCTGTaGAGCATTCAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGGRSTL*SIQVIW
Trigger: CCAGATGACTTGAATGCTTCACAGAGTGGATCTTCC...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTGTTTCCATCGAGGCTaGAATCCAAGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLCFHRG*NPRPSG
Trigger: TCCTGAAGGCCTTGGATTTCAGCCTCGATGGAAACA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTTTCTCTGACCACCTaGTCAACTCGTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGFSLTT*STRSLL
Trigger: CAGAAGGGAACGAGTTGATCAGGTGGTCAGAGAAAA...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR TCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACACATGGGACTCATTaGTCCTGCAGCAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRTHGTH*SCSRFF
Trigger: AAAGAACCTGCTGCAGGATCAATGAGTCCCATGTGT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS-3UTR GCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGTACTCCTCACTGCGTTaGGTCTTCCAGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEYSSLR*VFQCSL
Trigger: CAGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTA...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGTACTCCTCACTGCGTTaGGTCTTCCAGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRYSSLR*VFQCSL
Trigger: CAGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTA...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCTATTCTCTCCACAGATaGATGGCCCATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPYSLHR*MAHPII
Trigger: GATGATGGGATGGGCCATGCATCTGTGGAGAGAATA...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTATTCTCTCCACAGATaGATGGCCCATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRYSLHR*MAHPII
Trigger: GATGATGGGATGGGCCATGCATCTGTGGAGAGAATA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTTCCCGTTCCTCCAATaGACTGTTTCCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSFPFLQ*TVSWLF
Trigger: AAAGAGCCAGGAAACAGTGCATTGGAGGAACGGGAA...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGTGTTGGTTTCGGAACTGCACCCTTCTCTaGTACTTCCAACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LRALLAAPVARPVVCWFRNCTLL*YFQPLS
Trigger: ACTCAGTGGTTGGAAGTAGCAGAGAAGGGTGCAGTT...CCGAAACCAACACACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR GCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGGCAGTGGACCTCAGGTaGTGCATCTTCACACACTAT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRAVDLR*CIFTHY
Trigger: ATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGC...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGCAGTGGACCTCAGGTaGTGCATCTTCACACACTAT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRAVDLR*CIFTHY
Trigger: ATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGC...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKLHHCV*LSVLAE
Trigger: CTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGCATCTCCAAAAGCTCACTaGAGTCACCGGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: ATLHMLENETGLGARNPASPKAH*SHRLGC
Trigger: ACATCCCAGCCGGTGACTGCAGTGAGCTTTTGGAGA...TGCTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAGTCGGGCCTCATGCTaGTCCTGCTCCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSRASC*SCSTSS
Trigger: GGATGAGGTGGAGCAGGACCAGCATGAGGCCCGACT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGTCTGCTGCAGCACTaGGGCCACCTCCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCCLLQH*GHLLQA
Trigger: AGCTTGGAGGAGGTGGCCCCAGTGCTGCAGCAGACA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CTTCAGGAAACTCCTCCACGGACTCTTGGAACTCGGGCAAGGACCTTCGTCCGTTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: LQETPPRTLGTRARTFVRSSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...ACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR CCA 90 bp CTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGTGTTGGTTTCGGTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LRALLAAPVARPVVCWFRFCTMV*SLSFSC
Trigger: GCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAA...CCGAAACCAACACACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR CCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKFCTMV*SLSFSC
Trigger: GCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAA...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGTGTTGGTTTCGGGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCT +
Preference number: 4 (lower is better)
Translates to: LRALLAAPVARPVVCWFRAWEED*IPTDGP
Trigger: AGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGC...CCGAAACCAACACACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR CCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTTCCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSFPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGGAA...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGAGGCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRRPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGCCT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR CCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGTGTAGAAGTCAATaGCGCTGGTGTCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDRCRSQ*RWCQIP
Trigger: AGGAATCTGACACCAGCGCCATTGACTTCTACACCT...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGAGGTGTAGAAGTCAATaGCGCTGGTGTCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSRCRSQ*RWCQIP
Trigger: AGGAATCTGACACCAGCGCCATTGACTTCTACACCT...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSLTYLG*ASSEQS
Trigger: AGACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: SPPGLSAAPGETALVPESARAAW*MLFLVT
Trigger: GGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGC...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGCTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCAAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSSFSCR*VFSSSS
Trigger: GCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCT...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCWSPDG*VAISGA
Trigger: GGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGGAACTCAGGGCTTTCTaGCAAGAGCTGTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKELRAF*QELCKN
Trigger: ATTTTTGCACAGCTCTTGTCAGAAAGCCCTGAGTTC...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTTCAGAACCGAGCCCTaGAAACACATGGGACTCATT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLFRTEP*KHMGLI
Trigger: AATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGTTCTAAACGCTGCTTaGCTGCCTGCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEVLNAA*LPAAGS
Trigger: AGATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAAC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCTGCGTTTCGTTCTCATaGCTTTGCTTCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPCVSFS*LCFMFS
Trigger: GGAGAACATGAAGCAAAGGCATGAGAACGAAACGCA...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TTCTGTAGGAATCTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FCRNLRALLAAPVARPVVSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...CACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAGATTCCTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTCCGCCTCCAGCGCTCTaGAAAGCGAAGGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLPPPAL*KAKEDA
Trigger: AGCGTCCTCCTTCGCTTTGCAGAGCGCTGGAGGCGG...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCTGCCCATAAAGCAGTaGTTGATTTTGCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPLPIKQ*LILLFT
Trigger: GGTGAACAGCAAAATCAAGCACTGCTTTATGGGCAG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGCTGCCCATAAAGCAGTaGTTGATTTTGCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSLPIKQ*LILLFT
Trigger: GGTGAACAGCAAAATCAAGCACTGCTTTATGGGCAG...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGTTGCTGATGAGGTTGTaGTACGTCGTCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRLLMRL*YVVHSH
Trigger: ATGAGAGTGGACGACGTACCACAACCTCATCAGCAA...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGAGACCCGAAAGCCAATaGTACTTGTCATTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRRPESQ*YLSLLM
Trigger: CATCAGCAATGACAAGTACCATTGGCTTTCGGGTCT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGCCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEAFRIS*LFSMPS
Trigger: AGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRSSSSD*SSSTWS
Trigger: AGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLAWEED*IPTDGP
Trigger: AGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGC...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTTCCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLFPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGGAA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCCCATGGCTAGAAGCTTaGACATCATTTCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSPWLEA*TSFPAF
Trigger: AAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGG...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGCCAGGTTCTCTAAACTaGCTTCCCATAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRPGSLN*LPISSS
Trigger: ACTGCTGCTTATGGGAAGCCAGTTTAGAGAACCTGG...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCCTTTTGTAAATAGATaGGCTTGGCCCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPPFVNR*AWPSRN
Trigger: ATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGCTGCGCAACTGCTGGGCACTaGAAAGCACCCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WKAPQAQYLEAKTKCSSCATAGH*KAPQAQ
Trigger: CTGAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGC...GCAGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR CAA 72 bp TGCCTTGTCAAGGCTCTTGTAGTGAGGCCTCCTGGGTaGACCGGTGAGACTCATAAGCCCCCAAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: CLVKALVVRPPG*TGETHKPPRNP
Trigger: AGGGTTTCTTGGGGGCTTATGAGTCTCACCGGTCAACCCAGGAGGCCTCACTACAAGAGCCTTGACAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTGTGGCAAAGGTCGGTaGGTTCCTCCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHCGKGR*VPPAPG
Trigger: CCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYARAAW*MLFLVT
Trigger: GGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGC...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGTTTTCTCTGACCACCTaGTCAACTCGTTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSFSLTT*STRSNK
Trigger: TTTGTTGGAACGAGTTGATCAGGTGGTCAGAGAAAA...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSSTEA*ALCLVH
Trigger: GTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGACTGCTGCTTGCCCCTaGAGTTCAGCAATTTCATTT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLTAACP*SSAISF
Trigger: AAATGAAATTGCTGAACTTCAGGGGCAAGCAGCAGT...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTTTAAGCTCGCACTCTaGTGTTCCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRFKLAL*CSQDFC
Trigger: ACAGAAATCCTGGGAACATCAGAGTGCGAGCTTAAA...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTTTAAGCTCGCACTCTaGTGTTCCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLFKLAL*CSQDFC
Trigger: ACAGAAATCCTGGGAACATCAGAGTGCGAGCTTAAA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTTCACTGCCTGTTCATaGGCTCTCTGCAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEFTACS*ALCRLK
Trigger: CTTAAGCCTGCAGAGAGCTCATGAACAGGCAGTGAA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGCCACTGAGTTCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEPLSSP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGAACTCAGTGG...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTTTGCTTCATCAGTGTaGACTCCCAGTCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLFASSV*TPSPTK
Trigger: TTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTGCCTTGGAAGCCTATaGCTTCATGATCTATTCATG +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGCLGSL*LHDLFM
Trigger: CATGAATAGATCATGAAGTCATAGGCTTCCAAGGCA...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGTGCCTTGGAAGCCTATaGCTTCATGATCTATTCATG +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKCLGSL*LHDLFM
Trigger: CATGAATAGATCATGAAGTCATAGGCTTCCAAGGCA...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCACTTAGCCTTGCCTTaGCTGGAAATACCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPHLALP*LEIPLR
Trigger: TCTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSVSSS*PRDPVP
Trigger: GGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCPGCSQ*PLPARC
Trigger: ACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCACTCGTTCCAACAAATaGCGGATTTCAGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGTRSNK*RISALK
Trigger: CTTTAAGGCTGAAATCCGGCATTTGTTGGAACGAGT...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCAGGATTTCTGTTCCTaGTTCATCGTCGCAATTCTA +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKQDFCS*FIVAIL
Trigger: TAGAATTGCGACGATGAAGCAGGAACAGAAATCCTG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGCAGGACAGCCTTTTCTaGTGGTTATGGAGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEQDSLF*WLWSPD
Trigger: ATCAGGGCTCCATAACCAGCAGAAAAGGCTGTCCTG...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCACAGGACAGCCTTTTCTaGTGGTTATGGAGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSQDSLF*WLWSPD
Trigger: ATCAGGGCTCCATAACCAGCAGAAAAGGCTGTCCTG...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGTGTTGGTTTCGGTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: LRALLAAPVARPVVCWFRFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...CCGAAACCAACACACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR GCA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCGTCTCTCGACGACCATaGTGTTCAAATGTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSVSRRP*CSNVLC
Trigger: ACAAAGAACATTTGAACAGCATGGTCGTCGAGAGAC...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCCTTCTGTAGGAATCTaGGTGCACTGCTCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCPSVGI*VHCSLL
Trigger: GAGCAGCGAGCAGTGCACGCAGATTCCTACAGAAGG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGGATGAACTTGGAAAGTaGCCTGCACCTAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLDELGK*PAPSKS
Trigger: AGACTTACTAGGTGCAGGGCACTTTCCAAGTTCATC...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCATTCCGCCGCTCTATaGCCGCATGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCHSAAL*PHGDHP
Trigger: TGGATGATCACCATGCGGCCATAGAGCGGCGGAATG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGAGAAGACACTAAAGTaGAGGACTGCACTTTACAAC +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSEKTLK*RTALYN
Trigger: GTTGTAAAGTGCAGTCCTCCACTTTAGTGTCTTCTC...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCGAGAAGACACTAAAGTaGAGGACTGCACTTTACAAC +
Preference number: 4 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPEKTLK*RTALYN
Trigger: GTTGTAAAGTGCAGTCCTCCACTTTAGTGTCTTCTC...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCATGAGTAGCTATCTCTaGGGCCCAGCTCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCMSSYL*GPALAT
Trigger: GGTGGCAAGAGCTGGGCCCCAGAGATAGCTACTCAT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEFCTMV*SLSFSC
Trigger: GCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAA...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTTACCAGTTGTTCCTaGTTTCCCTGTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEVTSCS*FPCGVL
Trigger: CAACACACCACAGGGAAACCAGGAACAACTGGTAAC...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCCGAAGCCCCTGCCTaGCACAGGACCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSEAPA*HRTSSR
Trigger: GCGTGAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGAGAAGTCAATGGCGCTaGTGTCAGATTCCTAACTAT +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKRSQWR*CQIPNY
Trigger: ATAGTTAGGAATCTGACACCAGCGCCATTGACTTCT...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGAACTGCTGGCGGAAGTaGCTAGCAGAGATTATAATT +
Preference number: 4 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQNCWRK*LAEIII
Trigger: AATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTT...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCAACCATGGCAACTGCTaGGCACTGGAAAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: CKESSRKNHGNCWALESTNHGNC*ALESTP
Trigger: TGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTT...GGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp GTGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACAGAACGAGACAGGCCTaGGTGCAAGGAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQGIQQKEPWQLLGTGKHRTRQA*VQGIQQ
Trigger: CTGCTGGATTCCTTGCACCCAGGCCTGTCTCGTTCT...GTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
3UTR CAA 72 bp AATCACCGTCACTTCAGGAAACTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCTTCGTCCGTAACGCTT +
Preference number: 4 (lower is better)
Translates to: NHRHFRKLLHGL*ELGQGPSSVTL
Trigger: AAGCGTTACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAAGTGACGGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCPKRLS*SNVCCS
Trigger: GCTGCAGCAGACATTACTTCAGGACAACCTCTTGGG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCACTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGCTGCAAGTGGCCTCATaGTGTGCCTCCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLLQVAS*CASLST
Trigger: AGTGCTCAAGGAGGCACATCATGAGGCCACTTGCAG...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTCCTCATTCATCAGATaGTCCAACTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAESSFIR*SNLSQD
Trigger: GTCCTGGGACAAGTTGGATCATCTGATGAATGAGGA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCAACTGGGCTTCTATTTaGGAGGTTCTTCTATTACAC +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGNWASI*EVLLLH
Trigger: GTGTAATAGAAGAACCTCTCAAATAGAAGCCCAGTT...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGAGAAAAACCCTCTACTaGAGCTTCAGACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRRKTLY*SFRLLY
Trigger: ATAGAGGAGTCTGAAGCTTCAGTAGAGGGTTTTTCT...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTCTCAGCTCTTCCTaGAGGCAGTCATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEILSSS*RQSFSR
Trigger: CCGAGAAAATGACTGCCTTCAGGAAGAGCTGAGAAT...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGAATGGGGACCCGCGTaGGCGTCATTTCCATATGTA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCEWGPA*ASFPYV
Trigger: TACATATGGAAATGACGCTCACGCGGGTCCCCATTC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGGAACTCAGGGCTTTCTaGCAAGAGCTGTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRELRAF*QELCKN
Trigger: ATTTTTGCACAGCTCTTGTCAGAAAGCCCTGAGTTC...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGAGAGTACAATAGGATaGGAGAGGTGGGTTTTACTA +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRESTIG*ERWVLL
Trigger: TAGTAAAACCCACCTCTCTCATCCTATTGTACTCTC...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGGAGAGTACAATAGGATaGGAGAGGTGGGTTTTACTA +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLESTIG*ERWVLL
Trigger: TAGTAAAACCCACCTCTCTCATCCTATTGTACTCTC...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGCACTTAGCCTTGCCTTaGCTGGAAATACCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRHLALP*LEIPLR
Trigger: TCTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTG...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYPGCSQ*PLPARC
Trigger: ACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGG...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGCCTGCTGCAGGATCTaGTCTCTCTCTTTTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCACCRI*SLSFRS
Trigger: ACTCCGAAAAGAGAGAGAGCAGATCCTGCAGCAGGC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAGCTCCATCTCATGTTaGAGCCTCAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSSISC*SLSFSC
Trigger: GCAGGAGAAGCTGAGGCTGCAACATGAGATGGAGCT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCCGCCTCCAGCGCTCTaGAAAGCGAAGGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGPPPAL*KAKEDA
Trigger: AGCGTCCTCCTTCGCTTTGCAGAGCGCTGGAGGCGG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCGTGCACTGCTCGCTaGTCCGGTAGCAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGACTAR*SGSKAC
Trigger: ACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCCGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: QGIQQKEPWQLLGTGKHPRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...GGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp GTGGCTCAATCACCGTCACTTCAGGAAACTCCTCCACGGACTCTTGGAACTCGGCGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: VAQSPSLQETPPRTLGTRRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...CCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAAGTGACGGTGATTGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR CCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACATTTTTCTTGCTCTGTaGGATTCATGGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDIFLAL*DSWYLM
Trigger: CATCAGGTACCATGAATCCCACAGAGCAAGAAAAAT...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAGGTCTTCCAGGTCTTaGAGTAGCTGCTGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCRSSRS*SSCCLS
Trigger: CGAGAGACAGCAGCTACTCCAAGACCTGGAAGACCT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGTGTGAATGTTCTCCATaGCTAGAAGCTTGGACATCA +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRCECSP*LEAWTS
Trigger: TGATGTCCAAGCTTCTAGCCATGGAGAACATTCACA...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGACAACAGCTTATATTTaGGAGAAGCCTCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRTTAYI*EKPQGF
Trigger: GAATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGT...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTTGATTCTGTACTCTTaGCCTTTCTTGATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRLILYS*PFLMCL
Trigger: CAGACACATCAAGAAAGGCCAAGAGTACAGAATCAA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGAGGTGTAGAAGTCAATaGCGCTGGTGTCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAERCRSQ*RWCQIP
Trigger: AGGAATCTGACACCAGCGCCATTGACTTCTACACCT...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTATTTACTCCAAAGTaGTTTGTTCAGTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKLFTPK*FVQCFP
Trigger: GGGAAAGCACTGAACAAACCACTTTGGAGTAAATAG...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGGATCTTGAGCATGAGTaGAAAGTCCTATTTGGCACT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRDLEHE*KVLFGT
Trigger: AGTGCCAAATAGGACTTTCCACTCATGCTCAAGATC...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACCCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYPKRLS*SNVCCS
Trigger: GCTGCAGCAGACATTACTTCAGGACAACCTCTTGGG...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAELTYLG*ASSEQS
Trigger: AGACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYTGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEASLFL*PPDQLV
Trigger: AACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SPPGLSAAPGETALVPESRPLKT*ASRPCP
Trigger: TGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCT...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSMAAW*SSTSEA
Trigger: GGCCTCGGAGGTGGATGATCACCATGCGGCCATAGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTSMAAW*SSTSEA
Trigger: GGCCTCGGAGGTGGATGATCACCATGCGGCCATAGA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGCAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAACTGCTCTAGTTCCTaGGTCAAGCCTCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCNCSSS*VKPLTF
Trigger: GAAGGTGAGAGGCTTGACTCAGGAACTAGAGCAGTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGTTGCCACCAGCATTCTaGAGTTGCTTATGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHELPPAF*SCLCKD
Trigger: GTCTTTACATAAGCAACTTCAGAATGCTGGTGGCAA...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHSPGSA*VRLWCS
Trigger: AGAACACCAAAGCCGAACTCACGCACTCCCGGGAGA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACGAATGGGGACCCGCGTaGGCGTCATTTCCATATGTA +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYEWGPA*ASFPYV
Trigger: TACATATGGAAATGACGCTCACGCGGGTCCCCATTC...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCCCAGGCTCAGTATCTTaGGGCAAAAACCAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QGIQQKEPWQLLGTGKHPPGSVS*GKNQVF
Trigger: GAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGG...GGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCGTTGCGTCTTCCAGTaGTCACTGCAGTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHRCVFQ*SLQSPA
Trigger: AGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSMPSS*QVSSIL
Trigger: GAGAATACTGGACACCTGGCAGGAAGAGGGCATTGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCGCTGCTTGCCTGCCTaGTGCAGGATCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRCLPA*CRICSL
Trigger: GAGAGAGCAGATCCTGCAGCAGGCAGGCAAGCAGCG...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACCAGATTCTCATATTCTaGCAACTTCTCTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDQILIF*QLLCIF
Trigger: GAAAATGCAGAGAAGTTGGCAGAATATGAGAATCTG...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTCTGGGGCCCAGCTCTTaGCACCAGCATTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLLGPSS*HQHSEV
Trigger: AACTTCAGAATGCTGGTGGCAAGAGCTGGGCCCCAG...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCAGGACAGCCTTTTCTaGTGGTTATGGAGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCQDSLF*WLWSPD
Trigger: ATCAGGGCTCCATAACCAGCAGAAAAGGCTGTCCTG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCGCCCCTCCAGGCTTTaGAGAGCGCTTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRPSRL*RALSHL
Trigger: GAGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTTTTGCTGTAAAAACTaGTCTGTTTGTTCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRFCCKN*SVCSAV
Trigger: TACTGCGGAACAAACAGAGCAGTTTTTACAGCAAAA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGCAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEQVLHH*VCLSVL
Trigger: AAGAACACTAAGGCAGACGCAATGGTGAAGGACTTG...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACGTAATTTTTCTTCTCTaGTGTTTTCTGTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDVIFLL*CFLSLF
Trigger: GAACAGCGACAGAAAACAGCAGAGAAGAAAAATTAC...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGGCGACTCTCCACATGCTGGAGAACGAGACAGGCCTGGGTGCAAGGAATCCAGACCAAGTGTTCGAGCTaGTTTATCACACTGAACTCT +
Preference number: 4 (lower is better)
Translates to: WRLSTCWRTRQAWVQGIQTKCSS*FITLNS
Trigger: AGAGTTCAGTGTGATAAAGCAGCTCGAACACTTGGT...CTGGATTCCTTGCACCCAGGCCTGTCTCGTTCTCCAGCATGTGGAGAGTCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCACATACTGCTCACAGATaGAGACCAGCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: SPPGLSAAPGETALVPESHTAHR*RPASSG
Trigger: ACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATG...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGCTCTTTTTCCTTCTaGCATAGCATTTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRGSFSF*HSISVR
Trigger: TCTAACAGAAATGCTATGCCAGAAGGAAAAAGAGCC...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGATTTTTCTTGCTCTGTaGGATTCATGGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRIFLAL*DSWYLM
Trigger: CATCAGGTACCATGAATCCCACAGAGCAAGAAAAAT...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAGGCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCRPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGCCT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGAGAGCTTTCAACAACTaGGCATTTTCAACATACAAG +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSRAFNN*AFSTYK
Trigger: CTTGTATGTTGAAAATGCCCAGTTGTTGAAAGCTCT...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGGCCACCCGGAGCTCTaGACGCCGGGGAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQGHPEL*TPGRKG
Trigger: GCCCTTCCTCCCCGGCGTCCAGAGCTCCGGGTGGCC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530997.7
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTGTGGCAAAGGTCGGTaGGTTCCTCCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKCGKGR*VPPAPG
Trigger: CCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFFRFR*PSRVIP
Trigger: GGGGATCACCCGTGATGGTCACCTGAACCGGAAGAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGARAAW*MLFLVT
Trigger: GGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCATTTTCTCTGACCACCTaGTCAACTCGTTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSFSLTT*STRSNK
Trigger: TTTGTTGGAACGAGTTGATCAGGTGGTCAGAGAAAA...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSMAAW*SSTSEA
Trigger: GGCCTCGGAGGTGGATGATCACCATGCGGCCATAGA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLSFSCR*VFSSSS
Trigger: GCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCT...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GAGTTCTTCAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCAACTGCTCTAGTTCCTaGGTCAAGCCTCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: EFFNGSLSTLPCARYSSSNCSSS*VKPLTF
Trigger: GAAGGTGAGAGGCTTGACTCAGGAACTAGAGCAGTT...GCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR TCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTTGCCACCAGCATTCTaGAGTTGCTTATGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAELPPAF*SCLCKD
Trigger: GTCTTTACATAAGCAACTTCAGAATGCTGGTGGCAA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTWSPDG*VAISGA
Trigger: GGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYSPGSA*VRLWCS
Trigger: AGAACACCAAAGCCGAACTCACGCACTCCCGGGAGA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCACAGGTCGCTTTGTaGATGTTCTCCATGGCTAGA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSQVAL*MFSMAR
Trigger: TCTAGCCATGGAGAACATTCACAAAGCGACCTGTGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCATTCTCAGCTCTTCCTaGAGGCAGTCATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCILSSS*RQSFSR
Trigger: CCGAGAAAATGACTGCCTTCAGGAAGAGCTGAGAAT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AGGAAACTCCTCCACGGACTCTTGGAACTCGGGCAAGGACCTTCGTCCGTAACGCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RKLLHGLLELGQGPSSVTLTYLG*ASSEQL
Trigger: TAACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...CGTTACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCCTCATGCTGGTCCTaGTCCACCTCATCCATCCCA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGASCWS*STSSIP
Trigger: TGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTGCCTCATGCTGGTCCTaGTCCACCTCATCCATCCCA +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTASCWS*STSSIP
Trigger: TGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGC...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSVSSS*PRDPVP
Trigger: GGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESASVSSS*PRDPVP
Trigger: GGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCGTTGCGTCTTCCAGTaGTCACTGCAGTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRCVFQ*SLQSPA
Trigger: AGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTCTTCACAAACTTCTTaGAGTTTCTCTTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLSSQTS*SFSSIQ
Trigger: CTGGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGACTGCATGGAAAGGTaGCTTTTTAGTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRDCMER*LFSCLY
