RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIBAN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136830

Ensembl transcript IDs: ENST00000373312.4, ENST00000373314.7, ENST00000465154.1, ENST00000468379.1, ENST00000476091.1, ENST00000484348.2

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGATGCGCCAGAGACCAGGGCTGCGGCAGCTGGGGGTCCCTGAGTaGCAGGCGCCACCACACGTCCTGTGGGTCAAGGCCCCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: EMRQRPGLRQLGVPE*QAPPHVLWVKAPPL
Trigger: CAGAGGAGGGGCCTTGACCCACAGGACGTGTGGTGGCGCCTGGCACTCAGGGACCCCCAGCTGCCGCAGCCCTGGTCTCTGGCGCATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR CCA 90 bp GGGACAAGAGGGAAGAGATGCGCCAGAGACCAGGGCTGCGGCAGCTaGGGGTCCCTGAGTGCCAGGCGCCACCACACGTCCTGTGGGTCA +
Preference number: 1 (lower is better)
Translates to: GTRGKRCARDQGCGS*GSLSARRHHTSCGS
Trigger: TGACCCACAGGACGTGTGGTGGCGCCTGGCACTCAGGGACCCCCAGCTGCCGCAGCCCTGGTCTCTGGCGCATCTCTTCCCTCTTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR TCA 90 bp CACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGCACCCATaGGGGGATGGAGGCCACAGAAGGACAGGAAGGGAGGGGCTTTCC +
Preference number: 1 (lower is better)
Translates to: HQLSPPSLQEGWQHP*GDGGHRRTGREGLS
Trigger: GGAAAGCCCCTCCCTTCCTGTCCTTCTGTGGCCTCCATCCCCTCATGGGTGCTGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR TCA 90 bp TCCCAGGAACAAGAAGCTGAGGAGGGACGACAGCCAGGCCCAGAGTaGCTCACAAGGACATCCAAAGAAGGGACTGGATTTTCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: SQEQEAEEGRQPGPE*LTRTSKEGTGFSEG
Trigger: TCCCTCTGAAAATCCAGTCCCTTCTTTGGATGTCCTTGTGAGTCACTCTGGGCCTGGCTGTCGTCCCTCCTCAGCTTCTTGTTCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGGTGGGCCCGCTCCCTaGCGGTGCCACACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKGGPAP*RCHTAL
Trigger: CAGGGCTGTGTGGCACCGCCAGGGAGCGGGCCCACC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR TCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCAGCCAGCTCCTGGGTaGGTGGGCGGGAACCCACTG +
Preference number: 2 (lower is better)
Translates to: PQATTEDLGVACRRQNPAQPAPG*VGGNPL
Trigger: CAGTGGGTTCCCGCCCACTCACCCAGGAGCTGGCTG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCCAGGAGGGCAGCAGTaGTCCCTCTCCCGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PQATTEDLGVACRRQNPAPGGQQ*SLSRSW
Trigger: CCAGGACCGGGAGAGGGAGCACTGCTGCCCTCCTGG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGGTGGGCCCGCTCCCTaGCGGTGCCACACAGCCCTG +
Preference number: 2 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQGGPAP*RCHTAL
Trigger: CAGGGCTGTGTGGCACCGCCAGGGAGCGGGCCCACC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAAGAGCTGAGCCTGCCTaGGTCCGGAAGGGAACGGCC +
Preference number: 2 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRRAEPA*VRKGTA
Trigger: GGCCGTTCCCTTCCGGACCCAGGCAGGCTCAGCTCT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCAGCTCCTGGGTGAGTaGGCGGGAACCCACTGGGCT +
Preference number: 2 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPQLLGE*AGTHWA
Trigger: AGCCCAGTGGGTTCCCGCCCACTCACCCAGGAGCTG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR TCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCTGAACCCAATAAAGTaGCTCAGGTGGGCCCGCTCC +
Preference number: 2 (lower is better)
Translates to: PQATTEDLGVACRRQNPALNPIK*LRWARS
Trigger: GGAGCGGGCCCACCTGAGTCACTTTATTGGGTTCAG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGAAGGGAACGGCCTGTaGCATGTGCAGCAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKEGNGL*HVQQSG
Trigger: CCCTGACTGCTGCACATGGCACAGGCCGTTCCCTTC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGAGAGCTGAGCCTGCCTaGGTCCGGAAGGGAACGGCC +
Preference number: 2 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQRAEPA*VRKGTA
Trigger: GGCCGTTCCCTTCCGGACCCAGGCAGGCTCAGCTCT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTCCCCTCCGCAGACCTaGACGTTCTGGGCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPSPPQT*TFWAFL
Trigger: GAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGCAGTGTCCAGCCCTTaGCACAAGCAGGAAAACCCC +
Preference number: 2 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKAVSSP*HKQENP
Trigger: GGGGTTTTCCTGCTTGTGCCAAGGGCTGGACACTGC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGCACCCATGAGGGGATaGAGGCCACAGAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRAPMRG*RPQKDR
Trigger: CCTGTCCTTCTGTGGCCTCCATCCCCTCATGGGTGC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTGGGCGGGAACCCACTaGGCTCACACCAGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPWAGTH*AHTSFH
Trigger: GTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR TCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCTGAACCCAATAAAGTaGCTCAGGTGGGCCCGCTCC +
Preference number: 2 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPLNPIK*LRWARS
Trigger: GGAGCGGGCCCACCTGAGTCACTTTATTGGGTTCAG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGAAGGGAACGGCCTGTaGCATGTGCAGCAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQEGNGL*HVQQSG
Trigger: CCCTGACTGCTGCACATGGCACAGGCCGTTCCCTTC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGCACCCATGAGGGGATaGAGGCCACAGAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQAPMRG*RPQKDR
Trigger: CCTGTCCTTCTGTGGCCTCCATCCCCTCATGGGTGC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTGGGCGGGAACCCACTaGGCTCACACCAGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQWAGTH*AHTSFH
Trigger: GTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTTCCCTCCAGAACAGTaGGGAAAGCGAGGCTCGGTC +
Preference number: 2 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQFPPEQ*GKRGSV
Trigger: GACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGAA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR CCA 72 bp GGGAAGAGATGCGCCAGAGACCAGGGCTGCGGCAGCTaGGGGTCCCTGAGTGCCAGGCGCCACCACACGTCC +
Preference number: 3 (lower is better)
Translates to: GKRCARDQGCGS*GSLSARRHHTS
Trigger: GGACGTGTGGTGGCGCCTGGCACTCAGGGACCCCCAGCTGCCGCAGCCCTGGTCTCTGGCGCATCTCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR CCA 72 bp CCCAGCCAGCTCCTGGGTGAGTGGGCGGGAACCCACTaGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: PSQLLGEWAGTH*AHTSFHLPLSR
Trigger: CCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACCCAGGAGCTGGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR GCA 72 bp CCCTCCTTCACTCAGGACACTTCCCCTCCGCAGACCTaGACGTTCTGGGCCTTTCTCATTTCACCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: PSFTQDTSPPQT*TFWAFLISPQA
Trigger: GGCCTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTCCTGAGTGAAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAAGCAGTGTCCAGCCCTaGGCACAAGCAGGAAAACCC +
Preference number: 3 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRSSVQP*AQAGKP
Trigger: GGGTTTTCCTGCTTGTGCCAAGGGCTGGACACTGCT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR TCA 72 bp CATCCTGGCTTGACCCTTGTCCCAGGAACAAGAAGCTaGGGAGGGACGACAGCCAGGCCCAGAGTGACTCAC +
Preference number: 3 (lower is better)
Translates to: HPGLTLVPGTRS*GGTTARPRVTH
Trigger: GTGAGTCACTCTGGGCCTGGCTGTCGTCCCTCCTCAGCTTCTTGTTCCTGGGACAAGGGTCAAGCCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
3UTR-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGGGAGCAAGAAAGTGTaGACTGAACCCAATAAAGTG +
Preference number: 3 (lower is better)
Translates to: SLQNSGESEARSTPNCGRGSKKV*TEPNKV
Trigger: CACTTTATTGGGTTCAGTCAACACTTTCTTGCTCCC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCGACGCCGCCGCTGTTaGCCGCGCTGCTCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKRRRRC*PRCSGG
Trigger: TCCGCCTGAGCAGCGCGGGCAACAGCGGCGGCGTCG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCAGAGCAGCTGGGCCTaGGGCAGCCCCGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSQSSWA*GSPVPS
Trigger: TGAGGGCACGGGGCTGCCGCAGGCCCAGCTGCTCTG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGGGCGGGGTGGCTGCTaGGGCTGGACACCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSGRGGC*GWTPAL
Trigger: GAGAGCAGGTGTCCAGCCCCAGCAGCCACCCCGCCC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGGGCGGGGTGGCTGCTaGGGCTGGACACCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAGRGGC*GWTPAL
Trigger: GAGAGCAGGTGTCCAGCCCCAGCAGCCACCCCGCCC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGGTGGGCCCGCTCCCTaGCGGTGCCACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRGGPAP*RCHTAL
Trigger: CAGGGCTGTGTGGCACCGCCAGGGAGCGGGCCCACC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCGCTGTTGCCCGCGCTaGTCAGGCGGACGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPRCCPR*SGGRRW
Trigger: CCAGCGGCGTCCGCCTGAGCAGCGCGGGCAACAGCG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCGGGCGTCGTCCAGGTaGGTGGACAGCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRRASSR*VDSTSP
Trigger: GGGGGACGTGCTGTCCACGCACCTGGACGACGCCCG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTGCCGCTGCCGCTCCTaGGGTTTCCCCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSCRCRS*GFPFSR
Trigger: GCGGCTGAAGGGGAAACCGCAGGAGCGGCAGCGGCA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCGCCCCCGCCGCTGTTaGTGTACTCCTCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPARPRRC*CTPRPS
Trigger: ACTGGGGCGAGGAGTACAGCAACAGCGGCGGGGGCG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTTGCGCCAGAGCAGCTaGGCCTGCGGCAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRLRQSS*ACGSPV
Trigger: CACGGGGCTGCCGCAGGCCCAGCTGCTCTGGCGCAA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCGGGGCGGCCTTAGGCTaGGGACTCTCCCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPGAALG*GLSPAG
Trigger: CCCCGCTGGGGAGAGTCCCCAGCCTAAGGCCGCCCC...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTCCTCGGTGGTGGTGTaGAGGGCGGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSSSVVV*RAGWLL
