RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NID2 (Homo sapiens)

Ensembl gene IDs: ENSG00000087303

Ensembl transcript IDs: ENST00000216286.10, ENST00000553297.1, ENST00000554284.1, ENST00000555310.1, ENST00000556572.1, ENST00000556686.1, ENST00000557051.1, ENST00000617139.4

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAATGTTCATCTTGGATaGTCAGGAACGTCTAATGGC +
Preference number: 2 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLNVHLG*SGTSNG
Trigger: GCCATTAGACGTTCCTGAGCATCCAAGATGAACATT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
3UTR-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCTTTCCCATCAGTTCTaGATTGGCTTCTCCAACTGT +
Preference number: 2 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDLSHQF*IGFSNC
Trigger: ACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
3UTR-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATAATGTTCATCTTGGATaGTCAGGAACGTCTAATGGC +
Preference number: 2 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDNVHLG*SGTSNG
Trigger: GCCATTAGACGTTCCTGAGCATCCAAGATGAACATT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
3UTR-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCATGTGCTTTAATTTCTaGGCCAGAAGGAATCCATGG +
Preference number: 3 (lower is better)
Translates to: TINNWSFPISSALASPTVMCFNF*ARRNPW
Trigger: CCATGGATTCCTTCTGGCCAAGAAATTAAAGCACAT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
3UTR-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATACAAAATGTTCATCTaGGATGCTCAGGAACGTCTA +
Preference number: 3 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLYKMFI*DAQERL
Trigger: TAGACGTTCCTGAGCATCCAAGATGAACATTTTGTA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
3UTR-3UTR CAA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATATGTGCTTTAATTTCTaGGCCAGAAGGAATCCATGG +
Preference number: 3 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDMCFNF*ARRNPW
Trigger: CCATGGATTCCTTCTGGCCAAGAAATTAAAGCACAT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
3UTR-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTACAAAATGTTCATCTaGGATGCTCAGGAACGTCTA +
Preference number: 3 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIYKMFI*DAQERL
Trigger: TAGACGTTCCTGAGCATCCAAGATGAACATTTTGTA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCGCAGGGGTGGTGCCTaGCTGGGAGCGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKRRGGA*LGAGAL
Trigger: CAGGGCACCCGCTCCCAGCCAGGCACCACCCCTGCG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGAGGGGGAGGAGGGCCTaGGCTGCTGGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKRGRRA*AAGCGM
Trigger: CATCCCACAGCCAGCAGCCCAGGCCCTCCTCCCCCT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGGGGTGGTGCCTGGCTaGGAGCGGGTGCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVGVVPG*ERVPCT
Trigger: GGTGCAGGGCACCCGCTCCCAGCCAGGCACCACCCC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGCGTGGGCCGGACCATaGGTGGAGCGACGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKAWAGP*VERRWV
Trigger: TACCCACCGTCGCTCCACCCATGGTCCGGCCCACGC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGACTCGGCCTCTGCCGTaGCTCGTGTCGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKTRPLP*LVSMSA
Trigger: GGCGGACATCGACACGAGCCACGGCAGAGGCCGAGT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCCCTGCTCGTCGCATTaGGGGATGTGGAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKPCSSH*GMWNRA
Trigger: GGCCCGGTTCCACATCCCCCAATGCGACGAGCAGGG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGGGGTGGTGCCTGGCTaGGAGCGGGTGCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLGVVPG*ERVPCT
Trigger: GGTGCAGGGCACCCGCTCCCAGCCAGGCACCACCCC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACGCAGGGGTGGTGCCTaGCTGGGAGCGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLRRGGA*LGAGAL
Trigger: CAGGGCACCCGCTCCCAGCCAGGCACCACCCCTGCG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCAGCACCTGCGAGGCTaGAGCCGTTCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKQHLRG*SRSQSQ
Trigger: CTGGCTCTGAGAACGGCTTCAGCCTCGCAGGTGCTG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACGTGCGCTTACCCGCTaGACAACGCGTCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLRALTR*TTRPAP
Trigger: CGGGGCGGGACGCGTTGTGCAGCGGGTAAGCGCACG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCGTGCGCTTACCCGCTaGACAACGCGTCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANRALTR*TTRPAP
Trigger: CGGGGCGGGACGCGTTGTGCAGCGGGTAAGCGCACG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACCCGGTCCCCCTCCATaGTCGCTCGGCCGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLPGPPP*SLGRAL
Trigger: AAGCGCACGGCCGAGCGAGCATGGAGGGGGACCGGG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATTGGGAAGAGCTCGTCTaGGTGCAGCGCCGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANWEELV*VQRRGP
Trigger: CGGGCCGCGGCGCTGCACCCAGACGAGCTCTTCCCA...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATGGAGGGGTCACATCTaGCCGGGGCGTGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLWRGHI*PGRGPD
Trigger: GTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGCAGCGCCCCGCGCTTaGCCTCCTCGTAAGCGCCTA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLAAPRA*PPRKRL
Trigger: TAGGCGCTTACGAGGAGGTCAAGCGCGGGGCGCTGC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGTGCTGCCTCCATGGTaGACACACCGGGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVVLPPW*THRACP
Trigger: TGGGCAGGCCCGGTGTGTTCACCATGGAGGCAGCAC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGGCACTGCAGGGGGATaGAGTGGCCCAGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVGTAGG*SGPGHR
Trigger: GCGATGACCTGGGCCACTTCATCCCCCTGCAGTGCC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAAAGAGCTCGTCTGGGTaGAGCGCCGCGGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLKSSSG*SAAARN
Trigger: GTTGCGGGCCGCGGCGCTGCACCCAGACGAGCTCTT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGACAGGACTCGGCCTCTaGCGTGGCTCGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKTGLGL*RGSCRC
Trigger: ACATCGACACGAGCCACGGCAGAGGCCGAGTCCTGT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGCCTGGGCATGGCGCTaGTGTTGTTCACAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKAWAWR*CCSQGV
Trigger: GACACCCTGTGAACAACAGCAGCGCCATGCCCAGGC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGGCAGGAAGTTGCCCTaGTCGTCGCATTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKGRKLP*SSHWGM
Trigger: CATCCCCCAATGCGACGAGCAGGGCAACTTCCTGCC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGTAGGGGCAGGAAGTTaGCCTGCTCGTCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKVGAGS*PARRIG
Trigger: CCCAATGCGACGAGCAGGGCAACTTCCTGCCCCTAC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTGGGAGCGGGTGCCCTaGACCTCTCTGCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKWERVP*TSLPSL
Trigger: CAAAGATGGCAGAGAGGTGCAGGGCACCCGCTCCCA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATACACGCAGGGGTGGTaGCTGGCTGGGAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLYTQGW*LAGSGC
Trigger: GCACCCGCTCCCAGCCAGGCACCACCCCTGCGTGTA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGAAGTGCACGGGTGTATaGCCCACGTGGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKKCTGV*PTWRWP
Trigger: TGGCCACCTCCACGTGGGCCATACACCCGTGCACTT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAGGGGGAGGAGGGCCTaGGCTGCTGGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLRGRRA*AAGCGM
Trigger: CATCCCACAGCCAGCAGCCCAGGCCCTCCTCCCCCT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGAAGGTGCCCACAGATaGAGGGGTCACATCTGGCCG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKEGAHR*RGHIWP
Trigger: CGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCCCCGGAGTGGGGTCTaGATCCTCTTTGACCGGGCC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANPRSGV*ILFDRA
Trigger: GGCCCGGTCAAAGAGGATTCAGACCCCACTCCGGGG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACCCCGGAGTGGGGTCTaGATCCTCTTTGACCGGGCC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLPRSGV*ILFDRA
Trigger: GGCCCGGTCAAAGAGGATTCAGACCCCACTCCGGGG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGTGCTGCCTCCATGGTaGACACACCGGGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLVLPPW*THRACP
Trigger: TGGGCAGGCCCGGTGTGTTCACCATGGAGGCAGCAC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGCAGGCAGGCACAGCTaGACGTGCTGCCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVAGRHS*TCCLHG
Trigger: ACCATGGAGGCAGCACGTTCAGCTGTGCCTGCCTGC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGGTGATGGTCCACAGTaGGGCGGGGTGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANGDGPQ*GGVEPG
Trigger: ACCTGGCTCCACCCCGCCTCACTGTGGACCATCACC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGGTGATGGTCCACAGTaGGGCGGGGTGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLGDGPQ*GGVEPG
Trigger: ACCTGGCTCCACCCCGCCTCACTGTGGACCATCACC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACTGGGTGGGCTCTGGTaGTGGTCCACAGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLLGGLW*WSTVRR
Trigger: CCGCCTCACTGTGGACCATCACCAGAGCCCACCCAG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCTGGGTGGGCTCTGGTaGTGGTCCACAGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANLGGLW*WSTVRR
Trigger: CCGCCTCACTGTGGACCATCACCAGAGCCCACCCAG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGGCACTGCAGGGGGATaGAGTGGCCCAGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLGTAGG*SGPGHR
Trigger: GCGATGACCTGGGCCACTTCATCCCCCTGCAGTGCC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGACCAATCACCGGCTCTaGGAAAGTTCGGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKTNHRL*ESSAVA
Trigger: GGCCACTGCCGAACTTTCTCAGAGCCGGTGATTGGT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGAGGAGGGCCTGGGCTaGTGGCTGTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLEEGLG*WLWDVA
Trigger: AGCCACATCCCACAGCCAGCAGCCCAGGCCCTCCTC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGAGGAGGGCCTGGGCTaGTGGCTGTGGGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLEEGLG*WLWDVA
Trigger: AGCCACATCCCACAGCCAGCAGCCCAGGCCCTCCTC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCGGTCCACGTTCAGCTaGTGGGTGGTGGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVRSTFS*WVVGKD
Trigger: GTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTGGGAAGAGCTCGTCTaGGTGCAGCGCCGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDWEELV*VQRRGP
Trigger: CGGGCCGCGGCGCTGCACCCAGACGAGCTCTTCCCA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGGAAGGACGGGTGTCTaGGGGCGTGCCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLGRTGV*GRACTP
Trigger: AGGTGTGCAGGCACGCCCCCAGACACCCGTCCTTCC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGGAAGGACGGGTGTCTaGGGGCGTGCCTGCACACCT +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANGRTGV*GRACTP
Trigger: AGGTGTGCAGGCACGCCCCCAGACACCCGTCCTTCC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTCAGCTGCTGGGTGGTaGGGAAGGACGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVSAAGW*GRTGVW
Trigger: CCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCCCTGCTCGTCGCATTaGGGGATGTGGAACCGGGCC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANPCSSH*GMWNRA
Trigger: GGCCCGGTTCCACATCCCCCAATGCGACGAGCAGGG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACACAGTGAGGCGGGGTaGAGCCAGGTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLHSEAG*SQVESG
Trigger: CCCAGACTCCACCTGGCTCCACCCCGCCTCACTGTG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATCGGGGGCCTCTGGGTaGGCTCTGGTGATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSGASG*ALVMVH
Trigger: GTGGACCATCACCAGAGCCCACCCAGAGGCCCCCGA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATCCAGCGCTCACAGATaGTCGGGGGCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSSAHR*SGASGW
Trigger: CCACCCAGAGGCCCCCGACCATCTGTGAGCGCTGGA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGTATACACGCAGGGGTaGTGCCTGGCTGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLVYTQG*CLAGSG
Trigger: CCCGCTCCCAGCCAGGCACCACCCCTGCGTGTATAC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTGGGTGGAGCGACGGTaGGTATACACGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVWVERR*VYTQGW
Trigger: CCACCCCTGCGTGTATACCCACCGTCGCTCCACCCA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTGGAGGGGTCACATCTaGCCGGGGCGTGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDWRGHI*PGRGPD
Trigger: GTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGCTGAGGCCCTCGGCTaGGGACCAATCACCGGCTCT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLAEALG*GPITGS
Trigger: AGAGCCGGTGATTGGTCCCCAGCCGAGGGCCTCAGC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCGCCAGCCTCGAACCTaGATCTCCGCGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDRQPRT*ISAGAW
Trigger: CCAGGCGCCCGCGGAGATCCAGGTTCGAGGCTGGCG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACAGCACCTGCGAGGCTaGAGCCGTTCTCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLQHLRG*SRSQSQ
Trigger: CTGGCTCTGAGAACGGCTTCAGCCTCGCAGGTGCTG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGAAACCAGTGCTGCCATaGCACTGTAGGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKKPVLP*HCRGRK
Trigger: CTTCCTGCCCCTACAGTGTCATGGCAGCACTGGTTT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAGCAAGCTAATTGGCTaGGGCCCTCGGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSKLIG*GPRLGT