Trigger: ATATAGACAACTAAAAAGGCACCTTTCCATGCAGTC...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCGTTCTCATGCCTTTaGTTCATGTTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSFSCL*FMFSCA
Trigger: GGCACAGGAGAACATGAAGCAAAGGCATGAGAACGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTGTCGTTCTCATGCCTTTaGTTCATGTTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QRKPEHSALCTIFFQLRLSFSCL*FMFSCA
Trigger: GGCACAGGAGAACATGAAGCAAAGGCATGAGAACGA...CAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR GCA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGAACCATCTTCTGAACTaGAGCATTTTCTTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: APWAPSDRLAAGAAANPKNHLLN*SIFLFY
Trigger: GTAAAACAAGAAAATGCTGCAGTTCAGAAGATGGTT...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTCCCGTTCCTCCAATaGACTGTTTCCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCFPFLQ*TVSWLF
Trigger: AAAGAGCCAGGAAACAGTGCATTGGAGGAACGGGAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGACCTTCTCCCGGGAGTaGGTGAGTTCGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGTFSRE*VSSALV
Trigger: CACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 4 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTCAGACAGCAGGCTTTaGTGGGTTTCAGATACATTT +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAESDSRL*WVSDTF
Trigger: AAATGTATCTGAAACCCAGCAAAGCCTGCTGTCTGA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCTGCTCCGAAGCCCCTaGCTGGCACAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLLRSP*LAQDLL
Trigger: GAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGAGCAG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCTGCTCCGAAGCCCCTaGCTGGCACAGGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESALLRSP*LAQDLL
Trigger: GAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGAGCAG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGTCTGGAGATTTCTGTaGTCATCTCGGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCVWRFL*SSRLFL
Trigger: GAGAAAGAGCCGAGATGAGCACAGAAATCTCCAGAC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTGCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QRKPEHSALCTIFFQLRLLHHCV*LSVLAE
Trigger: CTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG...CAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR GCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCAAAAATTCAAAGGTTTaGTTCATCAGTGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGKNSKV*FISVNS
Trigger: GGAGTTCACACTGATGAAGCAAACCTTTGAATTTTT...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGAAAAATTCAAAGGTTTaGTTCATCAGTGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSKNSKV*FISVNS
Trigger: GGAGTTCACACTGATGAAGCAAACCTTTGAATTTTT...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCAAATCTAAGCTTAAGTaGAGGCTTCTAAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGKSKLK*RLLKSR
Trigger: TCTGCTTTTTAGAAGCCTGCACTTAAGCTTAGATTT...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGGGAACCATGGCCGCTaGCGCACTCCGGGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIGNHGR*RTPGLA
Trigger: CGCCAAGCCCGGAGTGCGCCAGCGGCCATGGTTCCC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530997.7
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGTCGGGCCTCATGCTaGTCCTGCTCCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSRASC*SCSTSS
Trigger: GGATGAGGTGGAGCAGGACCAGCATGAGGCCCGACT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTGTCTGCTGCAGCACTaGGGCCACCTCCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHCLLQH*GHLLQA
Trigger: AGCTTGGAGGAGGTGGCCCCAGTGCTGCAGCAGACA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCTCTCCACAGATGCATaGCCCATCCCATCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHLSTDA*PIPSSR
Trigger: CCTGGATGATGGGATGGGCCATGCATCTGTGGAGAG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCCTCATGCCTGCAAGTaGCCTCATGATGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHPHACK*PHDVPP
Trigger: AGGAGGCACATCATGAGGCCACTTGCAGGCATGAGG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTCCTGTTGCACAATATaGGTCTGTATTTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRSCCTI*VCILTS
Trigger: TGAAGTTAAAATACAGACCCATATTGTGCAACAGGA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GAGTTCTTCAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTTCCTGGTTTCCCTGTaGTGTGTTGGTTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: EFFNGSLSTLPCARYSSSFLVSL*CVGFGG
Trigger: ACCTCCGAAACCAACACACCACAGGGAAACCAGGAA...GCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CCA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ACTGGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGCTCAGCAGAAAGAACCATaGCAACTGCTGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: TGKHPRLSILRQKPSVRAQQKEP*QLLGTG
Trigger: TCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTG...AGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYCQTAP*VGPHAG
Trigger: ACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCGAGCAGTCTGGTTCTTaGAAGTGTTCTTCATTTGAC +
Preference number: 4 (lower is better)
Translates to: QGIQQKEPWQLLGTGKHPEQSGS*KCSSFD
Trigger: GTCAAATGAAGAACACTTTCAAGAACCAGACTGCTC...GGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACGGAAGATCCACTCTGTaGAGCATTCAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYGRSTL*SIQVIW
Trigger: CCAGATGACTTGAATGCTTCACAGAGTGGATCTTCC...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCC +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELIFFRFR*PSRVIP
Trigger: GGGGATCACCCGTGATGGTCACCTGAACCGGAAGAA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACGCCTCCTTTTCCTGCTaGGTCACTCGTAGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHASFSC*VTRRSD
Trigger: ATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGC...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHWSPDG*VAISGA
Trigger: GGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTGTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: QRKPEHSALCTIFFQLRLSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...CAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCAGACTCCTCTATTTTaGCTTCCTGTCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCQTPLF*LPVSEQ
Trigger: CTGTTCAGAGACAGGAAGTCAAAATAGAGGAGTCTG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCTGGACCACGCTTTCCTaGAGCTTCTCAATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGWTTLS*SFSILP
Trigger: AGGCAAGATTGAGAAGCTTCAGGAAAGCGTGGTCCA...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp TTCAGGAAACTCCTCCACGGACTCTTGGAACTCGGGCAAGGACCTTCGTCCGTACTGGAAATACAAAAATaGACAGCATGGTCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: FRKLLHGLLELGQGPSSVLEIQK*TAWSSR
Trigger: CCTTGAGGACCATGCTGTTCATTTTTGTATTTCCAG...TACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR TCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGCCTTTGGTTTGGCTATaGCCTCAAAGGAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLPLVWL*PQRRCR
Trigger: TCTACACCTCCTTTGAGGTCATAGCCAAACCAAAGG...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVSVSSS*PRDPVP
Trigger: GGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGCACTGGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGGTCAAAATGTACCCTaGCCAAGAGGTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GTGKHPRLSILRQKPSVRGQNVP*PRGCPE
Trigger: TTCAGGACAACCTCTTGGGCAGGGTACATTTTGACC...TCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTCTGTAAACCATACTaGTCACAGATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCFCKPY*SQMETS
Trigger: GCTGGTCTCCATCTGTGAGCAGTATGGTTTACAGAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GAGTTCTTCAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTATTCTCTCCACAGATaGATGGCCCATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: EFFNGSLSTLPCARYSSSYSLHR*MAHPII
Trigger: GATGATGGGATGGGCCATGCATCTGTGGAGAGAATA...GCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTGGGGCCCAGCTCTTaGCACCAGCATTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLGPSS*HQHSEV
Trigger: AACTTCAGAATGCTGGTGGCAAGAGCTGGGCCCCAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCACCTTCTCCCGGGAGTaGGTGAGTTCGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASTFSRE*VSSALV
Trigger: CACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTACCTTCTCCCGGGAGTaGGTGAGTTCGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFTFSRE*VSSALV
Trigger: CACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGT...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATACCTTCTCCCGGGAGTaGGTGAGTTCGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYTFSRE*VSSALV
Trigger: CACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGT...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TTCTGTAGGAATCTGCGTGCACTGCTCGCTGCTCCGGTAGCAAGGCCTGTGGTGAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 4 (lower is better)
Translates to: FCRNLRALLAAPVARPVVKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...CACCACAGGCCTTGCTACCGGAGCAGCGAGCAGTGCACGCAGATTCCTACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACAGGTCTTGGAGTAGCTaGTGTCTCTCGACGACCATG +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHRSWSS*CLSTTM
Trigger: CATGGTCGTCGAGAGACAGCAGCTACTCCAAGACCT...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGGAGATGTTGCCTGCTaGATTTCCTTTATTTTACTC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEGDVAC*ISFILL
Trigger: GAGTAAAATAAAGGAAATGCAGCAGGCAACATCTCC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGTCACACCTTCTACTTaGTTCGTTCGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCVTPST*FVRFCC
Trigger: ACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGAC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACAAGTCTTCCACCAACTaGTGGCGGAAGTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHKSSTN*WRKWLA
Trigger: TGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTCCAAAACCTTAACTaGCCTTCCGCTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCFQNLN*PSASYS
Trigger: GGAGTATGAAGCGGAAGGCCAGTTAAGGTTTTGGAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTGAGACCCGAAAGCCAATaGTACTTGTCATTGCTGATG +
Preference number: 4 (lower is better)
Translates to: QRKPEHSALCTIFFQLRLRPESQ*YLSLLM
Trigger: CATCAGCAATGACAAGTACCATTGGCTTTCGGGTCT...CAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTCTCCACAGATGCATaGCCCATCCCATCATCCAGG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLSTDA*PIPSSR
Trigger: CCTGGATGATGGGATGGGCCATGCATCTGTGGAGAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACTCTCCACAGATGCATaGCCCATCCCATCATCCAGG +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRLSTDA*PIPSSR
Trigger: CCTGGATGATGGGATGGGCCATGCATCTGTGGAGAG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCCTCATGCCTGCAAGTaGCCTCATGATGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGPHACK*PHDVPP
Trigger: AGGAGGCACATCATGAGGCCACTTGCAGGCATGAGG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCGACAGCCTTTTCTGCTaGTTATGGAGCCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGDSLFC*LWSPDG
Trigger: TCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCACGCTGCTGTTCCTaGAGGTCCTTCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSRCCS*RSFSSW
Trigger: CCAAGAGCTGAAGGACCTCCAGGAACAGCAGCGTGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTCCGAAGCCCCTGCCTaGCACAGGACCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSEAPA*HRTSSR
Trigger: GCGTGAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCCATGGCTAGAAGCTTaGACATCATTTCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCPWLEA*TSFPAF
Trigger: AAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACAGGTGTAGAAGTCAATaGCGCTGGTGTCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYRCRSQ*RWCQIP
Trigger: AGGAATCTGACACCAGCGCCATTGACTTCTACACCT...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
3UTR CAA 72 bp ACCTCCGAGGCCATTAAAGACTTGAGCTTCTCGGCCTaGTCCAGATCTGACCGTAGCTTCTCTTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TSEAIKDLSFSA*SRSDRSFSFSL
Trigger: CAGAGAAAAAGAGAAGCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTCGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESATGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCC +
Preference number: 4 (lower is better)
Translates to: FIFELQSEATYVPVMLFFFFRFR*PSRVIP
Trigger: GGGGATCACCCGTGATGGTCACCTGAACCGGAAGAA...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHRPLKT*ASRPCP
Trigger: TGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCT...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESASMAAW*SSTSEA
Trigger: GGCCTCGGAGGTGGATGATCACCATGCGGCCATAGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSSTEA*ALCLVH
Trigger: GTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSFSCR*VFSSSS
Trigger: GCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCCGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LVLKPPFPAESLVGQISSRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGCCACATTTCTTCCTaGGATCCATTTAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCCHISS*DPFNVP
Trigger: AGGGACATTAAATGGATCTCAGGAAGAAATGTGGCA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKSPGSA*VRLWCS
Trigger: AGAACACCAAAGCCGAACTCACGCACTCCCGGGAGA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GAGTTCTTCAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTTTGCTTCATCAGTGTaGACTCCCAGTCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: EFFNGSLSTLPCARYSSSFASSV*TPSPTK
Trigger: TTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAA...GCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCCCATAGCCCACAGTaGTCACCTTCTGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSHSPQ*SPSVGL
Trigger: GAGACCGACAGAAGGTGAGCACTGTGGGCTATGGGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGCCCCAGGGACCCTGTaGCCGTCGTGTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMAPGTL*PSCQNC
Trigger: ACAGTTTTGACACGACGGGCACAGGGTCCCTGGGGC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTGGTCAAAATGTACCCTaGCCAAGAGGTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLGQNVP*PRGCPE
Trigger: TTCAGGACAACCTCTTGGGCAGGGTACATTTTGACC...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTCTTCCAGTGCTCACTaGAGTCACCGGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFSSSAH*SHRLGC
Trigger: ACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAGA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGTTGCGTCTTCCAGTaGTCACTGCAGTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKRCVFQ*SLQSPA
Trigger: AGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTACTCCTCACTGCGTTaGGTCTTCCAGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGYSSLR*VFQCSL
Trigger: CAGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCATCTTCACAAACTTCTTaGAGTTTCTCTTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSSSQTS*SFSSIQ
Trigger: CTGGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGA...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASPGCSQ*PLPARC
Trigger: ACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCGCTGCTTGCCTGCCTaGTGCAGGATCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMRCLPA*CRICSL
Trigger: GAGAGAGCAGATCCTGCAGCAGGCAGGCAAGCAGCG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCGCTGCTTGCCTGCCTaGTGCAGGATCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESARCLPA*CRICSL
Trigger: GAGAGAGCAGATCCTGCAGCAGGCAGGCAAGCAGCG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGTTCTAAACGCTGCTTaGCTGCCTGCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGVLNAA*LPAAGS
Trigger: AGATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAAC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCACAGATTCTCATATTCTaGCAACTTCTCTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSQILIF*QLLCIF
Trigger: GAAAATGCAGAGAAGTTGGCAGAATATGAGAATCTG...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVCLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTCTCCTCCTCATGCCTaGAAGTGGCCTCATGATGTG +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYSPPHA*KWPHDV
Trigger: CACATCATGAGGCCACTTGCAGGCATGAGGAGGAGA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTCCCGCTCAAAGCTTaGTTGAGCCTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLPLKA*LSLCQS
Trigger: AGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCTGGGGCCCAGCTCTTaGCACCAGCATTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHLGPSS*HQHSEV
Trigger: AACTTCAGAATGCTGGTGGCAAGAGCTGGGCCCCAG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCACCATCGGACAGGCTTaGTGCTGGAGCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVTIGQA*CWSSCK
Trigger: TTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCGCCCCTCCAGGCTTTaGAGAGCGCTTTCACACCTC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSRPSRL*RALSHL
Trigger: GAGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCAGACAGCAGGCTTTaGTGGGTTTCAGATACATTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSDSRL*WVSDTF
Trigger: AAATGTATCTGAAACCCAGCAAAGCCTGCTGTCTGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAGGTCACTTAGGACATaGCGCCTGGTCACACCTTCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRSLRT*RLVTPS
Trigger: AGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp TGGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGCTGCTGTGTACATGACGCATaGACAGAAATGTCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WKAPQAQYLEAKTKCSSCCVHDA*TEMSAL
Trigger: GAGAGCTGACATTTCTGTGCATGCGTCATGTACACA...GCAGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCCAAGCTCAACATGTaGCAAAGGTCGGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSKLNM*QRSVSS
Trigger: GGAACTCACCGACCTTTGCCACATGTTGAGCTTGGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTGTCTGCTGCAGCACTaGGGCCACCTCCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESACLLQH*GHLLQA
Trigger: AGCTTGGAGGAGGTGGCCCCAGTGCTGCAGCAGACA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSSIQS*GGEDPL
Trigger: GAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGAFRIS*LFSMPS
Trigger: AGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTGCCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTAFRIS*LFSMPS
Trigger: AGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGC...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATGCCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYAFRIS*LFSMPS
Trigger: AGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGC...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCATTCCGCCGCTCTATaGCCGCATGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHHSAAL*PHGDHP
Trigger: TGGATGATCACCATGCGGCCATAGAGCGGCGGAATG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTGCAGAAACTGCTCCCTaGGCACCATCGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: FIFELQSEATYVPVMLFFAETAP*APSDRL
Trigger: AAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGC...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAGGTCTTCCAGGTCTTaGAGTAGCTGCTGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRRSSRS*SSCCLS
Trigger: CGAGAGACAGCAGCTACTCCAAGACCTGGAAGACCT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTCCGAAGCCCCTGCCTaGCACAGGACCTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSSEAPA*HRTSSR
Trigger: GCGTGAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAGTCTTTCCAGCCGCTaGCTGGCCAGCTGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSLSSR*LASCSE
Trigger: TTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAAGACT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGTGAATGTTCTCCATaGCTAGAAGCTTGGACATCA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCCECSP*LEAWTS
Trigger: TGATGTCCAAGCTTCTAGCCATGGAGAACATTCACA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTAACTCTGCTATGGTaGCCTGATGCTGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLTLLW*PDAENV
Trigger: AACATTTTCAGCATCAGGCCACCATAGCAGAGTTAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCTTCCACCAACTGCTaGCGGAAGTGGCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSSTNC*RKWLAE
Trigger: CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTGTGGCAAAGGTCGGTaGGTTCCTCCTGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQCGKGR*VPPAPG
Trigger: CCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ACTGGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGCTCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TGKHPRLSILRQKPSVRALTYLG*ASSEQS
Trigger: AGACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...AGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVTGWDV*RPRFFI
Trigger: GATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRPLKT*ASRPCP
Trigger: TGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRPLKT*ASRPCP
Trigger: TGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFSFSCR*VFSSSS
Trigger: GCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCT...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGCTTCTCCTGCAGGTaGGTCTTTTCCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSFSCR*VFSSSS
Trigger: GCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTCGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTGGTTATGGAGCCCTaGTGGATGAGTAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLVMEP*WMSSYL
Trigger: GAGATAGCTACTCATCCATCAGGGCTCCATAACCAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSPGSA*VRLWCS
Trigger: AGAACACCAAAGCCGAACTCACGCACTCCCGGGAGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCTCCCGGGAGTGCGTaGGTTCGGCTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESASPGSA*VRLWCS
Trigger: AGAACACCAAAGCCGAACTCACGCACTCCCGGGAGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAACTGGGCTTCTATTTaGGAGGTTCTTCTATTACAC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCNWASI*EVLLLH
Trigger: GTGTAATAGAAGAACCTCTCAAATAGAAGCCCAGTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGACCACTCTGAAGCATTaGGAGAGGAGATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGTTLKH*ERRCCL
Trigger: CAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTCACTGCCTGTTCATaGGCTCTCTGCAGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFTACS*ALCRLK
Trigger: CTTAAGCCTGCAGAGAGCTCATGAACAGGCAGTGAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTTGACTTCCTGTCTCTaGACAGAGCTCGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYLTSCL*TELVPV
Trigger: TACAGGGACGAGCTCTGTTCAGAGACAGGAAGTCAA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTCTCAATCTTGCCTTaGAGTCTCAAAACCAGAACA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCFSILP*SLKTRT
Trigger: TGTTCTGGTTTTGAGACTTCAAGGCAAGATTGAGAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTGGACCACGCTTTCCTaGAGCTTCTCAATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGWTTLS*SFSILP
Trigger: AGGCAAGATTGAGAAGCTTCAGGAAAGCGTGGTCCA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCGAATGGGGACCCGCGTaGGCGTCATTTCCATATGTA +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVEWGPA*ASFPYV
Trigger: TACATATGGAAATGACGCTCACGCGGGTCCCCATTC...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCCTTTGGTTTGGCTATaGCCTCAAAGGAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHPLVWL*PQRRCR
Trigger: TCTACACCTCCTTTGAGGTCATAGCCAAACCAAAGG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACGAGAGTACAATAGGATaGGAGAGGTGGGTTTTACTA +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYESTIG*ERWVLL
Trigger: TAGTAAAACCCACCTCTCTCATCCTATTGTACTCTC...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCACTATTTTACAGTGCTaGGAGGTCCAGATAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGTILQC*EVQIGP
Trigger: TGGACCTATCTGGACCTCTCAGCACTGTAAAATAGT...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTACTATTTTACAGTGCTaGGAGGTCCAGATAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLTILQC*EVQIGP
Trigger: TGGACCTATCTGGACCTCTCAGCACTGTAAAATAGT...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCGCTGCTTTATCACACTaGACTCTAAATGTGTACATG +
Preference number: 4 (lower is better)
Translates to: CKESSRKNHGNCWALESTAALSH*TLNVYM
Trigger: CATGTACACATTTAGAGTTCAGTGTGATAAAGCAGC...GGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR GCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFSVSSS*PRDPVP
Trigger: GGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTGCCTGCTGCAGGATCTaGTCTCTCTCTTTTCGGAGT +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFACCRI*SLSFRS
Trigger: ACTCCGAAAAGAGAGAGAGCAGATCCTGCAGCAGGC...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTCAAGTTCTAAACGCTaGTTGCCTGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSSSKR*LPACCR
Trigger: CCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACTTGA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGAGCACTCTGCCTTGTaGACGATATTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGEHSAL*TIFFQL
Trigger: GAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCATATTCAATGGATTaGATTCTTCAGAACCGAGCC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSYSMD*ILQNRA
Trigger: GGCTCGGTTCTGAAGAATGCAATCCATTGAATATGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTTGCGTTTCGTTCTCATaGCTTTGCTTCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLCVSFS*LCFMFS
Trigger: GGAGAACATGAAGCAAAGGCATGAGAACGAAACGCA...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTCTCCTCCTCATGCCTaGAAGTGGCCTCATGATGTG +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFSPPHA*KWPHDV
Trigger: CACATCATGAGGCCACTTGCAGGCATGAGGAGGAGA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGAACCATCTTCTGAACTaGAGCATTTTCTTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAENHLLN*SIFLFY
Trigger: GTAAAACAAGAAAATGCTGCAGTTCAGAAGATGGTT...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGCAGGTTTACATTCTaGACGGTGTCTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCCRFTF*TVSSKF
Trigger: GAATTTAGAAGACACCGTGCAGAATGTAAACCTGCA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCACCTTCTCCCGGGAGTaGGTGAGTTCGGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTTFSRE*VSSALV
Trigger: CACCAAAGCCGAACTCACGCACTCCCGGGAGAAGGT...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGCAGTGGACCTCAGGTaGTGCATCTCCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMAVDLR*CISMSC
Trigger: GCAGCTCATGGAGATGCAGCACCTGAGGTCCACTGC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCAGGTCTTGGAGTAGCTaGTGTCTCTCGACGACCATG +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASRSWSS*CLSTTM
Trigger: CATGGTCGTCGAGAGACAGCAGCTACTCCAAGACCT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGGAGATGTTGCCTGCTaGATTTCCTTTATTTTACTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCGDVAC*ISFILL
Trigger: GAGTAAAATAAAGGAAATGCAGCAGGCAACATCTCC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTGCTTCGTTCGGTTTTaGTGTAAAAACTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCCFVRF*CKNCSV
Trigger: AACAGAGCAGTTTTTACAGCAAAACCGAACGAAGCA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAGCAGTGGACCTCAGGTaGTGCATCTTCACACACTAT +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRAVDLR*CIFTHY
Trigger: ATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGC...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATAAGTCTTCCACCAACTaGTGGCGGAAGTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYKSSTN*WRKWLA
Trigger: TGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCAGTCGGGCCTCATGCTaGTCCTGCTCCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFSRASC*SCSTSS
Trigger: GGATGAGGTGGAGCAGGACCAGCATGAGGCCCGACT...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCCAAGCTCAACATGTaGCAAAGGTCGGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSKLNM*QRSVSS
Trigger: GGAACTCACCGACCTTTGCCACATGTTGAGCTTGGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCATACTGCTCACAGATaGAGACCAGCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGHTAHR*RPASSG
Trigger: ACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCATTCCGCCGCTCTATaGCCGCATGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKHSAAL*PHGDHP
Trigger: TGGATGATCACCATGCGGCCATAGAGCGGCGGAATG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCAGGCTCTTTTTCCTTCTaGCATAGCATTTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: SPPGLSAAPGETALVPESGSFSF*HSISVR
Trigger: TCTAACAGAAATGCTATGCCAGAAGGAAAAAGAGCC...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGACAGCCTTTTCTGCTaGTTATGGAGCCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGDSLFC*LWSPDG
Trigger: TCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHFCTMV*SLSFSC
Trigger: GCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCATTTTTCTTGCTCTGTaGGATTCATGGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCIFLAL*DSWYLM
Trigger: CATCAGGTACCATGAATCCCACAGAGCAAGAAAAAT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCAGTCTTTCCAGCCGCTaGCTGGCCAGCTGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSLSSR*LASCSE
Trigger: TTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAAGACT...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTAGGACATGCCGCCTaGTCACACCTTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLGHAA*SHLLLA
Trigger: AGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTTGATTCTGTACTCTTaGCCTTTCTTGATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLILYS*PFLMCL
Trigger: CAGACACATCAAGAAAGGCCAAGAGTACAGAATCAA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCQTAP*VGPHAG
Trigger: ACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLFFRFR*PSRVIP
Trigger: GGGGATCACCCGTGATGGTCACCTGAACCGGAAGAA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLARAAW*MLFLVT
Trigger: GGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHASLFL*PPDQLV
Trigger: AACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGC...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTCTATGGCCGCATGGTaGTCATCCACCTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISMAAW*SSTSEA
Trigger: GGCCTCGGAGGTGGATGATCACCATGCGGCCATAGA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSSTEA*ALCLVH
Trigger: GTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCTGCAAGTGGCCTCATaGTGTGCCTCCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLQVAS*CASLST
Trigger: AGTGCTCAAGGAGGCACATCATGAGGCCACTTGCAG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCTGCAAGTGGCCTCATaGTGTGCCTCCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTLQVAS*CASLST
Trigger: AGTGCTCAAGGAGGCACATCATGAGGCCACTTGCAG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGCCTCCTTTTCCTGCTaGGTCACTCGTAGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKASFSC*VTRRSD
Trigger: ATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLWSPDG*VAISGA
Trigger: GGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTCTGGTTATGGAGCCCTaGTGGATGAGTAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFLVMEP*WMSSYL