Trigger: CAGCAGCCACCCCGCCCTCCACACCACCACCGAGGA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCACTGTCCTCGGTGGTaGTGTGGAGGGCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAHCPRW*CGGRGG
Trigger: GCCACCCCGCCCTCCACACCACCACCGAGGACAGTG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGGGGGATCCCAGGCCTaGGCCCATCCTGGCTTGACC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSGGSQA*AHPGLT
Trigger: GGTCAAGCCAGGATGGGCCCAGGCCTGGGATCCCCC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGCAGGAACGGGATGCTaGTCTGCAGCAGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAAGTGC*SAAAPP
Trigger: GGGAGGCGCTGCTGCAGATCAGCATCCCGTTCCTGC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGGCCTCGGATCTCAGTaGCACCGTCCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKGLGSQ*HRPGTQ
Trigger: CTGCGTCCCCGGACGGTGTCACTGAGATCCGAGGCC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCAGCCAGCTCCTGGGTaGGTGGGCGGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRQPAPG*VGGNPL
Trigger: CAGTGGGTTCCCGCCCACTCACCCAGGAGCTGGCTG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTCCCCAGGCAACCACTaGGGACCTCGGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKSPGNH*GPRGGL
Trigger: CAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGGA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCTGGATCCACTGCCGCTaGCGCTCCTGCGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAWIHCR*RSCGFP
Trigger: GGGGAAACCGCAGGAGCGGCAGCGGCAGTGGATCCA...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGCCTGCATGGCCGGCTaGACCTGCTGCACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSACMAG*TCCTLD
Trigger: GTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCGGTCCACCCCTAACTaGGGAAGGAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPARSTPN*GRSRAR
Trigger: CCTGGCCCTGCTCCTTCCGCAGTTAGGGGTGGACCG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCGGTCCACCCCTAACTaGGGAAGGAGCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSRSTPN*GRSRAR
Trigger: CCTGGCCCTGCTCCTTCCGCAGTTAGGGGTGGACCG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCTGGGGGTCCCTGAGTaGCAGGCGCCACCACACGTC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKLGVPE*QAPPHV
Trigger: GACGTGTGGTGGCGCCTGGCACTCAGGGACCCCCAG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATTGCGCCAGAGCAGCTaGGCCTGCGGCAGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRLRQSS*ACGSPV
Trigger: CACGGGGCTGCCGCAGGCCCAGCTGCTCTGGCGCAA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCAGCTCCTGGGTGAGTaGGCGGGAACCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSQLLGE*AGTHWA
Trigger: AGCCCAGTGGGTTCCCGCCCACTCACCCAGGAGCTG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAGGGAGGCAGGCTaGGGCCGGGAGAAGGGGATA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSRREAG*GREKGI
Trigger: TATCCCCTTCTCCCGGCCCCAGCCTGCCTCCCTCCT...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCAGGGCTGCGGCAGCTaGGGGTCCCTGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPQGCGS*GSLSAR
Trigger: CCTGGCACTCAGGGACCCCCAGCTGCCGCAGCCCTG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCCATGTCAGTTCGGATaGCGGCCTGCATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAPCQFG*RPAWPA
Trigger: AGCCGGCCATGCAGGCCGTCATCCGAACTGACATGG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCATCTCGCACCTCAGTaGAGCCCTGGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSHLAPQ*SPGWWG
Trigger: TCCCCACCAGCCAGGGCTTCACTGAGGTGCGAGATG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGGCCTCGGATCTCAGTaGCACCGTCCGGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRGLGSQ*HRPGTQ
Trigger: CTGCGTCCCCGGACGGTGTCACTGAGATCCGAGGCC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTCCCCAGGCAACCACTaGGGACCTCGGGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPSPGNH*GPRGGL
Trigger: CAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGGA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCAGAGCAGCTGGGCCTaGGGCAGCCCCGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQQSSWA*GSPVPS
Trigger: TGAGGGCACGGGGCTGCCGCAGGCCCAGCTGCTCTG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCCGCGGGCCGAGCTCTaGCTTCAGCTCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQPRAEL*LQLRAQ
Trigger: CTGGGCCCTGAGCTGAAGGCAGAGCTCGGCCCGCGG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATGCCGCTGCCGCTCCTaGGGTTTCCCCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRCRCRS*GFPFSR
Trigger: GCGGCTGAAGGGGAAACCGCAGGAGCGGCAGCGGCA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGCCTGCATGGCCGGCTaGACCTGCTGCACCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRACMAG*TCCTLD
Trigger: GTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGTTCGGATGACGGCCTaGATGGCCGGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKVRMTA*MAGCTC
Trigger: GCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAAC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCCGCACGCACACCTCTaGCTTGGGGAGGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAPHAHL*LGEDEG
Trigger: GCCTTCATCCTCCCCAAGGCAGAGGTGTGCGTGCGG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAACAGCACGTCCCCCATaGCCAGGAGGTGTCGCGGCC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRTARPP*PGGVAA
Trigger: GGCCGCGACACCTCCTGGCCATGGGGGACGTGCTGT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGATGCGCTCGTCCAGTaGCACCTTGCGCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSDALVQ*HLAPEQ
Trigger: CTGCTCTGGCGCAAGGTGCCACTGGACGAGCGCATC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGATGACGGCTCGTGGTaGGACCTGCCGCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPADDGSW*DLPLIG
Trigger: GCCTATGAGCGGCAGGTCCCACCACGAGCCGTCATC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCAGAGACCACCTGCTTaGCGCGCCGTCGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAQRPPA*RAVAFP
Trigger: CGGAAAAGCGACGGCGCGCCAAGCAGGTGGTCTCTG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTCAGGCCGCAGACCTTaGGCCAGCAGGCCTCGGATC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKSGRRP*ASRPRI
Trigger: GATCCGAGGCCTGCTGGCCCAAGGTCTGCGGCCTGA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACCTGGTCGCTGGGCTTaGGGGGCCCAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRPGRWA*GAQGPQ
Trigger: CTGTGGACCTTGGGCCCCCCAAGCCCAGCGACCAGG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTCCTCGGTGGTGGTGTaGAGGGCGGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPSSVVV*RAGWLL
Trigger: CAGCAGCCACCCCGCCCTCCACACCACCACCGAGGA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGAGAGCTGAGCCTGCCTaGGTCCGGAAGGGAACGGCC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKRAEPA*VRKGTA
Trigger: GGCCGTTCCCTTCCGGACCCAGGCAGGCTCAGCTCT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGGTGGGCCCGCTCCCTaGCGGTGCCACACAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHGGPAP*RCHTAL
Trigger: CAGGGCTGTGTGGCACCGCCAGGGAGCGGGCCCACC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGAGGAGGGAGGCAGGCTaGGGCCGGGAGAAGGGGATA +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKRREAG*GREKGI
Trigger: TATCCCCTTCTCCCGGCCCCAGCCTGCCTCCCTCCT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGGGGGATCCCAGGCCTaGGCCCATCCTGGCTTGACC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRGGSQA*AHPGLT
Trigger: GGTCAAGCCAGGATGGGCCCAGGCCTGGGATCCCCC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCATCTCGCACCTCAGTaGAGCCCTGGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKHLAPQ*SPGWWG
Trigger: TCCCCACCAGCCAGGGCTTCACTGAGGTGCGAGATG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTCTGGGCTCGCTGCTTaGACACGGACGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSSGLAA*TRTCWT
Trigger: TGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGCAGGAACGGGATGCTaGTCTGCAGCAGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRAGTGC*SAAAPP
Trigger: GGGAGGCGCTGCTGCAGATCAGCATCCCGTTCCTGC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGGACGCAGGTGGTGGTaGCTCAGGGCTAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSGRRWW*LRASLK
Trigger: TTTGAGGCTAGCCCTGAGTCACCACCACCTGCGTCC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGGGCCCATCCTGGCTTaGCCCTTGTCCCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAGPILA*PLSQEQ
Trigger: TTGTTCCTGGGACAAGGGTCAAGCCAGGATGGGCCC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACCTGCGGCAGCCCCGTaGCCTCAATCTCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRPAAAP*PQSHGA
Trigger: TGCGCCATGAGATTGAGGGCACGGGGCTGCCGCAGG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCCTGCGGCAGCCCCGTaGCCTCAATCTCATGGCGCA +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPPAAAP*PQSHGA
Trigger: TGCGCCATGAGATTGAGGGCACGGGGCTGCCGCAGG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCGTCCAGTGGCACCTTaGGCCAGAGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPRPVAP*ARAAGP
Trigger: AGGCCCAGCTGCTCTGGCGCAAGGTGCCACTGGACG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTCCCCGAGAAGACGATaGGCTCGTCCAGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSSPRRR*ARPVAP
Trigger: AGGTGCCACTGGACGAGCGCATCGTCTTCTCGGGGA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCGCGGGCCGAGCTCTaGCTTCAGCTCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPRAEL*LQLRAQ
Trigger: CTGGGCCCTGAGCTGAAGGCAGAGCTCGGCCCGCGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTGGATCCACTGCCGCTaGCGCTCCTGCGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPWIHCR*RSCGFP
Trigger: GGGGAAACCGCAGGAGCGGCAGCGGCAGTGGATCCA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGATGGCCGGCTGCACCTaGTGCACCTTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRMAGCT*CTLDST
Trigger: GGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCAT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCGTTCGGATGACGGCCTaGATGGCCGGCTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPVRMTA*MAGCTC