Trigger: GGTCCCCAGCCGAGGGCCTCAGCCAATTAGCTTGCT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAATGCTCGCTCGGCCGTaGGCTTACCCGCTGCACAAC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLMLARP*AYPLHN
Trigger: GTTGTGCAGCGGGTAAGCGCACGGCCGAGCGAGCAT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATATGCTCGCTCGGCCGTaGGCTTACCCGCTGCACAAC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANMLARP*AYPLHN
Trigger: GTTGTGCAGCGGGTAAGCGCACGGCCGAGCGAGCAT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATAAGAGCTCGTCTGGGTaGAGCGCCGCGGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDKSSSG*SAAARN
Trigger: GTTGCGGGCCGCGGCGCTGCACCCAGACGAGCTCTT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTGTCCAACGGGGAAGTaGTGCCGATATGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKCPTGK*CRYGKP
Trigger: GGGCTTTCCATATCGGCAGCACTTCCCCGTTGGACA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTACACGCAGGGGTGGTaGCTGGCTGGGAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDYTQGW*LAGSGC
Trigger: GCACCCGCTCCCAGCCAGGCACCACCCCTGCGTGTA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACCACGACTCCCCGTGTaGGAAGAGCTCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLPRLPV*EELVWV
Trigger: CACCCAGACGAGCTCTTCCCACACGGGGAGTCGTGG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCCACGACTCCCCGTGTaGGAAGAGCTCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANPRLPV*EELVWV
Trigger: CACCCAGACGAGCTCTTCCCACACGGGGAGTCGTGG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGAAGTGCTGCCGATATaGAAAGCCCACACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKEVLPI*KAHTPG
Trigger: CCCTGGAGTGTGGGCTTTCCATATCGGCAGCACTTC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACTGGGCTGCTGGCTGTaGGATGTGGCTGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLLGCWL*DVADGR
Trigger: ACGGCCATCAGCCACATCCCACAGCCAGCAGCCCAG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCTGGGCTGCTGGCTGTaGGATGTGGCTGATGGCCGT +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANLGCWL*DVADGR
Trigger: ACGGCCATCAGCCACATCCCACAGCCAGCAGCCCAG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGAGGGCCTGGGCTGCTaGCTGTGGGATGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLEGLGC*LWDVAD
Trigger: ATCAGCCACATCCCACAGCCAGCAGCCCAGGCCCTC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATCAGCTGCTGGGTGGTaGGGAAGGACGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSAAGW*GRTGVW
Trigger: CCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGACACCTGTCCCTGGATaGCACCGTGCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKTPVPG*HRAVVS
Trigger: TGACACAACAGCACGGTGCCATCCAGGGACAGGTGT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAATGGTCGGGGGCCTCTaGGTGGGCTCTGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLMVGGL*VGSGDG
Trigger: ACCATCACCAGAGCCCACCCAGAGGCCCCCGACCAT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATGGGTGGAGCGACGGTaGGTATACACGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLWVERR*VYTQGW
Trigger: CCACCCCTGCGTGTATACCCACCGTCGCTCCACCCA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGGGCCGGACCATGGGTaGAGCGACGGTGGGTATACA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLGPDHG*SDGGYT
Trigger: TGTATACCCACCGTCGCTCCACCCATGGTCCGGCCC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGGGCCGGACCATGGGTaGAGCGACGGTGGGTATACA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANGPDHG*SDGGYT
Trigger: TGTATACCCACCGTCGCTCCACCCATGGTCCGGCCC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGCGTGGGCCGGACCATaGGTGGAGCGACGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIAWAGP*VERRWV
Trigger: TACCCACCGTCGCTCCACCCATGGTCCGGCCCACGC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGGGTGTAGTGTGACCTaGAGCAGGGTAACTTCGAAG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKGCSVT*SRVTSK
Trigger: CTTCGAAGTTACCCTGCTTCAGGTCACACTACACCC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGAGTCCCTCAGCAGTTTaGGTGATACGAACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKSPSAV*VIRTVS
Trigger: GGAGACGGTTCGTATCACTCAAACTGCTGAGGGACT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGCAGGAGCACAGGTATaGCTGCCATCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLAGAQV*LPSSQG
Trigger: CCCCTGTGAGGATGGCAGTCATACCTGTGCTCCTGC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGCAGGAGCACAGGTATaGCTGCCATCCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANAGAQV*LPSSQG
Trigger: CCCCTGTGAGGATGGCAGTCATACCTGTGCTCCTGC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTTAGCTGCATCCTTCTaGAGCCTGGTGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKLAASF*SLVPLR
Trigger: CCTCAATGGCACCAGGCTTCAGAAGGATGCAGCTAA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAACAGGACTCGGCCTCTaGCGTGGCTCGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLTGLGL*RGSCRC
Trigger: ACATCGACACGAGCCACGGCAGAGGCCGAGTCCTGT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACAGTGGCATAGTCCGTaGAGAAGGCATGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLQWHSP*RRHAGS
Trigger: GCTCCCGGCATGCCTTCTGCACGGACTATGCCACTG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTGGCCGTGTAGGCTCTaGCATCATTGCCCACGATAT +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKWPCRL*HHCPRY
Trigger: ATATCGTGGGCAATGATGGCAGAGCCTACACGGCCA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGTAGGGGCAGGAAGTTaGCCTGCTCGTCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANVGAGS*PARRIG
Trigger: CCCAATGCGACGAGCAGGGCAACTTCCTGCCCCTAC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGAGCAGAAACCAGTGCTaGCATGACACTGTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKSRNQC*HDTVGA
Trigger: TGCCCCTACAGTGTCATGGCAGCACTGGTTTCTGCT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACTCTTTCCGTGGCACTaGAGGGGGATGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLLFPWH*RGMKWP
Trigger: GGGCCACTTCATCCCCCTGCAGTGCCACGGAAAGAG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTATAGAGCAGGAAGGTaGCCACAGATGGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKYRAGR*PQMEGS
Trigger: TGACCCCTCCATCTGTGGGCACCTTCCTGCTCTATA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTACTCGGCCTCTGCCGTaGCTCGTGTCGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYITRPLP*LVSMSA
Trigger: GGCGGACATCGACACGAGCCACGGCAGAGGCCGAGT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTCTACCTGCTCCCAGGTaGCCAGGAAGGCGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYILPAPR*PGRRGW
Trigger: CCACCCACGCCTTCCTGGCCACCTGGGAGCAGGTAG...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATTCGGGGTACGGTGGTaGGGTTTCCCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLFGVRW*GFPGRS
Trigger: GCTCCTTCCTGGGAAACCCCACCACCGTACCCCGAA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCACTGGCCCTCCATCTaGGTAGGGCTGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANHWPSI*VGLDAS
Trigger: GGAAGCATCCAGCCCTACCCAGATGGAGGGCCAGTG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGGTGTATGGCCCACGTaGAGGTGGCCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVGVWPT*RWPLTF
Trigger: GAAAGTGAGTGGCCACCTCCACGTGGGCCATACACC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTCACAGTGAGGCGGGGTaGAGCCAGGTGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIHSEAG*SQVESG
Trigger: CCCAGACTCCACCTGGCTCCACCCCGCCTCACTGTG...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTCGGGGGCCTCTGGGTaGGCTCTGGTGATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDSGASG*ALVMVH
Trigger: GTGGACCATCACCAGAGCCCACCCAGAGGCCCCCGA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTCCAGCGCTCACAGATaGTCGGGGGCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYISSAHR*SGASGW
Trigger: CCACCCAGAGGCCCCCGACCATCTGTGAGCGCTGGA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGTATACACGCAGGGGTaGTGCCTGGCTGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIVYTQG*CLAGSG
Trigger: CCCGCTCCCAGCCAGGCACCACCCCTGCGTGTATAC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGAAGGTGCCCACAGATaGAGGGGTCACATCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLEGAHR*RGHIWP
Trigger: CGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAGTCCTGAGTGGAGATaGTGCCGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSPEWR*CRWCPR
Trigger: ACGTGGGCACCAACGGCATCATCTCCACTCAGGACT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACAACTGCAGCTGGCCTaGCATTGTCCAACGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLQLQLA*HCPTGK
Trigger: CTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATTTCCCATTCACTCGGTaGGGTGCCCCTTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANFPFTR*GAPSGR
Trigger: TCTGCCTGAAGGGGCACCTCACCGAGTGAATGGGAA...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGCAGGTCCACATCAGTaGAGTGCACGGGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLAGPHQ*SARVYG
Trigger: GCCATACACCCGTGCACTTCACTGATGTGGACCTGC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGCAGGCAGGCACAGCTaGACGTGCTGCCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDAGRHS*TCCLHG
Trigger: ACCATGGAGGCAGCACGTTCAGCTGTGCCTGCCTGC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACCAGACCAGCACGGCTaGTTGTCCGTCCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLPDQHG*LSVQQH
Trigger: ATGTTGCTGGACGGACAATCAGCCGTGCTGGTCTGG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACCAGACCAGCACGGCTaGTTGTCCGTCCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLPDQHG*LSVQQH
Trigger: ATGTTGCTGGACGGACAATCAGCCGTGCTGGTCTGG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGCTGTGGCCATTCAATaGCTCCTCTGGTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLAVAIQ*LLWFTR
Trigger: CCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCTGGGTAGGGCTGGATaGTTCCGTTTTCGGGGTACG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANLGRAG*FRFRGT
Trigger: CGTACCCCGAAAACGGAAGCATCCAGCCCTACCCAG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATCCGTGCAGAAGGCATaGCGGGAGCATTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSVQKA*REHCLW
Trigger: CCACAGACAATGCTCCCGGCATGCCTTCTGCACGGA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTCCACATCAGTGAAGTaGACGGGTGTATGGCCCACG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVSTSVK*TGVWPT
Trigger: CGTGGGCCATACACCCGTGCACTTCACTGATGTGGA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCCCACGATATACGCATaGAGGTCCACATCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKPTIYA*RSTSVK
Trigger: CTTCACTGATGTGGACCTGCATGCGTATATCGTGGG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGATCGTCTCAGGCTCTaGTCCCAGTTCCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLDRLRL*SQFQTS
Trigger: GCTGGTCTGGAACTGGGAGCAGAGCCTGAGACGATC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATTCCAGGGCTGTAGCATaGCTGAAGGAACGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANSRAVA*LKERPR
Trigger: CCTGGGACGTTCCTTCAGCCATGCTACAGCCCTGGA...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGGTGTATGGCCCACGTaGAGGTGGCCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLGVWPT*RWPLTF
Trigger: GAAAGTGAGTGGCCACCTCCACGTGGGCCATACACC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGAGGGCCTGGGCTGCTaGCTGTGGGATGTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDEGLGC*LWDVAD
Trigger: ATCAGCCACATCCCACAGCCAGCAGCCCAGGCCCTC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATATGGTCGGGGGCCTCTaGGTGGGCTCTGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDMVGGL*VGSGDG
Trigger: ACCATCACCAGAGCCCACCCAGAGGCCCCCGACCAT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGTCGCTCTTTCCGTaGCACTGCAGGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVKSLFP*HCRGMK
Trigger: CTTCATCCCCCTGCAGTGCCACGGAAAGAGCGACTT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCAGCTTCACCACGGCTaGGCTTTCGTCGTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDQLHHG*AFVVAF
Trigger: GAAGGCGACGACGAAAGCTCAGCCGTGGTGAAGCTG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCCACGTAGAGGTTGCTaGATCGGGCTTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVPRRGC*IGLRRS
Trigger: ACTTCTACGAAGCCCGATTCAGCAACCTCTACGTGG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCCTCAGCAGTTTGAGTaGTACGAACCGTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVPQQFE*YEPSPL
Trigger: GAGAGGAGACGGTTCGTATCACTCAAACTGCTGAGG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGGCTGTGAAATTTGCTaGGACGTAAGGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLGCEIC*DVRHLA
Trigger: GGCCAGGTGCCTTACGTCTCAGCAAATTTCACAGCC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGGCTGTGAAATTTGCTaGGACGTAAGGCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLGCEIC*DVRHLA
Trigger: GGCCAGGTGCCTTACGTCTCAGCAAATTTCACAGCC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTTGGGGCCACAGCGATaGAAGCCAGTTGCACATTCA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVLGPQR*KPVAHS
Trigger: TGAATGTGCAACTGGCTTTCATCGCTGTGGCCCCAA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAACAGGGTGTCAGGCTTaGGGTGGAGTCAGGTATGCA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLTGCQA*GGVRYA
Trigger: TGCATACCTGACTCCACCTCAAGCCTGACACCCTGT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATACAGGGTGTCAGGCTTaGGGTGGAGTCAGGTATGCA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANTGCQA*GGVRYA