Trigger: GAGATAGCTACTCATCCATCAGGGCTCCATAACCAG...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCCTCATTCATCAGATaGTCCAACTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSSFIR*SNLSQD
Trigger: GTCCTGGGACAAGTTGGATCATCTGATGAATGAGGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCATTCGTTCCTCCATaGCAGTTACCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSFVPP*QLPVVP
Trigger: AGGAACAACTGGTAACTGTCATGGAGGAACGAATGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCACCTGGCAACCACTCTaGAGCATTGAGAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASTWQPL*SIERGD
Trigger: ATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCAGACTCCTCTATTTTaGCTTCCTGTCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHQTPLF*LPVSEQ
Trigger: CTGTTCAGAGACAGGAAGTCAAAATAGAGGAGTCTG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATCATTCCTCTATGACATaGTGTACACTCCTAACCCTG +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHHSSMT*CTLLTL
Trigger: CAGGGTTAGGAGTGTACATCATGTCATAGAGGAATG...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCTATTTGGCACTCCTTaGCCTCAGGTGGCATGCCAA +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKLFGTP*PQVACQ
Trigger: TTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACAAAATACAACAACCGTaGTCACATGCTAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHKIQQP*SHAKAS
Trigger: GCTGGCCTTAGCATGTGATCACGGTTGTTGTATTTT...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGTTGATTCCCTTTTCTTaGAACGAAGATCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLLIPFS*NEDPIF
Trigger: GAAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAA...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACACTATTTTACAGTGCTaGGAGGTCCAGATAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHTILQC*EVQIGP
Trigger: TGGACCTATCTGGACCTCTCAGCACTGTAAAATAGT...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCCCATAGCCCACAGTaGTCACCTTCTGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSHSPQ*SPSVGL
Trigger: GAGACCGACAGAAGGTGAGCACTGTGGGCTATGGGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCGCCCCAGGGACCCTGTaGCCGTCGTGTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSAPGTL*PSCQNC
Trigger: ACAGTTTTGACACGACGGGCACAGGGTCCCTGGGGC...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGCCCCAGGGACCCTGTaGCCGTCGTGTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQAPGTL*PSCQNC
Trigger: ACAGTTTTGACACGACGGGCACAGGGTCCCTGGGGC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTGGTCAAAATGTACCCTaGCCAAGAGGTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTGQNVP*PRGCPE
Trigger: TTCAGGACAACCTCTTGGGCAGGGTACATTTTGACC...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCTTCCAGTGCTCACTaGAGTCACCGGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSSAH*SHRLGC
Trigger: ACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCCTTCATACTCCTCACTaGGTTGCGTCTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVLHTPH*VASSSA
Trigger: AGCACTGGAAGACGCAACGCAGTGAGGAGTATGAAG...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCTTCATACTCCTCACTaGGTTGCGTCTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHLHTPH*VASSSA
Trigger: AGCACTGGAAGACGCAACGCAGTGAGGAGTATGAAG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTATTCTCTCCACAGATaGATGGCCCATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGYSLHR*MAHPII
Trigger: GATGATGGGATGGGCCATGCATCTGTGGAGAGAATA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSMPSS*QVSSIL
Trigger: GAGAATACTGGACACCTGGCAGGAAGAGGGCATTGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTGCCTGCTGCAGGATCTaGTCTCTCTCTTTTCGGAGT +
Preference number: 4 (lower is better)
Translates to: FIFELQSEATYVPVMLFFACCRI*SLSFRS
Trigger: ACTCCGAAAAGAGAGAGAGCAGATCCTGCAGCAGGC...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTCAAGTTCTAAACGCTaGTTGCCTGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGSSSKR*LPACCR
Trigger: CCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACTTGA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCAGATTCTCATATTCTaGCAACTTCTCTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCQILIF*QLLCIF
Trigger: GAAAATGCAGAGAAGTTGGCAGAATATGAGAATCTG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAGCACTCTGCCTTGTaGACGATATTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHEHSAL*TIFFQL
Trigger: GAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTC...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATCGTTCTCATGCCTTTaGTTCATGTTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSFSCL*FMFSCA
Trigger: GGCACAGGAGAACATGAAGCAAAGGCATGAGAACGA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCTCCTTGAGCACTGCTaGTTGCCCCTGAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTLLEHC*LPLKFS
Trigger: GCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FAGLHSARCLLNSEPFPECLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAGCTCCATCTCATGTTaGAGCCTCAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKSSISC*SLSFSC
Trigger: GCAGGAGAAGCTGAGGCTGCAACATGAGATGGAGCT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTAGCTCCATCTCATGTTaGAGCCTCAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FIFELQSEATYVPVMLFFSSISC*SLSFSC
Trigger: GCAGGAGAAGCTGAGGCTGCAACATGAGATGGAGCT...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGACCATCGGACAGGCTTaGTGCTGGAGCAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMTIGQA*CWSSCK
Trigger: TTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAGAGGAGATGTTGCCTaGTGCATTTCCTTTATTTTA +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCRGDVA*CISFIL
Trigger: TAAAATAAAGGAAATGCAGCAGGCAACATCTCCTCT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTGGTAATTTTTCTTCTCTaGTGTTTTCTGTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QRKPEHSALCTIFFQLRLVIFLL*CFLSLF
Trigger: GAACAGCGACAGAAAACAGCAGAGAAGAAAAATTAC...CAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACGATGAACTTGGAAAGTaGCCTGCACCTAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHDELGK*PAPSKS
Trigger: AGACTTACTAGGTGCAGGGCACTTTCCAAGTTCATC...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTCCAAGCTCAACATGTaGCAAAGGTCGGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELISKLNM*QRSVSS
Trigger: GGAACTCACCGACCTTTGCCACATGTTGAGCTTGGA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTCCAAGCTCAACATGTaGCAAAGGTCGGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFSKLNM*QRSVSS
Trigger: GGAACTCACCGACCTTTGCCACATGTTGAGCTTGGA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYSSIQS*GGEDPL
Trigger: GAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGA...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCATACTGCTCACAGATaGAGACCAGCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHHTAHR*RPASSG
Trigger: ACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTGCTGATGAGGTTGTaGTACGTCGTCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLLMRL*YVVHSH
Trigger: ATGAGAGTGGACGACGTACCACAACCTCATCAGCAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTTGCTGATGAGGTTGTaGTACGTCGTCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYLLMRL*YVVHSH
Trigger: ATGAGAGTGGACGACGTACCACAACCTCATCAGCAA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSSSSD*SSSTWS
Trigger: AGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCATGAGTAGCTATCTCTaGGGCCCAGCTCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSMSSYL*GPALAT
Trigger: GGTGGCAAGAGCTGGGCCCCAGAGATAGCTACTCAT...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCATGAGTAGCTATCTCTaGGGCCCAGCTCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESAMSSYL*GPALAT
Trigger: GGTGGCAAGAGCTGGGCCCCAGAGATAGCTACTCAT...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTATGAGTAGCTATCTCTaGGGCCCAGCTCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLMSSYL*GPALAT
Trigger: GGTGGCAAGAGCTGGGCCCCAGAGATAGCTACTCAT...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTGACAGCCTTTTCTGCTaGTTATGGAGCCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELIDSLFC*LWSPDG
Trigger: TCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYFCTMV*SLSFSC
Trigger: GCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGAWEED*IPTDGP
Trigger: AGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTCTCAAATTCCCACTaGGATTTCTCCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFSNSH*DFSSRC
Trigger: GCAGCGTGAGGAGAAATCCCAGTGGGAATTTGAGAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTCAGCTCAAGTATCTaGTCAGACAGCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFSSSI*SDSRLC
Trigger: GCAAAGCCTGCTGTCTGACCAGATACTTGAGCTGAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCCAGGTTCTCTAAACTaGCTTCCCATAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGPGSLN*LPISSS
Trigger: ACTGCTGCTTATGGGAAGCCAGTTTAGAGAACCTGG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTCTTCCACCAACTGCTaGCGGAAGTGGCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSSTNC*RKWLAE
Trigger: CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TTCAGGAAACTCCTCCACGGACTCTTGGAACTCGGGCAAGGACCTTCGTCCGTATCAAGGAATTATCACTaGTTCTTGAAAGTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FRKLLHGLLELGQGPSSVSRNYH*FLKVFF
Trigger: GAAGAACACTTTCAAGAACCAGTGATAATTCCTTGA...TACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR TCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSPKRLS*SNVCCS
Trigger: GCTGCAGCAGACATTACTTCAGGACAACCTCTTGGG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TTCATCCAGTGGCTCAATCACCGTCACTTCAGGAAACTCCTCCACGGACTCTTGAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: FIQWLNHRHFRKLLHGLLKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...CAAGAGTCCGTGGAGGAGTTTCCTGAAGTGACGGTGATTGAGCCACTGGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR TCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATGAGCAGTCTGGTTCTTaGAAGTGTTCTTCATTTGAC +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHEQSGS*KCSSFD
Trigger: GTCAAATGAAGAACACTTTCAAGAACCAGACTGCTC...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTCTTCAACGGAAGCCTaGGCACTCTGCCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVSSTEA*ALCLVH
Trigger: GTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCTTCGAGCTCCAGTCTaGGGCAACATATGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLRAPV*GNICPC
Trigger: ACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGACTGCTGCTTGCCCCTaGAGTTCAGCAATTTCATTT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGTAACP*SSAISF
Trigger: AAATGAAATTGCTGAACTTCAGGGGCAAGCAGCAGT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAACTGCTGCTTGCCCCTaGAGTTCAGCAATTTCATTT +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRTAACP*SSAISF
Trigger: AAATGAAATTGCTGAACTTCAGGGGCAAGCAGCAGT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAACTGCTCTAGTTCCTaGGTCAAGCCTCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKNCSSS*VKPLTF
Trigger: GAAGGTGAGAGGCTTGACTCAGGAACTAGAGCAGTT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTTAAGCTCGCACTCTaGTGTTCCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFKLAL*CSQDFC
Trigger: ACAGAAATCCTGGGAACATCAGAGTGCGAGCTTAAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGCCTCCTTTTCCTGCTaGGTCACTCGTAGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMASFSC*VTRRSD
Trigger: ATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCGCCTCCTTTTCCTGCTaGGTCACTCGTAGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTASFSC*VTRRSD
Trigger: ATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGC...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCCTCATTCATCAGATaGTCCAACTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSSFIR*SNLSQD
Trigger: GTCCTGGGACAAGTTGGATCATCTGATGAATGAGGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAGATTGGATTCCAACTaGCGGACCTTCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLRLDSN*RTFSRE
Trigger: CTCCCGGGAGAAGGTCCGTCAGTTGGAATCCAATCT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTGCAAATCCCAAGCATaGGGGGACGGGCTAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFCKSQA*GDGLGV
Trigger: GACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTCATTCGTTCCTCCATaGCAGTTACCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTSFVPP*QLPVVP
Trigger: AGGAACAACTGGTAACTGTCATGGAGGAACGAATGA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCACAGGTCGCTTTGTaGATGTTCTCCATGGCTAGA +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSQVAL*MFSMAR
Trigger: TCTAGCCATGGAGAACATTCACAAAGCGACCTGTGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCACTCTTCCAGTGTCTaGTTGAGCTGGAGTATATTT +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHHSSSV*LSWSIF
Trigger: AAATATACTCCAGCTCAATCAGACACTGGAAGAGTG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCATTCCTCTATGACATaGTGTACACTCCTAACCCTG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGHSSMT*CTLLTL
Trigger: CAGGGTTAGGAGTGTACATCATGTCATAGAGGAATG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCTATTTGGCACTCCTTaGCCTCAGGTGGCATGCCAA +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESALFGTP*PQVACQ
Trigger: TTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTCCCATAGCCCACAGTaGTCACCTTCTGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLSHSPQ*SPSVGL
Trigger: GAGACCGACAGAAGGTGAGCACTGTGGGCTATGGGA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTCCCATAGCCCACAGTaGTCACCTTCTGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVSHSPQ*SPSVGL
Trigger: GAGACCGACAGAAGGTGAGCACTGTGGGCTATGGGA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGCCTCATGCTGGTCCTaGTCCACCTCATCCATCCCA +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQASCWS*STSSIP
Trigger: TGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCGGTCAAAATGTACCCTaGCCAAGAGGTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASGQNVP*PRGCPE
Trigger: TTCAGGACAACCTCTTGGGCAGGGTACATTTTGACC...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCGTTGCGTCTTCCAGTaGTCACTGCAGTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQRCVFQ*SLQSPA
Trigger: AGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATTCTGTAAACCATACTaGTCACAGATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRFCKPY*SQMETS
Trigger: GCTGGTCTCCATCTGTGAGCAGTATGGTTTACAGAA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCGCCTGCTGCAGGATCTaGTCTCTCTCTTTTCGGAGT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESAACCRI*SLSFRS
Trigger: ACTCCGAAAAGAGAGAGAGCAGATCCTGCAGCAGGC...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCAAGTTCTAAACGCTaGTTGCCTGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSSKR*LPACCR
Trigger: CCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACTTGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACCAGATTCTCATATTCTaGCAACTTCTCTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYQILIF*QLLCIF
Trigger: GAAAATGCAGAGAAGTTGGCAGAATATGAGAATCTG...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTGCGTTTCGTTCTCATaGCTTTGCTTCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGCVSFS*LCFMFS
Trigger: GGAGAACATGAAGCAAAGGCATGAGAACGAAACGCA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLCLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCTCCTCCTCATGCCTaGAAGTGGCCTCATGATGTG +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSPPHA*KWPHDV
Trigger: CACATCATGAGGCCACTTGCAGGCATGAGGAGGAGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAACCATCTTCTGAACTaGAGCATTTTCTTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCNHLLN*SIFLFY
Trigger: GTAAAACAAGAAAATGCTGCAGTTCAGAAGATGGTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATCAGGATTTCTGTTCCTaGTTCATCGTCGCAATTCTA +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHQDFCS*FIVAIL
Trigger: TAGAATTGCGACGATGAAGCAGGAACAGAAATCCTG...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCAGGATTTCTGTTCCTaGTTCATCGTCGCAATTCTA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHQDFCS*FIVAIL
Trigger: TAGAATTGCGACGATGAAGCAGGAACAGAAATCCTG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCTGCAGGTTTACATTCTaGACGGTGTCTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGCRFTF*TVSSKF
Trigger: GAATTTAGAAGACACCGTGCAGAATGTAAACCTGCA...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGCAGTGGACCTCAGGTaGTGCATCTCCATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIAVDLR*CISMSC
Trigger: GCAGCTCATGGAGATGCAGCACCTGAGGTCCACTGC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530997.7
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAGGTCTTGGAGTAGCTaGTGTCTCTCGACGACCATG +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMRSWSS*CLSTTM
Trigger: CATGGTCGTCGAGAGACAGCAGCTACTCCAAGACCT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTTGGACATCATTTCCTaGCTTTCCTGGTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYLDIIS*LSWSCS
Trigger: GGAACATGACCAGGAAAGGCAGGAAATGATGTCCAA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTGTCTGGAGATTTCTGTaGTCATCTCGGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFVWRFL*SSRLFL
Trigger: GAGAAAGAGCCGAGATGAGCACAGAAATCTCCAGAC...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTTCTTCAGCTCATCCTaGAACCTGAAAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTFFSSS*NLKTSA
Trigger: TGCAGAGGTTTTCAGGTTGCAGGATGAGCTGAAGAA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTAACTGCACCCTTCTCTaGTACTTCCAACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFNCTLL*YFQPLS
Trigger: ACTCAGTGGTTGGAAGTAGCAGAGAAGGGTGCAGTT...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATAACTGCACCCTTCTCTaGTACTTCCAACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYNCTLL*YFQPLS
Trigger: ACTCAGTGGTTGGAAGTAGCAGAGAAGGGTGCAGTT...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELILHHCV*LSVLAE
Trigger: CTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATGATGAACTTGGAAAGTaGCCTGCACCTAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYDELGK*PAPSKS
Trigger: AGACTTACTAGGTGCAGGGCACTTTCCAAGTTCATC...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGTCGGGCCTCATGCTaGTCCTGCTCCACCTCATCC +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRSRASC*SCSTSS
Trigger: GGATGAGGTGGAGCAGGACCAGCATGAGGCCCGACT...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATGTCTGCTGCAGCACTaGGGCCACCTCCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRCLLQH*GHLLQA
Trigger: AGCTTGGAGGAGGTGGCCCCAGTGCTGCAGCAGACA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTTGCTGATGAGGTTGTaGTACGTCGTCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFLLMRL*YVVHSH
Trigger: ATGAGAGTGGACGACGTACCACAACCTCATCAGCAA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAGACCCGAAAGCCAATaGTACTTGTCATTGCTGATG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRPESQ*YLSLLM
Trigger: CATCAGCAATGACAAGTACCATTGGCTTTCGGGTCT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAGACCCGAAAGCCAATaGTACTTGTCATTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRPESQ*YLSLLM
Trigger: CATCAGCAATGACAAGTACCATTGGCTTTCGGGTCT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGCATTCCGCCGCTCTATaGCCGCATGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLHSAAL*PHGDHP
Trigger: TGGATGATCACCATGCGGCCATAGAGCGGCGGAATG...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACATTCCGCCGCTCTATaGCCGCATGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKHSAAL*PHGDHP
Trigger: TGGATGATCACCATGCGGCCATAGAGCGGCGGAATG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATGGAGTTCATCTACTTaGTCTTGTAGTACCCTGCAC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRWSSST*SCSTLH
Trigger: GTGCAGGGTACTACAAGACCAAGTAGATGAACTCCA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCCCTCATGCCTGCAAGTaGCCTCATGATGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFPHACK*PHDVPP
Trigger: AGGAGGCACATCATGAGGCCACTTGCAGGCATGAGG...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGTCATCTTTGAGAAGGTaGTTTTCCTGTTGCACAATA +
Preference number: 4 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLSSLRR*FSCCTI
Trigger: TATTGTGCAACAGGAAAACCACCTTCTCAAAGATGA...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTCACGCTGCTGTTCCTaGAGGTCCTTCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSRCCS*RSFSSW
Trigger: CCAAGAGCTGAAGGACCTCCAGGAACAGCAGCGTGA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTCTTCCACCAACTGCTaGCGGAAGTGGCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSSTNC*RKWLAE
Trigger: CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GAGTTCTTCAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTGGAGTTCATCTACTTaGTCTTGTAGTACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: EFFNGSLSTLPCARYSSSWSSST*SCSTFS
Trigger: AGAAAAGGTACTACAAGACCAAGTAGATGAACTCCA...GCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATTCAATAACACAGTGTaGCATCGTGTTCGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRFNNTV*HRVRAQ
Trigger: TTGAGCCCGAACACGATGCCACACTGTGTTATTGAA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCAGCCCTGAAAACACATaGGACTCATTGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVLKPPFPAESLVGQISSSPENT*DSLILQ
Trigger: CTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCT...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674030.1
3UTR CAA 72 bp AACTTCTATCATTCGTTCCTCCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGGTGTGTTGGTTTCGGA +
Preference number: 4 (lower is better)
Translates to: NFYHSFLHDSYQ*FLVSLWCVGFG
Trigger: TCCGAAACCAACACACCACAGGGAAACCAGGAACAACTGGTAACTGTCATGGAGGAACGAATGATAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQCQTAP*VGPHAG
Trigger: ACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKPKRLS*SNVCCS
Trigger: GCTGCAGCAGACATTACTTCAGGACAACCTCTTGGG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ACTGGAAAGCACCCCAGGCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGCTAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: TGKHPRLSILRQKPSVRAKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...AGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGAGCAGTCTGGTTCTTaGAAGTGTTCTTCATTTGAC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGEQSGS*KCSSFD
Trigger: GTCAAATGAAGAACACTTTCAAGAACCAGACTGCTC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTGGAAGATCCACTCTGTaGAGCATTCAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGGRSTL*SIQVIW
Trigger: CCAGATGACTTGAATGCTTCACAGAGTGGATCTTCC...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGTTTCCATCGAGGCTaGAATCCAAGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCFHRG*NPRPSG
Trigger: TCCTGAAGGCCTTGGATTTCAGCCTCGATGGAAACA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTGTTTCCATCGAGGCTaGAATCCAAGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESACFHRG*NPRPSG
Trigger: TCCTGAAGGCCTTGGATTTCAGCCTCGATGGAAACA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTGTTTCCATCGAGGCTaGAATCCAAGGCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTCFHRG*NPRPSG
Trigger: TCCTGAAGGCCTTGGATTTCAGCCTCGATGGAAACA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTT +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASASLFL*PPDQLV
Trigger: AACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGC...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCTGCAAGTGGCCTCATaGTGTGCCTCCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQLQVAS*CASLST
Trigger: AGTGCTCAAGGAGGCACATCATGAGGCCACTTGCAG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCGCTCAAAGCTTGCTTaGGCCTGTGTCAGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQRSKLA*ACVSLA
Trigger: GGCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATGCCACATTTCTTCCTaGGATCCATTTAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRCHISS*DPFNVP
Trigger: AGGGACATTAAATGGATCTCAGGAAGAAATGTGGCA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTGCCACCAGCATTCTaGAGTTGCTTATGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLPPAF*SCLCKD
Trigger: GTCTTTACATAAGCAACTTCAGAATGCTGGTGGCAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTGGAGCCCTGATGGATaGGTAGCTATCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFWSPDG*VAISGA
Trigger: GGCCCCAGAGATAGCTACTCATCCATCAGGGCTCCA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTTCCTCATTCATCAGATaGTCCAACTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FIFELQSEATYVPVMLFFSSFIR*SNLSQD
Trigger: GTCCTGGGACAAGTTGGATCATCTGATGAATGAGGA...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGCTGCATCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMGAASP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGATGCAGCACC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGACCTGGCAACCACTCTaGAGCATTGAGAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMTWQPL*SIERGD
Trigger: ATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTGACTTCCTGTCTCTaGACAGAGCTCGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLTSCL*TELVPV
Trigger: TACAGGGACGAGCTCTGTTCAGAGACAGGAAGTCAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTGACTTCCTGTCTCTaGACAGAGCTCGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTLTSCL*TELVPV
Trigger: TACAGGGACGAGCTCTGTTCAGAGACAGGAAGTCAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAGAAAAACCCTCTACTaGAGCTTCAGACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRKTLY*SFRLLY
Trigger: ATAGAGGAGTCTGAAGCTTCAGTAGAGGGTTTTTCT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAGAAAAACCCTCTACTaGAGCTTCAGACTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRKTLY*SFRLLY
Trigger: ATAGAGGAGTCTGAAGCTTCAGTAGAGGGTTTTTCT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACACTCTTCCAGTGTCTaGTTGAGCTGGAGTATATTT +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRHSSSV*LSWSIF
Trigger: AAATATACTCCAGCTCAATCAGACACTGGAAGAGTG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTCCACTGAGTTCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGPLSSP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGAACTCAGTGG...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAGATTTGGGTTTGTCTaGTGTCAGCGGTTAATAACC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRRFGFV*CQRLIT
Trigger: GGTTATTAACCGCTGACATCAGACAAACCCAAATCT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTACAGTATTGTTCCCTaGGTTCTTGAGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVYSIVP*VLEATS
Trigger: TGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTACAGTATTGTTCCCTaGGTTCTTGAGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELIYSIVP*VLEATS
Trigger: TGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACTATTTGGCACTCCTTaGCCTCAGGTGGCATGCCAA +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKLFGTP*PQVACQ
Trigger: TTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTTTGCTTCATCAGTGTaGACTCCCAGTCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHFASSV*TPSPTK
Trigger: TTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCAAAATACAACAACCGTaGTCACATGCTAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVKIQQP*SHAKAS
Trigger: GCTGGCCTTAGCATGTGATCACGGTTGTTGTATTTT...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTCCCATAGCCCACAGTaGTCACCTTCTGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISHSPQ*SPSVGL
Trigger: GAGACCGACAGAAGGTGAGCACTGTGGGCTATGGGA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTACTCCTCACTGCGTTaGGTCTTCCAGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVYSSLR*VFQCSL
Trigger: CAGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCTTCATACTCCTCACTaGGTTGCGTCTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLHTPH*VASSSA
Trigger: AGCACTGGAAGACGCAACGCAGTGAGGAGTATGAAG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCTTCATACTCCTCACTaGGTTGCGTCTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSLHTPH*VASSSA
Trigger: AGCACTGGAAGACGCAACGCAGTGAGGAGTATGAAG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSMPSS*QVSSIL
Trigger: GAGAATACTGGACACCTGGCAGGAAGAGGGCATTGA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQPGCSQ*PLPARC
Trigger: ACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGACTCGTTCCAACAAATaGCGGATTTCAGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGTRSNK*RISALK
Trigger: CTTTAAGGCTGAAATCCGGCATTTGTTGGAACGAGT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGGTTCTAAACGCTGCTTaGCTGCCTGCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLVLNAA*LPAAGS
Trigger: AGATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAAC...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATCAAGTTCTAAACGCTaGTTGCCTGCCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKSSSKR*LPACCR
Trigger: CCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACTTGA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCGAGCACTCTGCCTTGTaGACGATATTCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESAEHSAL*TIFFQL
Trigger: GAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTC...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCATATTCAATGGATTaGATTCTTCAGAACCGAGCC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSYSMD*ILQNRA
Trigger: GGCTCGGTTCTGAAGAATGCAATCCATTGAATATGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTCCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTGCCTCCTTGAGCACTaGTGCTTGCCCCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSCLLEH*CLPLKF
Trigger: GAACTTCAGGGGCAAGCAGCAGTGCTCAAGGAGGCA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTCCCGCTCAAAGCTTaGTTGAGCCTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLPLKA*LSLCQS
Trigger: AGACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTTCCCGTTCCTCCAATaGACTGTTTCCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGFPFLQ*TVSWLF
Trigger: AAAGAGCCAGGAAACAGTGCATTGGAGGAACGGGAA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACAGGATTTCTGTTCCTaGTTCATCGTCGCAATTCTA +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRQDFCS*FIVAIL
Trigger: TAGAATTGCGACGATGAAGCAGGAACAGAAATCCTG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCTGGGGCCCAGCTCTTaGCACCAGCATTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILGPSS*HQHSEV
Trigger: AACTTCAGAATGCTGGTGGCAAGAGCTGGGCCCCAG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCAGGACAGCCTTTTCTaGTGGTTATGGAGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTQDSLF*WLWSPD
Trigger: ATCAGGGCTCCATAACCAGCAGAAAAGGCTGTCCTG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGTCTCTCGACGACCATaGTGTTCAAATGTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGVSRRP*CSNVLC
Trigger: ACAAAGAACATTTGAACAGCATGGTCGTCGAGAGAC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTCAGACAGCAGGCTTTaGTGGGTTTCAGATACATTT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYSDSRL*WVSDTF