Trigger: GCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAAC...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACGCCCCCGCCGCTGTTaGTGTACTCCTCGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMARPRRC*CTPRPS
Trigger: ACTGGGGCGAGGAGTACAGCAACAGCGGCGGGGGCG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCCAGGAGGGCAGCAGTaGTCCCTCTCCCGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQPGGQQ*SLSRSW
Trigger: CCAGGACCGGGAGAGGGAGCACTGCTGCCCTCCTGG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCTCCCCTCCGCAGACCTaGACGTTCTGGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPASPPQT*TFWAFL
Trigger: GAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGA...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACTGGGGGTCCCTGAGTaGCAGGCGCCACCACACGTC +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMALGVPE*QAPPHV
Trigger: GACGTGTGGTGGCGCCTGGCACTCAGGGACCCCCAG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGACGGCTCGTGGTaGGACCTGCCGCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKDDGSW*DLPLIG
Trigger: GCCTATGAGCGGCAGGTCCCACCACGAGCCGTCATC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGCACCTGCTGCACCTTaGACAGCACCTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSAPAAP*TAPPRS
Trigger: GCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTGCATCTTCAGGGGGTaGTACGCCAGCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKCIFRG*YASRDS
Trigger: GCTGTCCCGGCTGGCGTACCACCCCCTGAAGATGCA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCCAGGACCCGCTGGATaGACTTGCACAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSPGPAG*TCTAPP
Trigger: AGGAGGAGCTGTGCAAGTCCATCCAGCGGGTCCTGG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCGCTCCAGGACCCGCTaGATGGACTTGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKRSRTR*MDLHSS
Trigger: GGAGCTGTGCAAGTCCATCCAGCGGGTCCTGGAGCG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCGCTCCAGGACCCGCTaGATGGACTTGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRRSRTR*MDLHSS
Trigger: GGAGCTGTGCAAGTCCATCCAGCGGGTCCTGGAGCG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTCGAAGATCAGCTCCTaGAACCGGGGCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSSKISS*NRGSSD
Trigger: GTCGGAGCTGCCCCGGTTCCAGGAGCTGATCTTCGA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCAGAGACCACCTGCTTaGCGCGCCGTCGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRQRPPA*RAVAFP
Trigger: CGGAAAAGCGACGGCGCGCCAAGCAGGTGGTCTCTG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCACTGTCCTCGGTGGTaGTGTGGAGGGCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQHCPRW*CGGRGG
Trigger: GCCACCCCGCCCTCCACACCACCACCGAGGACAGTG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGCACCCATGAGGGGATaGAGGCCACAGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSAPMRG*RPQKDR
Trigger: CCTGTCCTTCTGTGGCCTCCATCCCCTCATGGGTGC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACAGCTCCTGGGTGAGTaGGCGGGAACCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRQLLGE*AGTHWA
Trigger: AGCCCAGTGGGTTCCCGCCCACTCACCCAGGAGCTG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCCACCACACGTCCTGTaGGTCAAGGCCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRPPHVL*VKAPPL
Trigger: CAGAGGAGGGGCCTTGACCCACAGGACGTGTGGTGG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCAGGGCTGCGGCAGCTaGGGGTCCCTGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHQGCGS*GSLSAR
Trigger: CCTGGCACTCAGGGACCCCCAGCTGCCGCAGCCCTG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAACTGTGTGGGGCACTTaGGGATGGGGGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMATVWGT*GWGHCP
Trigger: CGGGCAGTGCCCCCATCCTCAAGTGCCCCACACAGT...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGACTGTGTGGGGCACTTaGGGATGGGGGCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQTVWGT*GWGHCP
Trigger: CGGGCAGTGCCCCCATCCTCAAGTGCCCCACACAGT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTGCGGATGGCATCTGTaGACGCAGGGCCCTCTACCT +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKCGWHL*TQGPLP
Trigger: AGGTAGAGGGCCCTGCGTTCACAGATGCCATCCGCA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTCTGGGCTCGCTGCTTaGACACGGACGTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKSGLAA*TRTCWT
Trigger: TGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCAGCCAGCTCCTGGGTaGGTGGGCGGGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHQPAPG*VGGNPL
Trigger: CAGTGGGTTCCCGCCCACTCACCCAGGAGCTGGCTG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTTGCTGTCCTCCTGGTaGTGGAAGAGGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSLLSSW*WKRFPE
Trigger: CTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTGCCGGATGCAGTCCTaGAGCACAGCCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRCRMQS*STACHL
Trigger: CAAGTGGCAGGCTGTGCTGCAGGACTGCATCCGGCA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCTGTTGCAGTGCCGGATaGAGTCCTGCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPACCSAG*SPAAQP
Trigger: AGGCTGTGCTGCAGGACTGCATCCGGCACTGCAACA...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAAGCGCGCCTTGGCCTaGTCGTACACCATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSKRALA*SYTMWY
Trigger: GTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTT...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAATGGCCGGCTGCACCTaGTGCACCTTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRMAGCT*CTLDST
Trigger: GGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCAT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCACATCAAATCGCTGCTaGAGCCCGTCCAGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPATSNRC*SPSSRS
Trigger: GCTGCGACTGGACGGGCTGCAGCAGCGATTTGATGT...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGACACATCAAATCGCTaGTGCAGCCCGTCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPADTSNR*CSPSSR
Trigger: GCGACTGGACGGGCTGCAGCAGCGATTTGATGTGTC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTTCCCCAGCTCCTGGTaGAGGAGGGTCTCGAACGTA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSFPSSW*RRVSNV
Trigger: TACGTTCGAGACCCTCCTGCACCAGGAGCTGGGGAA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCCCGCTGGATGGACTTaGACAGCTCCTCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKPAGWT*TAPPWW
Trigger: CCACCAAGGAGGAGCTGTGCAAGTCCATCCAGCGGG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGACCACAGAGACCACCTaGTTGGCGCGCCGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKTTETT*LARRRF
Trigger: AAAGCGACGGCGCGCCAAGCAGGTGGTCTCTGTGGT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCTCAGTCTGCACCCCTaGACTGTCCTCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKLSLHP*TVLGGG
Trigger: ACCACCACCGAGGACAGTGCAGGGGTGCAGACTGAG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCAGGAGGGCAGCAGTaGTCCCTCTCCCGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPGGQQ*SLSRSW
Trigger: CCAGGACCGGGAGAGGGAGCACTGCTGCCCTCCTGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTCCCCTCCGCAGACCTaGACGTTCTGGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKSPPQT*TFWAFL
Trigger: GAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCATTACACCCCTTGCTaGCGCTCCATCCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAHYTPC*RSIPNH
Trigger: GTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAATG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACGTCGTCCAGGTGCGTaGACAGCACGTCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMARRPGA*TARPPW
Trigger: CCATGGGGGACGTGCTGTCCACGCACCTGGACGACG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS-3UTR CCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGTTGATGACGGCTCGTaGTGGGACCTGCCGCTCATA +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAVDDGS*WDLPLI
Trigger: TATGAGCGGCAGGTCCCACCACGAGCCGTCATCAAC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAACGGCGTCCGAGATCTaGATCCACTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMATASEI*IHCRCR
Trigger: GCGGCAGCGGCAGTGGATCCAGATCTCGGACGCCGT...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCCTCGAAGCGCGCCTTaGCCTGCTCGTACACCATGT +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRPRSAP*PARTPC
Trigger: ACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGCACCTGCTGCACCTTaGACAGCACCTCCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKAPAAP*TAPPRS
Trigger: GCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATGCATCTTCAGGGGGTaGTACGCCAGCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRCIFRG*YASRDS
Trigger: GCTGTCCCGGCTGGCGTACCACCCCCTGAAGATGCA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCCCTTCCCCAGCTCCTaGTGCAGGAGGGTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPPFPSS*CRRVSN
Trigger: GTTCGAGACCCTCCTGCACCAGGAGCTGGGGAAGGG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTCGAAGATCAGCTCCTaGAACCGGGGCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRSKISS*NRGSSD
Trigger: GTCGGAGCTGCCCCGGTTCCAGGAGCTGATCTTCGA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCCCACCTCCTCATCCTaGACCACAGAGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKPTSSS*TTETTC
Trigger: GCAGGTGGTCTCTGTGGTCCAGGATGAGGAGGTGGG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCTGGTCGCTGGGCTTaGGGGGCCCAAGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPGRWA*GAQGPQ
Trigger: CTGTGGACCTTGGGCCCCCCAAGCCCAGCGACCAGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGGTGGCTGCTGGGGCTaGACACCTGCTCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRGGCWG*TPALQS
Trigger: AGACTGGAGAGCAGGTGTCCAGCCCCAGCAGCCACC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACTGCACTGTCCTCGGTaGTGGTGTGGAGGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMALHCPR*WCGGRG
Trigger: ACCCCGCCCTCCACACCACCACCGAGGACAGTGCAG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAAGAGCTGAGCCTGCCTaGGTCCGGAAGGGAACGGCC +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMARAEPA*VRKGTA