Trigger: TGCATACCTGACTCCACCTCAAGCCTGACACCCTGT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAAAACCAGTGCTGCCATaGCACTGTAGGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLKPVLP*HCRGRK
Trigger: CTTCCTGCCCCTACAGTGTCATGGCAGCACTGGTTT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGAAGCCTGGTGCCATTaGGGGGTAAGTAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVEAWCH*GVSSQS
Trigger: AGATTGGCTACTTACCCCTCAATGGCACCAGGCTTC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACCAACGGGGAAGTGCTaGCGATATGGAAAGCCCACA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLPTGKC*RYGKPT
Trigger: TGTGGGCTTTCCATATCGGCAGCACTTCCCCGTTGG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGAGTATGCCGGTCATCTaGAAACTCATAACCACTCCG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKSMPVI*KLITTP
Trigger: CGGAGTGGTTATGAGTTTGCAGATGACCGGCATACT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGGCAGGAAGTTGCCCTaGTCGTCGCATTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIGRKLP*SSHWGM
Trigger: CATCCCCCAATGCGACGAGCAGGGCAACTTCCTGCC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCTCTTTCCGTGGCACTaGAGGGGGATGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDLFPWH*RGMKWP
Trigger: GGGCCACTTCATCCCCCTGCAGTGCCACGGAAAGAG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTGGGAGCGGGTGCCCTaGACCTCTCTGCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIWERVP*TSLPSL
Trigger: CAAAGATGGCAGAGAGGTGCAGGGCACCCGCTCCCA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCAGCAGGGTCTTAGCTaGATCCTTCTGAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVQQGLS*ILLKPG
Trigger: ACCAGGCTTCAGAAGGATGCAGCTAAGACCCTGCTG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTGGCCGGGAAGTCGGTaGGGAAATCATAGTCCACAT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVWPGSR*GNHSPH
Trigger: ATGTGGACTATGATTTCCCCACCGACTTCCCGGCCA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGTCTCCAACTGCAGCTaGCCTGACATTGTCCAACGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANVSNCS*PDIVQR
Trigger: CCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGAC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAACACCTGTCCCTGGATaGCACCGTGCTGTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLTPVPG*HRAVVS
Trigger: TGACACAACAGCACGGTGCCATCCAGGGACAGGTGT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCATCTACACCTGTCCCTaGATGGCACCGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVIYTCP*MAPCCC
Trigger: ACAACAGCACGGTGCCATCCAGGGACAGGTGTAGAT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATTTCCGTCCATCTCCCTaGTACCCAGATGCGCACTCA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANFRPSP*YPDAHS
Trigger: TGAGTGCGCATCTGGGTACCAGGGAGATGGACGGAA...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTCCCAGGTCATCGCACTaGGGCACGTACTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIPRSSH*GTYWSS
Trigger: GGATGACCAGTACGTGCCCCAGTGCGATGACCTGGG...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCCCAGGTCATCGCACTaGGGCACGTACTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDPRSSH*GTYWSS
Trigger: GGATGACCAGTACGTGCCCCAGTGCGATGACCTGGG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTGCAGGGGGATGAAGTaGCCCAGGTCATCGCACTGG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDCRGMK*PRSSHW
Trigger: CCAGTGCGATGACCTGGGCCACTTCATCCCCCTGCA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTGCAGGGGGATGAAGTaGCCCAGGTCATCGCACTGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYICRGMK*PRSSHW
Trigger: CCAGTGCGATGACCTGGGCCACTTCATCCCCCTGCA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACAAGTTGCCTCGGATTaGATCCACAGCGATGGCACG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLQVASD*IHSDGT
Trigger: CGTGCCATCGCTGTGGATCCAATCCGAGGCAACTTG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCCATCAGTTCTGCATTaGCTTCTCCAACTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKPSVLH*LLQLSR
Trigger: CCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGCAGGTCCACATCAGTaGAGTGCACGGGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIAGPHQ*SARVYG
Trigger: GCCATACACCCGTGCACTTCACTGATGTGGACCTGC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCCTCAGCAGTTTGAGTaGTACGAACCGTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANPQQFE*YEPSPL
Trigger: GAGAGGAGACGGTTCGTATCACTCAAACTGCTGAGG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAGTCCCTCAGCAGTTTaGGTGATACGAACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLSPSAV*VIRTVS
Trigger: GGAGACGGTTCGTATCACTCAAACTGCTGAGGGACT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTTGACCGGGCCAATTTaGTTGGTCACAGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKLTGPI*LVTANL
Trigger: TAGATTTGCTGTGACCAATCAAATTGGCCCGGTCAA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGAAGCCTGGTGCCATTaGGGGGTAAGTAGCCAATCT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLEAWCH*GVSSQS
Trigger: AGATTGGCTACTTACCCCTCAATGGCACCAGGCTTC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATTAGCTGCATCCTTCTaGAGCCTGGTGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLLAASF*SLVPLR
Trigger: CCTCAATGGCACCAGGCTTCAGAAGGATGCAGCTAA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCCCACGATATACGCATaGAGGTCCACATCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVPTIYA*RSTSVK
Trigger: CTTCACTGATGTGGACCTGCATGCGTATATCGTGGG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATATTCATCTACATCAGTaGACTGGTGCCCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANIHLHQ*TGAHRR
Trigger: CCGGCGATGGGCACCAGTGCACTGATGTAGATGAAT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAATTCATCTACATCAGTaGACTGGTGCCCATCGCCGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLIHLHQ*TGAHRR
Trigger: CCGGCGATGGGCACCAGTGCACTGATGTAGATGAAT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATATAGAGCAGGAAGGTaGCCACAGATGGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLYRAGR*PQMEGS
Trigger: TGACCCCTCCATCTGTGGGCACCTTCCTGCTCTATA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACAGCAGGGTCTTAGCTaGATCCTTCTGAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLQQGLS*ILLKPG
Trigger: ACCAGGCTTCAGAAGGATGCAGCTAAGACCCTGCTG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGATCGTCTCAGGCTCTaGTCCCAGTTCCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDDRLRL*SQFQTS
Trigger: GCTGGTCTGGAACTGGGAGCAGAGCCTGAGACGATC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGTCCAGTACATTGTTCTaGGGATGTGGTCTATGGCAA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKSSTLF*GCGLWQ
Trigger: TTGCCATAGACCACATCCGCAGAACAATGTACTGGA...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATGTAGAAGAGGACCTTaGGCTCAGAGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLCRRGP*AQSHPA
Trigger: TGCTGGATGGCTCTGAGCGCAAGGTCCTCTTCTACA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATGTAGAAGAGGACCTTaGGCTCAGAGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLCRRGP*AQSHPA
Trigger: TGCTGGATGGCTCTGAGCGCAAGGTCCTCTTCTACA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGCAGTAGGGGTAGACTaGAGTTATCCCGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLAVGVD*SYPVEV
Trigger: CACCTCTACGGGATAACTGCAGTCTACCCCTACTGC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGGAACTGCAGGCCGTTaGCAGGATAAAGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANGTAGR*QDKERG
Trigger: CCCTCTTTCTTTATCCTGCCAACGGCCTGCAGTTCC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCATTTCCGAAGGCACTaGCCCTCCATCTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDHFRRH*PSIWVG
Trigger: CCCTACCCAGATGGAGGGCCAGTGCCTTCGGAAATG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATAACTTGGATTGGCAGTaGCAGCAGAAGCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANNLDWQ*QQKPVA
Trigger: TGCCACTGGCTTCTGCTGCCACTGCCAATCCAAGTT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGCTCAGGTAGTTCTCTaGGTCAAGTCCCTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLAQVVL*VKSLSS
Trigger: ACTGCTGAGGGACTTGACCCAGAGAACTACCTGAGC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAATCTACACCTGTCCCTaGATGGCACCGTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLIYTCP*MAPCCC
Trigger: ACAACAGCACGGTGCCATCCAGGGACAGGTGTAGAT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAACAGGGGTTGGCAGGTaGGGTGATCAAGATGCAAGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLTGVGR*GDQDAS
Trigger: ACTTGCATCTTGATCACCCCACCTGCCAACCCCTGT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGTGTCAGGCTTGAGGTaGAGTCAGGTATGCACTGAA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVVSGLR*SQVCTE
Trigger: TTCAGTGCATACCTGACTCCACCTCAAGCCTGACAC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTACTGGGCCTGGGCATaGCGCTGCTGTTGTTCACAG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIYWAWA*RCCCSQ
Trigger: CTGTGAACAACAGCAGCGCCATGCCCAGGCCCAGTA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGAGAAAGTTCGGCAGTaGCCACCACATCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANEKVRQ*PPHLVL
Trigger: GAGAACCAGATGTGGTGGCCACTGCCGAACTTTCTC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGAGAGATGTGGGCTGTaGAATTTGCTGAGACGTAAG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVERCGL*NLLRRK
Trigger: CTTACGTCTCAGCAAATTTCACAGCCCACATCTCTC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGGTCTGAATCCTCTTTaGCCGGGCCAATTTGATTGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLGLNPL*PGQFDW
Trigger: CCAATCAAATTGGCCCGGTCAAAGAGGATTCAGACC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAAGCTTCCAGGCAAGTTaGTACATACAGAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLSFQAS*YIQSWG
Trigger: GCCCCAACTCTGTATGTATCAACTTGCCTGGAAGCT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATAGCTTCCAGGCAAGTTaGTACATACAGAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANSFQAS*YIQSWG
Trigger: GCCCCAACTCTGTATGTATCAACTTGCCTGGAAGCT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAGGGCTTATCAGACCTaGATTCACGATCGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLRAYQT*IHDRLR
Trigger: CCTGAGACGATCGTGAATTCAGGTCTGATAAGCCCT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTCCACATCAGTGAAGTaGACGGGTGTATGGCCCACG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDSTSVK*TGVWPT
Trigger: CGTGGGCCATACACCCGTGCACTTCACTGATGTGGA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAAGGCTCTGCCATCATTaGCCACGATATACGCATGCA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLRLCHH*PRYTHA
Trigger: TGCATGCGTATATCGTGGGCAATGATGGCAGAGCCT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCCCTGGATGGCACCGTaGTGTTGTGTCACACATGTG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDPWMAP*CCVTHV
Trigger: CACATGTGTGACACAACAGCACGGTGCCATCCAGGG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGATCAAGATGCAAGTATaGCGGTCATCTGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKIKMQV*RSSANS
Trigger: TGAGTTTGCAGATGACCGGCATACTTGCATCTTGAT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTTTGGTTCCTGCATCTaGCCAGCAGAGCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVFGSCI*PAEQFR
Trigger: TCTAAACTGCTCTGCTGGGCAGATGCAGGAACCAAA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGAAGCCCACCCGAGCTaGAAGCTGAAGCTGGACATT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDEAHPS*KLKLDI
Trigger: AATGTCCAGCTTCAGCTTCCAGCTCGGGTGGGCTTC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTCTGTCTACCTCTGGTaGAGCTGGGCTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDSVYLW*SWASGL
Trigger: GAGACCAGAAGCCCAGCTCCACCAGAGGTAGACAGA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACGGGAGCATTGTCTGTaGTTGTGTTCACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLREHCL*LCSQVS
Trigger: GGAAACCTGTGAACACAACCACAGACAATGCTCCCG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGTAACTTCCATGTCATaGGTAAAGGCAGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANVTSMS*VKAAPA
Trigger: CGCAGGTGCTGCCTTTACCCATGACATGGAAGTTAC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGTAACTTCCATGTCATaGGTAAAGGCAGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLVTSMS*VKAAPA
Trigger: CGCAGGTGCTGCCTTTACCCATGACATGGAAGTTAC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTTCCGTCCATCTCCCTaGTACCCAGATGCGCACTCA +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDFRPSP*YPDAHS
Trigger: TGAGTGCGCATCTGGGTACCAGGGAGATGGACGGAA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTAAGTCGCTCTTTCCGTaGCACTGCAGGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIKSLFP*HCRGMK
Trigger: CTTCATCCCCCTGCAGTGCCACGGAAAGAGCGACTT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCAATTCCCACGATTATaGAGCCATGCAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVQFPRL*SHAETA
Trigger: TGCTGTCTCTGCATGGCTCCATAATCGTGGGAATTG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATGCGGATGTGGTCTATaGCAAGTCCTTCAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLCGCGL*QVLQGL
Trigger: TAAGCCCTGAAGGACTTGCCATAGACCACATCCGCA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATGCGGATGTGGTCTATaGCAAGTCCTTCAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLCGCGL*QVLQGL
Trigger: TAAGCCCTGAAGGACTTGCCATAGACCACATCCGCA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTCCACGTAGAGGTTGCTaGATCGGGCTTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIPRRGC*IGLRRS