Trigger: AAATGTATCTGAAACCCAGCAAAGCCTGCTGTCTGA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGTTCCCTTTTGTGACTaGTCTTCAGCTCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGVPFCD*SSAQVS
Trigger: AGATACTTGAGCTGAAGAGCAGTCACAAAAGGGAAC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGCTCTTTCTCGATCTaGTGTCTCACAGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMGSFSI*CLTGRF
Trigger: AAAGCGACCTGTGAGACAGCAGATCGAGAAAGAGCC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAGGTCACTTAGGACATaGCGCCTGGTCACACCTTCT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVRSLRT*RLVTPS
Trigger: AGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCTGCCCATAAAGCAGTaGTTGATTTTGCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHLPIKQ*LILLFT
Trigger: GGTGAACAGCAAAATCAAGCACTGCTTTATGGGCAG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACAAATCTAAGCTTAAGTaGAGGCTTCTAAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYKSKLK*RLLKSR
Trigger: TCTGCTTTTTAGAAGCCTGCACTTAAGCTTAGATTT...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTCCTCCACGGACTCTTaGAACTCGGGCAAGGACCTT +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISSTDS*NSGKDL
Trigger: AAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTTCCAAAACCTTAACTaGCCTTCCGCTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASFQNLN*PSASYS
Trigger: GGAGTATGAAGCGGAAGGCCAGTTAAGGTTTTGGAA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSIQS*GGEDPL
Trigger: GAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESASSIQS*GGEDPL
Trigger: GAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGGCCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVAFRIS*LFSMPS
Trigger: AGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGC...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFSSSSD*SSSTWS
Trigger: AGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATGGCTCTTTTTCCTTCTaGCATAGCATTTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHGSFSF*HSISVR
Trigger: TCTAACAGAAATGCTATGCCAGAAGGAAAAAGAGCC...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATGAGAAGACACTAAAGTaGAGGACTGCACTTTACAAC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYEKTLK*RTALYN
Trigger: GTTGTAAAGTGCAGTCCTCCACTTTAGTGTCTTCTC...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCT +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGAWEED*IPTDGP
Trigger: AGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGC...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGGACAGGCTTGCTGCTaGAGCAGCTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQGQACC*SSCKSQ
Trigger: TTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVSSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTCCTGGTTTCCCTGTaGTGTGTTGGTTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTFLVSL*CVGFGG
Trigger: ACCTCCGAAACCAACACACCACAGGGAAACCAGGAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTGTTACCAGTTGTTCCTaGTTTCCCTGTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGVTSCS*FPCGVL
Trigger: CAACACACCACAGGGAAACCAGGAACAACTGGTAAC...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTCACGCTGCTGTTCCTaGAGGTCCTTCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISRCCS*RSFSSW
Trigger: CCAAGAGCTGAAGGACCTCCAGGAACAGCAGCGTGA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAGCATCTCTCTCTCCTaGGTCAGGACCAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSISLS*VRTREV
Trigger: AACTTCTCTGGTCCTGACCCAGGAGAGAGAGATGCT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCAGCATCTCTCTCTCCTaGGTCAGGACCAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSISLS*VRTREV
Trigger: AACTTCTCTGGTCCTGACCCAGGAGAGAGAGATGCT...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCAGCATCTCTCTCTCCTaGGTCAGGACCAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSSISLS*VRTREV
Trigger: AACTTCTCTGGTCCTGACCCAGGAGAGAGAGATGCT...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAGGTCTTCCAGGTCTTaGAGTAGCTGCTGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVRSSRS*SSCCLS
Trigger: CGAGAGACAGCAGCTACTCCAAGACCTGGAAGACCT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTTTAGGACATGCCGCCTaGTCACACCTTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLLGHAA*SHLLLA
Trigger: AGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAA...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTTAGGACATGCCGCCTaGTCACACCTTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESALGHAA*SHLLLA
Trigger: AGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGACAACAGCTTATATTTaGGAGAAGCCTCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGTTAYI*EKPQGF
Trigger: GAATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCCTTTTGTAAATAGATaGGCTTGGCCCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHPFVNR*AWPSRN
Trigger: ATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCCTTTTGTAAATAGATaGGCTTGGCCCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASPFVNR*AWPSRN
Trigger: ATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 72 bp AAAGTTTTGATCTTGAGCATGAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGGTGGCATGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: KVLILSMSGKSY*ALLDLRWHAND
Trigger: ATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACTCATGCTCAAGATCAAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 72 bp ACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTaGTTCCCGTTCCTCCAATGCACTGTTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TTFQFFFQIKLL*FPFLQCTVSWL
Trigger: GAGCCAGGAAACAGTGCATTGGAGGAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCGAGCAGTCTGGTTCTTaGAAGTGTTCTTCATTTGAC +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVEQSGS*KCSSFD
Trigger: GTCAAATGAAGAACACTTTCAAGAACCAGACTGCTC...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGAAGATCCACTCTGTaGAGCATTCAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMGRSTL*SIQVIW
Trigger: CCAGATGACTTGAATGCTTCACAGAGTGGATCTTCC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAACTGCTCTAGTTCCTaGGTCAAGCCTCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLNCSSS*VKPLTF
Trigger: GAAGGTGAGAGGCTTGACTCAGGAACTAGAGCAGTT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCTGCCACATTTCTTCCTaGGATCCATTTAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: LVLKPPFPAESLVGQISSCHISS*DPFNVP
Trigger: AGGGACATTAAATGGATCTCAGGAAGAAATGTGGCA...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTTGCCACCAGCATTCTaGAGTTGCTTATGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASLPPAF*SCLCKD
Trigger: GTCTTTACATAAGCAACTTCAGAATGCTGGTGGCAA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCTGGTTATGGAGCCCTaGTGGATGAGTAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLVMEP*WMSSYL
Trigger: GAGATAGCTACTCATCCATCAGGGCTCCATAACCAG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGGGTGCTGCATCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLGAASP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGATGCAGCACC...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530997.7
CDS-3UTR TCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAACTGGGCTTCTATTTaGGAGGTTCTTCTATTACAC +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYNWASI*EVLLLH
Trigger: GTGTAATAGAAGAACCTCTCAAATAGAAGCCCAGTT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTTCACAGGTCGCTTTGTaGATGTTCTCCATGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLSQVAL*MFSMAR
Trigger: TCTAGCCATGGAGAACATTCACAAAGCGACCTGTGA...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCCTTTGGTTTGGCTATaGCCTCAAAGGAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSPLVWL*PQRRCR
Trigger: TCTACACCTCCTTTGAGGTCATAGCCAAACCAAAGG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTACAGTATTGTTCCCTaGGTTCTTGAGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGYSIVP*VLEATS
Trigger: TGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTTGATTCCCTTTTCTTaGAACGAAGATCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTLIPFS*NEDPIF
Trigger: GAAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTGCCTTGGAAGCCTATaGCTTCATGATCTATTCATG +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASCLGSL*LHDLFM
Trigger: CATGAATAGATCATGAAGTCATAGGCTTCCAAGGCA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCACTTAGCCTTGCCTTaGCTGGAAATACCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHHLALP*LEIPLR
Trigger: TCTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTCAAAATGTACCCTaGCCAAGAGGTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMGQNVP*PRGCPE
Trigger: TTCAGGACAACCTCTTGGGCAGGGTACATTTTGACC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGGTCAAAATGTACCCTaGCCAAGAGGTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSGQNVP*PRGCPE
Trigger: TTCAGGACAACCTCTTGGGCAGGGTACATTTTGACC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTCTTCCAGTGCTCACTaGAGTCACCGGCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLSSSAH*SHRLGC
Trigger: ACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAGA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATACTCGTTCCAACAAATaGCGGATTTCAGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHTRSNK*RISALK
Trigger: CTTTAAGGCTGAAATCCGGCATTTGTTGGAACGAGT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATCATATTCAATGGATTaGATTCTTCAGAACCGAGCC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSYSMD*ILQNRA
Trigger: GGCTCGGTTCTGAAGAATGCAATCCATTGAATATGA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTCATGTTCTCCTGTaGCTTCTTGCAGCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLHVLL*LLAADH
Trigger: GTGGTCAGCTGCAAGAAGGCACAGGAGAACATGAAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTCGTTCTCATGCCTTTaGTTCATGTTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSSFSCL*FMFSCA
Trigger: GGCACAGGAGAACATGAAGCAAAGGCATGAGAACGA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTCTCCTCCTCATGCCTaGAAGTGGCCTCATGATGTG +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQSPPHA*KWPHDV
Trigger: CACATCATGAGGCCACTTGCAGGCATGAGGAGGAGA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGAGCTCCATCTCATGTTaGAGCCTCAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQSSISC*SLSFSC
Trigger: GCAGGAGAAGCTGAGGCTGCAACATGAGATGGAGCT...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCAACCATCTTCTGAACTaGAGCATTTTCTTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGNHLLN*SIFLFY
Trigger: GTAAAACAAGAAAATGCTGCAGTTCAGAAGATGGTT...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTTGCAGGTTTACATTCTaGACGGTGTCTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTCRFTF*TVSSKF
Trigger: GAATTTAGAAGACACCGTGCAGAATGTAAACCTGCA...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCTGGGGCCCAGCTCTTaGCACCAGCATTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLGPSS*HQHSEV
Trigger: AACTTCAGAATGCTGGTGGCAAGAGCTGGGCCCCAG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCATCGGACAGGCTTGCTaGTGGAGCAGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFIGQAC*WSSCKS
Trigger: GGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGAT...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAAAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGTCTGGAGATTTCTGTaGTCATCTCGGCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSVWRFL*SSRLFL
Trigger: GAGAAAGAGCCGAGATGAGCACAGAAATCTCCAGAC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCTCTATTTCAGTAAAGTaGACAAATATGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGSISVK*TNMSVP
Trigger: GGGTACACTCATATTTGTGCACTTTACTGAAATAGA...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGATGAACTTGGAAAGTaGCCTGCACCTAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKDELGK*PAPSKS
Trigger: AGACTTACTAGGTGCAGGGCACTTTCCAAGTTCATC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGCGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTTCCAAAACCTTAACTaGCCTTCCGCTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGFQNLN*PSASYS
Trigger: GGAGTATGAAGCGGAAGGCCAGTTAAGGTTTTGGAA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCATACTGCTCACAGATaGAGACCAGCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLHTAHR*RPASSG
Trigger: ACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACATACTGCTCACAGATaGAGACCAGCTTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKHTAHR*RPASSG
Trigger: ACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCATCGAAAGACTGCATaGAAAGGTGCCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGHRKTA*KGAFLV
Trigger: AACTAAAAAGGCACCTTTCCATGCAGTCTTTCGATG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCTCTCCACAGATGCATaGCCCATCCCATCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLSTDA*PIPSSR
Trigger: CCTGGATGATGGGATGGGCCATGCATCTGTGGAGAG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTGGAGTTCATCTACTTaGTCTTGTAGTACCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKWSSST*SCSTLH
Trigger: GTGCAGGGTACTACAAGACCAAGTAGATGAACTCCA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTTCCTGTTGCACAATATaGGTCTGTATTTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: AASSHTISGRELHPSLLLSCCTI*VCILTS
Trigger: TGAAGTTAAAATACAGACCCATATTGTGCAACAGGA...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCATCTTTGAGAAGGTaGTTTTCCTGTTGCACAATA +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSSLRR*FSCCTI
Trigger: TATTGTGCAACAGGAAAACCACCTTCTCAAAGATGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGACAGCCTTTTCTGCTaGTTATGGAGCCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLDSLFC*LWSPDG
Trigger: TCCATCAGGGCTCCATAACCAGCAGAAAAGGCTGTC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTCTGTACCATGGTCTaGAGCCTCTCATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMFCTMV*SLSFSC
Trigger: GCAAGAGAATGAGAGGCTCCAGACCATGGTACAGAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSAWEED*IPTDGP
Trigger: AGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAATTTTTCTTGCTCTGTaGGATTCATGGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRIFLAL*DSWYLM
Trigger: CATCAGGTACCATGAATCCCACAGAGCAAGAAAAAT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTCCTCCTGCAGGTGCTaGTTTATCCTTTCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISSCRC*FILSAC
Trigger: GCAGGCAGAAAGGATAAACCAGCACCTGCAGGAGGA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCCTGGTTTCCCTGTaGTGTGTTGGTTTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLFLVSL*CVGFGG
Trigger: ACCTCCGAAACCAACACACCACAGGGAAACCAGGAA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTCTCAAATTCCCACTaGGATTTCTCCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTFSNSH*DFSSRC
Trigger: GCAGCGTGAGGAGAAATCCCAGTGGGAATTTGAGAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTCAGCTCAAGTATCTaGTCAGACAGCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSFSSSI*SDSRLC
Trigger: GCAAAGCCTGCTGTCTGACCAGATACTTGAGCTGAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTGTGAATGTTCTCCATaGCTAGAAGCTTGGACATCA +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVCECSP*LEAWTS
Trigger: TGATGTCCAAGCTTCTAGCCATGGAGAACATTCACA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGAAGTCAATGGCGCTaGTGTCAGATTCCTAACTAT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHRSQWR*CQIPNY
Trigger: ATAGTTAGGAATCTGACACCAGCGCCATTGACTTCT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCAACTGCTGGCGGAAGTaGCTAGCAGAGATTATAATT +
Preference number: 4 (lower is better)
Translates to: LVLKPPFPAESLVGQISSNCWRK*LAEIII
Trigger: AATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTT...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTGTAAATAGATGGGCTTaGCCCTCCAGGAATATATCA +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELIVNRWA*PSRNIS
Trigger: TGATATATTCCTGGAGGGCCAAGCCCATCTATTTAC...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
3UTR CAA 72 bp AGGCCCTACAGTAGTTCAGGAAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGGCAACCTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: RPYSSSGRQFTV*FPEFLRQPQVN
Trigger: ATTTACTTGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTAAACTGTCTTCCTGAACTACTGTAGGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 72 bp GGCTTTCTGACAAGAGCTGTGCAAAAATTCAAAGGTTaGCTTCATCAGTGTGAACTCCCAGTCCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: GFLTRAVQKFKG*LHQCELPVPQK
Trigger: TTTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAACCTTTGAATTTTTGCACAGCTCTTGTCAGAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLTYLG*ASSEQS
Trigger: AGACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMASLFL*PPDQLV
Trigger: AACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCACTGCTGCTTGCCCCTaGAGTTCAGCAATTTCATTT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESATAACP*SSAISF
Trigger: AAATGAAATTGCTGAACTTCAGGGGCAAGCAGCAGT...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCTGGTTATGGAGCCCTaGTGGATGAGTAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSLVMEP*WMSSYL
Trigger: GAGATAGCTACTCATCCATCAGGGCTCCATAACCAG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTTTCACACCTCTCAGTaGCTTTCTGACAATCAGACT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKFHTSQ*LSDNQT
Trigger: AGTCTGATTGTCAGAAAGTCACTGAGAGGTGTGAAA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCACCACTCTGAAGCATTaGGAGAGGAGATGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSTTLKH*ERRCCL
Trigger: CAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCAGACTCCTCTATTTTaGCTTCCTGTCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSQTPLF*LPVSEQ
Trigger: CTGTTCAGAGACAGGAAGTCAAAATAGAGGAGTCTG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTTCTCAATCTTGCCTTaGAGTCTCAAAACCAGAACA +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFFSILP*SLKTRT
Trigger: TGTTCTGGTTTTGAGACTTCAAGGCAAGATTGAGAA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTGGACCACGCTTTCCTaGAGCTTCTCAATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQWTTLS*SFSILP
Trigger: AGGCAAGATTGAGAAGCTTCAGGAAAGCGTGGTCCA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGCCACTGAGTTCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLPLSSP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGAACTCAGTGG...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTGCAGAGTTGTTCTTTaGGCTGATTCACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVCRVVL*ADSLSL
Trigger: AAGAGAAAGTGAATCAGCTCAAAGAACAACTCTGCA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTTTTGCTTCATCAGTGTaGACTCCCAGTCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLFASSV*TPSPTK
Trigger: TTTTGTGGGACTGGGAGTTCACACTGATGAAGCAAA...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATGGTTAATTAGGCTTTaGCTTGGTTTTTGGCATTAC +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRWLIRL*LGFWHY
Trigger: GTAATGCCAAAAACCAAGTCAAAGCCTAATTAACCA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTACTCCTCACTGCGTTaGGTCTTCCAGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLYSSLR*VFQCSL
Trigger: CAGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCTTCACAAACTTCTTaGAGTTTCTCTTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSSQTS*SFSSIQ
Trigger: CTGGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTATTCTCTCCACAGATaGATGGCCCATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLYSLHR*MAHPII
Trigger: GATGATGGGATGGGCCATGCATCTGTGGAGAGAATA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGCCTGCTGCAGGATCTaGTCTCTCTCTTTTCGGAGT +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRACCRI*SLSFRS
Trigger: ACTCCGAAAAGAGAGAGAGCAGATCCTGCAGCAGGC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGGTTCTAAACGCTGCTTaGCTGCCTGCTGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLVLNAA*LPAAGS
Trigger: AGATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAAC...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTCGTTCTCATGCCTTTaGTTCATGTTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFSFSCL*FMFSCA
Trigger: GGCACAGGAGAACATGAAGCAAAGGCATGAGAACGA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTAGATCGGGACATCTGTaGAGCTGTTTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLRSGHL*SCFIFS
Trigger: GGAGAAAATGAAACAGCTGCACAGATGTCCCGATCT...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTGCAGGTTTACATTCTaGACGGTGTCTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHCRFTF*TVSSKF
Trigger: GAATTTAGAAGACACCGTGCAGAATGTAAACCTGCA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 4 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCAGTTCCTCCTGCAGGTaGTGGTTTATCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSSSSCR*WFILSA
Trigger: GGCAGAAAGGATAAACCAGCACCTGCAGGAGGAACT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTGGACATCATTTCCTaGCTTTCCTGGTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMLDIIS*LSWSCS
Trigger: GGAACATGACCAGGAAAGGCAGGAAATGATGTCCAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCGGCTCTTTCTCGATCTaGTGTCTCACAGGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSGSFSI*CLTGRF
Trigger: AAAGCGACCTGTGAGACAGCAGATCGAGAAAGAGCC...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTGGAGATGTTGCCTGCTaGATTTCCTTTATTTTACTC +
Preference number: 4 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFGDVAC*ISFILL
Trigger: GAGTAAAATAAAGGAAATGCAGCAGGCAACATCTCC...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTTTGCTGTAAAAACTaGTCTGTTTGTTCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFCCKN*SVCSAV
Trigger: TACTGCGGAACAAACAGAGCAGTTTTTACAGCAAAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTGCTTCGTTCGGTTTTaGTGTAAAAACTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASCFVRF*CKNCSV
Trigger: AACAGAGCAGTTTTTACAGCAAAACCGAACGAAGCA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTCTTCAGCTCATCCTaGAACCTGAAAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMFFSSS*NLKTSA
Trigger: TGCAGAGGTTTTCAGGTTGCAGGATGAGCTGAAGAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAGGTACTGGTTTTCTTaGTTACATTCCTCTATGACA +
Preference number: 4 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGRYWFS*LHSSMT
Trigger: TGTCATAGAGGAATGTAAGCAAGAAAACCAGTACCT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCTTCACCATTGCGTCTaGCTTAGTGTTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLHHCV*LSVLAE
Trigger: CTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTQVLHH*VCLSVL
Trigger: AAGAACACTAAGGCAGACGCAATGGTGAAGGACTTG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCAAGTCCTTCACCATTaGGTCTGCCTTAGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSQVLHH*VCLSVL
Trigger: AAGAACACTAAGGCAGACGCAATGGTGAAGGACTTG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACAAAAATTCAAAGGTTTaGTTCATCAGTGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: GKSYLALLDLRWHANDYHKNSKV*FISVNS
Trigger: GGAGTTCACACTGATGAAGCAAACCTTTGAATTTTT...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCTTACTAGAAATGTCTaGACCACAGAAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SGKSYLALLDLRWHANDYLTRNV*TTEERS
Trigger: AGATCTTTCTTCTGTGGTGCAGACATTTCTAGTAAG...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTCAACTCACAACAAATaGCGGATTTCAGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSTHNK*RISALK
Trigger: CTTTAAGGCTGAAATCCGGCATTTGTTGTGAGTTGA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCGCTTCTTCATCCAGTaGCTCAATCACCGTCACTTC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSRFFIQ*LNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTCCAAAACCTTAACTaGCCTTCCGCTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSFQNLN*PSASYS
Trigger: GGAGTATGAAGCGGAAGGCCAGTTAAGGTTTTGGAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCCATCGAAAGACTGCATaGAAAGGTGCCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVHRKTA*KGAFLV
Trigger: AACTAAAAAGGCACCTTTCCATGCAGTCTTTCGATG...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGGAGTTCATCTACTTaGTCTTGTAGTACCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMWSSST*SCSTLH
Trigger: GTGCAGGGTACTACAAGACCAAGTAGATGAACTCCA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSSSD*SSSTWS
Trigger: AGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTGAGAAGACACTAAAGTaGAGGACTGCACTTTACAAC +
Preference number: 4 (lower is better)
Translates to: FIFELQSEATYVPVMLFFEKTLK*RTALYN
Trigger: GTTGTAAAGTGCAGTCCTCCACTTTAGTGTCTTCTC...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTCCTGTTGCACAATATaGGTCTGTATTTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHSCCTI*VCILTS
Trigger: TGAAGTTAAAATACAGACCCATATTGTGCAACAGGA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGCTTGGGAAGAAGATTaGATTCCAACTGACGGACCT +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLAWEED*IPTDGP
Trigger: AGGTCCGTCAGTTGGAATCCAATCTTCTTCCCAAGC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTTCCCTGTGGTGTGTTaGTTTCGGAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVFPVVC*FRRSCF
Trigger: AAAACAGGACCTCCGAAACCAACACACCACAGGGAA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGGTTACCAGTTGTTCCTaGTTTCCCTGTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLVTSCS*FPCGVL
Trigger: CAACACACCACAGGGAAACCAGGAACAACTGGTAAC...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTTCAGCTCAAGTATCTaGTCAGACAGCAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVFSSSI*SDSRLC
Trigger: GCAAAGCCTGCTGTCTGACCAGATACTTGAGCTGAA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCCATGGCTAGAAGCTTaGACATCATTTCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESAPWLEA*TSFPAF
Trigger: AAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAACCAGGTTCTCTAAACTaGCTTCCCATAAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKPGSLN*LPISSS
Trigger: ACTGCTGCTTATGGGAAGCCAGTTTAGAGAACCTGG...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTTGATTCTGTACTCTTaGCCTTTCTTGATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASLILYS*PFLMCL
Trigger: CAGACACATCAAGAAAGGCCAAGAGTACAGAATCAA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTCTAACTCTGCTATGGTaGCCTGATGCTGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGLTLLW*PDAENV
Trigger: AACATTTTCAGCATCAGGCCACCATAGCAGAGTTAG...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTCTATTTACTCCAAAGTaGTTTGTTCAGTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELILFTPK*FVQCFP
Trigger: GGGAAAGCACTGAACAAACCACTTTGGAGTAAATAG...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAACTGCTGGCGGAAGTaGCTAGCAGAGATTATAATT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKNCWRK*LAEIII
Trigger: AATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTGAGCAGTCTGGTTCTTaGAAGTGTTCTTCATTTGAC +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLEQSGS*KCSSFD
Trigger: GTCAAATGAAGAACACTTTCAAGAACCAGACTGCTC...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGGAAGATCCACTCTGTaGAGCATTCAAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQGRSTL*SIQVIW
Trigger: CCAGATGACTTGAATGCTTCACAGAGTGGATCTTCC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTTTCTCTGACCACCTaGTCAACTCGTTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMFSLTT*STRSNK
Trigger: TTTGTTGGAACGAGTTGATCAGGTGGTCAGAGAAAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTTTCTCTGACCACCTaGTCAACTCGTTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTFSLTT*STRSNK
Trigger: TTTGTTGGAACGAGTTGATCAGGTGGTCAGAGAAAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAAGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTT +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKASLFL*PPDQLV
Trigger: AACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGC...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGGCCATTAAAGACTTaGGCTTCTCGGCCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRRPLKT*ASRPCP
Trigger: TGGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCT...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCTTTCATCTGTTCAATaGCCAGCTCTGCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQLSSVQ*PALPQC
Trigger: GCATTGAGGCAGAGCTGGTCATTGAACAGATGAAAG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTGCCACATTTCTTCCTaGGATCCATTTAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESACHISS*DPFNVP
Trigger: AGGGACATTAAATGGATCTCAGGAAGAAATGTGGCA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTTAAGCTCGCACTCTaGTGTTCCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLFKLAL*CSQDFC
Trigger: ACAGAAATCCTGGGAACATCAGAGTGCGAGCTTAAA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTTGCCACCAGCATTCTaGAGTTGCTTATGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESALPPAF*SCLCKD
Trigger: GTCTTTACATAAGCAACTTCAGAATGCTGGTGGCAA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTGGTTATGGAGCCCTaGTGGATGAGTAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLVMEP*WMSSYL
Trigger: GAGATAGCTACTCATCCATCAGGGCTCCATAACCAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTCCTCATTCATCAGATaGTCCAACTTGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSSSFIR*SNLSQD
Trigger: GTCCTGGGACAAGTTGGATCATCTGATGAATGAGGA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTCATTCGTTCCTCCATaGCAGTTACCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSFVPP*QLPVVP
Trigger: AGGAACAACTGGTAACTGTCATGGAGGAACGAATGA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATCATTCGTTCCTCCATaGCAGTTACCAGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKSFVPP*QLPVVP
Trigger: AGGAACAACTGGTAACTGTCATGGAGGAACGAATGA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTTCACACCTCTCAGTaGCTTTCTGACAATCAGACT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMFHTSQ*LSDNQT
Trigger: AGTCTGATTGTCAGAAAGTCACTGAGAGGTGTGAAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTATTCTCAGCTCTTCCTaGAGGCAGTCATTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIILSSS*RQSFSR
Trigger: CCGAGAAAATGACTGCCTTCAGGAAGAGCTGAGAAT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCACTCTTCCAGTGTCTaGTTGAGCTGGAGTATATTT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMHSSSV*LSWSIF
Trigger: AAATATACTCCAGCTCAATCAGACACTGGAAGAGTG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCATTCCTCTATGACATaGTGTACACTCCTAACCCTG +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVHSSMT*CTLLTL
Trigger: CAGGGTTAGGAGTGTACATCATGTCATAGAGGAATG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCCTCCTTTTCTCCGTaGGAAAGTACATCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSFSP*ESTSFC
Trigger: GCAAAAAGATGTACTTTCTCACGGAGAAAAGGAGGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCCTCCTTTTCTCCGTaGGAAAGTACATCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESASSFSP*ESTSFC
Trigger: GCAAAAAGATGTACTTTCTCACGGAGAAAAGGAGGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCCACTGAGTTCTCCATaGGCTGCTCATCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIPLSSP*AAHPVL
Trigger: TAAAACTGGATGAGCAGCTCATGGAGAACTCAGTGG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCCTTTGGTTTGGCTATaGCCTCAAAGGAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIPLVWL*PQRRCR