Trigger: GGCCGTTCCCTTCCGGACCCAGGCAGGCTCAGCTCT...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGCACCCATGAGGGGATaGAGGCCACAGAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKAPMRG*RPQKDR
Trigger: CCTGTCCTTCTGTGGCCTCCATCCCCTCATGGGTGC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCCACCACACGTCCTGTaGGTCAAGGCCCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPPPHVL*VKAPPL
Trigger: CAGAGGAGGGGCCTTGACCCACAGGACGTGTGGTGG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTGTGGGGCACGAGGCTaGAGCGGTTTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKCGARG*SGFSTS
Trigger: AGAAGTGGAGAAACCGCTTCAGCCTCGTGCCCCACA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCAAGGATGCCAGAGGATaGGCGGGAACTGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPKDARG*AGTVWG
Trigger: GCCCCACACAGTTCCCGCTCATCCTCTGGCATCCTT...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGCAGGATGTCCTTCATaGCGGTCTGCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRAGCPS*RSAAPP
Trigger: AGGTGGTGCTGCAGACCGTCATGAAGGACATCCTGC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGCAGGATGTCCTTCATaGCGGTCTGCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKAGCPS*RSAAPP
Trigger: AGGTGGTGCTGCAGACCGTCATGAAGGACATCCTGC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCAGCCAGGCCCAGAGTaGCTCACAAGGACATCCAAA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSQPGPE*LTRTSK
Trigger: TTTGGATGTCCTTGTGAGTCACTCTGGGCCTGGCTG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACCAGGAACAAGAAGCTaGGGAGGGACGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRPGTRS*GGTTAR
Trigger: CCTGGCTGTCGTCCCTCCTCAGCTTCTTGTTCCTGG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCGTCCAGTGGCACCTTaGGCCAGAGCAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHRPVAP*ARAAGP
Trigger: AGGCCCAGCTGCTCTGGCGCAAGGTGCCACTGGACG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCGCCTGCCACTTGTCCTaGTCGGCTTCTGTCATCATG +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAACHLS*SASVIM
Trigger: CATGATGACAGAAGCCGAGCAGGACAAGTGGCAGGC...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGAAGCGCGCCTTGGCCTaGTCGTACACCATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKKRALA*SYTMWY
Trigger: GTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTTCCCCAGCTCCTGGTaGAGGAGGGTCTCGAACGTA +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRFPSSW*RRVSNV
Trigger: TACGTTCGAGACCCTCCTGCACCAGGAGCTGGGGAA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTTCTTGCTGTCCTCCTaGTGCTGGAAGAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSFLLSS*CWKRFP
Trigger: GGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTGCCGTACAGCTCCTTaGACTGTCGGTACATGCGGA +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSCRTAP*TVGTCG
Trigger: TCCGCATGTACCGACAGTCCAAGGAGCTGTACGGCA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACCTCGAAGCGCGCCTTaGCCTGCTCGTACACCATGT +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRPRSAP*PARTPC
Trigger: ACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGAGGCTCGGATCTTGCTaGCAAGGTGCTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRRLGSC*QGAPWR
Trigger: CCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCACCTCAGTGAAGCCCTaGCTGGTGGGGACCATCAGG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPTSVKP*LVGTIR
Trigger: CCTGATGGTCCCCACCAGCCAGGGCTTCACTGAGGT...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTCCCGCATGTGGATCTaGGCTCGCTGCTTGAACACG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRSRMWI*ARCLNT
Trigger: CGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCCCTTCCCCAGCTCCTaGTGCAGGAGGGTCTCGAAC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQPFPSS*CRRVSN
Trigger: GTTCGAGACCCTCCTGCACCAGGAGCTGGGGAAGGG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGCTTTTCCGAGAGGGTaGCTGACTCCGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAAFPRG*LTPGCW
Trigger: CCAGCACCCCGGAGTCAGCCACCCTCTCGGAAAAGC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGCTTTTCCGAGAGGGTaGCTGACTCCGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQAFPRG*LTPGCW
Trigger: CCAGCACCCCGGAGTCAGCCACCCTCTCGGAAAAGC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTCAGGCCGCAGACCTTaGGCCAGCAGGCCTCGGATC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHSGRRP*ASRPRI
Trigger: GATCCGAGGCCTGCTGGCCCAAGGTCTGCGGCCTGA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGGTGGCTGCTGGGGCTaGACACCTGCTCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAGGCWG*TPALQS
Trigger: AGACTGGAGAGCAGGTGTCCAGCCCCAGCAGCCACC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCTGCACTGTCCTCGGTaGTGGTGTGGAGGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHLHCPR*WCGGRG
Trigger: ACCCCGCCCTCCACACCACCACCGAGGACAGTGCAG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCAGTCAGGGACCCACTaGCCTAGAACTCAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAQSGTH*PRTQSA
Trigger: TGCAGACTGAGTTCTAGGCCAGTGGGTCCCTGACTG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGCAGTGTCCAGCCCTTaGCACAAGCAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRAVSSP*HKQENP
Trigger: GGGGTTTTCCTGCTTGTGCCAAGGGCTGGACACTGC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTCAAGGCCCCTCCTCTaGGGAGCAGGTCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQSRPLL*GAGLGH
Trigger: GTGCCCTAGACCTGCTCCCCAGAGGAGGGGCCTTGA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCATGGCGCATGCTGTTaGAGAGAGCCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKHGACC*REPRHT
Trigger: AGTATGGCGTGGCTCTCTTCAACAGCATGCGCCATG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCATTGGTCCACGGACGTaGGGATTTTGTAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPAIGPRT*GFCSLH
Trigger: GTGCAGGCTACAAAATCCTCACGTCCGTGGACCAAT...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGAAGGATGCCAGAGGATaGGCGGGAACTGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQKDARG*AGTVWG
Trigger: GCCCCACACAGTTCCCGCTCATCCTCTGGCATCCTT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATGCGGATGGCATCTGTaGACGCAGGGCCCTCTACCT +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMACGWHL*TQGPLP
Trigger: AGGTAGAGGGCCCTGCGTTCACAGATGCCATCCGCA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCATGTCAGTTCGGATaGCGGCCTGCATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPCQFG*RPAWPA
Trigger: AGCCGGCCATGCAGGCCGTCATCCGAACTGACATGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCGGTCGCTGTTGTGCATaGCCATGCTGTCCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPGRCCA*PCCPGR
Trigger: TCTACCGGGACAGCATGGTCATGCACAACAGCGACC...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGGACGCAGGTGGTGGTaGCTCAGGGCTAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQGRRWW*LRASLK
Trigger: TTTGAGGCTAGCCCTGAGTCACCACCACCTGCGTCC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACTGAACCCAATAAAGTaGCTCAGGTGGGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRLNPIK*LRWARS
Trigger: GGAGCGGGCCCACCTGAGTCACTTTATTGGGTTCAG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCCAGGAACAAGAAGCTaGGGAGGGACGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQPGTRS*GGTTAR
Trigger: CCTGGCTGTCGTCCCTCCTCAGCTTCTTGTTCCTGG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATCCCCGAGAAGACGATaGGCTCGTCCAGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMASPRRR*ARPVAP
Trigger: AGGTGCCACTGGACGAGCGCATCGTCTTCTCGGGGA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATTGCTGTCCTCCTGGTaGTGGAAGAGGTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRLLSSW*WKRFPE
Trigger: CTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGCCTGCCACTTGTCCTaGTCGGCTTCTGTCATCATG +
Preference number: 4 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKACHLS*SASVIM
Trigger: CATGATGACAGAAGCCGAGCAGGACAAGTGGCAGGC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTGTTGCAGTGCCGGATaGAGTCCTGCAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPCCSAG*SPAAQP
Trigger: AGGCTGTGCTGCAGGACTGCATCCGGCACTGCAACA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCCAGGGATTCCATTGTTaGAGTGCCGGATGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSQGFHC*SAGCSP
Trigger: AGGACTGCATCCGGCACTGCAACAATGGAATCCCTG...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGAGATCTGGATCCACTaGCGCTGCCGCTCCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHEIWIH*RCRSCG
Trigger: ACCGCAGGAGCGGCAGCGGCAGTGGATCCAGATCTC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCGCACGCACACCTCTaGCTTGGGGAGGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPHAHL*LGEDEG
Trigger: GCCTTCATCCTCCCCAAGGCAGAGGTGTGCGTGCGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATGGATCTGGGCTCGCTaGTTGAACACGGACGTGCTG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRWIWAR*LNTDVL
Trigger: CAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACCCGCTGGATGGACTTaGACAGCTCCTCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAPAGWT*TAPPWW
Trigger: CCACCAAGGAGGAGCTGTGCAAGTCCATCCAGCGGG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTTGGGGTCGCTGTTGTaGATGACCATGCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPLGSLL*MTMLSR
Trigger: CCGGGACAGCATGGTCATGCACAACAGCGACCCCAA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCTCAGTCTGCACCCCTaGACTGTCCTCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQLSLHP*TVLGGG
Trigger: ACCACCACCGAGGACAGTGCAGGGGTGCAGACTGAG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTTTTCTGCGATGTGCTaGCGCCGGGCGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHFSAMC*RRASSR
Trigger: CCTGGACGACGCCCGGCGCCAGCACATCGCAGAAAA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATGCCCGACTTTGCCGTaGTCCCTGGTAAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRCPTLP*SLVRSC