Trigger: ACTTCTACGAAGCCCGATTCAGCAACCTCTACGTGG...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGAAATATGGTCCTTCTaGCTTCAGATCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVEIWSF*LQIISL
Trigger: GAGGCTGATGATCTGAAGTCAGAAGGACCATATTTC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGTTCCTTCTTTGGTGTaGGGATCCAAGGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLVPSLV*GSKVED
Trigger: ATCTTCCACCTTGGATCCTCACACCAAAGAAGGAAC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGAGAGATGTGGGCTGTaGAATTTGCTGAGACGTAAG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANERCGL*NLLRRK
Trigger: CTTACGTCTCAGCAAATTTCACAGCCCACATCTCTC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCAGGACCATGTTTGGTTaGTTGCACCAAAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVRTMFG*LHQKSE
Trigger: CTCTGACTTTTGGTGCAATCAACCAAACATGGTCCT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTGCACACCTGGTAAGTaGTGTTCTGGTGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDCTPGK*CSGGCG
Trigger: ACCGCATCCACCAGAACATCACTTACCAGGTGTGCA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTTGACCGGGCCAATTTaGTTGGTCACAGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVLTGPI*LVTANL
Trigger: TAGATTTGCTGTGACCAATCAAATTGGCCCGGTCAA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTTGGGGCCACAGCGATaGAAGCCAGTTGCACATTCA +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDLGPQR*KPVAHS
Trigger: TGAATGTGCAACTGGCTTTCATCGCTGTGGCCCCAA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGGAAAGGTCTCCAACTaGAGCTGGCCTGACATTGTC +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDGKVSN*SWPDIV
Trigger: GACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCAGGAAACATCAATGCTaGTGTGGCCATTCAATGCCT +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVRKHQC*CGHSMP
Trigger: AGGCATTGAATGGCCACAGCAGCATTGATGTTTCCT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTGGCCGTGTAGGCTCTaGCATCATTGCCCACGATAT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDWPCRL*HHCPRY
Trigger: ATATCGTGGGCAATGATGGCAGAGCCTACACGGCCA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCCATGTTTGGTTGATTaGACCAAAAGTCAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKPCLVD*TKSQRV
Trigger: TACTCTCTGACTTTTGGTGCAATCAACCAAACATGG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATAGTATGCCGGTCATCTaGAAACTCATAACCACTCCG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANSMPVI*KLITTP
Trigger: CGGAGTGGTTATGAGTTTGCAGATGACCGGCATACT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTAGCAGAAACCAGTGCTaGCATGACACTGTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYISRNQC*HDTVGA
Trigger: TGCCCCTACAGTGTCATGGCAGCACTGGTTTCTGCT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATTTGGTTCCTGCATCTaGCCAGCAGAGCAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLFGSCI*PAEQFR
Trigger: TCTAAACTGCTCTGCTGGGCAGATGCAGGAACCAAA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGCAGTAGGGGTAGACTaGAGTTATCCCGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDAVGVD*SYPVEV
Trigger: CACCTCTACGGGATAACTGCAGTCTACCCCTACTGC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTCATACTGCGTTTCCCTaGGGAAGTCCTGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIHTAFP*GSPEWR
Trigger: TCTCCACTCAGGACTTCCCCAGGGAAACGCAGTATG...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACATTGTAAGACTCTTTaGGGCGGGTTCCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLHCKTL*GGFQGT
Trigger: AGTTCCTTGGAACCCGCCCCAAAGAGTCTTACAATG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAACATCAATGCTGCTGTaGCCATTCAATGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLTSMLL*PFNASS
Trigger: AGAGGAGGCATTGAATGGCCACAGCAGCATTGATGT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGTATCCACTTTGGATTaGAAGGAAACATCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKVSTLD*KETSML
Trigger: CAGCATTGATGTTTCCTTCCAATCCAAAGTGGATAC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATTCTTCAGGATGAGCTaGGGGAACATCCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLFFRMS*GNIHFR
Trigger: TCGGAAATGGATGTTCCCCCAGCTCATCCTGAAGAA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGCTCAGGTAGTTCTCTaGGTCAAGTCCCTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIAQVVL*VKSLSS
Trigger: ACTGCTGAGGGACTTGACCCAGAGAACTACCTGAGC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACAATTCCCACGATTATaGAGCCATGCAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLQFPRL*SHAETA
Trigger: TGCTGTCTCTGCATGGCTCCATAATCGTGGGAATTG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCATTGTTCTGCGGATGTaGTCTATGGCAAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVIVLRM*SMASPS
Trigger: TGAAGGACTTGCCATAGACCACATCCGCAGAACAAT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTTGGATCCACAGCGATaGCACGGGGATTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDLDPQR*HGDSPD
Trigger: ATCTGGTGAATCCCCGTGCCATCGCTGTGGATCCAA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTTGGATCCACAGCGATaGCACGGGGATTCACCAGAT +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYILDPQR*HGDSPD
Trigger: ATCTGGTGAATCCCCGTGCCATCGCTGTGGATCCAA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCCATCAGTTCTGCATTaGCTTCTCCAACTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANPSVLH*LLQLSR
Trigger: CCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAAGGACCATGTTTGGTTaGTTGCACCAAAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLRTMFG*LHQKSE
Trigger: CTCTGACTTTTGGTGCAATCAACCAAACATGGTCCT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGGTCTGAATCCTCTTTaGCCGGGCCAATTTGATTGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIGLNPL*PGQFDW
Trigger: CCAATCAAATTGGCCCGGTCAAAGAGGATTCAGACC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTAGGGCTTATCAGACCTaGATTCACGATCGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIRAYQT*IHDRLR
Trigger: CCTGAGACGATCGTGAATTCAGGTCTGATAAGCCCT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATTACTTGAGGTTGTTTTaGATGACACGCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANYLRLF*MTRRPV
Trigger: AACTGGACGGCGTGTCATTCAAAACAACCTCAAGTA...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGACTATGTTTATTTACTaGTACAACACCATCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKTMFIY*YNTIPP
Trigger: AGGAGGGATGGTGTTGTATCAGTAAATAAACATAGT...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAATCAGACCCATCAGATaGCAAAACTGCCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLIRPIR*QNCLES
Trigger: ACTTTCCAGGCAGTTTTGGCATCTGATGGGTCTGAT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATAGGCTCTGCCATCATTaGCCACGATATACGCATGCA +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDRLCHH*PRYTHA
Trigger: TGCATGCGTATATCGTGGGCAATGATGGCAGAGCCT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAATTGTAGCAGGTAGCTaGAGGGTGACATCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLIVAGS*RVTSVF
Trigger: GAAAACAGATGTCACCCTGCAGCTACCTGCTACAAT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACTTTCCCATCAGTTCTaGATTGGCTTCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLLSHQF*IGFSNC
Trigger: ACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGATGCCAAAACTGCCTaGAAAGTGTTCAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIDAKTA*KVFSSP
Trigger: GGGAGAGCTGAACACTTTCCAGGCAGTTTTGGCATC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATGTGAGGATCCAAGGTaGAAGATTCCTCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLCEDPR*KIPLKA
Trigger: AGCCTTTAGAGGAATCTTCCACCTTGGATCCTCACA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCATTTCCATAAAACTTaGATTGGCAGTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TINNWSFPISSALASPTVHFHKT*IGSGSR
Trigger: TCTGCTGCCACTGCCAATCCAAGTTTTATGGAAATG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATAATGTTCATCTTGGATaGTCAGGAACGTCTAATGGC +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANNVHLG*SGTSNG
Trigger: GCCATTAGACGTTCCTGAGCATCCAAGATGAACATT...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTATTCAATGCCTCCTCTaGTTCACCCGGAAGGTATTC +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIIQCLL*FTRKVF
Trigger: GAATACCTTCCGGGTGAACCAGAGGAGGCATTGAAT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGAGATGTTCCTTCTTTaGTGTGAGGATCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDEMFLL*CEDPRW
Trigger: CCACCTTGGATCCTCACACCAAAGAAGGAACATCTC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAAGTGGCCACCACATCTaGTTCTCGTTAACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLSGHHI*FSLTFL
Trigger: TAGAAAAGTTAACGAGAACCAGATGTGGTGGCCACT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS-3UTR TCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGTGACATCTGTTTTCTaGGCATTCATCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLVTSVF*AFIYIS
Trigger: ACTGATGTAGATGAATGCTCAGAAAACAGATGTCAC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTACTTGAGGTTGTTTTaGATGACACGCCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIYLRLF*MTRRPV
Trigger: AACTGGACGGCGTGTCATTCAAAACAACCTCAAGTA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATCCATGTTTGGTTGATTaGACCAAAAGTCAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANPCLVD*TKSQRV
Trigger: TACTCTCTGACTTTTGGTGCAATCAACCAAACATGG...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTCCAGTACATTGTTCTaGGGATGTGGTCTATGGCAA +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDSSTLF*GCGLWQ
Trigger: TTGCCATAGACCACATCCGCAGAACAATGTACTGGA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTATTGTTCTGCGGATGTaGTCTATGGCAAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIIVLRM*SMASPS
Trigger: TGAAGGACTTGCCATAGACCACATCCGCAGAACAAT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTACAAAGGTTAAGCCATTaGGCAATCCAATGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLQRLSH*AIQCLY
Trigger: ATACAGACATTGGATTGCCCAATGGCTTAACCTTTG...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGTGAGATCGTTGTTCTaGGAGATACTCATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: FLHYKMFILDAQERLMANVRSLF*EILISK
Trigger: TTTACTGATGAGTATCTCCCAGAACAACGATCTCAC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGTGGTAGAAGTGATCTaGATAGCTTACGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIVVEVI*IAYDAE
Trigger: TTCAGCATCGTAAGCTATGCAGATCACTTCTACCAC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR GCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGTGGTAGAAGTGATCTaGATAGCTTACGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDVVEVI*IAYDAE
Trigger: TTCAGCATCGTAAGCTATGCAGATCACTTCTACCAC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGCTTTGTATCCACTTTaGATTGGAAGGAAACATCAA +
Preference number: 4 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLALYPL*IGRKHQ
Trigger: TTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR TCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGTGACATCTGTTTTCTaGGCATTCATCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDVTSVF*AFIYIS
Trigger: ACTGATGTAGATGAATGCTCAGAAAACAGATGTCAC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTCAAAGGTTAAGCCATTaGGCAATCCAATGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIQRLSH*AIQCLY
Trigger: ATACAGACATTGGATTGCCCAATGGCTTAACCTTTG...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CCA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGTGAGATCGTTGTTCTaGGAGATACTCATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDVRSLF*EILISK
Trigger: TTTACTGATGAGTATCTCCCAGAACAACGATCTCAC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR TCA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTACTATGTTTATTTACTaGTACAACACCATCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYITMFIY*YNTIPP
Trigger: AGGAGGGATGGTGTTGTATCAGTAAATAAACATAGT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 90 bp GCCCCGGCCTCCAGCCCACTCTCCGCGCCGCGCCAGCCTCGAACCTaGATCTCCGCGGGCGCCTGGGCGGGGCGGGACTCCAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: APASSPLSAPRQPRT*ISAGAWAGRDSRPT
Trigger: GGTGGGCCTGGAGTCCCGCCCCGCCCAGGCGCCCGCGGAGATCCAGGTTCGAGGCTGGCGCGGCGCGGAGAGTGGGCTGGAGGCCGGGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS GCA 90 bp GTAACGACGACAGCACCGGCCGCCCGGCCACCCGGTCCCCCTCCATaGTCGCTCGGCCGTGCGCTTACCCGCTGCACAACGCGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: VTTTAPAARPPGPPP*SLGRALTRCTTRPA
Trigger: GGCGGGACGCGTTGTGCAGCGGGTAAGCGCACGGCCGAGCGAGCATGGAGGGGGACCGGGTGGCCGGGCGGCCGGTGCTGTCGTCGTTAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 90 bp GCAGGAAGGTGCCCACAGATGGAGGGGTCACATCTGGCCGGGGCGTaGGCCGGACCATGGGTGGAGCGACGGTGGGTATACACGCAGGGG +
Preference number: 5 (lower is better)
Translates to: AGRCPQMEGSHLAGA*AGPWVERRWVYTQG
Trigger: CCCCTGCGTGTATACCCACCGTCGCTCCACCCATGGTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 90 bp GGCGCCTGGGCGGGGCGGGACTCCAGGCCCACCCAGCAAGCTAATTaGCTGAGGCCCTCGGCTGGGGACCAATCACCGGCTCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: GAWAGRDSRPTQQAN*LRPSAGDQSPALRK
Trigger: CTTTCTCAGAGCCGGTGATTGGTCCCCAGCCGAGGGCCTCAGCCAATTAGCTTGCTGGGTGGGCCTGGAGTCCCGCCCCGCCCAGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS TCA 90 bp CTGCCTGGAAAGTGTTCAGCTCTCCCGAGGGCAGCGCCCCGCGCTTaGCCTCCTCGTAAGCGCCTACCTGCTCCCAGGTGGCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LPGKCSALPRAAPRA*PPRKRLPAPRWPGR