Trigger: TCTACACCTCCTTTGAGGTCATAGCCAAACCAAAGG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGAGAGTACAATAGGATaGGAGAGGTGGGTTTTACTA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSESTIG*ERWVLL
Trigger: TAGTAAAACCCACCTCTCTCATCCTATTGTACTCTC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATTGGTTAATTAGGCTTTaGCTTGGTTTTTGGCATTAC +
Preference number: 4 (lower is better)
Translates to: LLFIMAHFIFELQSEATYWLIRL*LGFWHY
Trigger: GTAATGCCAAAAACCAAGTCAAAGCCTAATTAACCA...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCTTCATACTCCTCACTaGGTTGCGTCTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLHTPH*VASSSA
Trigger: AGCACTGGAAGACGCAACGCAGTGAGGAGTATGAAG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTTCTTCACAAACTTCTTaGAGTTTCTCTTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: LHHCVCLSVLAELFFELISSQTS*SFSSIQ
Trigger: CTGGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGA...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTTCTGTAAACCATACTaGTCACAGATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLFCKPY*SQMETS
Trigger: GCTGGTCTCCATCTGTGAGCAGTATGGTTTACAGAA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCTGTAAACCATACTaGTCACAGATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLFCKPY*SQMETS
Trigger: GCTGGTCTCCATCTGTGAGCAGTATGGTTTACAGAA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCGACTGCATGGAAAGGTaGCTTTTTAGTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: LVLKPPFPAESLVGQISSDCMER*LFSCLY
Trigger: ATATAGACAACTAAAAAGGCACCTTTCCATGCAGTC...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTC +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFSMPSS*QVSSIL
Trigger: GAGAATACTGGACACCTGGCAGGAAGAGGGCATTGA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATGCGTTTCGTTCTCATaGCTTTGCTTCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKCVSFS*LCFMFS
Trigger: GGAGAACATGAAGCAAAGGCATGAGAACGAAACGCA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGCFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTTCCCGTTCCTCCAATaGACTGTTTCCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSFPFLQ*TVSWLF
Trigger: AAAGAGCCAGGAAACAGTGCATTGGAGGAACGGGAA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCAGGATTTCTGTTCCTaGTTCATCGTCGCAATTCTA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMQDFCS*FIVAIL
Trigger: TAGAATTGCGACGATGAAGCAGGAACAGAAATCCTG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGCATCTCCATGAGCTaGTCATCCAGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCISMS*SSSFTC
Trigger: ACAAGTAAAACTGGATGAGCAGCTCATGGAGATGCA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTGCATCTCCATGAGCTaGTCATCCAGTTTTACTTGT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSCISMS*SSSFTC
Trigger: ACAAGTAAAACTGGATGAGCAGCTCATGGAGATGCA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530997.7
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTTGGACATCATTTCCTaGCTTTCCTGGTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLDIIS*LSWSCS
Trigger: GGAACATGACCAGGAAAGGCAGGAAATGATGTCCAA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGGTCACACCTTCTACTTaGTTCGTTCGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVVTPST*FVRFCC
Trigger: ACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGAC...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTTCTTCAGCTCATCCTaGAACCTGAAAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLFFSSS*NLKTSA
Trigger: TGCAGAGGTTTTCAGGTTGCAGGATGAGCTGAAGAA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCGTAATTTTTCTTCTCTaGTGTTTTCTGTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASVIFLL*CFLSLF
Trigger: GAACAGCGACAGAAAACAGCAGAGAAGAAAAATTAC...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGCTGCCCATAAAGCAGTaGTTGATTTTGCTGTTCACC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLLPIKQ*LILLFT
Trigger: GGTGAACAGCAAAATCAAGCACTGCTTTATGGGCAG...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCTTACTAGAAATGTCTaGACCACAGAAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHLTRNV*TTEERS
Trigger: AGATCTTTCTTCTGTGGTGCAGACATTTCTAGTAAG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTCCAAGCTCAACATGTaGCAAAGGTCGGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLSKLNM*QRSVSS
Trigger: GGAACTCACCGACCTTTGCCACATGTTGAGCTTGGA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAGACCCGAAAGCCAATaGTACTTGTCATTGCTGATG +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLRPESQ*YLSLLM
Trigger: CATCAGCAATGACAAGTACCATTGGCTTTCGGGTCT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGAGAAGACACTAAAGTaGAGGACTGCACTTTACAAC +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMEKTLK*RTALYN
Trigger: GTTGTAAAGTGCAGTCCTCCACTTTAGTGTCTTCTC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAAGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGTTACCAGTTGTTCCTaGTTTCCCTGTGGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQVTSCS*FPCGVL
Trigger: CAACACACCACAGGGAAACCAGGAACAACTGGTAAC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTTCTCAAATTCCCACTaGGATTTCTCCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQFSNSH*DFSSRC
Trigger: GCAGCGTGAGGAGAAATCCCAGTGGGAATTTGAGAA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAGAGCTTTCAACAACTaGGCATTTTCAACATACAAG +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHRAFNN*AFSTYK
Trigger: CTTGTATGTTGAAAATGCCCAGTTGTTGAAAGCTCT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGACAGAAAACCTACATaGTCTGCTTATCCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKDRKPT*SAYPSF
Trigger: AAAAGAGGGATAAGCAGACCATGTAGGTTTTCTGTC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCGATCTTGAGCATGAGTaGAAAGTCCTATTTGGCACT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTDLEHE*KVLFGT
Trigger: AGTGCCAAATAGGACTTTCCACTCATGCTCAAGATC...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGGATCTTGAGCATGAGTaGAAAGTCCTATTTGGCACT +
Preference number: 4 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEDLEHE*KVLFGT
Trigger: AGTGCCAAATAGGACTTTCCACTCATGCTCAAGATC...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGTAAATAGATGGGCTTaGCCCTCCAGGAATATATCA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSVNRWA*PSRNIS
Trigger: TGATATATTCCTGGAGGGCCAAGCCCATCTATTTAC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCCTTTTGTAAATAGATaGGCTTGGCCCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLPFVNR*AWPSRN
Trigger: ATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGAGCAGTCTGGTTCTTaGAAGTGTTCTTCATTTGAC +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLEQSGS*KCSSFD
Trigger: GTCAAATGAAGAACACTTTCAAGAACCAGACTGCTC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILTYLG*ASSEQS
Trigger: AGACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCAACATATGTCCCTGTaGTGTTGTTCTTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSQHMSL*CCSFIC
Trigger: ACAGATGAAAGAACAACATCACAGGGACATATGTTG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCACTGCTGCTTGCCCCTaGAGTTCAGCAATTTCATTT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSTAACP*SSAISF
Trigger: AAATGAAATTGCTGAACTTCAGGGGCAAGCAGCAGT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTTTAAGCTCGCACTCTaGTGTTCCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIFKLAL*CSQDFC
Trigger: ACAGAAATCCTGGGAACATCAGAGTGCGAGCTTAAA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTTTCACACCTCTCAGTaGCTTTCTGACAATCAGACT +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLFHTSQ*LSDNQT
Trigger: AGTCTGATTGTCAGAAAGTCACTGAGAGGTGTGAAA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAGATTTGGGTTTGTCTaGTGTCAGCGGTTAATAACC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLRFGFV*CQRLIT
Trigger: GGTTATTAACCGCTGACATCAGACAAACCCAAATCT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTACAGTATTGTTCCCTaGGTTCTTGAGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQYSIVP*VLEATS
Trigger: TGAGGTTGCCTCAAGAACTCAGGGAACAATACTGTA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGAACTCAGGGCTTTCTaGCAAGAGCTGTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQELRAF*QELCKN
Trigger: ATTTTTGCACAGCTCTTGTCAGAAAGCCCTGAGTTC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCAAAATACAACAACCGTaGTCACATGCTAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSKIQQP*SHAKAS
Trigger: GCTGGCCTTAGCATGTGATCACGGTTGTTGTATTTT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTGCCTTGGAAGCCTATaGCTTCATGATCTATTCATG +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFCLGSL*LHDLFM
Trigger: CATGAATAGATCATGAAGTCATAGGCTTCCAAGGCA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTCCCGTTCCTCCAATaGACTGTTTCCTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLFPFLQ*TVSWLF
Trigger: AAAGAGCCAGGAAACAGTGCATTGGAGGAACGGGAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTGCAGGTTTACATTCTaGACGGTGTCTTCTAAATTC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTCRFTF*TVSSKF
Trigger: GAATTTAGAAGACACCGTGCAGAATGTAAACCTGCA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 4 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTTGCTTCGTTCGGTTTTaGTGTAAAAACTGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLCFVRF*CKNCSV
Trigger: AACAGAGCAGTTTTTACAGCAAAACCGAACGAAGCA...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCGTCACACCTTCTACTTaGTTCGTTCGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSVTPST*FVRFCC
Trigger: ACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGAC...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGAAGCTTCTCAATCTTaGCTTGAAGTCTCAAAACCA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMEASQS*LEVSKP
Trigger: TGGTTTTGAGACTTCAAGGCAAGATTGAGAAGCTTC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGAAGCTTCTCAATCTTaGCTTGAAGTCTCAAAACCA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSEASQS*LEVSKP
Trigger: TGGTTTTGAGACTTCAAGGCAAGATTGAGAAGCTTC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAACTGCACCCTTCTCTaGTACTTCCAACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLNCTLL*YFQPLS
Trigger: ACTCAGTGGTTGGAAGTAGCAGAGAAGGGTGCAGTT...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTCTATTTCAGTAAAGTaGACAAATATGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHSISVK*TNMSVP
Trigger: GGGTACACTCATATTTGTGCACTTTACTGAAATAGA...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCAAAAATTCAAAGGTTTaGTTCATCAGTGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: IWVCLMSAVNNHLISPASKNSKV*FISVNS
Trigger: GGAGTTCACACTGATGAAGCAAACCTTTGAATTTTT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCAACTCGTTCCCTTCTaGTCAACTCACAACAAATGC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIQLVPF*STHNKC
Trigger: GCATTTGTTGTGAGTTGAGCAGAAGGGAACGAGTTG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTTCCAAAACCTTAACTaGCCTTCCGCTTCATACTCC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIFQNLN*PSASYS
Trigger: GGAGTATGAAGCGGAAGGCCAGTTAAGGTTTTGGAA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCATCGAAAGACTGCATaGAAAGGTGCCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTHRKTA*KGAFLV
Trigger: AACTAAAAAGGCACCTTTCCATGCAGTCTTTCGATG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTGCTGATGAGGTTGTaGTACGTCGTCCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLLMRL*YVVHSH
Trigger: ATGAGAGTGGACGACGTACCACAACCTCATCAGCAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGCTCTTTTTCCTTCTaGCATAGCATTTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMGSFSF*HSISVR
Trigger: TCTAACAGAAATGCTATGCCAGAAGGAAAAAGAGCC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATGGTGTTCTGTACCATaGTCTGGAGCCTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRWCSVP*SGASHS
Trigger: AGAATGAGAGGCTCCAGACCATGGTACAGAACACCA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCATTTTTCTTGCTCTGTaGGATTCATGGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTIFLAL*DSWYLM
Trigger: CATCAGGTACCATGAATCCCACAGAGCAAGAAAAAT...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTAACTCTGCTATGGTaGCCTGATGCTGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLTLLW*PDAENV
Trigger: AACATTTTCAGCATCAGGCCACCATAGCAGAGTTAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAACTGCTGGCGGAAGTaGCTAGCAGAGATTATAATT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVNCWRK*LAEIII
Trigger: AATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGGTAAATAGATGGGCTTaGCCCTCCAGGAATATATCA +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVVNRWA*PSRNIS
Trigger: TGATATATTCCTGGAGGGCCAAGCCCATCTATTTAC...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTAACATATTTGGGCTaGGCTTCTAGTGAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLTYLG*ASSEQS
Trigger: AGACTGCTCACTAGAAGCTCAGCCCAAATATGTTAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTCAAGGGAATTCATCTaGCTGACCTTCCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLSREFI*LTFLLA
Trigger: TGCTAACAGGAAGGTCAGTCAGATGAATTCCCTTGA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATTCTCAATCTTGCCTTaGAGTCTCAAAACCAGAACA +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKFSILP*SLKTRT
Trigger: TGTTCTGGTTTTGAGACTTCAAGGCAAGATTGAGAA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR TCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATGCAGAGTTGTTCTTTaGGCTGATTCACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKCRVVL*ADSLSL
Trigger: AAGAGAAAGTGAATCAGCTCAAAGAACAACTCTGCA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTAGATTTGGGTTTGTCTaGTGTCAGCGGTTAATAACC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIRFGFV*CQRLIT
Trigger: GGTTATTAACCGCTGACATCAGACAAACCCAAATCT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTGGTTAATTAGGCTTTaGCTTGGTTTTTGGCATTAC +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESAWLIRL*LGFWHY
Trigger: GTAATGCCAAAAACCAAGTCAAAGCCTAATTAACCA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTGGTTAATTAGGCTTTaGCTTGGTTTTTGGCATTAC +
Preference number: 4 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEWLIRL*LGFWHY
Trigger: GTAATGCCAAAAACCAAGTCAAAGCCTAATTAACCA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCACTATTTTACAGTGCTaGGAGGTCCAGATAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFTILQC*EVQIGP
Trigger: TGGACCTATCTGGACCTCTCAGCACTGTAAAATAGT...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTCTGTAAACCATACTaGTCACAGATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLFCKPY*SQMETS
Trigger: GCTGGTCTCCATCTGTGAGCAGTATGGTTTACAGAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGACTGCATGGAAAGGTaGCTTTTTAGTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMDCMER*LFSCLY
Trigger: ATATAGACAACTAAAAAGGCACCTTTCCATGCAGTC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGACTGCATGGAAAGGTaGCTTTTTAGTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSDCMER*LFSCLY
Trigger: ATATAGACAACTAAAAAGGCACCTTTCCATGCAGTC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTACTCGTTCCAACAAATaGCGGATTTCAGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLITRSNK*RISALK
Trigger: CTTTAAGGCTGAAATCCGGCATTTGTTGGAACGAGT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCAGATTCTCATATTCTaGCAACTTCTCTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSQILIF*QLLCIF
Trigger: GAAAATGCAGAGAAGTTGGCAGAATATGAGAATCTG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTCATATTCAATGGATTaGATTCTTCAGAACCGAGCC +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLSYSMD*ILQNRA
Trigger: GGCTCGGTTCTGAAGAATGCAATCCATTGAATATGA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACCAGCTCTGCCTCAATaGTCATATTCAATGGATTGC +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRPALPQ*SYSMDC
Trigger: GCAATCCATTGAATATGAGCATTGAGGCAGAGCTGG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLCFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFCFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTTTTCAAGTTCCTCCTaGAGGTGCTGGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQFSSSS*RCWFIL
Trigger: AAGGATAAACCAGCACCTGCAGGAGGAACTTGAAAA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGTCTCTCGACGACCATaGTGTTCAAATGTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQVSRRP*CSNVLC
Trigger: ACAAAGAACATTTGAACAGCATGGTCGTCGAGAGAC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCGTTCCCTTTTGTGACTaGTCTTCAGCTCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSVPFCD*SSAQVS
Trigger: AGATACTTGAGCTGAAGAGCAGTCACAAAAGGGAAC...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTTTTGCTGTAAAAACTaGTCTGTTTGTTCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESAFCCKN*SVCSAV
Trigger: TACTGCGGAACAAACAGAGCAGTTTTTACAGCAAAA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCAGGTACTGGTTTTCTTaGTTACATTCCTCTATGACA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSRYWFS*LHSSMT
Trigger: TGTCATAGAGGAATGTAAGCAAGAAAACCAGTACCT...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCGTAATTTTTCTTCTCTaGTGTTTTCTGTCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTVIFLL*CFLSLF
Trigger: GAACAGCGACAGAAAACAGCAGAGAAGAAAAATTAC...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCATCGAAAGACTGCATaGAAAGGTGCCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVHRKTA*KGAFLV
Trigger: AACTAAAAAGGCACCTTTCCATGCAGTCTTTCGATG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTGGAGTTCATCTACTTaGTCTTGTAGTACCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFWSSST*SCSTLH
Trigger: GTGCAGGGTACTACAAGACCAAGTAGATGAACTCCA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCATCTTTGAGAAGGTaGTTTTCCTGTTGCACAATA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSSLRR*FSCCTI
Trigger: TATTGTGCAACAGGAAAACCACCTTCTCAAAGATGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTCATCTTTGAGAAGGTaGTTTTCCTGTTGCACAATA +
Preference number: 4 (lower is better)
Translates to: GLLSHENKQVVVMNLESASSLRR*FSCCTI
Trigger: TATTGTGCAACAGGAAAACCACCTTCTCAAAGATGA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCGCTCTGTGGGATTCATaGTACCTGATGGGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFALWDS*YLMGLD
Trigger: ATCTAAACCCATCAGGTACCATGAATCCCACAGAGC...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCAGAGCTTTCAACAACTaGGCATTTTCAACATACAAG +
Preference number: 4 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTRAFNN*AFSTYK
Trigger: CTTGTATGTTGAAAATGCCCAGTTGTTGAAAGCTCT...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTATTTACTCCAAAGTaGTTTGTTCAGTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLFTPK*FVQCFP
Trigger: GGGAAAGCACTGAACAAACCACTTTGGAGTAAATAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAAAGTGTTCTTCATTTaGCAGAGTTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVKVFFI*QSSGQD
Trigger: ATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTGCAGAGTTGTTCTTTaGGCTGATTCACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSCRVVL*ADSLSL
Trigger: AAGAGAAAGTGAATCAGCTCAAAGAACAACTCTGCA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATTTGGGTTTGTCTaGTGTCAGCGGTTAATAACC +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRRFGFV*CQRLIT
Trigger: GGTTATTAACCGCTGACATCAGACAAACCCAAATCT...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTTGATTCCCTTTTCTTaGAACGAAGATCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQLIPFS*NEDPIF
Trigger: GAAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCACTTAGCCTTGCCTTaGCTGGAAATACCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLHLALP*LEIPLR
Trigger: TCTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGGACTGCATGGAAAGGTaGCTTTTTAGTTGTCTATAT +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLDCMER*LFSCLY
Trigger: ATATAGACAACTAAAAAGGCACCTTTCCATGCAGTC...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTGTTTTTCTAAGGTGTaGGTTTCGTTCTCATGCCTT +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSCFSKV*VSFSCL
Trigger: AAGGCATGAGAACGAAACGCACACCTTAGAAAAACA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGTTCCCTTTTGTGACTaGTCTTCAGCTCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRVPFCD*SSAQVS
Trigger: AGATACTTGAGCTGAAGAGCAGTCACAAAAGGGAAC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAAAACCTACATGGTCTaGTTATCCCTCTTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVKTYMV*LSLFSK
Trigger: CTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTACTAGAAATGTCTaGACCACAGAAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVLTRNV*TTEERS
Trigger: AGATCTTTCTTCTGTGGTGCAGACATTTCTAGTAAG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCAAATCTAAGCTTAAGTaGAGGCTTCTAAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSKSKLK*RLLKSR
Trigger: TCTGCTTTTTAGAAGCCTGCACTTAAGCTTAGATTT...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCCTGTTGCACAATATaGGTCTGTATTTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSCCTI*VCILTS
Trigger: TGAAGTTAAAATACAGACCCATATTGTGCAACAGGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CCA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTCATCTTTGAGAAGGTaGTTTTCCTGTTGCACAATA +
Preference number: 4 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLSSLRR*FSCCTI
Trigger: TATTGTGCAACAGGAAAACCACCTTCTCAAAGATGA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGATGTTTTTGGTGCTTaGGAAGAAGATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: PGIYQSELFGLLSHENKQDVFGA*EEDWIP
Trigger: TGGAATCCAATCTTCTTCCCAAGCACCAAAAACATC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGACAACAGCTTATATTTaGGAGAAGCCTCAGGGATTC +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLTTAYI*EKPQGF
Trigger: GAATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGT...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CCA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAGAGCTTTCAACAACTaGGCATTTTCAACATACAAG +
Preference number: 4 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVRAFNN*AFSTYK
Trigger: CTTGTATGTTGAAAATGCCCAGTTGTTGAAAGCTCT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAGAAGTCAATGGCGCTaGTGTCAGATTCCTAACTAT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLRSQWR*CQIPNY
Trigger: ATAGTTAGGAATCTGACACCAGCGCCATTGACTTCT...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTATGAGTGTACCCTTTaGTTTGGCTATGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSYECTL*FGYDLK
Trigger: TTTGAGGTCATAGCCAAACCAAAGGGTACACTCATA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCTATTTACTCCAAAGTaGTTTGTTCAGTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILFTPK*FVQCFP
Trigger: GGGAAAGCACTGAACAAACCACTTTGGAGTAAATAG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGGATCTTGAGCATGAGTaGAAAGTCCTATTTGGCACT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLDLEHE*KVLFGT
Trigger: AGTGCCAAATAGGACTTTCCACTCATGCTCAAGATC...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
3UTR CAA 72 bp CCTGCTTCATCGTCGCAATTCTATGCTCTAAAAGACTaGATTTTGCCAACTTATCGACACAGCTATTTAATT +
Preference number: 4 (lower is better)
Translates to: PASSSQFYALKD*ILPTYRHSYLI
Trigger: AATTAAATAGCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAGAGCATAGAATTGCGACGATGAAGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTGCAGAGTTGTTCTTTaGGCTGATTCACTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLCRVVL*ADSLSL
Trigger: AAGAGAAAGTGAATCAGCTCAAAGAACAACTCTGCA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR TCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATTGATTCCCTTTTCTTaGAACGAAGATCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLIPFS*NEDPIF
Trigger: GAAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTCTTCACAAACTTCTTaGAGTTTCTCTTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISSQTS*SFSSIQ
Trigger: CTGGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTCAATGACCAGCTCTaGCTCAATGCTCATATTCAA +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLFNDQL*LNAHIQ
Trigger: TTGAATATGAGCATTGAGGCAGAGCTGGTCATTGAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAAAACCATCTTCTGAACTaGAGCATTTTCTTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKNHLLN*SIFLFY
Trigger: GTAAAACAAGAAAATGCTGCAGTTCAGAAGATGGTT...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCGAAGCTTCTCAATCTTaGCTTGAAGTCTCAAAACCA +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFEASQS*LEVSKP
Trigger: TGGTTTTGAGACTTCAAGGCAAGATTGAGAAGCTTC...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR GCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCAGGTACTGGTTTTCTTaGTTACATTCCTCTATGACA +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSRYWFS*LHSSMT
Trigger: TGTCATAGAGGAATGTAAGCAAGAAAACCAGTACCT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTCTATTTCAGTAAAGTaGACAAATATGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFSISVK*TNMSVP
Trigger: GGGTACACTCATATTTGTGCACTTTACTGAAATAGA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACATCGAAAGACTGCATaGAAAGGTGCCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRHRKTA*KGAFLV
Trigger: AACTAAAAAGGCACCTTTCCATGCAGTCTTTCGATG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGGCTCTTTTTCCTTCTaGCATAGCATTTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRGSFSF*HSISVR
Trigger: TCTAACAGAAATGCTATGCCAGAAGGAAAAAGAGCC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAATTTTTCTTGCTCTGTaGGATTCATGGTACCTGATG +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRIFLAL*DSWYLM
Trigger: CATCAGGTACCATGAATCCCACAGAGCAAGAAAAAT...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCAAGCTCAATTTTTCTTaGTCTGTGGGATTCATGGTA +
Preference number: 4 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFKLNFS*SVGFMV
Trigger: TACCATGAATCCCACAGAGCAAGAAAAATTGAGCTT...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR GCA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGAGGAGATGTTGCCTaGTGCATTTCCTTTATTTTA +
Preference number: 4 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRRGDVA*CISFIL
Trigger: TAAAATAAAGGAAATGCAGCAGGCAACATCTCCTCT...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR GCA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCTTACTAGAAATGTCTaGACCACAGAAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLTRNV*TTEERS
Trigger: AGATCTTTCTTCTGTGGTGCAGACATTTCTAGTAAG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CCA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCTCCTGTTGCACAATATaGGTCTGTATTTTAACTTCA +
Preference number: 4 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSSCCTI*VCILTS
Trigger: TGAAGTTAAAATACAGACCCATATTGTGCAACAGGA...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 90 bp TCTCTCCGGAGCGCCCGCACAGCCGGCAGCCCGCCTCCAGCGCTCTaGAAAGCGAAGGAGGACGCTTTGTTAGGGCTGGAGAAACGGGAC +
Preference number: 5 (lower is better)
Translates to: SLRSARTAGSPPPAL*KAKEDALLGLEKRD
Trigger: GTCCCGTTTCTCCAGCCCTAACAAAGCGTCCTCCTTCGCTTTGCAGAGCGCTGGAGGCGGGCTGCCGGCTGTGCGGGCGCTCCGGAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453196.6
ENST00000463419.1
ENST00000496749.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACGCGCCCCTCCAGGCTTaGCAGAGCGCTTTCACACCT +
Preference number: 5 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDAPLQA*QSAFTP
Trigger: AGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCGC...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCCTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGAGGTCCTTCAGCTCTaGGCGGTAGCGCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEEVLQL*AVAPLQ
Trigger: CTGGAGGGGCGCTACCGCCAAGAGCTGAAGGACCTC...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS CCA 90 bp TCCTGCCTTTCCTGGTCATGTTCCATTTCTAGTCTTTCCAGCCGCTaGCTGGCCAGCTGCTCCGAAGCCCCTGCCTGGCACAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: SCLSWSCSISSLSSR*LASCSEAPAWHRTS
Trigger: GGAGGTCCTGTGCCAGGCAGGGGCTTCGGAGCAGCTGGCCAGCCAGCGGCTGGAAAGACTAGAAATGGAACATGACCAGGAAAGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGGCGAAGGAGGACGCTTaGTTAGGGCTGGAGAAACGG +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRAKEDA*LGLEKR
Trigger: CCGTTTCTCCAGCCCTAACAAAGCGTCCTCCTTCGC...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp CCAGGGACCCTGTGCCCGTCGTGTCAAAACTGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGTCCTGCTCCACCTCATCCATCCCAT +
Preference number: 5 (lower is better)
Translates to: PGTLCPSCQNCQTAP*VGPHAGPAPPHPSH
Trigger: ATGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAGTTTTGACACGACGGGCACAGGGTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp GCGTTGCGTCTTCCAGTGCTCACTGCAGTCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATCCAGTGGCTCAATCACCGTCACTTC +
Preference number: 5 (lower is better)
Translates to: ALRLPVLTAVTGWDV*RPRFFIQWLNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 90 bp ACCTCCTCCAAGCTCAACATGTGGCAAAGGTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCCGTCGTGTCAAAACTTCTGTCGGTC +
Preference number: 5 (lower is better)
Translates to: TSSKLNMWQRSVSSS*PRDPVPVVSKLLSV
Trigger: GACCGACAGAAGTTTTGACACGACGGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACATGTTGAGCTTGGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453401.6
CDS-3UTR CAA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCGAGGCCATTAAAGACTaGAGCTTCTCGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGEAIKD*SFSALS
Trigger: GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTC...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGAGTTCTAAACGCTGCTaGCCTGCCTGCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRSSKRC*PACCRI
Trigger: GATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCTTGAGCACTGCTGCTaGCCCCTGAAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPLEHCC*PLKFSN
Trigger: ATTGCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSEPLIL*PKQLLF
Trigger: GAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTC...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRCVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 5 (lower is better)
Translates to: APWAPSDRLAAGAAANPKCVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGCTGCAAATCCCAAGCATGAGGGGACGGGCTAGGCGTCGCAGTGGACCTCAGTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 5 (lower is better)
Translates to: QLQIPSMRGRARRRSGPQCVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...CTGAGGTCCACTGCGACGCCTAGCCCGTCCCCTCATGCTTGGGATTTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS GCA 90 bp ACCTCCTCCAAGCTCAACATGTGGCAAAGGTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCCGTCGTGTCAAAACTGTCAAACAGC +
Preference number: 5 (lower is better)
Translates to: TSSKLNMWQRSVSSS*PRDPVPVVSKLSNS