Trigger: GCAACTCCTTACCAGGGACCACGGCAAAGTCGGGCA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCAGGGCCCTCTACCTTaGAGTCCTCAGGGATTCCAT +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRQGPLP*SPQGFH
Trigger: ATGGAATCCCTGAGGACTCCAAGGTAGAGGGCCCTG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGGCCTCCAGGATGGATaGGATGTAGGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRGLQDG*DVGLDM
Trigger: CATGTCCAGCCCTACATCCCATCCATCCTGGAGGCC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATCAGGGCCTCCAGGATaGATGGGATGTAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRSGPPG*MGCRAG
Trigger: TCCAGCCCTACATCCCATCCATCCTGGAGGCCCTGA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGACCTCAGTGAAGCCCTaGCTGGTGGGGACCATCAGG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQTSVKP*LVGTIR
Trigger: CCTGATGGTCCCCACCAGCCAGGGCTTCACTGAGGT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCAGTCAGGGACCCACTaGCCTAGAACTCAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRQSGTH*PRTQSA
Trigger: TGCAGACTGAGTTCTAGGCCAGTGGGTCCCTGACTG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTCAAGGCCCCTCCTCTaGGGAGCAGGTCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHSRPLL*GAGLGH
Trigger: GTGCCCTAGACCTGCTCCCCAGAGGAGGGGCCTTGA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACATGGCGCATGCTGTTaGAGAGAGCCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRHGACC*REPRHT
Trigger: AGTATGGCGTGGCTCTCTTCAACAGCATGCGCCATG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGGTCGCTGTTGTGCATaGCCATGCTGTCCCGGTAGA +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAGRCCA*PCCPGR
Trigger: TCTACCGGGACAGCATGGTCATGCACAACAGCGACC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCTGAACCCAATAAAGTaGCTCAGGTGGGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQLNPIK*LRWARS
Trigger: GGAGCGGGCCCACCTGAGTCACTTTATTGGGTTCAG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGGTTTCTCCACTTCTTaGTGTCCTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRGFSTS*CPPGAG
Trigger: TCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTGCCGGATGCAGTCCTaGAGCACAGCCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHCRMQS*STACHL
Trigger: CAAGTGGCAGGCTGTGCTGCAGGACTGCATCCGGCA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGATTCCATTGTTGCAGTaGCGGATGCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRIPLLQ*RMQSCS
Trigger: GCTGCAGGACTGCATCCGGCACTGCAACAATGGAAT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGACACATCAAATCGCTaGTGCAGCCCGTCCAGTCGC +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMADTSNR*CSPSSR
Trigger: GCGACTGGACGGGCTGCAGCAGCGATTTGATGTGTC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTGGATCTGGGCTCGCTaGTTGAACACGGACGTGCTG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQWIWAR*LNTDVL
Trigger: CAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATCCTTCATGACGGTCTaGAGCACCACCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRSFMTV*STTSSY
Trigger: GTACGAGGAGGTGGTGCTGCAGACCGTCATGAAGGA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTCCTTCATGACGGTCTaGAGCACCACCTCCTCGTAC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPSFMTV*STTSSY
Trigger: GTACGAGGAGGTGGTGCTGCAGACCGTCATGAAGGA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCGCCTCCTTCACAGCCTaGAGGATGTCCTTCATGACG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPASFTA*RMSFMT
Trigger: CGTCATGAAGGACATCCTGCAGGCTGTGAAGGAGGC...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGAAGGGAACGGCCTGTaGCATGTGCAGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHEGNGL*HVQQSG
Trigger: CCCTGACTGCTGCACATGGCACAGGCCGTTCCCTTC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCATTACACCCCTTGCTaGCGCTCCATCCCCAACCAC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQHYTPC*RSIPNH
Trigger: GTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAATG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACTGTCCTCCTGGTGCTaGAAGAGGTTCCCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMALSSWC*KRFPEK
Trigger: CTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCATGAGCTCCAGGTATTaGTCCACGGACGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSMSSRY*STDVRI
Trigger: AATCCTCACGTCCGTGGACCAATACCTGGAGCTCAT...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATGCCCGACTTTGCCGTaGTCCCTGGTAAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMACPTLP*SLVRSC
Trigger: GCAACTCCTTACCAGGGACCACGGCAAAGTCGGGCA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACAGGGCCCTCTACCTTaGAGTCCTCAGGGATTCCAT +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRQGPLP*SPQGFH
Trigger: ATGGAATCCCTGAGGACTCCAAGGTAGAGGGCCCTG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAAGGCTCGGATCTTGCTaGCAAGGTGCTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMARLGSC*QGAPWR
Trigger: CCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCT...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGGCCTCCAGGATGGATaGGATGTAGGGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQGLQDG*DVGLDM
Trigger: CATGTCCAGCCCTACATCCCATCCATCCTGGAGGCC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATCAGGGCCTCCAGGATaGATGGGATGTAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMASGPPG*MGCRAG
Trigger: TCCAGCCCTACATCCCATCCATCCTGGAGGCCCTGA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAATTTGCTCCCGCATGTaGATCTGGGCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRICSRM*IWARCL
Trigger: CAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAAT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCAGGACCCGCTGGATaGACTTGCACAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPGPAG*TCTAPP
Trigger: AGGAGGAGCTGTGCAAGTCCATCCAGCGGGTCCTGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCCCACCTCCTCATCCTaGACCACAGAGACCACCTGC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHPTSSS*TTETTC
Trigger: GCAGGTGGTCTCTGTGGTCCAGGATGAGGAGGTGGG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTGGGCGGGAACCCACTaGGCTCACACCAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHWAGTH*AHTSFH
Trigger: GTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCTGAGGACCTCGGGGTaGCCTGTAGAAGACAGAACC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQLRTSG*PVEDRT
Trigger: GGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCATTGGTCCACGGACGTaGGGATTTTGTAGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPIGPRT*GFCSLH
Trigger: GTGCAGGCTACAAAATCCTCACGTCCGTGGACCAAT...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGTAAGGAGTTGCCAATaGGCTCCAGGTATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRVRSCQ*APGIGP
Trigger: TGGACCAATACCTGGAGCTCATTGGCAACTCCTTAC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTGTTTTCCACCAGGATaGACCTGGCAAAGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRCFPPG*TWQSPR
Trigger: TCGAGGACTTTGCCAGGTTCATCCTGGTGGAAAACA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGAATATCAGGGAGGGATaGTGGGAACCCCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRNIREG*WEPLKR
Trigger: CCTTTTGAGGGGTTCCCATCATCCCTCCCTGATATT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCATTCCATTGTTGCAGTaGCGGATGCAGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPIPLLQ*RMQSCS
Trigger: GCTGCAGGACTGCATCCGGCACTGCAACAATGGAAT...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCTCTTCCGCACAGAGCTaGTGTCGTAGTCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: PQATTEDLGVACRRQNPASSAQS*CRSRIS
Trigger: AGAAATACGACTACGACAGCAGCTCTGTGCGGAAGA...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTCTTCCGCACAGAGCTaGTGTCGTAGTCGTATTTCT +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSSSAQS*CRSRIS
Trigger: AGAAATACGACTACGACAGCAGCTCTGTGCGGAAGA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGTTGATGACGGCTCGTaGTGGGACCTGCCGCTCATA +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHVDDGS*WDLPLI
Trigger: TATGAGCGGCAGGTCCCACCACGAGCCGTCATCAAC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATGCCGTACAGCTCCTTaGACTGTCGGTACATGCGGA +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMACRTAP*TVGTCG
Trigger: TCCGCATGTACCGACAGTCCAAGGAGCTGTACGGCA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTGCTCGTACACCATGTaGTACACGGCGTCCGAGATC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQCSYTM*YTASEI
Trigger: GATCTCGGACGCCGTGTACCACATGGTGTACGAGCA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTCCCGCATGTGGATCTaGGCTCGCTGCTTGAACACG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHSRMWI*ARCLNT
Trigger: CGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTTCCCTCCAGAACAGTaGGGAAAGCGAGGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHFPPEQ*GKRGSV
Trigger: GACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGAA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACAGACCTGCACGTTCTaGGCCTTTCTCATTTCACCC +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRQTCTF*AFLISP
Trigger: GGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCTGAGGACCTCGGGGTaGCCTGTAGAAGACAGAACC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHLRTSG*PVEDRT
Trigger: GGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATGTTTTCCACCAGGATaGACCTGGCAAAGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRCFPPG*TWQSPR
Trigger: TCGAGGACTTTGCCAGGTTCATCCTGGTGGAAAACA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCAGCCAGGCCCAGAGTaGCTCACAAGGACATCCAAA +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHQPGPE*LTRTSK
Trigger: TTTGGATGTCCTTGTGAGTCACTCTGGGCCTGGCTG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAAATATCAGGGAGGGATaGTGGGAACCCCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRNIREG*WEPLKR
Trigger: CCTTTTGAGGGGTTCCCATCATCCCTCCCTGATATT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCGGCTTCTGTCATCATaGAGAAGTAGTAGTGACGCG +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPRLLSS*RSSSDA