Trigger: CCTTCCTGGCCACCTGGGAGCAGGTAGGCGCTTACGAGGAGGTCAAGCGCGGGGCGCTGCCCTCGGGAGAGCTGAACACTTTCCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS TCA 90 bp TGCACTGGTGCCCATCGCCGGCATAACCAGGCAGGCAGGCACAGCTaGACGTGCTGCCTCCATGGTGAACACACCGGGCCTGCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CTGAHRRHNQAGRHS*TCCLHGEHTGPAQQ
Trigger: CTGCTGGGCAGGCCCGGTGTGTTCACCATGGAGGCAGCACGTTCAGCTGTGCCTGCCTGCCTGGTTATGCCGGCGATGGGCACCAGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 90 bp GCCAATCTGCTGGCCCTGAGTATAGAGCAGGAAGGTGCCCACAGATaGAGGGGTCACATCTGGCCGGGGCGTGGGCCGGACCATGGGTGG +
Preference number: 5 (lower is better)
Translates to: ANLLALSIEQEGAHR*RGHIWPGRGPDHGW
Trigger: CCACCCATGGTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTCCTGCTCTATACTCAGGGCCAGCAGATTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS GCA 90 bp ACGCAGGGGTGGTGCCTGGCTGGGAGCGGGTGCCCTGCACCTCTCTaGCATCTTTGTCCACACACCAGCAGAAGTCGCTCTTTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: TQGWCLAGSGCPAPL*HLCPHTSRSRSFRG
Trigger: GCCACGGAAAGAGCGACTTCTGCTGGTGTGTGGACAAAGATGGCAGAGAGGTGCAGGGCACCCGCTCCCAGCCAGGCACCACCCCTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 90 bp CTGAGTATAGAGCAGGAAGGTGCCCACAGATGGAGGGGTCACATCTaGCCGGGGCGTGGGCCGGACCATGGGTGGAGCGACGGTGGGTAT +
Preference number: 5 (lower is better)
Translates to: LSIEQEGAHRWRGHI*PGRGPDHGWSDGGY
Trigger: ATACCCACCGTCGCTCCACCCATGGTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTCCTGCTCTATACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS GCA 90 bp CGACGGTGGGTATACACGCAGGGGTGGTGCCTGGCTGGGAGCGGGTaGCCTGCACCTCTCTGCCATCTTTGTCCACACACCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RRWVYTQGWCLAGSG*PAPLCHLCPHTSRS
Trigger: ACTTCTGCTGGTGTGTGGACAAAGATGGCAGAGAGGTGCAGGGCACCCGCTCCCAGCCAGGCACCACCCCTGCGTGTATACCCACCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 90 bp TGCCACCGTAGTGCTCCAGCAGGTTTTCCCTCCAGCGCTCACAGATaGTCGGGGGCCTCTGGGTGGGCTCTGGTGATGGTCCACAGTGAG +
Preference number: 5 (lower is better)
Translates to: CHRSAPAGFPSSAHR*SGASGWALVMVHSE
Trigger: CTCACTGTGGACCATCACCAGAGCCCACCCAGAGGCCCCCGACCATCTGTGAGCGCTGGAGGGAAAACCTGCTGGAGCACTACGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp CGTCATTATACAAGGCAAAGACCCGGTCCACGTTCAGCTGCTGGGTaGTGGGGAAGGACGGGTGTCTGGGGGCGTGCCTGCACACCTGGT +
Preference number: 5 (lower is better)
Translates to: RHYTRQRPGPRSAAG*WGRTGVWGRACTPG
Trigger: ACCAGGTGTGCAGGCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGTATAATGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp CATTATACAAGGCAAAGACCCGGTCCACGTTCAGCTGCTGGGTGGTaGGGAAGGACGGGTGTCTGGGGGCGTGCCTGCACACCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: HYTRQRPGPRSAAGW*GRTGVWGRACTPGK
Trigger: CTTACCAGGTGTGCAGGCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGTATAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp TCTTCGTCATTATACAAGGCAAAGACCCGGTCCACGTTCAGCTGCTaGGTGGTGGGGAAGGACGGGTGTCTGGGGGCGTGCCTGCACACC +
Preference number: 5 (lower is better)
Translates to: SSSLYKAKTRSTFSC*VVGKDGCLGACLHT
Trigger: GGTGTGCAGGCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGTATAATGACGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS GCA 90 bp CTTTCTTCGTCATTATACAAGGCAAAGACCCGGTCCACGTTCAGCTaGTGGGTGGTGGGGAAGGACGGGTGTCTGGGGGCGTGCCTGCAC +
Preference number: 5 (lower is better)
Translates to: LSSSLYKAKTRSTFS*WVVGKDGCLGACLH
Trigger: GTGCAGGCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGTATAATGACGAAGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS GCA 90 bp ACGTCCCAGGGGAACAGAAGAGTGGGCAGCGGAAAGGTCTCCAACTaGAGCTGGCCTGACATTGTCCAACGGGGAAGTGCTGCCGATATG +
Preference number: 5 (lower is better)
Translates to: TSQGNRRVGSGKVSN*SWPDIVQRGSAADM
Trigger: CATATCGGCAGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCCGCTGCCCACTCTTCTGTTCCCCTGGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp CAGGGGAACAGAAGAGTGGGCAGCGGAAAGGTCTCCAACTGCAGCTaGCCTGACATTGTCCAACGGGGAAGTGCTGCCGATATGGAAAGC +
Preference number: 5 (lower is better)
Translates to: QGNRRVGSGKVSNCS*PDIVQRGSAADMES
Trigger: GCTTTCCATATCGGCAGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCCGCTGCCCACTCTTCTGTTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS TCA 90 bp CTCTGCCATCATTGCCCACGATATACGCATGCAGGTCCACATCAGTaGAGTGCACGGGTGTATGGCCCACGTGGAGGTGGCCACTCACTT +
Preference number: 5 (lower is better)
Translates to: LCHHCPRYTHAGPHQ*SARVYGPRGGGHSL
Trigger: AAGTGAGTGGCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGACCTGCATGCGTATATCGTGGGCAATGATGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 90 bp CCATCATTGCCCACGATATACGCATGCAGGTCCACATCAGTGAAGTaGACGGGTGTATGGCCCACGTGGAGGTGGCCACTCACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PSLPTIYACRSTSVK*TGVWPTWRWPLTFP
Trigger: TGGGAAAGTGAGTGGCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGACCTGCATGCGTATATCGTGGGCAATGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 90 bp CAGCGATGGCACGGGGATTCACCAGATCTGTGTAGAAGAGGACCTTaGGCTCAGAGCCATCCAGCAGGGCGCTCTCTATCTTATCCAGGA +
Preference number: 5 (lower is better)
Translates to: QRWHGDSPDLCRRGP*AQSHPAGRSLSYPG
Trigger: TCCTGGATAAGATAGAGAGCGCCCTGCTGGATGGCTCTGAGCGCAAGGTCCTCTTCTACACAGATCTGGTGAATCCCCGTGCCATCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp GGTGGAGCTGGGCTTCTGGTCTCTCTCTCATCCCAGGGCTCAACTTaGCCTTTTAAATCTGGGCCCCCTACCTCTCCCAGAGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: GGAGLLVSLSSQGST*PFKSGPPTSPRDVP
Trigger: AGGAACATCTCTGGGAGAGGTAGGGGGCCCAGATTTAAAAGGCCAAGTTGAGCCCTGGGATGAGAGAGAGACCAGAAGCCCAGCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp AGCCCACCCGAGCTGGAAGCTGAAGCTGGACATTGTAAGACTCTTTaGGGCGGGTTCCAAGGAACTGCAGGCCGTTGGCAGGATAAAGAA +
Preference number: 5 (lower is better)
Translates to: SPPELEAEAGHCKTL*GGFQGTAGRWQDKE
Trigger: TTCTTTATCCTGCCAACGGCCTGCAGTTCCTTGGAACCCGCCCCAAAGAGTCTTACAATGTCCAGCTTCAGCTTCCAGCTCGGGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp ACGATATACGCATGCAGGTCCACATCAGTGAAGTGCACGGGTGTATaGCCCACGTGGAGGTGGCCACTCACTTTCCCATTCACTCGGTAC +
Preference number: 5 (lower is better)
Translates to: TIYACRSTSVKCTGV*PTWRWPLTFPFTRY
Trigger: GTACCGAGTGAATGGGAAAGTGAGTGGCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGACCTGCATGCGTATATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS GCA 90 bp GTTGGCAGGATAAAGAAAGAGGGCGTAGCTATCAGACCCATCAGATaGCAAAACTGCCTGGAAAGTGTTCAGCTCTCCCGAGGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: VGRIKKEGVAIRPIR*QNCLESVQLSRGQR
Trigger: GCGCTGCCCTCGGGAGAGCTGAACACTTTCCAGGCAGTTTTGGCATCTGATGGGTCTGATAGCTACGCCCTCTTTCTTTATCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 90 bp AAAACTTGGATTGGCAGTGGCAGCAGAAGCCAGTGGCATAGTCCGTaGAGAAGGCATGCCGGGAGCATTGTCTGTGGTTGTGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: KTWIGSGSRSQWHSP*RRHAGSIVCGCVHR
Trigger: CCTGTGAACACAACCACAGACAATGCTCCCGGCATGCCTTCTGCACGGACTATGCCACTGGCTTCTGCTGCCACTGCCAATCCAAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 90 bp TGCGCACTCACAGGTGTAATCTACACCTGTCCCTGGATGGCACCGTaGTGTTGTGTCACACATGTGGCTCCCATCATAGCAAGGATTCCC +
Preference number: 5 (lower is better)
Translates to: CALTGVIYTCPWMAP*CCVTHVAPIIARIP
Trigger: GGGAATCCTTGCTATGATGGGAGCCACATGTGTGACACAACAGCACGGTGCCATCCAGGGACAGGTGTAGATTACACCTGTGAGTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp CTGGTACCCAGATGCGCACTCACAGGTGTAATCTACACCTGTCCCTaGATGGCACCGTGCTGTTGTGTCACACATGTGGCTCCCATCATA +
Preference number: 5 (lower is better)
Translates to: LVPRCALTGVIYTCP*MAPCCCVTHVAPII
Trigger: TATGATGGGAGCCACATGTGTGACACAACAGCACGGTGCCATCCAGGGACAGGTGTAGATTACACCTGTGAGTGCGCATCTGGGTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp TCCAGTCTGTCCAGTACAAGTTGCCTCGGATTGGATCCACAGCGATaGCACGGGGATTCACCAGATCTGTGTAGAAGAGGACCTTGCGCT +
Preference number: 5 (lower is better)
Translates to: SSLSSTSCLGLDPQR*HGDSPDLCRRGPCA
Trigger: AGCGCAAGGTCCTCTTCTACACAGATCTGGTGAATCCCCGTGCCATCGCTGTGGATCCAATCCGAGGCAACTTGTACTGGACAGACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp TCCCATTTCCATAAAACTTGGATTGGCAGTGGCAGCAGAAGCCAGTaGCATAGTCCGTGCAGAAGGCATGCCGGGAGCATTGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SHFHKTWIGSGSRSQ*HSPCRRHAGSIVCG
Trigger: ACCACAGACAATGCTCCCGGCATGCCTTCTGCACGGACTATGCCACTGGCTTCTGCTGCCACTGCCAATCCAAGTTTTATGGAAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp CATTGTAAGACTCTTTGGGGCGGGTTCCAAGGAACTGCAGGCCGTTaGCAGGATAAAGAAAGAGGGCGTAGCTATCAGACCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: HCKTLWGGFQGTAGR*QDKERGRSYQTHQM
Trigger: CATCTGATGGGTCTGATAGCTACGCCCTCTTTCTTTATCCTGCCAACGGCCTGCAGTTCCTTGGAACCCGCCCCAAAGAGTCTTACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 90 bp CGCTCTCTATCTTATCCAGGACACTGTCCGTCCAGTACATTGTTCTaGGGATGTGGTCTATGGCAAGTCCTTCAGGGCTTATCAGACCTG +
Preference number: 5 (lower is better)
Translates to: RSLSYPGHCPSSTLF*GCGLWQVLQGLSDL
Trigger: CAGGTCTGATAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACAGTGTCCTGGATAAGATAGAGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 90 bp AGGCACCTGGCCTTGAATGTTGGTCTTAATGCTCAGGTAGTTCTCTaGGTCAAGTCCCTCAGCAGTTTGAGTGATACGAACCGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RHLALNVGLNAQVVL*VKSLSSLSDTNRLL
Trigger: GAGGAGACGGTTCGTATCACTCAAACTGCTGAGGGACTTGACCCAGAGAACTACCTGAGCATTAAGACCAACATTCAAGGCCAGGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS CCA 90 bp CCAGGACACTGTCCGTCCAGTACATTGTTCTGCGGATGTGGTCTATaGCAAGTCCTTCAGGGCTTATCAGACCTGAATTCACGATCGTCT +
Preference number: 5 (lower is better)
Translates to: PGHCPSSTLFCGCGL*QVLQGLSDLNSRSS
Trigger: AGACGATCGTGAATTCAGGTCTGATAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACAGTGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS-3UTR CAA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCCATCCTCACAGGGGTaGGCAGGTGGGGTGATCAAG +
Preference number: 5 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKPSSQG*AGGVIK
Trigger: CTTGATCACCCCACCTGCCAACCCCTGTGAGGATGG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGCCCTGCTCGTCGCATaGGGGGATGTGGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: FLHYKMFILDAQERLMANALLVA*GDVEPG
Trigger: GCCCGGTTCCACATCCCCCAATGCGACGAGCAGGGC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGCCCTGCTCGTCGCATaGGGGGATGTGGAACCGGGC +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLALLVA*GDVEPG
Trigger: GCCCGGTTCCACATCCCCCAATGCGACGAGCAGGGC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS TCA 90 bp GTGGTACAGCTCCTTGTAGGGAGAGATGTGGGCTGTGAAATTTGCTaGGACGTAAGGCACCTGGCCTTGAATGTTGGTCTTAATGCTCAG +
Preference number: 5 (lower is better)
Translates to: VVQLLVGRDVGCEIC*DVRHLALNVGLNAQ
Trigger: CTGAGCATTAAGACCAACATTCAAGGCCAGGTGCCTTACGTCTCAGCAAATTTCACAGCCCACATCTCTCCCTACAAGGAGCTGTACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS-3UTR CAA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGATGGCACCGTGCTGTaGTGTCACACATGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKDGTVL*CHTCGS
Trigger: GGAGCCACATGTGTGACACAACAGCACGGTGCCATC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS TCA 90 bp AAATCTGGGCCCCCTACCTCTCCCAGAGATGTTCCTTCTTTGGTGTaGGGATCCAAGGTGGAAGATTCCTCTAAAGGCTTTGTATCCACT +
Preference number: 5 (lower is better)
Translates to: KSGPPTSPRDVPSLV*GSKVEDSSKGFVST
Trigger: AGTGGATACAAAGCCTTTAGAGGAATCTTCCACCTTGGATCCTCACACCAAAGAAGGAACATCTCTGGGAGAGGTAGGGGGCCCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 90 bp CACTTTGGATTGGAAGGAAACATCAATGCTGCTGTGGCCATTCAATaGCTCCTCTGGTTCACCCGGAAGGTATTCAGCTTCCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: HFGLEGNINAAVAIQ*LLWFTRKVFSFLLI
Trigger: AATGAGGAGGAAGCTGAATACCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp GGCTTTGTATCCACTTTGGATTGGAAGGAAACATCAATGCTGCTGTaGCCATTCAATGCCTCCTCTGGTTCACCCGGAAGGTATTCAGCT +
Preference number: 5 (lower is better)
Translates to: GFVSTLDWKETSMLL*PFNASSGSPGRYSA
Trigger: AGCTGAATACCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp ATCTTATCCAGGACACTGTCCGTCCAGTACATTGTTCTGCGGATGTaGTCTATGGCAAGTCCTTCAGGGCTTATCAGACCTGAATTCACG +
Preference number: 5 (lower is better)
Translates to: ILSRTLSVQYIVLRM*SMASPSGLIRPEFT
Trigger: CGTGAATTCAGGTCTGATAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACAGTGTCCTGGATAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCCATCCTCACAGGGGTaGGCAGGTGGGGTGATCAAG +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVPSSQG*AGGVIK
Trigger: CTTGATCACCCCACCTGCCAACCCCTGTGAGGATGG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 90 bp TTGGAAGGAAACATCAATGCTGCTGTGGCCATTCAATGCCTCCTCTaGTTCACCCGGAAGGTATTCAGCTTCCTCCTCATTCACATCATA +
Preference number: 5 (lower is better)
Translates to: LEGNINAAVAIQCLL*FTRKVFSFLLIHII
Trigger: TATGATGTGAATGAGGAGGAAGCTGAATACCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCCACAGGGTGTCAGGCTaGAGGTGGAGTCAGGTATGC +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVHRVSG*RWSQVC
Trigger: GCATACCTGACTCCACCTCAAGCCTGACACCCTGTG...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGGCATGGCGCTGCTGTaGTTCACAGGGTGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLGMALL*FTGCQA
Trigger: AGCCTGACACCCTGTGAACAACAGCAGCGCCATGCC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGGCATGGCGCTGCTGTaGTTCACAGGGTGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: FLHYKMFILDAQERLMANGMALL*FTGCQA
Trigger: AGCCTGACACCCTGTGAACAACAGCAGCGCCATGCC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATGTAGGGGCAGGAAGTaGCCCTGCTCGTCGCATTGG +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLCRGRK*PCSSHW