Trigger: GCTGTTTGACAGTTTTGACACGACGGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACATGTTGAGCTTGGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTCAGGAAACTCCTCCACGGACTCTTGGAACTCGGGCAAGGACCTTCGTCCGTACTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: FRKLLHGLLELGQGPSSVLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...TACGGACGAAGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAGTTTCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR CAA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGTCCAGTTTCCTGAGGTaGTACTCATTCCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRSSFLR*YSFRRS
Trigger: AGAGCGGCGGAATGAGTACAACCTCAGGAAACTGGA...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTTTCCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRFPCGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGGAAA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTTCCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGFPCGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGGAAA...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGCGCCCCTCCAGGCTTaGCAGAGCGCTTTCACACCT +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCAPLQA*QSAFTP
Trigger: AGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCGC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGAAGGCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLKACGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGCCTT...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485005.1
CDS-3UTR CAA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: APWAPSDRLAAGAAANPKSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp CCTGCCTGGCACAGGACCTCCTCACGCTCCCTCAGTTCCCTTTTGTaGCTGCTCTTCAGCTCAAGTATCTGGTCAGACAGCAGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: PAWHRTSSRSLSSLL*LLFSSSIWSDSRLC
Trigger: GCAAAGCCTGCTGTCTGACCAGATACTTGAGCTGAAGAGCAGTCACAAAAGGGAACTGAGGGAGCGTGAGGAGGTCCTGTGCCAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS GCA 90 bp CTCAATGCCCTCTTCCTGCCAGGTGTCCAGTATTCTCTCCACAGATaGATGGCCCATCCCATCATCCAGGCAGGAGAAGACCCGAAAGCC +
Preference number: 5 (lower is better)
Translates to: LNALFLPGVQYSLHR*MAHPIIQAGEDPKA
Trigger: GGCTTTCGGGTCTTCTCCTGCCTGGATGATGGGATGGGCCATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 90 bp CCTGGCACAGGACCTCCTCACGCTCCCTCAGTTCCCTTTTGTGACTaGTCTTCAGCTCAAGTATCTGGTCAGACAGCAGGCTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGTGPPHAPSVPFCD*SSAQVSGQTAGFAG
Trigger: CCCAGCAAAGCCTGCTGTCTGACCAGATACTTGAGCTGAAGAGCAGTCACAAAAGGGAACTGAGGGAGCGTGAGGAGGTCCTGTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS-3UTR CAA 90 bp TGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: CKESSRKNHGNCWALESTLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...GGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTCATTGCTGATGAGGTaGTGGTACGTCGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLSLLMR*WYVVHS
Trigger: AGAGTGGACGACGTACCACAACCTCATCAGCAATGA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGAGTTCTAAACGCTGCTaGCCTGCCTGCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAESSKRC*PACCRI
Trigger: GATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACT...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCTAGGCGTCGCAGTGGACCTCAGGTGCTGCATCTTCACACACTATCTCAGGCCTGAGCACTCTGCCTaGTGCACGATATTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GLGVAVDLRCCIFTHYLRPEHSA*CTIFFQ
Trigger: CTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGG...CCTGAGATAGTGTGTGAAGATGCAGCACCTGAGGTCCACTGCGACGCCTAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGTGTGTCAGTCTAGCCTaGAGCTCCATCTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRCVSLA*SSISCC
Trigger: GCAACATGAGATGGAGCTCAAGGCTAGACTGACACA...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLHDSYQ*FLVSLW
Trigger: CCACAGGGAAACCAGGAACAACTGGTAACTGTCATG...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CGCTACTCTGAAGGCCTTCCCTCTCCCGCTCAAAGCTTGCTTGAGCCTGTGTCACCTATTTGGCACTCCTaGACCTCAGGTGGCATGCCA +
Preference number: 5 (lower is better)
Translates to: RYSEGLPSPAQSLLEPVSPIWHS*TSGGMP
Trigger: TGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGG...TGACACAGGCTCAAGCAAGCTTTGAGCGGGAGAGGGAAGGCCTTCAGAGTAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGGTTGTTGTGATGAACTaGGAAAGTGCCCTGCACCTA +
Preference number: 5 (lower is better)
Translates to: APWAPSDRLAAGAAANPKVVVMN*ESALHL
Trigger: TAGGTGCAGGGCACTTTCCAAGTTCATCACAACAAC...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp ATGTCAGCTCTCCAAAAGCTCACTGCAGTCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATCCAGTGGCTCAATCACCGTCACTTC +
Preference number: 5 (lower is better)
Translates to: MSALQKLTAVTGWDV*RPRFFIQWLNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCAGTGAGCTTTTGGAGAGCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS TCA 90 bp TCGAGCTGCTTTATCACACTCACTGCAGTCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATCCAGTGGCTCAATCACCGTCACTTC +
Preference number: 5 (lower is better)
Translates to: SSCFITLTAVTGWDV*RPRFFIQWLNHRHF
Trigger: GAAGTGACGGTGATTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCAGTGAGTGTGATAAAGCAGCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486200.1
CDS GCA 90 bp TCCAAGGCCTTCAGGATCTCCTGGCTGTTCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTCTCCACAGATGCATGGCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: SKAFRISWLFSMPSS*QVSSILSTDAWPIP
Trigger: TGGGATGGGCCATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 90 bp TGCCACACCTTCAGGATCTCCTGGCTGTTCTCAATGCCCTCTTCCTaGCAGGTGTCCAGTATTCTCTCCACAGATGCATGGCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: CHTFRISWLFSMPSS*QVSSILSTDAWPIP
Trigger: TGGGATGGGCCATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGTGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474937.1
CDS CCA 90 bp ATGCCCTCTTCCTGCCAGGTGTCCAGTATTCTCTCCACAGATGCATaGCCCATCCCATCATCCAGGCAGGAGAAGACCCGAAAGCCAATG +
Preference number: 5 (lower is better)
Translates to: MPSSCQVSSILSTDA*PIPSSRQEKTRKPM
Trigger: CATTGGCTTTCGGGTCTTCTCCTGCCTGGATGATGGGATGGGCCATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLSNSS*SRASCW
Trigger: CCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPESQWY*SLLMRL
Trigger: CAACCTCATCAGCAATGACAAGTACCATTGGCTTTC...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGTCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGATCTCTTCCTATGCCTaGGAAGCCTATGACTTCATG +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRISSYA*EAYDFM
Trigger: CATGAAGTCATAGGCTTCCAAGGCATAGGAAGAGAT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGATCTCTTCCTATGCCTaGGAAGCCTATGACTTCATG +
Preference number: 5 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSISSYA*EAYDFM
Trigger: CATGAAGTCATAGGCTTCCAAGGCATAGGAAGAGAT...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCGCACTTAGCCTTGCCTaGACTGGAAATACCTTTAAG +
Preference number: 5 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPALSLA*TGNTFK
Trigger: CTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTGC...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGAACACATGGGACTCATaGATCCTGCAGCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: GHHRTGLLLEQLQIPSMRNTWDS*ILQQVL
Trigger: AAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTT...CCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS GCA 90 bp CTTCCCAGGTCCCGGACCTCATCATCTTCCAGGTCACTTAGGACATaGCGCCTGGTCACACCTTCTACTTGCTTCGTTCGGTTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: LPRSRTSSSSRSLRT*RLVTPSTCFVRFCC
Trigger: ACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCTGGAAGATGATGAGGTCCGGGACCTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAGTTCTAAACGCTGCTaGCCTGCCTGCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSSKRC*PACCRI
Trigger: GATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCAGATTAAACTTCTCTaGTTCCCGTTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLQIKLL*FPFLQC
Trigger: GCATTGGAGGAACGGGAACAAGAGAAGTTTAATCTG...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 5 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 5 (lower is better)
Translates to: TAPWAPSDRLAAGAAANPPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...GGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000485005.1
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGAGGTCCTTCAGCTCTaGGCGGTAGCGCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGEVLQL*AVAPLQ
Trigger: CTGGAGGGGCGCTACCGCCAAGAGCTGAAGGACCTC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTGCCTATTTGGCACTCCTaGACCTCAGGTGGCATGCCA +
Preference number: 5 (lower is better)
Translates to: QRKPEHSALCTIFFQLRLPIWHS*TSGGMP
Trigger: TGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGG...CAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CAA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGGCACTTAGCCTTGCCTaGACTGGAAATACCTTTAAG +
Preference number: 5 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRALSLA*TGNTFK
Trigger: CTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTGC...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTCTTCTATCCAGTCTaGGGGAGGGGAAGATCCACT +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLFYPV*GRGRST
Trigger: AGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGAATCTTCTACACTCATaGTACCGTCAGGATCAAGAT +
Preference number: 5 (lower is better)
Translates to: APWAPSDRLAAGAAANPKNLLHS*YRQDQD
Trigger: ATCTTGATCCTGACGGTACAATGAGTGTAGAAGATT...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCGAGGCCATTAAAGACTaGAGCTTCTCGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCEAIKD*SFSALS
Trigger: GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTC...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GCTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGTACAGTTTCCGTTTTTaGCCACATTTCTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: APWAPSDRLAAGAAANPKYSFRF*PHFFLR
Trigger: TCTCAGGAAGAAATGTGGCAAAAAACGGAAACTGTA...CTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGAACACTAGAGATTTTTaGCTGGAAGTCAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRNTRDF*LEVREI
Trigger: GATCTCTCTGACTTCCAGCAAAAAATCTCTAGTGTT...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGAACCACTCTGAAGCATaGAGAGAGGAGATGTTGCCT +
Preference number: 5 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAENHSEA*REEMLP
Trigger: AGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTT...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGGGGACGGCTTGATTCTGTACTCTaGGCCTTTCTTGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: HRTGLLLEQLQIPSMRGRLDSVL*AFLDVS
Trigger: AGACACATCAAGAAAGGCCAAGAGTACAGAATCAAG...CCGTCCCCTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCTCAGCTCCTGTAACTTaGTTTTCTCCAGTTCTAACT +
Preference number: 5 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSSAPVT*FSPVLT
Trigger: AGTTAGAACTGGAGAAAACAAAGTTACAGGAGCTGA...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAAGGCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCKACGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGCCTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLSVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTCCCTGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCCTTGATTCCCTTTTCTaGAAACGAAGATCCCATCTT +
Preference number: 5 (lower is better)
Translates to: LPGHHRTGLLLEQLQIPSLDSLF*KRRSHL
Trigger: AAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAAG...GCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp GGTAGCGCCCCTCCAGGCTTTGCAGAGCGCTTTCACACCTCTCAGTaGCTTTCTGACAATCAGACTGAAACTGGGCTTCTATTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GSAPPGFAERFHTSQ*LSDNQTETGLLFER
Trigger: CCTCTCAAATAGAAGCCCAGTTTCAGTCTGATTGTCAGAAAGTCACTGAGAGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 90 bp GCTTCTAGTGAGCAGTCTTTTATCAGAAGACAGTGTGTCAGCTTGTaGCCATTCAGGAGCGGCCCAGACACCCGAGCTACTTGTTGGCAG +
Preference number: 5 (lower is better)
Translates to: ASSEQSFIRRQCVSL*PFRSGPDTRATCWQ
Trigger: CTGCCAACAAGTAGCTCGGGTGTCTGGGCCGCTCCTGAATGGTCACAAGCTGACACACTGTCTTCTGATAAAAGACTGCTCACTAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486200.1
ENST00000674061.1
CDS TCA 90 bp CATGGCAACTGCTGGGCACTGGAAAGCACCCCAGGCTCAGTATCTTaGGGCAAAAACCAAGTGTTCGAGCTGCTTTATCACACTCACTGC +
Preference number: 5 (lower is better)
Translates to: HGNCWALESTPGSVS*GKNQVFELLYHTHC
Trigger: GCAGTGAGTGTGATAAAGCAGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486200.1
CDS CCA 90 bp AGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCTTGTAGTACCCTGCACTGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: SLSTLPCARYSSSSD*SSSTWSCSTLHCRS
Trigger: TGAGCGGCAGTGCAGGGTACTACAAGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGCTCTTCTATCCAGTCTaGGGGAGGGGAAGATCCACT +
Preference number: 5 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLLFYPV*GRGRST
Trigger: AGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGAG...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCAGTTCTAAACGCTGCTaGCCTGCCTGCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGSSKRC*PACCRI
Trigger: GATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACT...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLEPLIL*PKQLLF
Trigger: GAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTC...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGGAGGTCCTTCAGCTCTaGGCGGTAGCGCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKEVLQL*AVAPLQ
Trigger: CTGGAGGGGCGCTACCGCCAAGAGCTGAAGGACCTC...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACCTGTTCAAATGTTCTTaGTATGTTTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: PAAAGVEAAETAPWAPSDLFKCS*YVFSSI
Trigger: GATGCTGGAGAAAACATACAAAGAACATTTGAACAG...GTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTCTGCAGTGAGTTCTTaGTTATTTTCTAGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLSAVSS*LFSSAS
Trigger: TGAGGCACTAGAAAATAACAAAGAACTCACTGCAGA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGTTACTCCAAAGTGGTTaGTTCAGTGCTTTCCCTATA +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLLLQSG*FSAFPI
Trigger: TATAGGGAAAGCACTGAACAAACCACTTTGGAGTAA...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: QQLALKLQKLLPGHHRTGYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...GCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGTATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LPAAAGVEAAETAPWAPSYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...CGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCTGCAGCAGCTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGCCAACAGCAATAACTTaGAGTAACTTGACACATATC +
Preference number: 5 (lower is better)
Translates to: CLQQLALKLQKLLPGHHRPTAIT*SNLTHI
Trigger: GATATGTGTCAAGTTACTCAAAGTTATTGCTGTTGG...CCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAGCTGCTGCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS CCA 90 bp GGTCCCGGACCTCATCATCTTCCAGGTCACTTAGGACATGCCGCCTaGTCACACCTTCTACTTGCTTCGTTCGGTTTTGCTGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: GPGPHHLPGHLGHAA*SHLLLASFGFAVKT
Trigger: AGTTTTTACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCTGGAAGATGATGAGGTCCGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTCTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: LHHCVCLSVLAELFFELILLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTGAGCTTCTCGGCCTaGTCCAGATCTGACCGTAGC +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHLSFSA*SRSDRS
Trigger: GCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATCCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 5 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLHDSYQ*FLVSLW
Trigger: CCACAGGGAAACCAGGAACAACTGGTAACTGTCATG...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAACCACTCTGAAGCATaGAGAGAGGAGATGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCNHSEA*REEMLP
Trigger: AGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGTACTCTTGGCCTTTCTaGATGTGTCTGAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEYSWPF*MCLNCS
Trigger: GGAACAATTCAGACACATCAAGAAAGGCCAAGAGTA...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCGAAGGAGGACGCTTaGTTAGGGCTGGAGAAACGG +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGAKEDA*LGLEKR
Trigger: CCGTTTCTCCAGCCCTAACAAAGCGTCCTCCTTCGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACCCTATTTGGCACTCCTaGACCTCAGGTGGCATGCCA +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHPIWHS*TSGGMP
Trigger: TGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGG...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGGCGTTGAAGCTGCAGAAACTGCTCCCTGGGCACCATCGGACAGGCTTGCTGCAAAAATTCAAAGGTTaGCTTCATCAGTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: LALKLQKLLPGHHRTGLLQKFKG*LHQCEL
Trigger: GAGTTCACACTGATGAAGCAAACCTTTGAATTTTTG...CAGCAAGCCTGTCCGATGGTGCCCAGGGAGCAGTTTCTGCAGCTTCAACGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCAAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCCAGGCTCAGTATCTaGAGGCAAAAACCAAGTGTT +
Preference number: 5 (lower is better)
Translates to: CKESSRKNHGNCWALESTPRLSI*RQKPSV
Trigger: AACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGG...GGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS TCA 90 bp CCATCTCCTTCCACCTCCTCCTCTCCTATCACCTGGCAACCACTCTaGAGCATTGAGAGAGGAGATGTTGCCTGCTGCATTTCCTTTATT +
Preference number: 5 (lower is better)
Translates to: PSPSTSSSPITWQPL*SIERGDVACCISFI
Trigger: AATAAAGGAAATGCAGCAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGTGATAGGAGAGGAGGAGGTGGAAGGAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS GCA 90 bp TCAATTTTAGCTGCCACACCTTCAGGATCTCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGTCCAGTATTCTCTCCACAGATGCAT +
Preference number: 5 (lower is better)
Translates to: SILAATPSGSPGCSQ*PLPARCPVFSPQMH
Trigger: ATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGTGTGGCAGCTAAAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474937.1
CDS CCA 90 bp AGAAGACCCGAAAGCCAATGGTACTTGTCATTGCTGATGAGGTTGTaGTACGTCGTCCACTCTCATCGAAAGACTGCATGGAAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RRPESQWYLSLLMRL*YVVHSHRKTAWKGA
Trigger: GGCACCTTTCCATGCAGTCTTTCGATGAGAGTGGACGACGTACCACAACCTCATCAGCAATGACAAGTACCATTGGCTTTCGGGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASLSNSS*SRASCW
Trigger: CCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHLSNSS*SRASCW
Trigger: CCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCCCTGCACCTAGTAAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: CPAPSKSSTNCWRKWLAEESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...CTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTTACTAGGTGCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTGAGCTTCTCGGCCTaGTCCAGATCTGACCGTAGC +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLSFSA*SRSDRS
Trigger: GCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAGTTCTAAACGCTGCTaGCCTGCCTGCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSSKRC*PACCRI
Trigger: GATCCTGCAGCAGGCAGGCAAGCAGCGTTTAGAACT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGGGCACCATCGGACAGGCTTGCTGCTGGAGCAGCTGCAAATCCCAAGCATGAGTATGTCCCTGTGATGTaGTTCTTTCATCTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: WAPSDRLAAGAAANPKHEYVPVM*FFHLFN
Trigger: ATTGAACAGATGAAAGAACAACATCACAGGGACATA...CTCATGCTTGGGATTTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGATTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCAGATTAAACTTCTCTaGTTCCCGTTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCQIKLL*FPFLQC
Trigger: GCATTGGAGGAACGGGAACAAGAGAAGTTTAATCTG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GTGCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: VLHLHTLSQAENCTLLCYSVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...GTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp CACAGATGGAGACCAGCTTCTTCCGGTTCAGGTGACCATCACGGGTaGTCCCCAAATCTTCACAAACTTCTTGCAGTTTCTCTTCTATCC +
Preference number: 5 (lower is better)
Translates to: HRWRPASSGSGDHHG*SPNLHKLLAVSLLS
Trigger: GGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGATTTGGGGATCACCCGTGATGGTCACCTGAACCGGAAGAAGCTGGTCTCCATCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp AAACCATACTGCTCACAGATGGAGACCAGCTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCCAAATCTTCACAAACTTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: KPYCSQMETSFFRFR*PSRVIPKSSQTSCS
Trigger: ACTGCAAGAAGTTTGTGAAGATTTGGGGATCACCCGTGATGGTCACCTGAACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp CTCATCTCGGCTCTTTCTCGATCTGCTGTCTCACAGGTCGCTTTGTaGATGTTCTCCATGGCTAGAAGCTTGGACATCATTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LISALSRSAVSQVAL*MFSMARSLDIISCL
Trigger: AAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGAGAACATTCACAAAGCGACCTGTGAGACAGCAGATCGAGAAAGAGCCGAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 90 bp GCTTCTCGGCCTTGTCCAGATCTGACCGTAGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTTCCCTTCTGCTCAACTCACAACAAA +
Preference number: 5 (lower is better)
Translates to: ASRPCPDLTVASLFL*PPDQLVPFCSTHNK
Trigger: TTTGTTGTGAGTTGAGCAGAAGGGAACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGCTACGGTCAGATCTGGACAAGGCCGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS GCA 90 bp TCTTCCAGGTCACTTAGGACATGCCGCCTGGTCACACCTTCTACTTaGTTCGTTCGGTTTTGCTGTAAAAACTGCTCTGTTTGTTCCGCA +
Preference number: 5 (lower is better)
Translates to: SSRSLRTCRLVTPST*FVRFCCKNCSVCSA
Trigger: TGCGGAACAAACAGAGCAGTTTTTACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCTGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCTCCTCCACGGACTCTaGGAACTCGGGCAAGGACCT +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSLLHGL*ELGQGP
Trigger: AGGTCCTTGCCCGAGTTCCAAGAGTCCGTGGAGGAG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGATACTCCTCACTGCGTaGCGTCTTCCAGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGILLTA*RLPVLT
Trigger: AGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTAT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTTGAGCTTCTCGGCCTaGTCCAGATCTGACCGTAGC +
Preference number: 5 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFLSFSA*SRSDRS
Trigger: GCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCTTGAGCTTCTCGGCCTaGTCCAGATCTGACCGTAGC +
Preference number: 5 (lower is better)
Translates to: LVLKPPFPAESLVGQISSLSFSA*SRSDRS
Trigger: GCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAA...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCCAGTTTCCTGAGGTaGTACTCATTCCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSSFLR*YSFRRS
Trigger: AGAGCGGCGGAATGAGTACAACCTCAGGAAACTGGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCCTGAGCACTCTGCCTaGTGCACGATATTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGPEHSA*CTIFFQ
Trigger: CTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTTGAGCACTGCTGCTaGCCCCTGAAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLEHCC*PLKFSN
Trigger: ATTGCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTGTGTCAGTCTAGCCTaGAGCTCCATCTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHCVSLA*SSISCC
Trigger: GCAACATGAGATGGAGCTCAAGGCTAGACTGACACA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTGTTTTAAAGCCTCCTTTTCCTGCTGAGTCACTCGTAGGTCAGATTTCATCCTCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 5 (lower is better)
Translates to: LVLKPPFPAESLVGQISSSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...GGATGAAATCTGACCTACGAGTGACTCAGCAGGAAAAGGAGGCTTTAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAAGGTGGTTTTCCTGTaGCACAATATGGGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCKVVFL*HNMGLY
Trigger: ATACAGACCCATATTGTGCAACAGGAAAACCACCTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCGCGCCCCTCCAGGCTTaGCAGAGCGCTTTCACACCT +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLAPLQA*QSAFTP
Trigger: AGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCGC...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTTGATGTGTCTGAATaGTTCCATGTAACCAGGCAA +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLDVSE*FHVTRQ
Trigger: TTGCCTGGTTACATGGAACAATTCAGACACATCAAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTACTCTTGGCCTTTCTaGATGTGTCTGAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCYSWPF*MCLNCS
Trigger: GGAACAATTCAGACACATCAAGAAAGGCCAAGAGTA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTCCTATTTGGCACTCCTaGACCTCAGGTGGCATGCCA +
Preference number: 5 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFPIWHS*TSGGMP
Trigger: TGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGG...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCGTTGTTGTGATGAACTaGGAAAGTGCCCTGCACCTA +
Preference number: 5 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGVVVMN*ESALHL
Trigger: TAGGTGCAGGGCACTTTCCAAGTTCATCACAACAAC...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp AACAAATGCCGGATTTCAGCCTTAAAGCTGGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACCAAAAGTTCATTTTCAAGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: NKCRISALKLARAAW*MLFLVTKSSFSRAS
Trigger: ACTGGCCCTTGAAAATGAACTTTTGGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGCCAGCTTTAAGGCTGAAATCCGGCATTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp TTCCACCTCCTCCTCTCCTATCACCTGGCAACCACTCTGAAGCATTaGGAGAGGAGATGTTGCCTGCTGCATTTCCTTTATTTTACTCTG +
Preference number: 5 (lower is better)
Translates to: FHLLLSYHLATTLKH*ERRCCLLHFLYFTL
Trigger: CAGAGTAAAATAAAGGAAATGCAGCAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGTGATAGGAGAGGAGGAGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 90 bp CAAGCTCAGAAAAACCCTCTACTGAAGCTTCAGACTCCTCTATTTTaGCTTCCTGTCTCTGAACAGAGCTCGTCCCTGTACTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: QAQKNPLLKLQTPLF*LPVSEQSSSLYFPG
Trigger: ACCTGGGAAGTACAGGGACGAGCTCTGTTCAGAGACAGGAAGTCAAAATAGAGGAGTCTGAAGCTTCAGTAGAGGGTTTTTCTGAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESALSNSS*SRASCW
Trigger: CCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCAGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: KESSRKNHGNCWALESTPESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...TGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCATACTCCTCACTGCGTaGCGTCTTCCAGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASILLTA*RLPVLT
Trigger: AGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTAT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTCTCTTCTATCCAGTCTaGGGGAGGGGAAGATCCACT +
Preference number: 5 (lower is better)
Translates to: LHHCVCLSVLAELFFELILFYPV*GRGRST
Trigger: AGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGAG...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCATTGCTGATGAGGTaGTGGTACGTCGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSLLMR*WYVVHS
Trigger: AGAGTGGACGACGTACCACAACCTCATCAGCAATGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCGAGGCCATTAAAGACTaGAGCTTCTCGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVEAIKD*SFSALS
Trigger: GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTC...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCCTGAGCACTCTGCCTaGTGCACGATATTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASPEHSA*CTIFFQ
Trigger: CTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCCTGAGCACTCTGCCTaGTGCACGATATTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHPEHSA*CTIFFQ
Trigger: CTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTGCATCTTCACACACTATCTCAGGCAGAGAACTGCACCCTTCTCTGCTACTTCAGATTAAACTTCTCTaGTTCCCGTTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: AASSHTISGRELHPSLLLQIKLL*FPFLQC
Trigger: GCATTGGAGGAACGGGAACAAGAGAAGTTTAATCTG...AAGTAGCAGAGAAGGGTGCAGTTCTCTGCCTGAGATAGTGTGTGAAGATGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCTTTCATCCGGGACATTaGCAGGTTTACATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGFHPGH*QVYILH
Trigger: GTGCAGAATGTAAACCTGCAAATGTCCCGGATGAAA...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 5 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCCACCATCGGACAGGCTaGCTGCTGGAGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFHHRTG*LLEQLQ
Trigger: TTGCAGCTGCTCCAGCAGCAAGCCTGTCCGATGGTG...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTCCATGGCTAGAAGCTaGGACATCATTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHSMARS*DIISCL
Trigger: AAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTCTGCAGTGAGTTCTTaGTTATTTTCTAGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCSAVSS*LFSSAS
Trigger: TGAGGCACTAGAAAATAACAAAGAACTCACTGCAGA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCAAGGTACTGGTTTTCTaGCTTACATTCCTCTATGAC +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCKVLVF*LTFLYD
Trigger: GTCATAGAGGAATGTAAGCAAGAAAACCAGTACCTT...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCGCGAAGGAGGACGCTTaGTTAGGGCTGGAGAAACGG +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESAAKEDA*LGLEKR
Trigger: CCGTTTCTCCAGCCCTAACAAAGCGTCCTCCTTCGC...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CCA 90 bp CCCAAATCTTCACAAACTTCTTGCAGTTTCTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTCTGTGAAGCATTCAAGTCATCTGGG +
Preference number: 5 (lower is better)
Translates to: PKSSQTSCSFSSIQS*GGEDPLCEAFKSSG
Trigger: CCCAGATGACTTGAATGCTTCACAGAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGAGAAACTGCAAGAAGTTTGTGAAGATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CCA 90 bp CCTTGTGCACGATATTCTTCCAGCTCAGACTGGAGTTCATCTACTTaGTCTTGTAGTACCCTGCACTGCCGCTCATATTCATTTCTCATC +
Preference number: 5 (lower is better)
Translates to: PCARYSSSSDWSSST*SCSTLHCRSYSFLI
Trigger: GATGAGAAATGAATATGAGCGGCAGTGCAGGGTACTACAAGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGAATATCGTGCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS CCA 90 bp TTTCTCGATCTGCTGTCTCACAGGTCGCTTTGTGAATGTTCTCCATaGCTAGAAGCTTGGACATCATTTCCTGCCTTTCCTGGTCATGTT +
Preference number: 5 (lower is better)
Translates to: FLDLLSHRSLCECSP*LEAWTSFPAFPGHV
Trigger: AACATGACCAGGAAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGAGAACATTCACAAAGCGACCTGTGAGACAGCAGATCGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS CCA 90 bp TTTGTCATTTTTCTCAATTTTAGCTGCCACACCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCTTCCTGCCAGGTGTCCAGTATTCTC +
Preference number: 5 (lower is better)
Translates to: FVIFLNFSCHTFRIS*LFSMPSSCQVSSIL
Trigger: GAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGTGTGGCAGCTAAAATTGAGAAAAATGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474937.1