Trigger: CGCGTCACTACTACTTCTGCATGATGACAGAAGCCG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCAGGGATTCCATTGTTaGAGTGCCGGATGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQQGFHC*SAGCSP
Trigger: AGGACTGCATCCGGCACTGCAACAATGGAATCCCTG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGCCTCCTTCACAGCCTaGAGGATGTCCTTCATGACG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHASFTA*RMSFMT
Trigger: CGTCATGAAGGACATCCTGCAGGCTGTGAAGGAGGC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTTCTTGCTGTCCTCCTaGTGCTGGAAGAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHFLLSS*CWKRFP
Trigger: GGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAATGAGCTCCAGGTATTaGTCCACGGACGTGAGGATT +
Preference number: 4 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRMSSRY*STDVRI
Trigger: AATCCTCACGTCCGTGGACCAATACCTGGAGCTCAT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTGCTCGTACACCATGTaGTACACGGCGTCCGAGATC +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHCSYTM*YTASEI
Trigger: GATCTCGGACGCCGTGTACCACATGGTGTACGAGCA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATATTTGCTCCCGCATGTaGATCTGGGCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHICSRM*IWARCL
Trigger: CAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAAT...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCAGACCTGCACGTTCTaGGCCTTTCTCATTTCACCC +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQQTCTF*AFLISP
Trigger: GGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR TCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGTAAGGAGTTGCCAATaGGCTCCAGGTATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAVRSCQ*APGIGP
Trigger: TGGACCAATACCTGGAGCTCATTGGCAACTCCTTAC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGGTTTCTCCACTTCTTaGTGTCCTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHGFSTS*CPPGAG
Trigger: TCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGAGGATTTTGTAGCCTaGACTGTTGATGACGGCTCG +
Preference number: 4 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAEDFVA*TVDDGS
Trigger: CGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGATCTTGCTGGCAAGGTaGTCCTTGGAGGTGATAATT +
Preference number: 4 (lower is better)
Translates to: SLQNSGESEARSTPNCGRILLAR*SLEVII
Trigger: AATTATCACCTCCAAGGAGCACCTTGCCAGCAAGAT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCTTGGAGGTGATAATTTaGTCCATGTCAGTTCGGATG +
Preference number: 4 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSLEVII*SMSVRM
Trigger: CATCCGAACTGACATGGACCAAATTATCACCTCCAA...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGAGGATTTTGTAGCCTaGACTGTTGATGACGGCTCG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHEDFVA*TVDDGS
Trigger: CGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATCGGCTTCTGTCATCATaGAGAAGTAGTAGTGACGCG +
Preference number: 4 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHRLLSS*RSSSDA
Trigger: CGCGTCACTACTACTTCTGCATGATGACAGAAGCCG...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR GCA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCATCTTGCTGGCAAGGTaGTCCTTGGAGGTGATAATT +
Preference number: 4 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPILLAR*SLEVII
Trigger: AATTATCACCTCCAAGGAGCACCTTGCCAGCAAGAT...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CCA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTTGGAGGTGATAATTTaGTCCATGTCAGTTCGGATG +
Preference number: 4 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQLEVII*SMSVRM
Trigger: CATCCGAACTGACATGGACCAAATTATCACCTCCAA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp TGGCCAGGAGGTGTCGCGGCCCGATCCGGCCGACGCCGCCGCTGTTaGCCGCGCTGCTCAGGCGGACGCCGCTGGCGCCATGGAGCCCGG +
Preference number: 5 (lower is better)
Translates to: WPGGVAARSGRRRRC*PRCSGGRRWRHGAR
Trigger: CCGGGCTCCATGGCGCCAGCGGCGTCCGCCTGAGCAGCGCGGGCAACAGCGGCGGCGTCGGCCGGATCGGGCCGCGACACCTCCTGGCCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS CCA 90 bp GCTGGCGCCGGGCGTCGTCCAGGTGCGTGGACAGCACGTCCCCCATaGCCAGGAGGTGTCGCGGCCCGATCCGGCCGACGCCGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: AGAGRRPGAWTARPP*PGGVAARSGRRRRC
Trigger: ACAGCGGCGGCGTCGGCCGGATCGGGCCGCGACACCTCCTGGCCATGGGGGACGTGCTGTCCACGCACCTGGACGACGCCCGGCGCCAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000468379.1
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCCGCCCCCGCCGCTGTaGCTGTACTCCTCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKPPPPL*LYSSPQ
Trigger: CTGGGGCGAGGAGTACAGCAACAGCGGCGGGGGCGG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp TGCAGCAGTCAGGGACCCACTGGCCTAGAACTCAGTCTGCACCCCTaGACTGTCCTCGGTGGTGGTGTGGAGGGCGGGGTGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CSSQGPTGLELSLHP*TVLGGGVEGGVAAG
Trigger: CCCAGCAGCCACCCCGCCCTCCACACCACCACCGAGGACAGTGCAGGGGTGCAGACTGAGTTCTAGGCCAGTGGGTCCCTGACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACCGCCCCCGCCGCTGTaGCTGTACTCCTCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRPPPPL*LYSSPQ
Trigger: CTGGGGCGAGGAGTACAGCAACAGCGGCGGGGGCGG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp TGGTCCATGTCAGTTCGGATGACGGCCTGCATGGCCGGCTGCACCTaGTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: WSMSVRMTACMAGCT*CTLDSTSSKRALAC
Trigger: GCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 90 bp TGCTGGGGCTGGACACCTGCTCTCCAGTCTCCTGGTCGCTGGGCTTaGGGGGCCCAAGGTCCACAGCCTTTCCAGGCAGGAGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: CWGWTPALQSPGRWA*GAQGPQPFQAGDAG
Trigger: TCCAGCATCTCCTGCCTGGAAAGGCTGTGGACCTTGGGCCCCCCAAGCCCAGCGACCAGGAGACTGGAGAGCAGGTGTCCAGCCCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTCGTCCAGTGGCACCTaGCGCCAGAGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRSSSGT*RQSSWA
Trigger: GGCCCAGCTGCTCTGGCGCAAGGTGCCACTGGACGA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATCGTCCAGTGGCACCTaGCGCCAGAGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRSSSGT*RQSSWA
Trigger: GGCCCAGCTGCTCTGGCGCAAGGTGCCACTGGACGA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCCGGGGCAGCTCCGACTaGCAGGTAGGGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPRGSSD*QVGASF
Trigger: GAAGCTGGCCCCTACCTGCAAGTCGGAGCTGCCCCG...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCACAGAGACCACCTGCTaGGCGCGCCGTCGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PQATTEDLGVACRRQNPATETTC*ARRRFS
Trigger: GGAAAAGCGACGGCGCGCCAAGCAGGTGGTCTCTGT...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 90 bp GCTGCACCTGCTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTTaGCCTGCTCGTACACCATGTGGTACACGGCGTCCGAGATCTGGA +
Preference number: 5 (lower is better)
Translates to: AAPAAPWTAPPRSAP*PARTPCGTRRPRSG
Trigger: TCCAGATCTCGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCGGGCACTGCCCGACTTaGCCGTGGTCCCTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPGHCPT*PWSLVR
Trigger: CCTTACCAGGGACCACGGCAAAGTCGGGCAGTGCCC...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCGTGCCGTACAGCTCCTaGGACTGTCGGTACATGCGG +
Preference number: 5 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSVPYSS*DCRYMR
Trigger: CCGCATGTACCGACAGTCCAAGGAGCTGTACGGCAC...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCTGCACCTGCTGCACCTaGGACAGCACCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: PQATTEDLGVACRRQNPACTCCT*DSTSSK
Trigger: CTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCA...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGACGCACACCTCTGCCTaGGGGAGGATGAAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKTHTSA*GRMKAR
Trigger: CCGAGCCTTCATCCTCCCCAAGGCAGAGGTGTGCGT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGACGCACACCTCTGCCTaGGGGAGGATGAAGGCTCGG +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRTHTSA*GRMKAR
Trigger: CCGAGCCTTCATCCTCCCCAAGGCAGAGGTGTGCGT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCATCTGGGCTCGCTGCTaGAACACGGACGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PQATTEDLGVACRRQNPAIWARC*NTDVLD
Trigger: GTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGAT...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCGGGGCAGCTCCGACTaGCAGGTAGGGGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQRGSSD*QVGASF
Trigger: GAAGCTGGCCCCTACCTGCAAGTCGGAGCTGCCCCG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACTCAGGCCGCAGACCTaGGGCCAGCAGGCCTCGGAT +
Preference number: 5 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMALRPQT*GQQASD
Trigger: ATCCGAGGCCTGCTGGCCCAAGGTCTGCGGCCTGAG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCTCAGGCCGCAGACCTaGGGCCAGCAGGCCTCGGAT +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQLRPQT*GQQASD
Trigger: ATCCGAGGCCTGCTGGCCCAAGGTCTGCGGCCTGAG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp ACCTGCTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTTGGCCTaGTCGTACACCATGTGGTACACGGCGTCCGAGATCTGGATCCAC +
Preference number: 5 (lower is better)
Translates to: TCCTLDSTSSKRALA*SYTMWYTASEIWIH
Trigger: GTGGATCCAGATCTCGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 90 bp AGTGAAGCCCTGGCTGGTGGGGACCATCAGGGCCTCCAGGATGGATaGGATGTAGGGCTGGACATGGTTCCGCACGCACACCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SEALAGGDHQGLQDG*DVGLDMVPHAHLCL
Trigger: AAGGCAGAGGTGTGCGTGCGGAACCATGTCCAGCCCTACATCCCATCCATCCTGGAGGCCCTGATGGTCCCCACCAGCCAGGGCTTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000465154.1
CDS CCA 90 bp GCCACCCCTCCCCTGGCCAGCTCCAGATGCCTGTGCAGGGCATTGTaGCCTGGGATGGGTGCTCCTTTACCTGGTAAGGAGTTGCCAATG +
Preference number: 5 (lower is better)
Translates to: ATPPLASSRCLCRAL*PGMGAPLPGKELPM
Trigger: CATTGGCAACTCCTTACCAGGTAAAGGAGCACCCATCCCAGGCCACAATGCCCTGCACAGGCATCTGGAGCTGGCCAGGGGAGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476091.1