Trigger: CCAATGCGACGAGCAGGGCAACTTCCTGCCCCTACA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTATGTAGGGGCAGGAAGTaGCCCTGCTCGTCGCATTGG +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLCRGRK*PCSSHW
Trigger: CCAATGCGACGAGCAGGGCAACTTCCTGCCCCTACA...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 90 bp CTAAAGGCTTTGTATCCACTTTGGATTGGAAGGAAACATCAATGCTaGTGTGGCCATTCAATGCCTCCTCTGGTTCACCCGGAAGGTATT +
Preference number: 5 (lower is better)
Translates to: LKALYPLWIGRKHQC*CGHSMPPLVHPEGI
Trigger: AATACCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 90 bp GTAAGTGATGTTCTGGTGGATGCGGTAGGACCATGTTTGGTTGATTaGACCAAAAGTCAGAGAGTAGTCTCTGGAACTTGTAGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: VSDVLVDAVGPCLVD*TKSQRVVSGTCRGH
Trigger: GTGACCTCTACAAGTTCCAGAGACTACTCTCTGACTTTTGGTGCAATCAACCAAACATGGTCCTACCGCATCCACCAGAACATCACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS CCA 90 bp CTTTTAAATCTGGGCCCCCTACCTCTCCCAGAGATGTTCCTTCTTTaGTGTGAGGATCCAAGGTGGAAGATTCCTCTAAAGGCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: LLNLGPLPLPEMFLL*CEDPRWKIPLKALY
Trigger: ATACAAAGCCTTTAGAGGAATCTTCCACCTTGGATCCTCACACCAAAGAAGGAACATCTCTGGGAGAGGTAGGGGGCCCAGATTTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGATGGCACCGTGCTGTaGTGTCACACATGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLDGTVL*CHTCGS
Trigger: GGAGCCACATGTGTGACACAACAGCACGGTGCCATC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCACAAGTTGCCTCGGATaGGATCCACAGCGATGGCAC +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVTSCLG*DPQRWH
Trigger: GTGCCATCGCTGTGGATCCAATCCGAGGCAACTTGT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGCCCATCAGTTCTGCATaGGCTTCTCCAACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKPISSA*ASPTVK
Trigger: CTTGACAGTTGGAGAAGCCAATGCAGAACTGATGGG...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 90 bp TCCAAGGTGGAAGATTCCTCTAAAGGCTTTGTATCCACTTTGGATTaGAAGGAAACATCAATGCTGCTGTGGCCATTCAATGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SKVEDSSKGFVSTLD*KETSMLLWPFNASS
Trigger: AGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCCTTTAGAGGAATCTTCCACCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 90 bp GAGGATCCAAGGTGGAAGATTCCTCTAAAGGCTTTGTATCCACTTTaGATTGGAAGGAAACATCAATGCTGCTGTGGCCATTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: EDPRWKIPLKALYPL*IGRKHQCCCGHSMP
Trigger: AGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCCTTTAGAGGAATCTTCCACCTTGGATCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGCAGCTGGCCTGACATaGTCCAACGGGGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIAAGLT*SNGEVL
Trigger: CAGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAGGCATGCCGGGAGCATaGTCTGTGGTTGTGTTCACA +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLGMPGA*SVVVFT
Trigger: TGTGAACACAACCACAGACAATGCTCCCGGCATGCC...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAACAAGTTGCCTCGGATaGGATCCACAGCGATGGCAC +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLTSCLG*DPQRWH
Trigger: GTGCCATCGCTGTGGATCCAATCCGAGGCAACTTGT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGTAGAGGTGAGATCGTaGTTCTGGGAGATACTCATC +
Preference number: 5 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKVEVRS*FWEILI
Trigger: GATGAGTATCTCCCAGAACAACGATCTCACCTCTAC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGTGAAGACCTCGGTGTaGGAACCTATGTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVVKTSV*EPMLSS
Trigger: GGAAGACAACATAGGTTCCAACACCGAGGTCTTCAC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTCCATAAAACTTGGATaGGCAGTGGCAGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVSIKLG*AVAAEA
Trigger: GGCTTCTGCTGCCACTGCCAATCCAAGTTTTATGGA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACCCATAATATCCGGGTaGACAACGGCAGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLPIISG*TTAGEG
Trigger: TCCTTCTCCTGCCGTTGTCAACCCGGATATTATGGG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTGCCTTTGCAGTCACTGTTCTTTAGGGTCCAGGTTCTGATTGTAAACTCCAAGGGCTTTGTATCCACTTaGGATTGGAAGGAAACATCA +
Preference number: 5 (lower is better)
Translates to: LPLQSLFFRVQVLIVNSKGFVST*DWKETS
Trigger: TGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCC...CTTGGAGTTTACAATCAGAACCTGGACCCTAAAGAACAGTGACTGCAAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAAAGTCCCTCAGCAGTTaGAGTGATACGAACCGTCTC +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLKSLSS*SDTNRL
Trigger: GAGACGGTTCGTATCACTCAAACTGCTGAGGGACTT...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGTAAGGCACCTGGCCTaGAATGTTGGTCTTAATGCT +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVVRHLA*NVGLNA
Trigger: AGCATTAAGACCAACATTCAAGGCCAGGTGCCTTAC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCGCGGTAGGACCATGTTaGGTTGATTGCACCAAAAGT +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVAVGPC*VDCTKS
Trigger: ACTTTTGGTGCAATCAACCAAACATGGTCCTACCGC...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATTGTCCGTCCAGTACATaGTTCTGCGGATGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: FLHYKMFILDAQERLMANCPSST*FCGCGL
Trigger: TAGACCACATCCGCAGAACAATGTACTGGACGGACA...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATGTCCGTCCAGTACATaGTTCTGCGGATGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLCPSST*FCGCGL
Trigger: TAGACCACATCCGCAGAACAATGTACTGGACGGACA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGTACACTCCAGTTTTTaGGTTCCTGCATCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: FLHYKMFILDAQERLMANVHSSF*VPASAQ
Trigger: CTGGGCAGATGCAGGAACCAAAAAACTGGAGTGTAC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGTACACTCCAGTTTTTaGGTTCCTGCATCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLVHSSF*VPASAQ
Trigger: CTGGGCAGATGCAGGAACCAAAAAACTGGAGTGTAC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTACCCATCAGTTCTGCATaGGCTTCTCCAACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLPISSA*ASPTVK
Trigger: CTTGACAGTTGGAGAAGCCAATGCAGAACTGATGGG...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGTAAGGCACCTGGCCTaGAATGTTGGTCTTAATGCT +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLVRHLA*NVGLNA
Trigger: AGCATTAAGACCAACATTCAAGGCCAGGTGCCTTAC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATCCCATAATATCCGGGTaGACAACGGCAGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDPIISG*TTAGEG
Trigger: TCCTTCTCCTGCCGTTGTCAACCCGGATATTATGGG...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CACATGTGCTTTAATTTCTTGGCCAGAAGGAATCCATGGCAAAAATCAGGTTTAGTACTTGAGGTTGTTTaGAATGACACGCCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: HMCFNFLARRNPWQKSGLVLEVV*NDTPSS
Trigger: ACTGGACGGCGTGTCATTCAAAACAACCTCAAGTAC...TAAACCTGATTTTTGCCATGGATTCCTTCTGGCCAAGAAATTAAAGCACATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TTTTTGCACTACAAAATGTTCATCTTGGATGCTCAGGAACGTCTAATGGCCAATGTAGAGGTGAGATCGTaGTTCTGGGAGATACTCATC +
Preference number: 5 (lower is better)
Translates to: FLHYKMFILDAQERLMANVEVRS*FWEILI
Trigger: GATGAGTATCTCCCAGAACAACGATCTCACCTCTAC...ATTGGCCATTAGACGTTCCTGAGCATCCAAGATGAACATTTTGTAGTGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATGTTCACAGGTTTCCTaGTTGGCAGCATTATACGTG +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLCSQVS*LAALYV
Trigger: CACGTATAATGCTGCCAACAAGGAAACCTGTGAACA...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATAAGTCCCTCAGCAGTTaGAGTGATACGAACCGTCTC +
Preference number: 5 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDKSLSS*SDTNRL
Trigger: GAGACGGTTCGTATCACTCAAACTGCTGAGGGACTT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCAGCGATGAAAGCCAGTaGCACATTCATTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVSDESQ*HIHFHP
Trigger: TGGATGAAAATGAATGTGCAACTGGCTTTCATCGCT...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTCAAAGGTTAAGCCATaGGGCAATCCAATGTCTGTA +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVSKVKP*GNPMSV
Trigger: TACAGACATTGGATTGCCCAATGGCTTAACCTTTGA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp ACTATAAATAATTGGTCCTTTCCCATCAGTTCTGCATTGGCTTCTCCAACTGTCTGTATCCACTTTGGATaGGAAGGAAACATCAATGCT +
Preference number: 5 (lower is better)
Translates to: TINNWSFPISSALASPTVCIHFG*EGNINA
Trigger: AGCATTGATGTTTCCTTCCAATCCAAAGTGGATACA...GACAGTTGGAGAAGCCAATGCAGAACTGATGGGAAAGGACCAATTATTTATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGAGCATTGTCTGTGGTaGTGTTCACAGGTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIEHCLW*CSQVSL
Trigger: CAAGGAAACCTGTGAACACAACCACAGACAATGCTC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTGCGGTAGGACCATGTTaGGTTGATTGCACCAAAAGT +
Preference number: 5 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIAVGPC*VDCTKS
Trigger: ACTTTTGGTGCAATCAACCAAACATGGTCCTACCGC...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATGTACTTGAGGTTGTTTaGAATGACACGCCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDVLEVV*NDTPSS
Trigger: ACTGGACGGCGTGTCATTCAAAACAACCTCAAGTAC...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CCATCAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTAATTCCTCTAAAGGCTTaGTATCCACTTTGGATTGGA +
Preference number: 5 (lower is better)
Translates to: PSVLHWLLQLSRFRIILLIPLKA*YPLWIG
Trigger: TCCAATCCAAAGTGGATACAAAGCCTTTAGAGGAAT...TAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTCACAGGTTTCCTTGTaGGCAGCATTATACGTGAAG +
Preference number: 5 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYISQVSL*AALYVK
Trigger: CTTCACGTATAATGCTGCCAACAAGGAAACCTGTGA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTTTTGACCGGGCCAATTaGATTGGTCACAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIFDRAN*IGHSKS
Trigger: AGATTTGCTGTGACCAATCAAATTGGCCCGGTCAAA...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATTTTGACCGGGCCAATTaGATTGGTCACAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDFDRAN*IGHSKS
Trigger: AGATTTGCTGTGACCAATCAAATTGGCCCGGTCAAA...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS TCA 90 bp AGAAAGGGTCAAAGGTTAAGCCATTGGGCAATCCAATGTCTGTATTaGTCAGAATTCTTCTGTTTTCTCCATCTAAAGATGACGTTTCAA +
Preference number: 5 (lower is better)
Translates to: RKGQRLSHWAIQCLY*SEFFCFLHLKMTFQ
Trigger: TTGAAACGTCATCTTTAGATGGAGAAAACAGAAGAATTCTGATCAATACAGACATTGGATTGCCCAATGGCTTAACCTTTGACCCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000555310.1
ENST00000556572.1
ENST00000617139.4
CDS-3UTR CAA 90 bp TATAAATGTGATACTTTACTTTCTGTGGGTACTTCTATAGAGGCACTACAGGATAGCGATGAAAGCCAGTaGCACATTCATTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: YKCDTLLSVGTSIEALQDSDESQ*HIHFHP
Trigger: TGGATGAAAATGAATGTGCAACTGGCTTTCATCGCT...ATCCTGTAGTGCCTCTATAGAAGTACCCACAGAAAGTAAAGTATCACATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS-3UTR CAA 90 bp CAGTTCTGCATTGGCTTCTCCAACTGTCAAGGTTTAGGATTATATTGTTATATTATGTGCTTTAATTTCTaGGCCAGAAGGAATCCATGG +
Preference number: 5 (lower is better)
Translates to: QFCIGFSNCQGLGLYCYIMCFNF*ARRNPW
Trigger: CCATGGATTCCTTCTGGCCAAGAAATTAAAGCACAT...AATATAACAATATAATCCTAAACCTTGACAGTTGGAGAAGCCAATGCAGAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 72 bp TCCAGCCCACTCTCCGCGCCGCGCCAGCCTCGAACCTaGATCTCCGCGGGCGCCTGGGCGGGGCGGGACTCC +
Preference number: 6 (lower is better)
Translates to: SSPLSAPRQPRT*ISAGAWAGRDS
Trigger: GGAGTCCCGCCCCGCCCAGGCGCCCGCGGAGATCCAGGTTCGAGGCTGGCGCGGCGCGGAGAGTGGGCTGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS GCA 72 bp ACAGCACCGGCCGCCCGGCCACCCGGTCCCCCTCCATaGTCGCTCGGCCGTGCGCTTACCCGCTGCACAACG +
Preference number: 6 (lower is better)
Translates to: TAPAARPPGPPP*SLGRALTRCTT
Trigger: CGTTGTGCAGCGGGTAAGCGCACGGCCGAGCGAGCATGGAGGGGGACCGGGTGGCCGGGCGGCCGGTGCTGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 72 bp GGTCACATCTGGCCGGGGCGTGGGCCGGACCATGGGTaGAGCGACGGTGGGTATACACGCAGGGGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: GHIWPGRGPDHG*SDGGYTRRGGA
Trigger: GGCACCACCCCTGCGTGTATACCCACCGTCGCTCCACCCATGGTCCGGCCCACGCCCCGGCCAGATGTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS GCA 72 bp CCCCACGACTCCCCGTGTGGGAAGAGCTCGTCTGGGTaGAGCGCCGCGGCCCGCAACATTAGCAACGGCAGC +
Preference number: 6 (lower is better)
Translates to: PHDSPCGKSSSG*SAAARNISNGS
Trigger: GCTGCCGTTGCTAATGTTGCGGGCCGCGGCGCTGCACCCAGACGAGCTCTTCCCACACGGGGAGTCGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 72 bp TGGGTGGAGCGACGGTGGGTATACACGCAGGGGTGGTaGCTGGCTGGGAGCGGGTGCCCTGCACCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: WVERRWVYTQGW*LAGSGCPAPLC
Trigger: GCAGAGAGGTGCAGGGCACCCGCTCCCAGCCAGGCACCACCCCTGCGTGTATACCCACCGTCGCTCCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 72 bp GAGCAGGAAGGTGCCCACAGATGGAGGGGTCACATCTaGCCGGGGCGTGGGCCGGACCATGGGTGGAGCGAC +
Preference number: 6 (lower is better)
Translates to: EQEGAHRWRGHI*PGRGPDHGWSD
Trigger: GTCGCTCCACCCATGGTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTCCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 72 bp TGCCCACAGATGGAGGGGTCACATCTGGCCGGGGCGTaGGCCGGACCATGGGTGGAGCGACGGTGGGTATAC +
Preference number: 6 (lower is better)
Translates to: CPQMEGSHLAGA*AGPWVERRWVY
Trigger: GTATACCCACCGTCGCTCCACCCATGGTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCATCTGTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS TCA 72 bp AAGTGTTCAGCTCTCCCGAGGGCAGCGCCCCGCGCTTaGCCTCCTCGTAAGCGCCTACCTGCTCCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: KCSALPRAAPRA*PPRKRLPAPRW