CDS-3UTR CAA 90 bp CTTCTTCATCCAGTGGCTCAATCACCGTCACTTCAGGAAACTCCTCCACGGACTGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: LLHPVAQSPSLQETPPRTESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...AGTCCGTGGAGGAGTTTCCTGAAGTGACGGTGATTGAGCCACTGGATGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATTGCTGATGAGGTaGTGGTACGTCGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSLLMR*WYVVHS
Trigger: AGAGTGGACGACGTACCACAACCTCATCAGCAATGA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHESQWY*SLLMRL
Trigger: CAACCTCATCAGCAATGACAAGTACCATTGGCTTTC...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTGAGGCCATTAAAGACTaGAGCTTCTCGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGEAIKD*SFSALS
Trigger: GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTC...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTTATCTTCGAGCTCCAGTCTGAGGCAACATATGTCCCTGTGATGTTGTTCTTTTCCAGTTTCCTGAGGTaGTACTCATTCCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: FIFELQSEATYVPVMLFFSSFLR*YSFRRS
Trigger: AGAGCGGCGGAATGAGTACAACCTCAGGAAACTGGA...AAAGAACAACATCACAGGGACATATGTTGCCTCAGACTGGAGCTCGAAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGCTGCTATTCGCTCCTaGTACTCTTCATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGAAIRS*YSSSSF
Trigger: GAAACTGGATGAAGAGTACAAGGAGCGAATAGCAGC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCCTGAGCACTCTGCCTaGTGCACGATATTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKPEHSA*CTIFFQ
Trigger: CTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCTATGTCCCTGTGATGTaGTTCTTTCATCTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCYVPVM*FFHLFN
Trigger: ATTGAACAGATGAAAGAACAACATCACAGGGACATA...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGTTCTCCTGTGCCTTCTaGCAGCTGACCACGGTTTCG +
Preference number: 5 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEFSCAF*QLTTVS
Trigger: CGAAACCGTGGTCAGCTGCAAGAAGGCACAGGAGAA...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCTTGAGCACTGCTGCTaGCCCCTGAAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKLEHCC*PLKFSN
Trigger: ATTGCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGCCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GAGTTCTTCAACGGAAGCCTGAGCACTCTGCCTTGTGCACGATATTCTTCCAGCAACACTAGAGATTTTTaGCTGGAAGTCAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: EFFNGSLSTLPCARYSSSNTRDF*LEVREI
Trigger: GATCTCTCTGACTTCCAGCAAAAAATCTCTAGTGTT...GCTGGAAGAATATCGTGCACAAGGCAGAGTGCTCAGGCTTCCGTTGAAGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS-3UTR CAA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTTTCCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFFPCGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGGAAA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTGGTGTGTGTGCATGGGTGGGTGTGTGCATCTGTCTGCCATGGTAAGAAATGCCTGTTCAAATGTTCTTaGTATGTTTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: VVCVHGWVCASVCHGKKCLFKCS*YVFSSI
Trigger: GATGCTGGAGAAAACATACAAAGAACATTTGAACAG...GCATTTCTTACCATGGCAGACAGATGCACACACCCACCCATGCACACACACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGTCAGACAGCAGGCTTaGCTGGGTTTCAGATACATT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGVRQQA*LGFRYI
Trigger: AATGTATCTGAAACCCAGCAAAGCCTGCTGTCTGAC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CTCTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: LCCFLSLFSHFQSFQQLGSVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...GCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGAAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRSVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TCTCCACCAGGCTTGTCAGCTGCTCCTGGTGAAACTGCTCTAGTTCCTGAGTCACAAAAATTCAAAGGTTaGCTTCATCAGTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: SPPGLSAAPGETALVPESQKFKG*LHQCEL
Trigger: GAGTTCACACTGATGAAGCAAACCTTTGAATTTTTG...TGACTCAGGAACTAGAGCAGTTTCACCAGGAGCAGCTGACAAGCCTGGTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATATCTCTTCCTATGCCTaGGAAGCCTATGACTTCATG +
Preference number: 5 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHISSYA*EAYDFM
Trigger: CATGAAGTCATAGGCTTCCAAGGCATAGGAAGAGAT...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAGGAATCCAGCAGAAAGAACCATGGCAACTGCTGGGCACTGGAAAGCACCCCAACTGAACCTCCTTTATaGGTAGATTATGGCAATATG +
Preference number: 5 (lower is better)
Translates to: KESSRKNHGNCWALESTPTEPPL*VDYGNM
Trigger: CATATTGCCATAATCTACCAATAAAGGAGGTTCAGT...TGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGGTTCTTTCTGCTGGATTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS GCA 90 bp TTAGGTCTTCCAGGTCTTGGAGTAGCTGCTGTCTCTCGACGACCATaGTGTTCAAATGTTCTTTGTATGTTTTCTCCAGCATCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LGLPGLGVAAVSRRP*CSNVLCMFSPASLS
Trigger: AGAGAGAGATGCTGGAGAAAACATACAAAGAACATTTGAACAGCATGGTCGTCGAGAGACAGCAGCTACTCCAAGACCTGGAAGACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCATACTCCTCACTGCGTaGCGTCTTCCAGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESAILLTA*RLPVLT
Trigger: AGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTAT...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCCTCTTCTATCCAGTCTaGGGGAGGGGAAGATCCACT +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSLFYPV*GRGRST
Trigger: AGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGAG...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTTGAGCTTCTCGGCCTaGTCCAGATCTGACCGTAGC +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLSFSA*SRSDRS
Trigger: GCTACGGTCAGATCTGGACAAGGCCGAGAAGCTCAA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTCCAGTTTCCTGAGGTaGTACTCATTCCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSSFLR*YSFRRS
Trigger: AGAGCGGCGGAATGAGTACAACCTCAGGAAACTGGA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTGCTGCTATTCGCTCCTaGTACTCTTCATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFAAIRS*YSSSSF
Trigger: GAAACTGGATGAAGAGTACAAGGAGCGAATAGCAGC...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTGCAGCCTCAGCTTCTCCTGCAGGTGAGTCTTTTCCTCCTCAAGCTTCACTTGTATGTCCCTGTGATGTaGTTCTTTCATCTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: LQPQLLLQVSLFLLKLHLYVPVM*FFHLFN
Trigger: ATTGAACAGATGAAAGAACAACATCACAGGGACATA...CAAGTGAAGCTTGAGGAGGAAAAGACTCACCTGCAGGAGAAGCTGAGGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTTTCATCCGGGACATTaGCAGGTTTACATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGFHPGH*QVYILH
Trigger: GTGCAGAATGTAAACCTGCAAATGTCCCGGATGAAA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMEPLIL*PKQLLF
Trigger: GAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCGTCAGACAGCAGGCTTaGCTGGGTTTCAGATACATT +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASVRQQA*LGFRYI
Trigger: AATGTATCTGAAACCCAGCAAAGCCTGCTGTCTGAC...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCGTCAGACAGCAGGCTTaGCTGGGTTTCAGATACATT +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVVRQQA*LGFRYI
Trigger: AATGTATCTGAAACCCAGCAAAGCCTGCTGTCTGAC...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVSVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLSNSS*SRASCW
Trigger: CCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGTGTCAGTCTCTCTTCTaGCAGGAAGAACTCAGCACT +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKCQSLF*QEELST
Trigger: AGTGCTGAGTTCTTCCTGCAAGAAGAGAGACTGACA...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGTGTCAGTCTAGCCTaGAGCTCCATCTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCVSLA*SSISCC
Trigger: GCAACATGAGATGGAGCTCAAGGCTAGACTGACACA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTCTCCCGCTCAAAGCTaGCTTGAGCCTGTGTCAGTC +
Preference number: 5 (lower is better)
Translates to: PGIYQSELFGLLSHENKQSPAQS*LEPVSV
Trigger: GACTGACACAGGCTCAAGCAAGCTTTGAGCGGGAGA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAAGGTGGTTTTCCTGTaGCACAATATGGGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: SGKSYLALLDLRWHANDYKVVFL*HNMGLY
Trigger: ATACAGACCCATATTGTGCAACAGGAAAACCACCTT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVEPLIL*PKQLLF
Trigger: GAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTC...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTGCGTGAGTTCGGCTTaGGTGTTCTGTACCATGGTC +
Preference number: 5 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFCVSSA*VFCTMV
Trigger: GACCATGGTACAGAACACCAAAGCCGAACTCACGCA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTTCCCTGTGGTGTGTaGGTTTCGGAGGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSFPCGV*VSEVLF
Trigger: AAACAGGACCTCCGAAACCAACACACCACAGGGAAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESAHDSYQ*FLVSLW
Trigger: CCACAGGGAAACCAGGAACAACTGGTAACTGTCATG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTACAACAGCTTATATTaGGGAGAAGCCTCAGGGATT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGYNSLY*GEASGI
Trigger: AATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGTA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTTGATTCTGTACTCTaGGCCTTTCTTGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLDSVL*AFLDVS
Trigger: AGACACATCAAGAAAGGCCAAGAGTACAGAATCAAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCACTTACTCCAAAGTGGTTaGTTCAGTGCTTTCCCTATA +
Preference number: 5 (lower is better)
Translates to: GKSYLALLDLRWHANDYHLLQSG*FSAFPI
Trigger: TATAGGGAAAGCACTGAACAAACCACTTTGGAGTAA...GTGATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SGKSYLALLDLRWHANDYRQFTV*FPEFLR
Trigger: CCTCAAGAACTCAGGGAACAATACTGTAAACTGTCT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTGTTGTTGTGATGAACTaGGAAAGTGCCCTGCACCTA +
Preference number: 5 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGVVVMN*ESALHL
Trigger: TAGGTGCAGGGCACTTTCCAAGTTCATCACAACAAC...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAGTCTTCCACCAACTGCTGGCGGAAGTGGCTAGCAGAGATTATAATTGGAAGACCCATAAAGCAGTGCTaGATTTTGCTGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: KSSTNCWRKWLAEIIIGRPIKQC*ILLFTF
Trigger: AAAGGTGAACAGCAAAATCAAGCACTGCTTTATGGG...TCTTCCAATTATAATCTCTGCTAGCCACTTCCGCCAGCAGTTGGTGGAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCATCTCTTCCTATGCCTaGGAAGCCTATGACTTCATG +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASISSYA*EAYDFM
Trigger: CATGAAGTCATAGGCTTCCAAGGCATAGGAAGAGAT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCGCACTTAGCCTTGCCTaGACTGGAAATACCTTTAAG +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASALSLA*TGNTFK
Trigger: CTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTGC...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp ATTGAGAGAGGAGATGTTGCCTGCTGCATTTCCTTTATTTTACTCTaGAGTCTGGAGATTTCTGTGCTCATCTCGGCTCTTTCTCGATCT +
Preference number: 5 (lower is better)
Translates to: IERGDVACCISFILL*SLEISVLISALSRS
Trigger: AGATCGAGAAAGAGCCGAGATGAGCACAGAAATCTCCAGACTTCAGAGTAAAATAAAGGAAATGCAGCAGGCAACATCTCCTCTCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 90 bp CTCAATGCTCATATTCAATGGATTGCATTCTTCAGAACCGAGCCCTaGAAACACATGGGACTCATTGATCCTGCAGCAGGTTCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: LNAHIQWIAFFRTEP*KHMGLIDPAAGSFN
Trigger: ATTGAAAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGAATGCAATCCATTGAATATGAGCATTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATAATCTTCTACACTCATaGTACCGTCAGGATCAAGAT +
Preference number: 5 (lower is better)
Translates to: SGKSYLALLDLRWHANDYNLLHS*YRQDQD
Trigger: ATCTTGATCCTGACGGTACAATGAGTGTAGAAGATT...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTCATTGCTGATGAGGTaGTGGTACGTCGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLSLLMR*WYVVHS
Trigger: AGAGTGGACGACGTACCACAACCTCATCAGCAATGA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTGAGGCCATTAAAGACTaGAGCTTCTCGGCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIEAIKD*SFSALS
Trigger: GGACAAGGCCGAGAAGCTCAAGTCTTTAATGGCCTC...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGCTGCTATTCGCTCCTaGTACTCTTCATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSAAIRS*YSSSSF
Trigger: GAAACTGGATGAAGAGTACAAGGAGCGAATAGCAGC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTGTCAGTCTCTCTTCTaGCAGGAAGAACTCAGCACT +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMCQSLF*QEELST
Trigger: AGTGCTGAGTTCTTCCTGCAAGAAGAGAGACTGACA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCTGTCAGTCTCTCTTCTaGCAGGAAGAACTCAGCACT +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESACQSLF*QEELST
Trigger: AGTGCTGAGTTCTTCCTGCAAGAAGAGAGACTGACA...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATTATGTCCCTGTGATGTaGTTCTTTCATCTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHYVPVM*FFHLFN
Trigger: ATTGAACAGATGAAAGAACAACATCACAGGGACATA...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCTTGAGCACTGCTGCTaGCCCCTGAAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILEHCC*PLKFSN
Trigger: ATTGCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTTTAATTATGTGGCTTTATCCGTTTCTTAGAAGACCAGCTCCCCAAATGAAATGTGTCAGTCTAGCCTaGAGCTCCATCTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: ALIMWLYPFLRRPAPQMKCVSLA*SSISCC
Trigger: GCAACATGAGATGGAGCTCAAGGCTAGACTGACACA...TTTCATTTGGGGAGCTGGTCTTCTAAGAAACGGATAAAGCCACATAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCCCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGCCGCTCAAAGCTTGCTaGAGCCTGTGTCAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLPLKAC*SLCQSS
Trigger: GCTAGACTGACACAGGCTCAAGCAAGCTTTGAGCGG...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTACAGTTTCCGTTTTTaGCCACATTTCTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGYSFRF*PHFFLR
Trigger: TCTCAGGAAGAAATGTGGCAAAAAACGGAAACTGTA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATTACAGTTTCCGTTTTTaGCCACATTTCTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SGKSYLALLDLRWHANDYYSFRF*PHFFLR
Trigger: TCTCAGGAAGAAATGTGGCAAAAAACGGAAACTGTA...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTCAGATTAAACTTCTCTaGTTCCCGTTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGQIKLL*FPFLQC
Trigger: GCATTGGAGGAACGGGAACAAGAGAAGTTTAATCTG...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCAAGGTGGTTTTCCTGTaGCACAATATGGGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVKVVFL*HNMGLY
Trigger: ATACAGACCCATATTGTGCAACAGGAAAACCACCTT...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGAACACTAGAGATTTTTaGCTGGAAGTCAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGNTRDF*LEVREI
Trigger: GATCTCTCTGACTTCCAGCAAAAAATCTCTAGTGTT...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGGAGCCTCTCATTCTCTaGCCAAAGCAGCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PGIYQSELFGLLSHENKQEPLIL*PKQLLF
Trigger: GAACAGCAGCTGCTTTGGCAAGAGAATGAGAGGCTC...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTCCATGGCTAGAAGCTaGGACATCATTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMSMARS*DIISCL
Trigger: AAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCTCTGCTGTTTTTACAACAGCTTATATTaGGGAGAAGCCTCAGGGATT +
Preference number: 5 (lower is better)
Translates to: TEAGNLLLQEVIFLLCCFYNSLY*GEASGI
Trigger: AATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGTA...AAAACAGCAGAGAAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTACAACAGCTTATATTaGGGAGAAGCCTCAGGGATT +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVYNSLY*GEASGI
Trigger: AATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGTA...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp ATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGGTGGGTCAGCTCCTGTAACTTaGTTTTCTCCAGTTCTAACT +
Preference number: 5 (lower is better)
Translates to: IPTYLSLCLCVWCVCMGGSAPVT*FSPVLT
Trigger: AGTTAGAACTGGAGAAAACAAAGTTACAGGAGCTGA...CCCACCCATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASRQFTV*FPEFLR
Trigger: CCTCAAGAACTCAGGGAACAATACTGTAAACTGTCT...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTGTTTTCTGTCGCTGTTCAGTCACTTCCAGAGCTTTCAACAACTGGGCATCTGTTCTATAAAGTTTaGATCTTGAGCATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: LLFSVAVQSLPELSTTGHLFYKV*ILSMSG
Trigger: TCCACTCATGCTCAAGATCAAAACTTTATAGAACAG...ATGCCCAGTTGTTGAAAGCTCTGGAAGTGACTGAACAGCGACAGAAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCCCATAAAGCAGTGCTaGATTTTGCTGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHPIKQC*ILLFTF
Trigger: AAAGGTGAACAGCAAAATCAAGCACTGCTTTATGGG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TATGACCTCAAAGGAGGTGTAGAAGTCAATGGCGCTGGTGTCAGATTCCTAACTCTTGATTCCCTTTTCTaGAAACGAAGATCCCATCTT +
Preference number: 5 (lower is better)
Translates to: YDLKGGVEVNGAGVRFLTLDSLF*KRRSHL
Trigger: AAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAAG...AGTTAGGAATCTGACACCAGCGCCATTGACTTCTACACCTCCTTTGAGGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS CCA 90 bp ATATTCAATGGATTGCATTCTTCAGAACCGAGCCCTGAAAACACATaGGACTCATTGATCCTGCAGCAGGTTCTTTCAATAACACAGTGT +
Preference number: 5 (lower is better)
Translates to: IFNGLHSSEPSPENT*DSLILQQVLSITQC
Trigger: ACACTGTGTTATTGAAAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGAATGCAATCCATTGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTCACCATTGCGTCTGCCTTAGTGTTCTTGCAGAGTTGTTCTTTGAGCTGATTGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: LHHCVCLSVLAELFFELIESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...AATCAGCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGACGCAATGGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAGTGTTCTTCATTaGACAGAGTTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHESVLH*TEFWTR
Trigger: TCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTC...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCATACTCCTCACTGCGTaGCGTCTTCCAGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFILLTA*RLPVLT
Trigger: AGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTAT...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMESQWY*SLLMRL
Trigger: CAACCTCATCAGCAATGACAAGTACCATTGGCTTTC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSESQWY*SLLMRL
Trigger: CAACCTCATCAGCAATGACAAGTACCATTGGCTTTC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTESQWY*SLLMRL
Trigger: CAACCTCATCAGCAATGACAAGTACCATTGGCTTTC...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCGTTAATTCTGTCAAATaGATGTTTCCATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASVNSVK*MFPSRL
Trigger: CAGCCTCGATGGAAACATCAATTTGACAGAATTAAC...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTCCAGTTTCCTGAGGTaGTACTCATTCCGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFSSFLR*YSFRRS
Trigger: AGAGCGGCGGAATGAGTACAACCTCAGGAAACTGGA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTTGAGCACTGCTGCTaGCCCCTGAAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLEHCC*PLKFSN
Trigger: ATTGCTGAACTTCAGGGGCAAGCAGCAGTGCTCAAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCCAGATTAAACTTCTCTaGTTCCCGTTCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESAQIKLL*FPFLQC
Trigger: GCATTGGAGGAACGGGAACAAGAGAAGTTTAATCTG...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTGCTTTTCATAATGGCGCACTTTATCTTCGAGCTCCAGTCTGAGGCAACATATCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 5 (lower is better)
Translates to: LLFIMAHFIFELQSEATYLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...ATATGTTGCCTCAGACTGGAGCTCGAAGATAAAGTGCGCCATTATGAAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTTTCATCCGGGACATTaGCAGGTTTACATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTFHPGH*QVYILH
Trigger: GTGCAGAATGTAAACCTGCAAATGTCCCGGATGAAA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSHDSYQ*FLVSLW
Trigger: CCACAGGGAAACCAGGAACAACTGGTAACTGTCATG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTCCATGGCTAGAAGCTaGGACATCATTTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLSMARS*DIISCL
Trigger: AAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAACCACTCTGAAGCATaGAGAGAGGAGATGTTGCCT +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLNHSEA*REEMLP
Trigger: AGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATAAGGTACTGGTTTTCTaGCTTACATTCCTCTATGAC +
Preference number: 5 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHKVLVF*LTFLYD
Trigger: GTCATAGAGGAATGTAAGCAAGAAAACCAGTACCTT...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTTTCCTCCAGTATAACTaGATTCTGTACTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGFLQYN*ILYSWP
Trigger: AGGCCAAGAGTACAGAATCAAGTTATACTGGAGGAA...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476352.5
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKSVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGCCCATAAAGCAGTGCTaGATTTTGCTGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKPIKQC*ILLFTF
Trigger: AAAGGTGAACAGCAAAATCAAGCACTGCTTTATGGG...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AGTGGAAAGTCCTATTTGGCACTCCTTGACCTCAGGTGGCATGCCAATGATTATCAAAAATTCAAAGGTTaGCTTCATCAGTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: SGKSYLALLDLRWHANDYQKFKG*LHQCEL
Trigger: GAGTTCACACTGATGAAGCAAACCTTTGAATTTTTG...ATAATCATTGGCATGCCACCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGCACTTAGCCTTGCCTaGACTGGAAATACCTTTAAG +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSALSLA*TGNTFK
Trigger: CTTAAAGGTATTTCCAGTCAAGGCAAGGCTAAGTGC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATCATTGCTGATGAGGTaGTGGTACGTCGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRSLLMR*WYVVHS
Trigger: AGAGTGGACGACGTACCACAACCTCATCAGCAATGA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AAAGTGCACAAATATGAGTGTACCCTTTGGTTTGGCTATGACCTCAAAGGAGGTGTTAATTCTGTCAAATaGATGTTTCCATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KVHKYECTLWFGYDLKGGVNSVK*MFPSRL
Trigger: CAGCCTCGATGGAAACATCAATTTGACAGAATTAAC...ACCTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACTCATATTTGTGCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGTTCGTTCTCATGCCTTaGCTTCATGTTCTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: PGIYQSELFGLLSHENKQFVLMP*LHVLLC
Trigger: GCACAGGAGAACATGAAGCAAAGGCATGAGAACGAA...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCTGTGTCAGTCTAGCCTaGAGCTCCATCTCATGTTGC +
Preference number: 5 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFCVSLA*SSISCC
Trigger: GCAACATGAGATGGAGCTCAAGGCTAGACTGACACA...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp AGATGGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCACGTTGATTAAGTTCTaGCAGTTTTTCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RWAWPSRNISKRTFRIIVTLIKF*QFFLVL
Trigger: CAAAACCAGGAAAAACTGCAAGAACTTAATCAACGT...GACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCTTTCATCCGGGACATTaGCAGGTTTACATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLFHPGH*QVYILH
Trigger: GTGCAGAATGTAAACCTGCAAATGTCCCGGATGAAA...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 5 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGTTCCTCCAGTATAACTaGATTCTGTACTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMFLQYN*ILYSWP
Trigger: AGGCCAAGAGTACAGAATCAAGTTATACTGGAGGAA...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCTCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTAGTGTACCCTTTGGTTaGGCTATGACCTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISVPFG*AMTSKE
Trigger: CTCCTTTGAGGTCATAGCCAAACCAAAGGGTACACT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGTGGAAAGTCCTATTaGGCACTCCTTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRSGKSY*ALLDLR
Trigger: CCTGAGGTCAAGGAGTGCCAAATAGGACTTTCCACT...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCTATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCTGTTCTATAAAGTTTaGATCTTGAGCATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASLFYKV*ILSMSG
Trigger: TCCACTCATGCTCAAGATCAAAACTTTATAGAACAG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGGCTTGGCCCTCCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATCCAACAGCAATAACTTaGAGTAACTTGACACATATC +
Preference number: 5 (lower is better)
Translates to: GLGPPGIYQSELFGLLSHPTAIT*SNLTHI
Trigger: GATATGTGTCAAGTTACTCAAAGTTATTGCTGTTGG...ATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGGAGGGCCAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATTTGGGTTTGTCTGATGTCAGCGGTTAATAACCACTTAATAAGCCCTGCCTCCCCAACAGCAATAACTTaGAGTAACTTGACACATATC +
Preference number: 5 (lower is better)
Translates to: IWVCLMSAVNNHLISPASPTAIT*SNLTHI
Trigger: GATATGTGTCAAGTTACTCAAAGTTATTGCTGTTGG...GGAGGCAGGGCTTATTAAGTGGTTATTAACCGCTGACATCAGACAAACCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGAATCTTCTACACTCATaGTACCGTCAGGATCAAGAT +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMNLLHS*YRQDQD
Trigger: ATCTTGATCCTGACGGTACAATGAGTGTAGAAGATT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGGTTAATTCTGTCAAATaGATGTTTCCATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMVNSVK*MFPSRL
Trigger: CAGCCTCGATGGAAACATCAATTTGACAGAATTAAC...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp CCTAACTATATTACTGAGGCTGGCAATCTTCTCCTCCAGGAGGTAATTTTTCTTGTTAATTCTGTCAAATaGATGTTTCCATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PNYITEAGNLLLQEVIFLVNSVK*MFPSRL
Trigger: CAGCCTCGATGGAAACATCAATTTGACAGAATTAAC...AAGAAAAATTACCTCCTGGAGGAGAAGATTGCCAGCCTCAGTAATATAGTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GGATTATTGTCTCATGAAAACAAGCAGGTTGTTGTGATGAACTTGGAAAGTGCCGTTAATTCTGTCAAATaGATGTTTCCATCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLLSHENKQVVVMNLESAVNSVK*MFPSRL
Trigger: CAGCCTCGATGGAAACATCAATTTGACAGAATTAAC...GGCACTTTCCAAGTTCATCACAACAACCTGCTTGTTTTCATGAGACAATAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGCTGCTATTCGCTCCTaGTACTCTTCATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRAAIRS*YSSSSF
Trigger: GAAACTGGATGAAGAGTACAAGGAGCGAATAGCAGC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TGCTGTTCACCTTTTGTAAATAGATGGGCTTGGCCCTCCAGGAATATATCAAAGACGTTGATTAAGTTCTaGCAGTTTTTCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: CCSPFVNRWAWPSRNISKTLIKF*QFFLVL
Trigger: CAAAACCAGGAAAAACTGCAAGAACTTAATCAACGT...CTTTGATATATTCCTGGAGGGCCAAGCCCATCTATTTACAAAAGGTGAACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGAAGGTGGTTTTCCTGTaGCACAATATGGGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVKVVFL*HNMGLY
Trigger: ATACAGACCCATATTGTGCAACAGGAAAACCACCTT...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCTTGATGTGTCTGAATaGTTCCATGTAACCAGGCAA +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLLDVSE*FHVTRQ
Trigger: TTGCCTGGTTACATGGAACAATTCAGACACATCAAG...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTCAGCTCCTGTAACTTaGTTTTCTCCAGTTCTAACT +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSSAPVT*FSPVLT
Trigger: AGTTAGAACTGGAGAAAACAAAGTTACAGGAGCTGA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTTACTCCAAAGTGGTTaGTTCAGTGCTTTCCCTATA +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSLLQSG*FSAFPI
Trigger: TATAGGGAAAGCACTGAACAAACCACTTTGGAGTAA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLRQFTV*FPEFLR
Trigger: CCTCAAGAACTCAGGGAACAATACTGTAAACTGTCT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAGTTGTTGTGATGAACTaGGAAAGTGCCCTGCACCTA +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRVVVMN*ESALHL
Trigger: TAGGTGCAGGGCACTTTCCAAGTTCATCACAACAAC...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCAATCTTCTACACTCATaGTACCGTCAGGATCAAGAT +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLNLLHS*YRQDQD
Trigger: ATCTTGATCCTGACGGTACAATGAGTGTAGAAGATT...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTTACAACGTTCCAGTTCTTCTTTCAGATTAAACTTCTCTTGTTCCCGTTCAATCTTCTACACTCATaGTACCGTCAGGATCAAGAT +
Preference number: 5 (lower is better)
Translates to: HFTTFQFFFQIKLLLFPFNLLHS*YRQDQD
Trigger: ATCTTGATCCTGACGGTACAATGAGTGTAGAAGATT...GAACGGGAACAAGAGAAGTTTAATCTGAAAGAAGAACTGGAACGTTGTAAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCTATGTCCCTGTGATGTaGTTCTTTCATCTGTTCAAT +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSYVPVM*FFHLFN
Trigger: ATTGAACAGATGAAAGAACAACATCACAGGGACATA...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTACAGTTTCCGTTTTTaGCCACATTTCTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLYSFRF*PHFFLR
Trigger: TCTCAGGAAGAAATGTGGCAAAAAACGGAAACTGTA...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGTACAGTTTCCGTTTTTaGCCACATTTCTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVYSFRF*PHFFLR
Trigger: TCTCAGGAAGAAATGTGGCAAAAAACGGAAACTGTA...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CACTTAATTCCAACATATCTTAGCTTATGTCTCTGTGTGTGGTGTGTGTGCATGACGTTGATTAAGTTCTaGCAGTTTTTCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: HLIPTYLSLCLCVWCVCMTLIKF*QFFLVL
Trigger: CAAAACCAGGAAAAACTGCAAGAACTTAATCAACGT...CATGCACACACACCACACACAGAGACATAAGCTAAGATATGTTGGAATTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453196.6
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGAACACTAGAGATTTTTaGCTGGAAGTCAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLNTRDF*LEVREI
Trigger: GATCTCTCTGACTTCCAGCAAAAAATCTCTAGTGTT...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGCTAAAAGACTTGATTTaGCCAACTTATCGACACAGC +
Preference number: 5 (lower is better)
Translates to: MVCLSLFSKSSYLLQSGLLKDLI*PTYRHS
Trigger: GCTGTGTCGATAAGTTGGCAAAATCAAGTCTTTTAG...CAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCCTGTTAGCAGGAGATaGTTCTTTCTGAAACTGATC +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIPVSRR*FFLKLI
Trigger: GATCAGTTTCAGAAAGAACAATCTCCTGCTAACAGG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTTACTCTTGGCCTTTCTaGATGTGTCTGAATTGTTCC +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIYSWPF*MCLNCS
Trigger: GGAACAATTCAGACACATCAAGAAAGGCCAAGAGTA...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTAGTGTTCTTGCAGAGTaGTTCTTTGAGCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLISVLAE*FFELIH
Trigger: GTGAATCAGCTCAAAGAACAACTCTGCAAGAACACT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATCTGCCTTAGTGTTCTaGCAGAGTTGTTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRSALVF*QSCSLS
Trigger: GCTCAAAGAACAACTCTGCAAGAACACTAAGGCAGA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCTATAAAGTTTTGATCTaGAGCATGAGTGGAAAGTCC +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTYKVLI*SMSGKS
Trigger: GGACTTTCCACTCATGCTCAAGATCAAAACTTTATA...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCCCTGCCTCCTAACCAATTATACTCTACTAATTGTCTACCAATTCAAAGAACCCTGTTCTATAAAGTTTaGATCTTGAGCATGAGTGGA +
Preference number: 5 (lower is better)
Translates to: ALPPNQLYSTNCLPIQRTLFYKV*ILSMSG
Trigger: TCCACTCATGCTCAAGATCAAAACTTTATAGAACAG...GGTTCTTTGAATTGGTAGACAATTAGTAGAGTATAATTGGTTAGGAGGCAGGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCTTTCCGAACTTTTCGGATTATaGTCTCATGAAAACAAGCAG +
Preference number: 5 (lower is better)
Translates to: PSFLRVAIYSKVVCSVLSELFGL*SHENKQ