CDS-3UTR CAA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGGGCACTGCCCGACTTaGCCGTGGTCCCTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAGHCPT*PWSLVR
Trigger: CCTTACCAGGGACCACGGCAAAGTCGGGCAGTGCCC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGAGCACAGCCTGCCACTaGTCCTGCTCGGCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRSTACH*SCSASV
Trigger: GACAGAAGCCGAGCAGGACAAGTGGCAGGCTGTGCT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGATCCTCGAAGCGCGCCTaGGCCTGCTCGTACACCATG +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRSSKRA*ACSYTM
Trigger: CATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGA...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCATGTACTCGCCCAGCTaGTCAATGCCGCCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSMYSPS*SMPPSL
Trigger: CAACGAGGGCGGCATTGACAAGCTGGGCGAGTACAT...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGATCTGGGCTCGCTGCTaGAACACGGACGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKIWARC*NTDVLD
Trigger: GTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGAT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GGTGAGTGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGCAGTGTCCAGCCCTaGGCACAAGCAGGAAAACCC +
Preference number: 5 (lower is better)
Translates to: GEWAGTHWAHTSFHLPLSSSVQP*AQAGKP
Trigger: GGGTTTTCCTGCTTGTGCCAAGGGCTGGACACTGCT...GGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCACTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGTGGGCCCATCCTGGCTaGACCCTTGTCCCAGGAACA +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRWAHPG*TLVPGT
Trigger: TGTTCCTGGGACAAGGGTCAAGCCAGGATGGGCCCA...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp GGCACGAGGCTGAAGCGGTTTCTCCACTTCTTGCTGTCCTCCTGGTaGTGGAAGAGGTTCCCCGAGAAGACGATGCGCTCGTCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GTRLKRFLHFLLSSW*WKRFPEKTMRSSSG
Trigger: GCCACTGGACGAGCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCTCGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS-3UTR CAA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCTCAGGGATTCCATTGTaGCAGTGCCGGATGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PQATTEDLGVACRRQNPASGIPL*QCRMQS
Trigger: GGACTGCATCCGGCACTGCAACAATGGAATCCCTGA...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTCCTCGAAGCGCGCCTaGGCCTGCTCGTACACCATG +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQSSKRA*ACSYTM
Trigger: CATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTGCACCTGCTGCACCTaGGACAGCACCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPCTCCT*DSTSSK
Trigger: CTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGATGTACTCGCCCAGCTaGTCAATGCCGCCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKMYSPS*SMPPSL
Trigger: CAACGAGGGCGGCATTGACAAGCTGGGCGAGTACAT...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAGTAGGGGCCAGCTTCTaGAGCAGGAACGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRVGASF*SRNGML
Trigger: CAGCATCCCGTTCCTGCTCAAGAAGCTGGCCCCTAC...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGACAGAGACCACCTGCTaGGCGCGCCGTCGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQTETTC*ARRRFS
Trigger: GGAAAAGCGACGGCGCGCCAAGCAGGTGGTCTCTGT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGTCAGAGGGAGGTGACTaGGTGACTGAGAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKSEGGD*VTERQQ
Trigger: CTGCTGCCTCTCAGTCACCAAGTCACCTCCCTCTGA...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp ATAATTTGGTCCATGTCAGTTCGGATGACGGCCTGCATGGCCGGCTaGACCTGCTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTTG +
Preference number: 5 (lower is better)
Translates to: IIWSMSVRMTACMAG*TCCTLDSTSSKRAL
Trigger: CAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp CTAAAGGCTGGTGGCCGGGAGCTAATGTTCCCTCTTTCCTCAAACTaGAGGCCCCACGAGGACTCCAACAGCCCTGGCCTCACAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LKAGGRELMFPLSSN*RPHEDSNSPGLTAS
Trigger: AGAGGCTGTGAGGCCAGGGCTGTTGGAGTCCTCGTGGGGCCTGCAGTTTGAGGAAAGAGGGAACATTAGCTCCCGGCCACCAGCCTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465154.1
CDS CCA 90 bp ACGAGGCTGAAGCGGTTTCTCCACTTCTTGCTGTCCTCCTGGTGCTaGAAGAGGTTCCCCGAGAAGACGATGCGCTCGTCCAGTGGCACC +
Preference number: 5 (lower is better)
Translates to: TRLKRFLHFLLSSWC*KRFPEKTMRSSSGT
Trigger: GGTGCCACTGGACGAGCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS CCA 90 bp TGGGGCACGAGGCTGAAGCGGTTTCTCCACTTCTTGCTGTCCTCCTaGTGCTGGAAGAGGTTCCCCGAGAAGACGATGCGCTCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: WGTRLKRFLHFLLSS*CWKRFPEKTMRSSS
Trigger: ACTGGACGAGCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCTCGTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGACGGTTTCTCCACTTCTaGCTGTCCTCCTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRRFLHF*LSSWCW
Trigger: CCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCG...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGAGCACAGCCTGCCACTaGTCCTGCTCGGCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQSTACH*SCSASV
Trigger: GACAGAAGCCGAGCAGGACAAGTGGCAGGCTGTGCT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCAGCAGGGCCCTCTACCTaGGAGTCCTCAGGGATTCCA +
Preference number: 5 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMAAGPST*ESSGIP
Trigger: TGGAATCCCTGAGGACTCCAAGGTAGAGGGCCCTGC...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGATGAAGGCTCGGATCTaGCTGGCAAGGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRMKARI*LARCSL
Trigger: CAAGGAGCACCTTGCCAGCAAGATCCGAGCCTTCAT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGTAGGGGCCAGCTTCTaGAGCAGGAACGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQVGASF*SRNGML
Trigger: CAGCATCCCGTTCCTGCTCAAGAAGCTGGCCCCTAC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCAGGTTGGGGTCGCTGTaGTGCATGACCATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPRLGSL*CMTMLS
Trigger: GGACAGCATGGTCATGCACAACAGCGACCCCAACCT...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAAGGTTGGGGTCGCTGTaGTGCATGACCATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRRLGSL*CMTMLS
Trigger: GGACAGCATGGTCATGCACAACAGCGACCCCAACCT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTGGGCCCATCCTGGCTaGACCCTTGTCCCAGGAACA +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQWAHPG*TLVPGT
Trigger: TGTTCCTGGGACAAGGGTCAAGCCAGGATGGGCCCA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS TCA 90 bp GGGCCTGCGGCAGCCCCGTGCCCTCAATCTCATGGCGCATGCTGTTaGAGAGAGCCACGCCATACTGGTCTTCATAGAACTGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: GPAAAPCPQSHGACC*REPRHTGLHRTGGT
Trigger: AGTTCCTCCAGTTCTATGAAGACCAGTATGGCGTGGCTCTCTTCAACAGCATGCGCCATGAGATTGAGGGCACGGGGCTGCCGCAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS TCA 90 bp CGGCATTGTCCATTTGCTCCCGCATGTGGATCTGGGCTCGCTGCTTaGACACGGACGTGCTGGACACATCAAATCGCTGCTGCAGCCCGT +
Preference number: 5 (lower is better)
Translates to: RHCPFAPACGSGLAA*TRTCWTHQIAAAAR
Trigger: ACGGGCTGCAGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGGACAATGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp TCCTTGGAGGTGATAATTTGGTCCATGTCAGTTCGGATGACGGCCTaGATGGCCGGCTGCACCTGCTGCACCTTGGACAGCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SLEVIIWSMSVRMTA*MAGCTCCTLDSTSS
Trigger: CGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTGTAGAAGACAGAACCCAGCCCCATTACACCCCTTGCTGCCGCTCCATCCCCTCATGGCGCATGCTGTaGAAGAGAGCCACGCCATAC +
Preference number: 5 (lower is better)
Translates to: PVEDRTQPHYTPCCRSIPSWRML*KRATPY
Trigger: GTATGGCGTGGCTCTCTTCAACAGCATGCGCCATGA...GGGGATGGAGCGGCAGCAAGGGGTGTAATGGGGCTGGGTTCTGTCTTCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGCGGTTTCTCCACTTCTaGCTGTCCTCCTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQRFLHF*LSSWCW
Trigger: CCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCG...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGGTCCCTGGTAAGGAGTaGCCAATGAGCTCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRVPGKE*PMSSRY
Trigger: ATACCTGGAGCTCATTGGCAACTCCTTACCAGGGAC...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGCTGGCAAGGTGCTCCTaGGAGGTGATAATTTGGTCC +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKLARCS*EVIIWS
Trigger: GGACCAAATTATCACCTCCAAGGAGCACCTTGCCAG...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 90 bp AAGGCTCGGATCTTGCTGGCAAGGTGCTCCTTGGAGGTGATAATTTaGTCCATGTCAGTTCGGATGACGGCCTGCATGGCCGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: KARILLARCSLEVII*SMSVRMTACMAGCT
Trigger: GGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAAATGAGCTCCAGGTATaGGTCCACGGACGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRNELQV*VHGRED
Trigger: ATCCTCACGTCCGTGGACCAATACCTGGAGCTCATT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATCAGGGATTCCATTGTaGCAGTGCCGGATGCAGTCC +
Preference number: 5 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMASGIPL*QCRMQS
Trigger: GGACTGCATCCGGCACTGCAACAATGGAATCCCTGA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTCCTCAGGGATTCCATaGTTGCAGTGCCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQSSGIP*LQCRMQ
Trigger: CTGCATCCGGCACTGCAACAATGGAATCCCTGAGGA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGAACGTATACACGGCATaGTCCATTTGCTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRNVYTA*SICSRM
Trigger: CATGCGGGAGCAAATGGACAATGCCGTGTATACGTT...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATAGCAGTGTCCAGCCCTaGGCACAAGCAGGAAAACCC +
Preference number: 5 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHSSVQP*AQAGKP
Trigger: GGGTTTTCCTGCTTGTGCCAAGGGCTGGACACTGCT...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATTCAGAGGGAGGTGACTaGGTGACTGAGAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHSEGGD*VTERQQ