Trigger: CCACCTGGGAGCAGGTAGGCGCTTACGAGGAGGTCAAGCGCGGGGCGCTGCCCTCGGGAGAGCTGAACACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 72 bp CGGGGGAGGTGTCCTCTCGGTACAGGACTCGGCCTCTaGCGTGGCTCGTGTCGATGTCCGCCAGAAAAGGGG +
Preference number: 6 (lower is better)
Translates to: RGRCPLGTGLGL*RGSCRCPPEKG
Trigger: CCCCTTTTCTGGCGGACATCGACACGAGCCACGGCAGAGGCCGAGTCCTGTACCGAGAGGACACCTCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp AGGCAAAGACCCGGTCCACGTTCAGCTGCTGGGTGGTaGGGAAGGACGGGTGTCTGGGGGCGTGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: RQRPGPRSAAGW*GRTGVWGRACT
Trigger: TGTGCAGGCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp ACAAGGCAAAGACCCGGTCCACGTTCAGCTGCTGGGTaGTGGGGAAGGACGGGTGTCTGGGGGCGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: TRQRPGPRSAAG*WGRTGVWGRAC
Trigger: GCAGGCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp GCGACGGTGGGTATACACGCAGGGGTGGTGCCTGGCTaGGAGCGGGTGCCCTGCACCTCTCTGCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: ATVGIHAGVVPG*ERVPCTSLPSL
Trigger: CAAAGATGGCAGAGAGGTGCAGGGCACCCGCTCCCAGCCAGGCACCACCCCTGCGTGTATACCCACCGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 72 bp CTGGCCCTGAGTATAGAGCAGGAAGGTGCCCACAGATaGAGGGGTCACATCTGGCCGGGGCGTGGGCCGGAC +
Preference number: 6 (lower is better)
Translates to: LALSIEQEGAHR*RGHIWPGRGPD
Trigger: GTCCGGCCCACGCCCCGGCCAGATGTGACCCCTCCATCTGTGGGCACCTTCCTGCTCTATACTCAGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS TCA 72 bp GCCCATCGCCGGCATAACCAGGCAGGCAGGCACAGCTaGACGTGCTGCCTCCATGGTGAACACACCGGGCCT +
Preference number: 6 (lower is better)
Translates to: AHRRHNQAGRHS*TCCLHGEHTGP
Trigger: AGGCCCGGTGTGTTCACCATGGAGGCAGCACGTTCAGCTGTGCCTGCCTGCCTGGTTATGCCGGCGATGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 72 bp GAGGTGTCCTCTCGGTACAGGACTCGGCCTCTGCCGTaGCTCGTGTCGATGTCCGCCAGAAAAGGGGCGATG +
Preference number: 6 (lower is better)
Translates to: EVSSRYRTRPLP*LVSMSARKGAM
Trigger: CATCGCCCCTTTTCTGGCGGACATCGACACGAGCCACGGCAGAGGCCGAGTCCTGTACCGAGAGGACACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp AGTGCTCCAGCAGGTTTTCCCTCCAGCGCTCACAGATaGTCGGGGGCCTCTGGGTGGGCTCTGGTGATGGTC +
Preference number: 6 (lower is better)
Translates to: SAPAGFPSSAHR*SGASGWALVMV
Trigger: GACCATCACCAGAGCCCACCCAGAGGCCCCCGACCATCTGTGAGCGCTGGAGGGAAAACCTGCTGGAGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp TTATACAAGGCAAAGACCCGGTCCACGTTCAGCTGCTaGGTGGTGGGGAAGGACGGGTGTCTGGGGGCGTGC +
Preference number: 6 (lower is better)
Translates to: LYKAKTRSTFSC*VVGKDGCLGAC
Trigger: GCACGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGTATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS TCA 72 bp GTAGAAGTGCAGGGGATTCGCCAGCTTCACCACGGCTaGGCTTTCGTCGTCGCCTTCCTGCAGGAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: VEVQGIRQLHHG*AFVVAFLQELV
Trigger: GACCAGCTCCTGCAGGAAGGCGACGACGAAAGCTCAGCCGTGGTGAAGCTGGCGAATCCCCTGCACTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 72 bp TCATTATACAAGGCAAAGACCCGGTCCACGTTCAGCTaGTGGGTGGTGGGGAAGGACGGGTGTCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: SLYKAKTRSTFS*WVVGKDGCLGA
Trigger: CGCCCCCAGACACCCGTCCTTCCCCACCACCCAGCAGCTGAACGTGGACCGGGTCTTTGCCTTGTATAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS GCA 72 bp AACCAGTGCTGCCATGACACTGTAGGGGCAGGAAGTTaGCCTGCTCGTCGCATTGGGGGATGTGGAACCGGG +
Preference number: 6 (lower is better)
Translates to: NQCCHDTVGAGS*PARRIGGCGTG
Trigger: CCCGGTTCCACATCCCCCAATGCGACGAGCAGGGCAACTTCCTGCCCCTACAGTGTCATGGCAGCACTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp AAGTCGCTCTTTCCGTGGCACTGCAGGGGGATGAAGTaGCCCAGGTCATCGCACTGGGGCACGTACTGGTCA +
Preference number: 6 (lower is better)
Translates to: KSLFPWHCRGMK*PRSSHWGTYWS
Trigger: TGACCAGTACGTGCCCCAGTGCGATGACCTGGGCCACTTCATCCCCCTGCAGTGCCACGGAAAGAGCGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 72 bp TTCCCATTCACTCGGTACAGGACTCGGCCTCTGCCGTaGCTCGTGTCGATGTCCGCCAGAAAAGGGGCGATG +
Preference number: 6 (lower is better)
Translates to: FPFTRYRTRPLP*LVSMSARKGAM
Trigger: CATCGCCCCTTTTCTGGCGGACATCGACACGAGCCACGGCAGAGGCCGAGTCCTGTACCGAGTGAATGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS GCA 72 bp CCCACGATATACGCATGCAGGTCCACATCAGTGAAGTaGACGGGTGTATGGCCCACGTGGAGGTGGCCACTC +
Preference number: 6 (lower is better)
Translates to: PTIYACRSTSVK*TGVWPTWRWPL
Trigger: GAGTGGCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGACCTGCATGCGTATATCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 72 bp TCACTTTCCCATTCACTCGGTACAGGACTCGGCCTCTaGCGTGGCTCGTGTCGATGTCCGCCAGAAAAGGGG +
Preference number: 6 (lower is better)
Translates to: SLSHSLGTGLGL*RGSCRCPPEKG
Trigger: CCCCTTTTCTGGCGGACATCGACACGAGCCACGGCAGAGGCCGAGTCCTGTACCGAGTGAATGGGAAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS CCA 72 bp GGGAACATCCATTTCCGAAGGCACTGGCCCTCCATCTaGGTAGGGCTGGATGCTTCCGTTTTCGGGGTACGG +
Preference number: 6 (lower is better)
Translates to: GNIHFRRHWPSI*VGLDASVFGVR
Trigger: CCGTACCCCGAAAACGGAAGCATCCAGCCCTACCCAGATGGAGGGCCAGTGCCTTCGGAAATGGATGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 90 bp GAAGAGTGGGCAGCGGAAAGGTCTCCAACTGCAGCTGGCCTGACATaGTCCAACGGGGAAGTGCTGCCGATATGGAAAGCCCACACTCCA +
Preference number: 6 (lower is better)
Translates to: EEWAAERSPTAAGLT*SNGEVLPIWKAHTP
Trigger: TGGAGTGTGGGCTTTCCATATCGGCAGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCCGCTGCCCACTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS TCA 72 bp CATTGCCCACGATATACGCATGCAGGTCCACATCAGTaGAGTGCACGGGTGTATGGCCCACGTGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: HCPRYTHAGPHQ*SARVYGPRGGG
Trigger: GCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGACCTGCATGCGTATATCGTGGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS TCA 72 bp ACGGGTGTCTGGGGGCGTGCCTGCACACCTGGTAAGTaGTGTTCTGGTGGATGCGGTAGGACCATGTTTGGT +
Preference number: 6 (lower is better)
Translates to: TGVWGRACTPGK*CSGGCGRTMFG
Trigger: ACCAAACATGGTCCTACCGCATCCACCAGAACATCACTTACCAGGTGTGCAGGCACGCCCCCAGACACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS TCA 72 bp GTGGAGCCAGGTGGAGTCTGGGTACCAGGAACTTCATaGCCATCAGGGTCCACGCACCAGCAGAAACCAGTG +
Preference number: 6 (lower is better)
Translates to: VEPGGVWVPGTS*PSGSTHQQKPV
Trigger: CACTGGTTTCTGCTGGTGCGTGGACCCTGATGGTCATGAAGTTCCTGGTACCCAGACTCCACCTGGCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000617139.4
CDS GCA 72 bp GGGAACAGAAGAGTGGGCAGCGGAAAGGTCTCCAACTaGAGCTGGCCTGACATTGTCCAACGGGGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: GNRRVGSGKVSN*SWPDIVQRGSA
Trigger: AGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCCGCTGCCCACTCTTCTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp TGTCCGCCAGAAAAGGGGCGATGGCCGGGAAGTCGGTaGGGAAATCATAGTCCACATACTGCGTTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: CPPEKGRWPGSR*GNHSPHTAFPW
Trigger: CCAGGGAAACGCAGTATGTGGACTATGATTTCCCCACCGACTTCCCGGCCATCGCCCCTTTTCTGGCGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CCA 72 bp GGCCTGACATTGTCCAACGGGGAAGTGCTGCCGATATaGAAAGCCCACACTCCAGGGATCCCCAGGTTGCTT +
Preference number: 6 (lower is better)
Translates to: GLTLSNGEVLPI*KAHTPGIPRLL
Trigger: AAGCAACCTGGGGATCCCTGGAGTGTGGGCTTTCCATATCGGCAGCACTTCCCCGTTGGACAATGTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp AGAAGAGTGGGCAGCGGAAAGGTCTCCAACTGCAGCTaGCCTGACATTGTCCAACGGGGAAGTGCTGCCGAT +
Preference number: 6 (lower is better)
Translates to: RRVGSGKVSNCS*PDIVQRGSAAD
Trigger: ATCGGCAGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCCGCTGCCCACTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp AGGATGAGCTGGGGGAACATCCATTTCCGAAGGCACTaGCCCTCCATCTGGGTAGGGCTGGATGCTTCCGTT +
Preference number: 6 (lower is better)
Translates to: RMSWGNIHFRRH*PSIWVGLDASV
Trigger: AACGGAAGCATCCAGCCCTACCCAGATGGAGGGCCAGTGCCTTCGGAAATGGATGTTCCCCCAGCTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp GCATGCAGGTCCACATCAGTGAAGTGCACGGGTGTATaGCCCACGTGGAGGTGGCCACTCACTTTCCCATTC +
Preference number: 6 (lower is better)
Translates to: ACRSTSVKCTGV*PTWRWPLTFPF
Trigger: GAATGGGAAAGTGAGTGGCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGACCTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS CAA 72 bp GCAGCGGAAAGGTCTCCAACTGCAGCTGGCCTGACATaGTCCAACGGGGAAGTGCTGCCGATATGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: AAERSPTAAGLT*SNGEVLPIWKA
Trigger: GGCTTTCCATATCGGCAGCACTTCCCCGTTGGACAATGTCAGGCCAGCTGCAGTTGGAGACCTTTCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 72 bp ATTGGCAGTGGCAGCAGAAGCCAGTGGCATAGTCCGTaGAGAAGGCATGCCGGGAGCATTGTCTGTGGTTGT +
Preference number: 6 (lower is better)
Translates to: IGSGSRSQWHSP*RRHAGSIVCGC
Trigger: ACAACCACAGACAATGCTCCCGGCATGCCTTCTGCACGGACTATGCCACTGGCTTCTGCTGCCACTGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 72 bp CACGGGGATTCACCAGATCTGTGTAGAAGAGGACCTTaGGCTCAGAGCCATCCAGCAGGGCGCTCTCTATCT +
Preference number: 6 (lower is better)
Translates to: HGDSPDLCRRGP*AQSHPAGRSLS
Trigger: AGATAGAGAGCGCCCTGCTGGATGGCTCTGAGCGCAAGGTCCTCTTCTACACAGATCTGGTGAATCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS GCA 72 bp GCTGCCTTGCTCATGCACAGCTGCAGTGAGCAACACTaGACTGTGATCCTGCAGGCAACAGAGCAGAGTAGC +
Preference number: 6 (lower is better)
Translates to: AALLMHSCSEQH*TVILQATEQSS
Trigger: GCTACTCTGCTCTGTTGCCTGCAGGATCACAGTGCAGTGTTGCTCACTGCAGCTGTGCATGAGCAAGGCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553297.1
CDS CCA 72 bp GAGCTGGAAGCTGAAGCTGGACATTGTAAGACTCTTTaGGGCGGGTTCCAAGGAACTGCAGGCCGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: ELEAEAGHCKTL*GGFQGTAGRWQ
Trigger: CTGCCAACGGCCTGCAGTTCCTTGGAACCCGCCCCAAAGAGTCTTACAATGTCCAGCTTCAGCTTCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp ATCATCAGCCTCCCCTCGGCAGAAGCCCACCCGAGCTaGAAGCTGAAGCTGGACATTGTAAGACTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: IISLPSAEAHPS*KLKLDIVRLFG
Trigger: CCCAAAGAGTCTTACAATGTCCAGCTTCAGCTTCCAGCTCGGGTGGGCTTCTGCCGAGGGGAGGCTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp TCCACATCAGTGAAGTGCACGGGTGTATGGCCCACGTaGAGGTGGCCACTCACTTTCCCATTCACTCGGTAC +
Preference number: 6 (lower is better)
Translates to: STSVKCTGVWPT*RWPLTFPFTRY
Trigger: GTACCGAGTGAATGGGAAAGTGAGTGGCCACCTCCACGTGGGCCATACACCCGTGCACTTCACTGATGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS CCA 72 bp ACTCTTTGGGGCGGGTTCCAAGGAACTGCAGGCCGTTaGCAGGATAAAGAAAGAGGGCGTAGCTATCAGACC +
Preference number: 6 (lower is better)
Translates to: TLWGGFQGTAGR*QDKERGRSYQT
Trigger: GGTCTGATAGCTACGCCCTCTTTCTTTATCCTGCCAACGGCCTGCAGTTCCTTGGAACCCGCCCCAAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 90 bp ACTCACAGGTGTAATCTACACCTGTCCCTGGATGGCACCGTGCTGTaGTGTCACACATGTGGCTCCCATCATAGCAAGGATTCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: THRCNLHLSLDGTVL*CHTCGSHHSKDSPE
Trigger: CTCCGGGGAATCCTTGCTATGATGGGAGCCACATGTGTGACACAACAGCACGGTGCCATCCAGGGACAGGTGTAGATTACACCTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS TCA 72 bp CACTCCGGCACTCACACCTGTAGCTTCCAGGCAAGTTaGTACATACAGAGTTGGGGCCACAGCGATGAAAGC +
Preference number: 6 (lower is better)
Translates to: HSGTHTCSFQAS*YIQSWGHSDES
Trigger: GCTTTCATCGCTGTGGCCCCAACTCTGTATGTATCAACTTGCCTGGAAGCTACAGGTGTGAGTGCCGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp AGATGCGCACTCACAGGTGTAATCTACACCTGTCCCTaGATGGCACCGTGCTGTTGTGTCACACATGTGGCT +
Preference number: 6 (lower is better)
Translates to: RCALTGVIYTCP*MAPCCCVTHVA
Trigger: AGCCACATGTGTGACACAACAGCACGGTGCCATCCAGGGACAGGTGTAGATTACACCTGTGAGTGCGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CAA 72 bp AGTGGCATAGTCCGTGCAGAAGGCATGCCGGGAGCATaGTCTGTGGTTGTGTTCACAGGTTTCCTTGTTGGC +
Preference number: 6 (lower is better)
Translates to: SGIVRAEGMPGA*SVVVFTGFLVG
Trigger: GCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTCCCGGCATGCCTTCTGCACGGACTATGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 72 bp GCTCAGGTAGTTCTCTGGGTCAAGTCCCTCAGCAGTTaGAGTGATACGAACCGTCTCCTCTCCCGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: AQVVLWVKSLSS*SDTNRLLSRVE
Trigger: TTCTACCCGGGAGAGGAGACGGTTCGTATCACTCAAACTGCTGAGGGACTTGACCCAGAGAACTACCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS GCA 72 bp ACAGGTGTAATCTACACCTGTCCCTGGATGGCACCGTaGTGTTGTGTCACACATGTGGCTCCCATCATAGCA +
Preference number: 6 (lower is better)
Translates to: TGVIYTCPWMAP*CCVTHVAPIIA
Trigger: TGCTATGATGGGAGCCACATGTGTGACACAACAGCACGGTGCCATCCAGGGACAGGTGTAGATTACACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp CTGGGCCCCCTACCTCTCCCAGAGATGTTCCTTCTTTaGTGTGAGGATCCAAGGTGGAAGATTCCTCTAAAG +
Preference number: 6 (lower is better)
Translates to: LGPLPLPEMFLL*CEDPRWKIPLK
Trigger: CTTTAGAGGAATCTTCCACCTTGGATCCTCACACCAAAGAAGGAACATCTCTGGGAGAGGTAGGGGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp TCCAGTACAAGTTGCCTCGGATTGGATCCACAGCGATaGCACGGGGATTCACCAGATCTGTGTAGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: SSTSCLGLDPQR*HGDSPDLCRRG
Trigger: TCCTCTTCTACACAGATCTGGTGAATCCCCGTGCCATCGCTGTGGATCCAATCCGAGGCAACTTGTACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp GGAACAGTTGGCCTTTTCAGGCTTGTCCAGAATTTGTaGGGCTCACCTCCTCCAGTCTGTGTGGTAGAAGTG +
Preference number: 6 (lower is better)
Translates to: GTVGLFRLVQNL*GSPPPVCVVEV