Trigger: CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTC...GGAAAGCACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp TTTGCAGGTTTACATTCTGCACGGTGTCTTCTAAATTCTGAACCTTTTCCTGAGGAACTTTTCGGATTATaGTCTCATGAAAACAAGCAG +
Preference number: 5 (lower is better)
Translates to: FAGLHSARCLLNSEPFPEELFGL*SHENKQ
Trigger: CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTC...CTCAGGAAAAGGTTCAGAATTTAGAAGACACCGTGCAGAATGTAAACCTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCAGGAATATATCAAAGCGAACTTTTCGGATTATTGTCTCATGAAAACAAGCAGCCCATAAAGCAGTGCTaGATTTTGCTGTTCACCTTT +
Preference number: 5 (lower is better)
Translates to: PGIYQSELFGLLSHENKQPIKQC*ILLFTF
Trigger: AAAGGTGAACAGCAAAATCAAGCACTGCTTTATGGG...CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTCGCTTTGATATATTCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp AAAATTTCCCCAAATCATATCCTTCCATGTACAAGGAAACAAGGATaGAAGCAGTTACCATTCAGCTTCACTCTACTCATTCCAAGAATG +
Preference number: 5 (lower is better)
Translates to: KISPNHILPCTRKQG*KQLPFSFTLLIPRM
Trigger: CATTCTTGGAATGAGTAGAGTGAAGCTGAATGGTAACTGCTTTCATCCTTGTTTCCTTGTACATGGAAGGATATGATTTGGGGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463419.1
CDS-3UTR CAA 90 bp CAGAAAACCTACATGGTCTGCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCACGTTGATTAAGTTCTaGCAGTTTTTCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: QKTYMVCLSLFSKSSYLLTLIKF*QFFLVL
Trigger: CAAAACCAGGAAAAACTGCAAGAACTTAATCAACGT...GAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGCAGACCATGTAGGTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTAAGGTACTGGTTTTCTaGCTTACATTCCTCTATGAC +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLIKVLVF*LTFLYD
Trigger: GTCATAGAGGAATGTAAGCAAGAAAACCAGTACCTT...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTTGATGTGTCTGAATaGTTCCATGTAACCAGGCAA +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLDVSE*FHVTRQ
Trigger: TTGCCTGGTTACATGGAACAATTCAGACACATCAAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTTGATTCTGTACTCTaGGCCTTTCTTGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLDSVL*AFLDVS
Trigger: AGACACATCAAGAAAGGCCAAGAGTACAGAATCAAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTCCTCCAGTATAACTaGATTCTGTACTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLFLQYN*ILYSWP
Trigger: AGGCCAAGAGTACAGAATCAAGTTATACTGGAGGAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCAGACAGTTTACAGTATaGTTCCCTGAGTTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFRQFTV*FPEFLR
Trigger: CCTCAAGAACTCAGGGAACAATACTGTAAACTGTCT...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GCTTATCCCTCTTTTCTAAGAGTAGCTATTTACTCCAAAGTGGTTTGTTCAGTGCAAAAATTCAAAGGTTaGCTTCATCAGTGTGAACTC +
Preference number: 5 (lower is better)
Translates to: AYPSFLRVAIYSKVVCSVQKFKG*LHQCEL
Trigger: GAGTTCACACTGATGAAGCAAACCTTTGAATTTTTG...CACTGAACAAACCACTTTGGAGTAAATAGCTACTCTTAGAAAAGAGGGATAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCTTGATTCCCTTTTCTaGAAACGAAGATCCCATCTT +
Preference number: 5 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSLDSLF*KRRSHL
Trigger: AAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAAG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp ATGATAAATGGAAACTCCAGTTGTGTTGCTGGCAGTTTTAGGTTAGGCTTAATTCTTGATTCCCTTTTCTaGAAACGAAGATCCCATCTT +
Preference number: 5 (lower is better)
Translates to: MINGNSSCVAGSFRLGLILDSLF*KRRSHL
Trigger: AAGATGGGATCTTCGTTTCAAGAAAAGGGAATCAAG...AATTAAGCCTAACCTAAAACTGCCAGCAACACAACTGGAGTTTCCATTTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 90 bp TACAAAAATGAACAGCATGGTCCTCAAGGAATTATCACTGGTTCTTaGAAGTGTTCTTCATTTGACAGAGTTCTGGACAAGATGAGTATT +
Preference number: 5 (lower is better)
Translates to: YKNEQHGPQGIITGS*KCSSFDRVLDKMSI
Trigger: AATACTCATCTTGTCCAGAACTCTGTCAAATGAAGAACACTTTCAAGAACCAGTGATAATTCCTTGAGGACCATGCTGTTCATTTTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673852.1
CDS-3UTR CAA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCACGTTGATTAAGTTCTaGCAGTTTTTCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSTLIKF*QFFLVL
Trigger: CAAAACCAGGAAAAACTGCAAGAACTTAATCAACGT...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAACACTAGAGATTTTTaGCTGGAAGTCAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLNTRDF*LEVREI
Trigger: GATCTCTCTGACTTCCAGCAAAAAATCTCTAGTGTT...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGATCTGCAGTGAGTTCTTaGTTATTTTCTAGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRSAVSS*LFSSAS
Trigger: TGAGGCACTAGAAAATAACAAAGAACTCACTGCAGA...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp CCTTTTCTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGTTACTCCAAAGTGGTTaGTTCAGTGCTTTCCCTATA +
Preference number: 5 (lower is better)
Translates to: PFLSVTYYLKGKLDSLFLLLQSG*FSAFPI
Trigger: TATAGGGAAAGCACTGAACAAACCACTTTGGAGTAA...CAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAGAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp GTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGAAGATCCCCAACAGCAATAACTTaGAGTAACTTGACACATATC +
Preference number: 5 (lower is better)
Translates to: VTYYLKGKLDSLFLKRRSPTAIT*SNLTHI
Trigger: GATATGTGTCAAGTTACTCAAAGTTATTGCTGTTGG...GGATCTTCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS-3UTR CAA 90 bp CTTAGTGTAACGTATTATCTCAAAGGCAAACTTGATTCCCTTTTCTTGAAACGACTGTTCAAATGTTCTTaGTATGTTTTCTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LSVTYYLKGKLDSLFLKRLFKCS*YVFSSI
Trigger: GATGCTGGAGAAAACATACAAAGAACATTTGAACAG...TCGTTTCAAGAAAAGGGAATCAAGTTTGCCTTTGAGATAATACGTTACACTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476352.5
ENST00000530997.7
CDS-3UTR CAA 90 bp TCTCTTGAAGAAGCCTTTTCACTAGTTTCAGTTTCTGTTCAACTTCTATCATTCGAACTTTTCGGATTATaGTCTCATGAAAACAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLEEAFSLVSVSVQLLSFELFGL*SHENKQ
Trigger: CTGCTTGTTTTCATGAGACAATAATCCGAAAAGTTC...GAATGATAGAAGTTGAACAGAAACTGAAACTAGTGAAAAGGCTTCTTCAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000476352.5
ENST00000673657.1
ENST00000674030.1
CDS GCA 72 bp TTCCAGCCGCTGGCTGGCCAGCTGCTCCGAAGCCCCTaGCTGGCACAGGACCTCCTCACGCTCCCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: FQPLAGQLLRSP*LAQDLLTLPQF
Trigger: GAACTGAGGGAGCGTGAGGAGGTCCTGTGCCAGGCAGGGGCTTCGGAGCAGCTGGCCAGCCAGCGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 72 bp CCACCTCCTCCAAGCTCAACATGTGGCAAAGGTCGGTaGGTTCCTCCTGCCCCAGGGACCCTGTGCCCGTCG +
Preference number: 6 (lower is better)
Translates to: PPPPSSTCGKGR*VPPAPGTLCPS
Trigger: CGACGGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACATGTTGAGCTTGGAGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CAA 72 bp CTCCTCACGCTGCTGTTCCTGGAGGTCCTTCAGCTCTaGGCGGTAGCGCCCCTCCAGGCTTTGCAGAGCGCT +
Preference number: 6 (lower is better)
Translates to: LLTLLFLEVLQL*AVAPLQALQSA
Trigger: AGCGCTCTGCAAAGCCTGGAGGGGCGCTACCGCCAAGAGCTGAAGGACCTCCAGGAACAGCAGCGTGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS CAA 90 bp CCCAGGGACCCTGTGCCCGTCGTGTCAAAACTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGGTCCTGCTCCACCTCATCCATCCCA +
Preference number: 6 (lower is better)
Translates to: PRDPVPVVSKLSNSS*SRASCWSCSTSSIP
Trigger: TGGGATGGATGAGGTGGAGCAGGACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAGTTTTGACACGACGGGCACAGGGTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CAA 90 bp CTGGGATTTCTCCTCACGCTGCTGTTCCTGGAGGTCCTTCAGCTCTaGGCGGTAGCGCCCCTCCAGGCTTTGCAGAGCGCTTTCACACCT +
Preference number: 6 (lower is better)
Translates to: LGFLLTLLFLEVLQL*AVAPLQALQSAFTP
Trigger: AGGTGTGAAAGCGCTCTGCAAAGCCTGGAGGGGCGCTACCGCCAAGAGCTGAAGGACCTCCAGGAACAGCAGCGTGAGGAGAAATCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 72 bp CTTCCAGTGCTCACTGCAGTCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATCCAGTGGCTCAATCAC +
Preference number: 6 (lower is better)
Translates to: LPVLTAVTGWDV*RPRFFIQWLNH
Trigger: GTGATTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCAGTGAGCACTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 72 bp AAGCTCAACATGTGGCAAAGGTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCCGTCGTGTCAAAACTG +
Preference number: 6 (lower is better)
Translates to: KLNMWQRSVSSS*PRDPVPVVSKL
Trigger: CAGTTTTGACACGACGGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACATGTTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 72 bp CTTAACTGGCCTTCCGCTTCATACTCCTCACTGCGTTaGGTCTTCCAGTGCTCACTGCAGTCACCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LNWPSASYSSLR*VFQCSLQSPAG
Trigger: CCCAGCCGGTGACTGCAGTGAGCACTGGAAGACGCAACGCAGTGAGGAGTATGAAGCGGAAGGCCAGTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CAA 72 bp CCTGTGCCCGTCGTGTCAAAACTGTCAAACAGCTCCTaGAGTCGGGCCTCATGCTGGTCCTGCTCCACCTCA +
Preference number: 6 (lower is better)
Translates to: PVPVVSKLSNSS*SRASCWSCSTS
Trigger: TGAGGTGGAGCAGGACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAGTTTTGACACGACGGGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CAA 72 bp CCGCCTCCAGCGCTCTGCAAAGCGAAGGAGGACGCTTaGTTAGGGCTGGAGAAACGGGACAATACTTCGCAG +
Preference number: 6 (lower is better)
Translates to: PPPALCKAKEDA*LGLEKRDNTSQ
Trigger: CTGCGAAGTATTGTCCCGTTTCTCCAGCCCTAACAAAGCGTCCTCCTTCGCTTTGCAGAGCGCTGGAGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453196.6
ENST00000463419.1
ENST00000496749.1
ENST00000673657.1
ENST00000674030.1
CDS CAA 72 bp GTGACCATTCAGGAGCGGCCCAGACACCCGAGCTACTaGTTGGCAGCTGACACCCACAGATGCTGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VTIQERPRHPSY*LAADTHRCWFL
Trigger: CAAGAACCAGCATCTGTGGGTGTCAGCTGCCAACAAGTAGCTCGGGTGTCTGGGCCGCTCCTGAATGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674061.1
CDS TCA 72 bp CTGTGCCCGTCGTGTCAAAACTGTCAAACAGCTCCTTaGGTCGGGCCTCATGCTGGTCCTGCTCCACCTCAT +
Preference number: 6 (lower is better)
Translates to: LCPSCQNCQTAP*VGPHAGPAPPH
Trigger: ATGAGGTGGAGCAGGACCAGCATGAGGCCCGACTCAAGGAGCTGTTTGACAGTTTTGACACGACGGGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000463419.1
ENST00000476352.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 72 bp CTCCAAAAGCTCACTGCAGTCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATCCAGTGGCTCAATCAC +
Preference number: 6 (lower is better)
Translates to: LQKLTAVTGWDV*RPRFFIQWLNH
Trigger: GTGATTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCAGTGAGCTTTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486950.5
CDS GCA 72 bp AAGCTCAACATGTGGCAAAGGTCGGTGAGTTCCTCCTaGCCCAGGGACCCTGTGCCCGTCGTGTCAAAACTT +
Preference number: 6 (lower is better)
Translates to: KLNMWQRSVSSS*PRDPVPVVSKL
Trigger: AAGTTTTGACACGACGGGCACAGGGTCCCTGGGGCAGGAGGAACTCACCGACCTTTGCCACATGTTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453401.6
CDS CCA 72 bp TCCTGCCAGGTGTCCAGTATTCTCTCCACAGATGCATaGCCCATCCCATCATCCAGGCAGGAGAAGACCCGA +
Preference number: 6 (lower is better)
Translates to: SCQVSSILSTDA*PIPSSRQEKTR
Trigger: TCGGGTCTTCTCCTGCCTGGATGATGGGATGGGCCATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 72 bp GGAGCGGCCCAGACACCCGAGCTACTTGTTGGCAGCTaGCACCCACAGATGCTGGTTCTTGAAAGTGTTCTT +
Preference number: 6 (lower is better)
Translates to: GAAQTPELLVGS*HPQMLVLESVL
Trigger: AAGAACACTTTCAAGAACCAGCATCTGTGGGTGTCAGCTGCCAACAAGTAGCTCGGGTGTCTGGGCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674061.1
CDS GCA 72 bp CTCTTCCTGCCAGGTGTCCAGTATTCTCTCCACAGATaGATGGCCCATCCCATCATCCAGGCAGGAGAAGAC +
Preference number: 6 (lower is better)
Translates to: LFLPGVQYSLHR*MAHPIIQAGED
Trigger: GTCTTCTCCTGCCTGGATGATGGGATGGGCCATGCATCTGTGGAGAGAATACTGGACACCTGGCAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 72 bp GGACCTCCTCACGCTCCCTCAGTTCCCTTTTGTGACTaGTCTTCAGCTCAAGTATCTGGTCAGACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: GPPHAPSVPFCD*SSAQVSGQTAG
Trigger: GCCTGCTGTCTGACCAGATACTTGAGCTGAAGAGCAGTCACAAAAGGGAACTGAGGGAGCGTGAGGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS GCA 72 bp TCCCGGACCTCATCATCTTCCAGGTCACTTAGGACATaGCGCCTGGTCACACCTTCTACTTGCTTCGTTCGG +
Preference number: 6 (lower is better)
Translates to: SRTSSSSRSLRT*RLVTPSTCFVR
Trigger: CCGAACGAAGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCTGGAAGATGATGAGGTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS GCA 72 bp GCTGCCACACCTTCAGGATCTCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGTCCAGTATTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: AATPSGSPGCSQ*PLPARCPVFSP
Trigger: TGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGTGTGGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474937.1
CDS CAA 72 bp ACCATTCAGGAGCGGCCCAGACACCCGAGCTACTTGTaGGCAGCTGACACCCACAGATGCTGGTTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: TIQERPRHPSYL*AADTHRCWFLK
Trigger: TTTCAAGAACCAGCATCTGTGGGTGTCAGCTGCCAACAAGTAGCTCGGGTGTCTGGGCCGCTCCTGAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674061.1
CDS CAA 90 bp CAGCTTGTGACCATTCAGGAGCGGCCCAGACACCCGAGCTACTTGTaGGCAGCTGACACCCACAGATGCTGGTTCTTGAAAGTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: QLVTIQERPRHPSYL*AADTHRCWFLKVFF
Trigger: GAAGAACACTTTCAAGAACCAGCATCTGTGGGTGTCAGCTGCCAACAAGTAGCTCGGGTGTCTGGGCCGCTCCTGAATGGTCACAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674061.1
CDS CAA 90 bp TGTCAGCTTGTGACCATTCAGGAGCGGCCCAGACACCCGAGCTACTaGTTGGCAGCTGACACCCACAGATGCTGGTTCTTGAAAGTGTTC +
Preference number: 6 (lower is better)
Translates to: CQLVTIQERPRHPSY*LAADTHRCWFLKVF
Trigger: GAACACTTTCAAGAACCAGCATCTGTGGGTGTCAGCTGCCAACAAGTAGCTCGGGTGTCTGGGCCGCTCCTGAATGGTCACAAGCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674061.1
CDS TCA 72 bp TTTATCACACTCACTGCAGTCACCGGCTGGGATGTGTaGAGGCCGCGCTTCTTCATCCAGTGGCTCAATCAC +
Preference number: 6 (lower is better)
Translates to: FITLTAVTGWDV*RPRFFIQWLNH
Trigger: GTGATTGAGCCACTGGATGAAGAAGCGCGGCCTTCACACATCCCAGCCGGTGACTGCAGTGAGTGTGATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486200.1
CDS TCA 72 bp AATTGGTCAAAATGTACCCTGCCCAAGAGGTTGTCCTaGAGTAATGTCTGCTGCAGCACTGGGGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: NWSKCTLPKRLS*SNVCCSTGATS
Trigger: GGAGGTGGCCCCAGTGCTGCAGCAGACATTACTTCAGGACAACCTCTTGGGCAGGGTACATTTTGACCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000463419.1
ENST00000476352.5
ENST00000486950.5
ENST00000496749.1
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 72 bp GAGCAGTCTTTTATCAGAAGACAGTGTGTCAGCTTGTaGCCATTCAGGAGCGGCCCAGACACCCGAGCTACT +
Preference number: 6 (lower is better)
Translates to: EQSFIRRQCVSL*PFRSGPDTRAT
Trigger: AGTAGCTCGGGTGTCTGGGCCGCTCCTGAATGGTCACAAGCTGACACACTGTCTTCTGATAAAAGACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486200.1
ENST00000674061.1
CDS GCA 72 bp AATCCAAGGCCTTCAGGATCTCCTGGCTGTTCTCAATaGCCTCTTCCTGCCAGGTGTCCAGTATTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: NPRPSGSPGCSQ*PLPARCPVFSP
Trigger: TGGAGAGAATACTGGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGCCTTGGATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 72 bp GATCAACTCGTTCCCTTCTGCTCAACTCACAACAAATaGCGGATTTCAGCCTTAAAGCTGGCCAGAGCCGCC +
Preference number: 6 (lower is better)
Translates to: DQLVPFCSTHNK*RISALKLARAA
Trigger: GGCGGCTCTGGCCAGCTTTAAGGCTGAAATCCGGCATTTGTTGTGAGTTGAGCAGAAGGGAACGAGTTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS CAA 72 bp CATCCAGGCAGGAGAAGACCCGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTGTGGTACGTCGTCCAC +
Preference number: 6 (lower is better)
Translates to: HPGRRRPESQWY*SLLMRLWYVVH
Trigger: GTGGACGACGTACCACAACCTCATCAGCAATGACAAGTACCATTGGCTTTCGGGTCTTCTCCTGCCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CAA 90 bp CCATCCCATCATCCAGGCAGGAGAAGACCCGAAAGCCAATGGTACTaGTCATTGCTGATGAGGTTGTGGTACGTCGTCCACTCTCATCGA +
Preference number: 6 (lower is better)
Translates to: PSHHPGRRRPESQWY*SLLMRLWYVVHSHR
Trigger: TCGATGAGAGTGGACGACGTACCACAACCTCATCAGCAATGACAAGTACCATTGGCTTTCGGGTCTTCTCCTGCCTGGATGATGGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000474937.1
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CAA 90 bp CCATGGCAACTGCTGGGCACTGGAAAGCACCCCAGGCTCAGTATCTaGAGGCAAAAACCAAGTGTTCGAGCTGCTTTATCACACTCACTG +
Preference number: 6 (lower is better)
Translates to: PWQLLGTGKHPRLSI*RQKPSVRAALSHSL
Trigger: CAGTGAGTGTGATAAAGCAGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGCCTGGGGTGCTTTCCAGTGCCCAGCAGTTGCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486200.1
CDS TCA 72 bp TGCTCACAGATGGAGACCAGCTTCTTCCGGTTCAGGTaGCCATCACGGGTGATCCCCAAATCTTCACAAACT +
Preference number: 6 (lower is better)
Translates to: CSQMETSFFRFR*PSRVIPKSSQT
Trigger: AGTTTGTGAAGATTTGGGGATCACCCGTGATGGTCACCTGAACCGGAAGAAGCTGGTCTCCATCTGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CCA 72 bp CCTCATCATCTTCCAGGTCACTTAGGACATGCCGCCTaGTCACACCTTCTACTTGCTTCGTTCGGTTTTGCT +
Preference number: 6 (lower is better)
Translates to: PHHLPGHLGHAA*SHLLLASFGFA
Trigger: AGCAAAACCGAACGAAGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAAGTGACCTGGAAGATGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CCA 72 bp TTTCTCAATTTTAGCTGCCACACCTTCAGGATCTCCTaGCTGTTCTCAATGCCCTCTTCCTGCCAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: FLNFSCHTFRIS*LFSMPSSCQVS
Trigger: GGACACCTGGCAGGAAGAGGGCATTGAGAACAGCCAGGAGATCCTGAAGGTGTGGCAGCTAAAATTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474937.1
CDS TCA 72 bp CCTCCAGGCTTTGCAGAGCGCTTTCACACCTCTCAGTaGCTTTCTGACAATCAGACTGAAACTGGGCTTCTA +
Preference number: 6 (lower is better)
Translates to: PPGFAERFHTSQ*LSDNQTETGLL
Trigger: TAGAAGCCCAGTTTCAGTCTGATTGTCAGAAAGTCACTGAGAGGTGTGAAAGCGCTCTGCAAAGCCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS GCA 72 bp TCGAGCATCTCTCCATCCACATTCTGTAAACCATACTaGTCACAGATGGAGACCAGCTTCTTCCGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: SSISPSTFCKPY*SQMETSFFRFR
Trigger: CCTGAACCGGAAGAAGCTGGTCTCCATCTGTGAGCAGTATGGTTTACAGAATGTGGATGGAGAGATGCTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS GCA 72 bp ACCGCTGGACCACGCTTTCCTGAAGCTTCTCAATCTTaGCTTGAAGTCTCAAAACCAGAACATTCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: TAGPRFPEASQS*LEVSKPEHSAP
Trigger: AGGGGCTGAATGTTCTGGTTTTGAGACTTCAAGGCAAGATTGAGAAGCTTCAGGAAAGCGTGGTCCAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS GCA 72 bp GCTCAGTATCTTGAGGCAAAAACCAAGTGTTCGAGCTaGTTTATCACACTCACTGCAGTCACCGGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: AQYLEAKTKCSS*FITLTAVTGWD
Trigger: ATCCCAGCCGGTGACTGCAGTGAGTGTGATAAAGCAGCTCGAACACTTGGTTTTTGCCTCAAGATACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486200.1
CDS TCA 72 bp CTCCTCTCCTATCACCTGGCAACCACTCTGAAGCATTaGGAGAGGAGATGTTGCCTGCTGCATTTCCTTTAT +
Preference number: 6 (lower is better)
Translates to: LLSYHLATTLKH*ERRCCLLHFLY
Trigger: ATAAAGGAAATGCAGCAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGTGATAGGAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 72 bp CCTTGTCCAGATCTGACCGTAGCTTCTCTTTTTCTCTaGCCACCTGATCAACTCGTTCCCTTCTGCTCAACT +
Preference number: 6 (lower is better)
Translates to: PCPDLTVASLFL*PPDQLVPFCST
Trigger: AGTTGAGCAGAAGGGAACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGCTACGGTCAGATCTGGACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS CCA 72 bp ACTCTGCCTTGTGCACGATATTCTTCCAGCTCAGACTaGAGTTCATCTACTTGGTCTTGTAGTACCCTGCAC +
Preference number: 6 (lower is better)
Translates to: TLPCARYSSSSD*SSSTWSCSTLH
Trigger: GTGCAGGGTACTACAAGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGAATATCGTGCACAAGGCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS CCA 72 bp CTGCTGTCTCACAGGTCGCTTTGTGAATGTTCTCCATaGCTAGAAGCTTGGACATCATTTCCTGCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: LLSHRSLCECSP*LEAWTSFPAFP
Trigger: AGGAAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGAGAACATTCACAAAGCGACCTGTGAGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS CCA 72 bp TATTTCCATCAGGTTCGATTTCCAGGTTCTCTAAACTaGCTTCCCATAAGCAGCAGTCACACCGCTGGACCA +
Preference number: 6 (lower is better)
Translates to: YFHQVRFPGSLN*LPISSSHTAGP
Trigger: TGGTCCAGCGGTGTGACTGCTGCTTATGGGAAGCCAGTTTAGAGAACCTGGAAATCGAACCTGATGGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CAA 90 bp GCACTGCCGCTCATATTCATTTCTCATCTGTGTCAGTCTCTCTTCTaGCAGGAAGAACTCAGCACTGCTAGGATCGAGGTCACCAAACTT +
Preference number: 6 (lower is better)
Translates to: ALPLIFISHLCQSLF*QEELSTARIEVTKL
Trigger: AAGTTTGGTGACCTCGATCCTAGCAGTGCTGAGTTCTTCCTGCAAGAAGAGAGACTGACACAGATGAGAAATGAATATGAGCGGCAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS CAA 90 bp CTTCCACCTCCTCCTCTCCTATCACCTGGCAACCACTCTGAAGCATaGAGAGAGGAGATGTTGCCTGCTGCATTTCCTTTATTTTACTCT +
Preference number: 6 (lower is better)
Translates to: LPPPPLLSPGNHSEA*REEMLPAAFPLFYS
Trigger: AGAGTAAAATAAAGGAAATGCAGCAGGCAACATCTCCTCTCTCAATGCTTCAGAGTGGTTGCCAGGTGATAGGAGAGGAGGAGGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS CAA 90 bp GGATTGCATTCTTCAGAACCGAGCCCTGAAAACACATGGGACTCATaGATCCTGCAGCAGGTTCTTTCAATAACACAGTGTGGCATCGTG +
Preference number: 6 (lower is better)
Translates to: GLHSSEPSPENTWDS*ILQQVLSITQCGIV
Trigger: CACGATGCCACACTGTGTTATTGAAAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGAATGCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS TCA 72 bp CGGATTTCAGCCTTAAAGCTGGCCAGAGCCGCCTGGTaGATGCTGTTCTTGGTAACCAAAAGTTCATTTTCA +
Preference number: 6 (lower is better)
Translates to: RISALKLARAAW*MLFLVTKSSFS
Trigger: TGAAAATGAACTTTTGGTTACCAAGAACAGCATTCACCAGGCGGCTCTGGCCAGCTTTAAGGCTGAAATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS TCA 72 bp AGATCTGACCGTAGCTTCTCTTTTTCTCTGACCACCTaGTCAACTCGTTCCAACAAATGCCGGATTTCAGCC +
Preference number: 6 (lower is better)
Translates to: RSDRSFSFSLTT*STRSNKCRISA
Trigger: GGCTGAAATCCGGCATTTGTTGGAACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGCTACGGTCAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS TCA 72 bp GCTCTTTCTCGATCTGCTGTCTCACAGGTCGCTTTGTaGATGTTCTCCATGGCTAGAAGCTTGGACATCATT +
Preference number: 6 (lower is better)
Translates to: ALSRSAVSQVAL*MFSMARSLDII
Trigger: AATGATGTCCAAGCTTCTAGCCATGGAGAACATTCACAAAGCGACCTGTGAGACAGCAGATCGAGAAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 72 bp ACACTCCTAACCCTGGGCACACACTCTTCCAGTGTCTaGTTGAGCTGGAGTATATTTCCATCAGGTTCGATT +
Preference number: 6 (lower is better)
Translates to: TLLTLGTHSSSV*LSWSIFPSGSI
Trigger: AATCGAACCTGATGGAAATATACTCCAGCTCAATCAGACACTGGAAGAGTGTGTGCCCAGGGTTAGGAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS GCA 72 bp TCACTTAGGACATGCCGCCTGGTCACACCTTCTACTTaGTTCGTTCGGTTTTGCTGTAAAAACTGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: SLRTCRLVTPST*FVRFCCKNCSV
Trigger: AACAGAGCAGTTTTTACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGACCAGGCGGCATGTCCTAAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CCA 72 bp CGATATTCTTCCAGCTCAGACTGGAGTTCATCTACTTaGTCTTGTAGTACCCTGCACTGCCGCTCATATTCA +
Preference number: 6 (lower is better)
Translates to: RYSSSSDWSSST*SCSTLHCRSYS
Trigger: TGAATATGAGCGGCAGTGCAGGGTACTACAAGACCAAGTAGATGAACTCCAGTCTGAGCTGGAAGAATATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS CCA 72 bp AGGTCGCTTTGTGAATGTTCTCCATGGCTAGAAGCTTaGACATCATTTCCTGCCTTTCCTGGTCATGTTCCA +
Preference number: 6 (lower is better)
Translates to: RSLCECSPWLEA*TSFPAFPGHVP
Trigger: TGGAACATGACCAGGAAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGAGAACATTCACAAAGCGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS TCA 72 bp AGGTACTGGTTTTCTTGCTTACATTCCTCTATGACATaGTGTACACTCCTAACCCTGGGCACACACTCTTCC +
Preference number: 6 (lower is better)
Translates to: RYWFSCLHSSMT*CTLLTLGTHSS
Trigger: GGAAGAGTGTGTGCCCAGGGTTAGGAGTGTACATCATGTCATAGAGGAATGTAAGCAAGAAAACCAGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS TCA 72 bp AGATCTGACCGTAGCTTCTCTTTTTCTCTGACCACCTaGTCAACTCGTTCCCTTCTGCTCAACTCACAACAA +
Preference number: 6 (lower is better)
Translates to: RSDRSFSFSLTT*STRSLLLNSQQ
Trigger: TTGTTGTGAGTTGAGCAGAAGGGAACGAGTTGATCAGGTGGTCAGAGAAAAAGAGAAGCTACGGTCAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673657.1
CDS GCA 72 bp CAGACTGGAGTTCATCTACTTGGTCTTGTAGTACCCTaGACTGCCGCTCATATTCATTTCTCATCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: QTGVHLLGLVVP*TAAHIHFSSVS
Trigger: TGACACAGATGAGAAATGAATATGAGCGGCAGTGCAGGGTACTACAAGACCAAGTAGATGAACTCCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS GCA 72 bp CGCCTGGTCACACCTTCTACTTGCTTCGTTCGGTTTTaGTGTAAAAACTGCTCTGTTTGTTCCGCAGTATTT +
Preference number: 6 (lower is better)
Translates to: RLVTPSTCFVRF*CKNCSVCSAVF
Trigger: AAATACTGCGGAACAAACAGAGCAGTTTTTACAGCAAAACCGAACGAAGCAAGTAGAAGGTGTGACCAGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CCA 72 bp TCACAAACTTCTTGCAGTTTCTCTTCTATCCAGTCTTaGGGAGGGGAAGATCCACTCTGTGAAGCATTCAAG +
Preference number: 6 (lower is better)
Translates to: SQTSCSFSSIQS*GGEDPLCEAFK
Trigger: CTTGAATGCTTCACAGAGTGGATCTTCCCCTCCCCAAGACTGGATAGAAGAGAAACTGCAAGAAGTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CCA 72 bp GGATTGCATTCTTCAGAACCGAGCCCTGAAAACACATaGGACTCATTGATCCTGCAGCAGGTTCTTTCAATA +
Preference number: 6 (lower is better)
Translates to: GLHSSEPSPENT*DSLILQQVLSI
Trigger: TATTGAAAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGAATGCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS CAA 72 bp CTCATATTCATTTCTCATCTGTGTCAGTCTCTCTTCTaGCAGGAAGAACTCAGCACTGCTAGGATCGAGGTC +
Preference number: 6 (lower is better)
Translates to: LIFISHLCQSLF*QEELSTARIEV
Trigger: GACCTCGATCCTAGCAGTGCTGAGTTCTTCCTGCAAGAAGAGAGACTGACACAGATGAGAAATGAATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000674030.1
CDS CAA 72 bp TCTTCAGAACCGAGCCCTGAAAACACATGGGACTCATaGATCCTGCAGCAGGTTCTTTCAATAACACAGTGT +
Preference number: 6 (lower is better)
Translates to: SSEPSPENTWDS*ILQQVLSITQC
Trigger: ACACTGTGTTATTGAAAGAACCTGCTGCAGGATCAATGAGTCCCATGTGTTTTCAGGGCTCGGTTCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674030.1
CDS GCA 72 bp ATGTTCTCCATGGCTAGAAGCTTGGACATCATTTCCTaGCTTTCCTGGTCATGTTCCATTTCTAGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: MFSMARSLDIIS*LSWSCSISSLS
Trigger: GGAAAGACTAGAAATGGAACATGACCAGGAAAGGCAGGAAATGATGTCCAAGCTTCTAGCCATGGAGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS CCA 72 bp TTTCTCGGCTCACATCTTCATACAACAGCTTATATTTaGGAGAAGCCTCAGGGATTCTCTCAAGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: FLGSHLHTTAYI*EKPQGFSQASS
Trigger: TGAAGATGCTTGAGAGAATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGTATGAAGATGTGAGCCGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CAA 72 bp TTTTCTCGGCTCACATCTTCATACAACAGCTTATATTaGGGAGAAGCCTCAGGGATTCTCTCAAGCATCTTC +
Preference number: 6 (lower is better)
Translates to: FSRLTSSYNSLY*GEASGILSSIF
Trigger: GAAGATGCTTGAGAGAATCCCTGAGGCTTCTCCCAAATATAAGCTGTTGTATGAAGATGTGAGCCGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CCA 72 bp CCTGTAACTTTGTTTTCTCCAGTTCTAACTCTGCTATaGTGGCCTGATGCTGAAAATGTTTGTCTTGAAAGC +
Preference number: 6 (lower is better)
Translates to: PVTLFSPVLTLL*WPDAENVCLES
Trigger: GCTTTCAAGACAAACATTTTCAGCATCAGGCCACCATAGCAGAGTTAGAACTGGAGAAAACAAAGTTACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CAA 72 bp AGTTCATTTTCAAGGGCCAGTGTTAATTCTGTCAAATaGATGTTTCCATCGAGGCTGAAATCCAAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSFSRASVNSVK*MFPSRLKSKAF
Trigger: GAAGGCCTTGGATTTCAGCCTCGATGGAAACATCAATTTGACAGAATTAACACTGGCCCTTGAAAATGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324330.13
ENST00000382041.7
ENST00000382043.8
ENST00000453196.6
ENST00000453401.6
ENST00000476352.5
ENST00000530997.7
ENST00000673657.1
ENST00000674030.1
CDS CCA 72 bp GTAACTTTGTTTTCTCCAGTTCTAACTCTGCTATGGTaGCCTGATGCTGAAAATGTTTGTCTTGAAAGCCTA +
Preference number: 6 (lower is better)
Translates to: VTLFSPVLTLLW*PDAENVCLESL
Trigger: TAGGCTTTCAAGACAAACATTTTCAGCATCAGGCCACCATAGCAGAGTTAGAACTGGAGAAAACAAAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CAA 72 bp AAGTCTGTTTGTTTCTCTTTACTAAATCCAGCTTTCTaGTCAGTAGCTCAGTGGAAACCTAGGACAGTAGGT +
Preference number: 6 (lower is better)
Translates to: KSVCFSLLNPAF*SVAQWKPRTVG
Trigger: ACCTACTGTCCTAGGTTTCCACTGAGCTACTGACAAGAAAGCTGGATTTAGTAAAGAGAAACAAACAGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480476.1
CDS TCA 72 bp CCAAATCATATCCTTCCATGTACAAGGAAACAAGGATaGAAGCAGTTACCATTCAGCTTCACTCTACTCATT +
Preference number: 6 (lower is better)
Translates to: PNHILPCTRKQG*KQLPFSFTLLI
Trigger: AATGAGTAGAGTGAAGCTGAATGGTAACTGCTTTCATCCTTGTTTCCTTGTACATGGAAGGATATGATTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463419.1
CDS CCA 72 bp TCTGGTAGATTACTAAATGGTATCTTACAATACCAATaGGTGCCAACTGGCATCACAAAAGATGGTTTCACT +
Preference number: 6 (lower is better)
Translates to: SGRLLNGILQYQ*VPTGITKDGFT
Trigger: AGTGAAACCATCTTTTGTGATGCCAGTTGGCACCCATTGGTATTGTAAGATACCATTTAGTAATCTACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480476.1
CDS CCA 72 bp TCTTTACTAAATCCAGCTTTCTTGTCAGTAGCTCAGTaGAAACCTAGGACAGTAGGTATATTTACAGGATGT +
Preference number: 6 (lower is better)
Translates to: SLLNPAFLSVAQ*KPRTVGIFTGC
Trigger: ACATCCTGTAAATATACCTACTGTCCTAGGTTTCCACTGAGCTACTGACAAGAAAGCTGGATTTAGTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480476.1
CDS CAA 72 bp GATTCTGTACTCTTGGCCTTTCTTGATGTGTCTGAATaGTTCCATGTAACCAGGCAATTTCATGTGCTTTTA +
Preference number: 6 (lower is better)
Translates to: DSVLLAFLDVSE*FHVTRQFHVLL
Trigger: TAAAAGCACATGAAATTGCCTGGTTACATGGAACAATTCAGACACATCAAGAAAGGCCAAGAGTACAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
CDS CAA 90 bp TTTCTGTTCAACTTCTATCATTCGTTCCTCCATGACAGTTACCAGTaGTTCCTGGTTTCCCTGAAGGGAAGAAAAGTATATTATTCGAAA +
Preference number: 6 (lower is better)
Translates to: FLFNFYHSFLHDSYQ*FLVSLKGRKVYYSK
Trigger: TTTCGAATAATATACTTTTCTTCCCTTCAGGGAAACCAGGAACAACTGGTAACTGTCATGGAGGAACGAATGATAGAAGTTGAACAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555984.1
CDS CAA 72 bp GACTTTCTGACAATCAGACTGAAACTGGGCTTCTATTaGAGAGGTTCTTCTATTACACTCTGTTTCCATTTT +
Preference number: 6 (lower is better)
Translates to: DFLTIRLKLGFY*RGSSITLCFHF
Trigger: AAAATGGAAACAGAGTGTAATAGAAGAACCTCTCAAATAGAAGCCCAGTTTCAGTCTGATTGTCAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382041.7
ENST00000389869.7
ENST00000453196.6
ENST00000476352.5
ENST00000530997.7
ENST00000673819.1
CDS CAA 90 bp AGAACTTTCAAGTCTGTTTGTTTCTCTTTACTAAATCCAGCTTTCTaGTCAGTAGCTCAGTGGAAACCTAGGACAGTAGGTATATTTACA +
Preference number: 6 (lower is better)
Translates to: RTFKSVCFSLLNPAF*SVAQWKPRTVGIFT
Trigger: TGTAAATATACCTACTGTCCTAGGTTTCCACTGAGCTACTGACAAGAAAGCTGGATTTAGTAAAGAGAAACAAACAGACTTGAAAGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480476.1
CDS TCA 72 bp GGTTTCACTGAATTTTGTAGAAATTGTTTTAGCCTATaGTGTTGGACTGTAAAGGACCCTCTTAGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: GFTEFCRNCFSL*CWTVKDPLSCK
Trigger: TTTGCAACTAAGAGGGTCCTTTACAGTCCAACATCATAGGCTAAAACAATTTCTACAAAATTCAGTGAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480476.1