Trigger: CACTTCTACCACACAGACTGGAGGAGGTGAGCCCCACAAATTCTGGACAAGCCTGAAAAGGCCAACTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556686.1
CDS CAA 90 bp GCAGAAGCCAGTGGCATAGTCCGTGCAGAAGGCATGCCGGGAGCATaGTCTGTGGTTGTGTTCACAGGTTTCCTTGTTGGCAGCATTATA +
Preference number: 6 (lower is better)
Translates to: AEASGIVRAEGMPGA*SVVVFTGFLVGSII
Trigger: TATAATGCTGCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTCCCGGCATGCCTTCTGCACGGACTATGCCACTGGCTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 90 bp GCAGGGCGCTCTCTATCTTATCCAGGACACTGTCCGTCCAGTACATaGTTCTGCGGATGTGGTCTATGGCAAGTCCTTCAGGGCTTATCA +
Preference number: 6 (lower is better)
Translates to: AGRSLSYPGHCPSST*FCGCGLWQVLQGLS
Trigger: TGATAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACAGTGTCCTGGATAAGATAGAGAGCGCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CAA 90 bp GGTGGAGTCAGGTATGCACTGAAATCCATCCCCATAATATCCGGGTaGACAACGGCAGGAGAAGGAACCAGGAGTATTGTAGCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: GGVRYALKSIPIISG*TTAGEGTRSIVAGS
Trigger: GCTACCTGCTACAATACTCCTGGTTCCTTCTCCTGCCGTTGTCAACCCGGATATTATGGGGATGGATTTCAGTGCATACCTGACTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS TCA 72 bp AGTGGTACAGCTCCTTGTAGGGAGAGATGTGGGCTGTaGAATTTGCTGAGACGTAAGGCACCTGGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: SGTAPCRERCGL*NLLRRKAPGLE
Trigger: TTCAAGGCCAGGTGCCTTACGTCTCAGCAAATTTCACAGCCCACATCTCTCCCTACAAGGAGCTGTACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS GCA 72 bp AGGTGGGGTGATCAAGATGCAAGTATGCCGGTCATCTaGAAACTCATAACCACTCCGGCACTCACACCTGTA +
Preference number: 6 (lower is better)
Translates to: RWGDQDASMPVI*KLITTPALTPV
Trigger: TACAGGTGTGAGTGCCGGAGTGGTTATGAGTTTGCAGATGACCGGCATACTTGCATCTTGATCACCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216286.10
ENST00000617139.4
CDS GCA 72 bp AGGTTACATTTCCCCTTTGTTCACACTCAGCTGCCTTaGTCATGCACAGCTGCAGTGAGCAACACTGCACTG +
Preference number: 6 (lower is better)
Translates to: RLHFPFVHTQLP*SCTAAVSNTAL
Trigger: CAGTGCAGTGTTGCTCACTGCAGCTGTGCATGAGCAAGGCAGCTGAGTGTGAACAAAGGGGAAATGTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553297.1
CDS CCA 72 bp TCCACTTTGGATTGGAAGGAAACATCAATGCTGCTGTaGCCATTCAATGCCTCCTCTGGTTCACCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: STLDWKETSMLL*PFNASSGSPGR
Trigger: CCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp AGGACACTGTCCGTCCAGTACATTGTTCTGCGGATGTaGTCTATGGCAAGTCCTTCAGGGCTTATCAGACCT +
Preference number: 6 (lower is better)
Translates to: RTLSVQYIVLRM*SMASPSGLIRP
Trigger: AGGTCTGATAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACAGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp TGGGGACCAATCACCGGCTCTGAGAAAGTTCGGCAGTaGCCACCACATCTGGTTCTCGTTAACTTTTCTAAG +
Preference number: 6 (lower is better)
Translates to: WGPITGSEKVRQ*PPHLVLVNFSK
Trigger: CTTAGAAAAGTTAACGAGAACCAGATGTGGTGGCCACTGCCGAACTTTCTCAGAGCCGGTGATTGGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617139.4
CDS CAA 72 bp TCCGTGCAGAAGGCATGCCGGGAGCATTGTCTGTGGTaGTGTTCACAGGTTTCCTTGTTGGCAGCATTATAC +
Preference number: 6 (lower is better)
Translates to: SVQKACREHCLW*CSQVSLLAALY
Trigger: GTATAATGCTGCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTCCCGGCATGCCTTCTGCACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 72 bp TGTAATCTACACCTGTCCCTGGATGGCACCGTGCTGTaGTGTCACACATGTGGCTCCCATCATAGCAAGGAT +
Preference number: 6 (lower is better)
Translates to: CNLHLSLDGTVL*CHTCGSHHSKD
Trigger: ATCCTTGCTATGATGGGAGCCACATGTGTGACACAACAGCACGGTGCCATCCAGGGACAGGTGTAGATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS CAA 72 bp TCTGGAACAGTTGGCCTTTTCAGGCTTGTCCAGAATTaGTGGGGCTCACCTCCTCCAGTCTGTGTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: SGTVGLFRLVQN*WGSPPPVCVVE
Trigger: TTCTACCACACAGACTGGAGGAGGTGAGCCCCACAAATTCTGGACAAGCCTGAAAAGGCCAACTGTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556686.1
CDS CAA 90 bp GCATGCCGGGAGCATTGTCTGTGGTTGTGTTCACAGGTTTCCTTGTaGGCAGCATTATACGTGAAGACCTCGGTGTTGGAACCTATGTTG +
Preference number: 6 (lower is better)
Translates to: ACREHCLWLCSQVSL*AALYVKTSVLEPML
Trigger: CAACATAGGTTCCAACACCGAGGTCTTCACGTATAATGCTGCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTCCCGGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 90 bp AAGGCATGCCGGGAGCATTGTCTGTGGTTGTGTTCACAGGTTTCCTaGTTGGCAGCATTATACGTGAAGACCTCGGTGTTGGAACCTATG +
Preference number: 6 (lower is better)
Translates to: KACREHCLWLCSQVS*LAALYVKTSVLEPM
Trigger: CATAGGTTCCAACACCGAGGTCTTCACGTATAATGCTGCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTCCCGGCATGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 90 bp GGTCTTAATGCTCAGGTAGTTCTCTGGGTCAAGTCCCTCAGCAGTTaGAGTGATACGAACCGTCTCCTCTCCCGGGTAGAATGTAACTTC +
Preference number: 6 (lower is better)
Translates to: GLNAQVVLWVKSLSS*SDTNRLLSRVECNF
Trigger: GAAGTTACATTCTACCCGGGAGAGGAGACGGTTCGTATCACTCAAACTGCTGAGGGACTTGACCCAGAGAACTACCTGAGCATTAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS TCA 72 bp CCCCCTACCTCTCCCAGAGATGTTCCTTCTTTGGTGTaGGGATCCAAGGTGGAAGATTCCTCTAAAGGCTTT +
Preference number: 6 (lower is better)
Translates to: PPTSPRDVPSLV*GSKVEDSSKGF
Trigger: AAAGCCTTTAGAGGAATCTTCCACCTTGGATCCTCACACCAAAGAAGGAACATCTCTGGGAGAGGTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 72 bp TTGGAAGGAAACATCAATGCTGCTGTGGCCATTCAATaGCTCCTCTGGTTCACCCGGAAGGTATTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LEGNINAAVAIQ*LLWFTRKVFSF
Trigger: GAAGCTGAATACCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 72 bp TCTTATCCAGGACACTGTCCGTCCAGTACATTGTTCTaGGGATGTGGTCTATGGCAAGTCCTTCAGGGCTTA +
Preference number: 6 (lower is better)
Translates to: SYPGHCPSSTLF*GCGLWQVLQGL
Trigger: TAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACAGTGTCCTGGATAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS GCA 72 bp ACCATCCCTCCTCCAGTCTGTGTGGTAGAAGTGATCTaGATAGCTTACGATGCTGAAGGGGTACTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: TIPPPVCVVEVI*IAYDAEGVLEV
Trigger: AACCTCAAGTACCCCTTCAGCATCGTAAGCTATGCAGATCACTTCTACCACACAGACTGGAGGAGGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000555310.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp AACATCAATGCTGCTGTGGCCATTCAATGCCTCCTCTaGTTCACCCGGAAGGTATTCAGCTTCCTCCTCATT +
Preference number: 6 (lower is better)
Translates to: NINAAVAIQCLL*FTRKVFSFLLI
Trigger: AATGAGGAGGAAGCTGAATACCTTCCGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp GTAACTTCGAAGAACAATTTCTTCTTCAGGATGAGCTaGGGGAACATCCATTTCCGAAGGCACTGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: VTSKNNFFFRMS*GNIHFRRHWPS
Trigger: GGAGGGCCAGTGCCTTCGGAAATGGATGTTCCCCCAGCTCATCCTGAAGAAGAAATTGTTCTTCGAAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp CTTCAGGCAGACAGTGCTTCCCATTTCCATAAAACTTaGATTGGCAGTGGCAGCAGAAGCCAGTGGCATAGT +
Preference number: 6 (lower is better)
Translates to: LQADSASHFHKT*IGSGSRSQWHS
Trigger: ACTATGCCACTGGCTTCTGCTGCCACTGCCAATCCAAGTTTTATGGAAATGGGAAGCACTGTCTGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 72 bp CGGGAGCATTGTCTGTGGTTGTGTTCACAGGTTTCCTaGTTGGCAGCATTATACGTGAAGACCTCGGTGTTG +
Preference number: 6 (lower is better)
Translates to: REHCLWLCSQVS*LAALYVKTSVL
Trigger: CAACACCGAGGTCTTCACGTATAATGCTGCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS TCA 72 bp GGAGTGGGGTCTGAATCCTCTTTGACCGGGCCAATTTaGTTGGTCACAGCAAATCTAAGCACTCTTTCTTCG +
Preference number: 6 (lower is better)
Translates to: GVGSESSLTGPI*LVTANLSTLSS
Trigger: CGAAGAAAGAGTGCTTAGATTTGCTGTGACCAATCAAATTGGCCCGGTCAAAGAGGATTCAGACCCCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000556572.1
ENST00000617139.4
CDS GCA 72 bp ATAAAGAAAGAGGGCGTAGCTATCAGACCCATCAGATaGCAAAACTGCCTGGAAAGTGTTCAGCTCTCCCGA +
Preference number: 6 (lower is better)
Translates to: IKKEGVAIRPIR*QNCLESVQLSR
Trigger: TCGGGAGAGCTGAACACTTTCCAGGCAGTTTTGGCATCTGATGGGTCTGATAGCTACGCCCTCTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS GCA 72 bp TTGTATCCACTTTGGATTGGAAGGAAACATCAATGCTaGTGTGGCCATTCAATGCCTCCTCTGGTTCACCCG +
Preference number: 6 (lower is better)
Translates to: LYPLWIGRKHQC*CGHSMPPLVHP
Trigger: CGGGTGAACCAGAGGAGGCATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CCA 72 bp TGTCCGTCCAGTACATTGTTCTGCGGATGTGGTCTATaGCAAGTCCTTCAGGGCTTATCAGACCTGAATTCA +
Preference number: 6 (lower is better)
Translates to: CPSSTLFCGCGL*QVLQGLSDLNS
Trigger: TGAATTCAGGTCTGATAAGCCCTGAAGGACTTGCCATAGACCACATCCGCAGAACAATGTACTGGACGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000553297.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp CGGGTGAAATCTAGGCTCAGCCACTTAGTAGCCATGTaGCTTTGGGCATTTAACCTCTATGCGTTTGTCTCA +
Preference number: 6 (lower is better)
Translates to: RVKSRLSHLVAM*LWAFNLYAFVS
Trigger: TGAGACAAACGCATAGAGGTTAAATGCCCAAAGCCACATGGCTACTAAGTGGCTGAGCCTAGATTTCACCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553297.1
CDS GCA 72 bp ATTTTGGAACTCACAGATGCAAGTATGCCGGTCATCTaGAAACTCATAACCACTCCGGCACTCACACCTGTA +
Preference number: 6 (lower is better)
Translates to: ILELTDASMPVI*KLITTPALTPV
Trigger: TACAGGTGTGAGTGCCGGAGTGGTTATGAGTTTGCAGATGACCGGCATACTTGCATCTGTGAGTTCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554284.1
CDS GCA 72 bp GCATTCATCTACATAGATGCAAGTATGCCGGTCATCTaGAAACTCATAACCACTCCGGCACTCACACCTGTA +
Preference number: 6 (lower is better)
Translates to: AFIYIDASMPVI*KLITTPALTPV
Trigger: TACAGGTGTGAGTGCCGGAGTGGTTATGAGTTTGCAGATGACCGGCATACTTGCATCTATGTAGATGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556572.1
CDS CCA 72 bp GCCTTGAATGTTGGTCTTAATGCTCAGGTAGTTCTCTaGGTCAAGTCCCTCAGCAGTTTGAGTGATACGAAC +
Preference number: 6 (lower is better)
Translates to: ALNVGLNAQVVL*VKSLSSLSDTN
Trigger: GTTCGTATCACTCAAACTGCTGAGGGACTTGACCCAGAGAACTACCTGAGCATTAAGACCAACATTCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216286.10
ENST00000554284.1
ENST00000617139.4
CDS CAA 72 bp GAGCATTGTCTGTGGTTGTGTTCACAGGTTTCCTTGTaGGCAGCATTATACGTGAAGACCTCGGTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: EHCLWLCSQVSL*AALYVKTSVLE
Trigger: TTCCAACACCGAGGTCTTCACGTATAATGCTGCCAACAAGGAAACCTGTGAACACAACCACAGACAATGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 72 bp AGGTATGCACTGAAATCCATCCCCATAATATCCGGGTaGACAACGGCAGGAGAAGGAACCAGGAGTATTGTA +
Preference number: 6 (lower is better)
Translates to: RYALKSIPIISG*TTAGEGTRSIV
Trigger: TACAATACTCCTGGTTCCTTCTCCTGCCGTTGTCAACCCGGATATTATGGGGATGGATTTCAGTGCATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000556572.1
ENST00000557051.1
ENST00000617139.4
CDS CCA 72 bp GACTGCAGTTATCCCGTAGAGGTGAGATCGTTGTTCTaGGAGATACTCATCAGTAAACTGGCCACTATGTTT +
Preference number: 6 (lower is better)
Translates to: DCSYPVEVRSLF*EILISKLATMF
Trigger: AAACATAGTGGCCAGTTTACTGATGAGTATCTCCCAGAACAACGATCTCACCTCTACGGGATAACTGCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216286.10
ENST00000555310.1
ENST00000556572.1
ENST00000556686.1
ENST00000617139.4
CDS CAA 90 bp AAACTCCAAGTCTTCCTTTACATTACTGTACTTACTTTCTTCCTGTaGGGCAGTAGGGGTAGACTGCAGTTATCCCGTAGAGGTGAGATC +
Preference number: 6 (lower is better)
Translates to: KLQVFLYITVLTFFL*GSRGRLQLSRRGEI
Trigger: GATCTCACCTCTACGGGATAACTGCAGTCTACCCCTACTGCCCAACAGGAAGAAAGTAAGTACAGTAATGTAAAGGAAGACTTGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216286.10
ENST00000555310.1
ENST00000556572.1
ENST00000556686.1
ENST00000617139.4
CDS CCA 72 bp AGGTGGAAGATTCCTCTAAAGGCTTTGTATCCACTTTaGATTGGAAGGAAACATCAATGCTGCTGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: RWKIPLKALYPL*IGRKHQCCCGH
Trigger: ATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCCTTTAGAGGAATCTTCCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 72 bp AAGGTGGAAGATTCCTCTAAAGGCTTTGTATCCACTTaGGATTGGAAGGAAACATCAATGCTGCTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: KVEDSSKGFVST*DWKETSMLLWP
Trigger: TGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCCTTTAGAGGAATCTTCCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS CAA 72 bp GTCTTCCTTTACATTACTGTACTTACTTTCTTCCTGTaGGGCAGTAGGGGTAGACTGCAGTTATCCCGTAGA +
Preference number: 6 (lower is better)
Translates to: VFLYITVLTFFL*GSRGRLQLSRR
Trigger: TCTACGGGATAACTGCAGTCTACCCCTACTGCCCAACAGGAAGAAAGTAAGTACAGTAATGTAAAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216286.10
ENST00000555310.1
ENST00000556572.1
ENST00000556686.1
ENST00000617139.4
CDS TCA 72 bp ATACTCATCAGTAAACTGGCCACTATGTTTATTTACTaGTACAACACCATCCCTCCTCCAGTCTGTGTGGTA +
Preference number: 6 (lower is better)
Translates to: ILISKLATMFIY*YNTIPPPVCVV
Trigger: TACCACACAGACTGGAGGAGGGATGGTGTTGTATCAGTAAATAAACATAGTGGCCAGTTTACTGATGAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216286.10
ENST00000555310.1
ENST00000556572.1
ENST00000617139.4
CDS CCA 72 bp GAAGATTCCTCTAAAGGCTTTGTATCCACTTTGGATTaGAAGGAAACATCAATGCTGCTGTGGCCATTCAAT +
Preference number: 6 (lower is better)
Translates to: EDSSKGFVSTLD*KETSMLLWPFN
Trigger: ATTGAATGGCCACAGCAGCATTGATGTTTCCTTCCAATCCAAAGTGGATACAAAGCCTTTAGAGGAATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216286.10
CDS TCA 72 bp ATACTCATCAGTAAACTGGCCACTATGTTTATTTACTaGTACAACACCATCCCTGGTAACAGAAAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: ILISKLATMFIY*YNTIPGNRKEE
Trigger: CTCTTCCTTTCTGTTACCAGGGATGGTGTTGTATCAGTAAATAAACATAGTGGCCAGTTTACTGATGAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556686.1