Trigger: CTGCTGCCTCTCAGTCACCAAGTCACCTCCCTCTGA...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS TCA 90 bp TGCCGTACAGCTCCTTGGACTGTCGGTACATGCGGATGGCATCTGTaGACGCAGGGCCCTCTACCTTGGAGTCCTCAGGGATTCCATTGT +
Preference number: 5 (lower is better)
Translates to: CRTAPWTVGTCGWHL*TQGPLPWSPQGFHC
Trigger: ACAATGGAATCCCTGAGGACTCCAAGGTAGAGGGCCCTGCGTTCACAGATGCCATCCGCATGTACCGACAGTCCAAGGAGCTGTACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 90 bp AATGAGCTCCAGGTATTGGTCCACGGACGTGAGGATTTTGTAGCCTaGACTGTTGATGACGGCTCGTGGTGGGACCTGCCGCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: NELQVLVHGREDFVA*TVDDGSWWDLPLIG
Trigger: GCCTATGAGCGGCAGGTCCCACCACGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTCACGTCCGTGGACCAATACCTGGAGCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000476091.1
CDS GCA 90 bp TACACGGCATTGTCCATTTGCTCCCGCATGTGGATCTGGGCTCGCTaGTTGAACACGGACGTGCTGGACACATCAAATCGCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: YTALSICSRMWIWAR*LNTDVLDTSNRCCS
Trigger: GCTGCAGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGGACAATGCCGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 90 bp CACGGACGTGAGGATTTTGTAGCCTGCACTGTTGATGACGGCTCGTaGTGGGACCTGCCGCTCATAGGCCGCTTTGTTTTCGTAGAGCAC +
Preference number: 5 (lower is better)
Translates to: HGREDFVACTVDDGS*WDLPLIGRFVFVEH
Trigger: GTGCTCTACGAAAACAAAGCGGCCTATGAGCGGCAGGTCCCACCACGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTCACGTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000476091.1
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGAATGAGCTCCAGGTATaGGTCCACGGACGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQNELQV*VHGRED
Trigger: ATCCTCACGTCCGTGGACCAATACCTGGAGCTCATT...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGGTCCCTGGTAAGGAGTaGCCAATGAGCTCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQVPGKE*PMSSRY
Trigger: ATACCTGGAGCTCATTGGCAACTCCTTACCAGGGAC...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCCCAGGCAACCACTGAGGACCTCGGGGTGGCCTGTAGAAGACAGAACCCAGCCCTTGGAGGTGATAATTaGGTCCATGTCAGTTCGGAT +
Preference number: 5 (lower is better)
Translates to: PQATTEDLGVACRRQNPALGGDN*VHVSSD
Trigger: ATCCGAACTGACATGGACCAAATTATCACCTCCAAG...GGCTGGGTTCTGTCTTCTACAGGCCACCCCGAGGTCCTCAGTGGTTGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCACTGGCAAGGTGCTCCTaGGAGGTGATAATTTGGTCC +
Preference number: 5 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMALARCS*EVIIWS
Trigger: GGACCAAATTATCACCTCCAAGGAGCACCTTGCCAG...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATATGAAGGCTCGGATCTaGCTGGCAAGGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHMKARI*LARCSL
Trigger: CAAGGAGCACCTTGCCAGCAAGATCCGAGCCTTCAT...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGATGGCATCAATGCCGCCCTCGTaGATGACGTTCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: EPTGLTPAFTSLSPGRMASMPPS*MTFRFM
Trigger: CATGAACCTGAACGTCATCAACGAGGGCGGCATTGA...TGCCATCCTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp GACACTTCCCCTCCGCAGACCTGCACGTTCTGGGCCTTTCTCATTTCACCCCAGTCAATGCCGCCCTCGTaGATGACGTTCAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: DTSPPQTCTFWAFLISPQSMPPS*MTFRFM
Trigger: CATGAACCTGAACGTCATCAACGAGGGCGGCATTGA...CTGGGGTGAAATGAGAAAGGCCCAGAACGTGCAGGTCTGCGGAGGGGAAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp ATTACACCCCTTGCTGCCGCTCCATCCCCAACCACCAGAGGGACAGGGACCAGAAACGTATACACGGCATaGTCCATTTGCTCCCGCATG +
Preference number: 5 (lower is better)
Translates to: ITPLAAAPSPTTRGTGTRNVYTA*SICSRM
Trigger: CATGCGGGAGCAAATGGACAATGCCGTGTATACGTT...TCTGGTCCCTGTCCCTCTGGTGGTTGGGGATGGAGCGGCAGCAAGGGGTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS TCA 90 bp CTTTGTTTTCGTAGAGCACCAGCCCGTAGTTGTGGGGCACGAGGCTaGAGCGGTTTCTCCACTTCTTGCTGTCCTCCTGGTGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LCFRRAPARSCGARG*SGFSTSCCPPGAGR
Trigger: TCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCTCGTGCCCCACAACTACGGGCTGGTGCTCTACGAAAACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS-3UTR CAA 90 bp TCCCTCCAGAACAGTGGGGAAAGCGAGGCTCGGTCCACCCCTAACTGCGGAAGGCTTGGAGGTGATAATTaGGTCCATGTCAGTTCGGAT +
Preference number: 5 (lower is better)
Translates to: SLQNSGESEARSTPNCGRLGGDN*VHVSSD
Trigger: ATCCGAACTGACATGGACCAAATTATCACCTCCAAG...CCTTCCGCAGTTAGGGGTGGACCGAGCCTCGCTTTCCCCACTGTTCTGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS-3UTR CAA 90 bp TGGGCGGGAACCCACTGGGCTCACACCAGCTTTCACCTCCCTCTCTCCAGGAAGGGGAGCAAGAAAGTGTaGACTGAACCCAATAAAGTG +
Preference number: 5 (lower is better)
Translates to: WAGTHWAHTSFHLPLSRKGSKKV*TEPNKV
Trigger: CACTTTATTGGGTTCAGTCAACACTTTCTTGCTCCC...CTTCCTGGAGAGAGGGAGGTGAAAGCTGGTGTGAGCCCAGTGGGTTCCCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 90 bp CGAAAGGCAAACAATGAGGTCTCCATCCACAGCTCTAAGCCTAGTTaGTCTCTCCGCAAACATGGGGCTGAAAGCAATGGGCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RKANNEVSIHSSKPS*SLRKHGAESNGLRA
Trigger: GGCCCTGAGCCCATTGCTTTCAGCCCCATGTTTGCGGAGAGACCAACTAGGCTTAGAGCTGTGGATGGAGACCTCATTGTTTGCCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476091.1
CDS-3UTR CAA 90 bp CCTCAGGCTCCCCATAACCCTCACTCAGCCATCTCACTCACTCACTCCCAGCATGGGAGCAAGAAAGTGTaGACTGAACCCAATAAAGTG +
Preference number: 5 (lower is better)
Translates to: PQAPHNPHSAISLTHSQHGSKKV*TEPNKV
Trigger: CACTTTATTGGGTTCAGTCAACACTTTCTTGCTCCC...ATGCTGGGAGTGAGTGAGTGAGATGGCTGAGTGAGGGTTATGGGGAGCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp GGTGTCGCGGCCCGATCCGGCCGACGCCGCCGCTGTTaGCCGCGCTGCTCAGGCGGACGCCGCTGGCGCCAT +
Preference number: 6 (lower is better)
Translates to: GVAARSGRRRRC*PRCSGGRRWRH
Trigger: ATGGCGCCAGCGGCGTCCGCCTGAGCAGCGCGGGCAACAGCGGCGGCGTCGGCCGGATCGGGCCGCGACACC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS CAA 72 bp AGGTGTCGCGGCCCGATCCGGCCGACGCCGCCGCTGTaGCCCGCGCTGCTCAGGCGGACGCCGCTGGCGCCA +
Preference number: 6 (lower is better)
Translates to: RCRGPIRPTPPL*PALLRRTPLAP
Trigger: TGGCGCCAGCGGCGTCCGCCTGAGCAGCGCGGGCAACAGCGGCGGCGTCGGCCGGATCGGGCCGCGACACCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000468379.1
CDS CAA 90 bp ATGGCCAGGAGGTGTCGCGGCCCGATCCGGCCGACGCCGCCGCTGTaGCCCGCGCTGCTCAGGCGGACGCCGCTGGCGCCATGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: MARRCRGPIRPTPPL*PALLRRTPLAPWSP
Trigger: CGGGCTCCATGGCGCCAGCGGCGTCCGCCTGAGCAGCGCGGGCAACAGCGGCGGCGTCGGCCGGATCGGGCCGCGACACCTCCTGGCCAT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373312.4
CDS CCA 72 bp GGGCGTCGTCCAGGTGCGTGGACAGCACGTCCCCCATaGCCAGGAGGTGTCGCGGCCCGATCCGGCCGACGC +
Preference number: 6 (lower is better)
Translates to: GRRPGAWTARPP*PGGVAARSGRR
Trigger: GCGTCGGCCGGATCGGGCCGCGACACCTCCTGGCCATGGGGGACGTGCTGTCCACGCACCTGGACGACGCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000468379.1
CDS CCA 72 bp CTGCGATGTGCTGGCGCCGGGCGTCGTCCAGGTGCGTaGACAGCACGTCCCCCATGGCCAGGAGGTGTCGCG +
Preference number: 6 (lower is better)
Translates to: LRCAGAGRRPGA*TARPPWPGGVA
Trigger: CGCGACACCTCCTGGCCATGGGGGACGTGCTGTCCACGCACCTGGACGACGCCCGGCGCCAGCACATCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000468379.1
CDS GCA 72 bp GCGTCCGAGATCTGGATCCACTGCCGCTGCCGCTCCTaGGGTTTCCCCTTCAGCCGCGGGCCGAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: ASEIWIHCRCRS*GFPFSRGPSSA
Trigger: GGCAGAGCTCGGCCCGCGGCTGAAGGGGAAACCGCAGGAGCGGCAGCGGCAGTGGATCCAGATCTCGGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp TGGTACACGGCGTCCGAGATCTGGATCCACTGCCGCTaGCGCTCCTGCGGTTTCCCCTTCAGCCGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: WYTASEIWIHCR*RSCGFPFSRGP
Trigger: CGGCCCGCGGCTGAAGGGGAAACCGCAGGAGCGGCAGCGGCAGTGGATCCAGATCTCGGACGCCGTGTACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp GGAACGGCTGCCCGGAGTCACGCAGCCGGGGCCCTCTaGGACAGACCAGACCTACTCTCAGGAGACCCCCTC +
Preference number: 6 (lower is better)
Translates to: GTAARSHAAGAL*DRPDLLSGDPL
Trigger: GAGGGGGTCTCCTGAGAGTAGGTCTGGTCTGTCCCAGAGGGCCCCGGCTGCGTGACTCCGGGCAGCCGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465154.1
CDS TCA 72 bp GCCGCAGACCTTGGGCCAGCAGGCCTCGGATCTCAGTaGCACCGTCCGGGGACGCAGGTGGTGGTGACTCAG +
Preference number: 6 (lower is better)
Translates to: AADLGPAGLGSQ*HRPGTQVVVTQ
Trigger: CTGAGTCACCACCACCTGCGTCCCCGGACGGTGTCACTGAGATCCGAGGCCTGCTGGCCCAAGGTCTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp TCGTCCAGTGGCACCTTGCGCCAGAGCAGCTGGGCCTaGGGCAGCCCCGTGCCCTCAATCTCATGGCGCATG +
Preference number: 6 (lower is better)
Translates to: SSSGTLRQSSWA*GSPVPSISWRM
Trigger: CATGCGCCATGAGATTGAGGGCACGGGGCTGCCGCAGGCCCAGCTGCTCTGGCGCAAGGTGCCACTGGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS CAA 72 bp ATGACGGCCTGCATGGCCGGCTGCACCTGCTGCACCTaGGACAGCACCTCCTCGAAGCGCGCCTTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: MTACMAGCTCCT*DSTSSKRALAC
Trigger: GCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCAT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 72 bp CAGTCGATGGGGGCGCCCTCGGCCAGCAGGTGCAGGTaGGGGTCGCTGTTGTGCATGACCATGCTGTCCCGG +
Preference number: 6 (lower is better)
Translates to: QSMGAPSASRCR*GSLLCMTMLSR
Trigger: CCGGGACAGCATGGTCATGCACAACAGCGACCCCAACCTGCACCTGCTGGCCGAGGGCGCCCCCATCGACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000484348.2
CDS GCA 72 bp TTTTCTGCGATGTGCTGGCGCCGGGCGTCGTCCAGGTaGGTGGACAGCACGTCCCCCATGGCCAGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: FSAMCWRRASSR*VDSTSPMARRC
Trigger: ACACCTCCTGGCCATGGGGGACGTGCTGTCCACGCACCTGGACGACGCCCGGCGCCAGCACATCGCAGAAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000468379.1
CDS GCA 72 bp TCAGTTCGGATGACGGCCTGCATGGCCGGCTGCACCTaGTGCACCTTGGACAGCACCTCCTCGAAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: SVRMTACMAGCT*CTLDSTSSKRA
Trigger: GGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp CAGGGACCCACTGGCCTAGAACTCAGTCTGCACCCCTaGACTGTCCTCGGTGGTGGTGTGGAGGGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: QGPTGLELSLHP*TVLGGGVEGGV
Trigger: CACCCCGCCCTCCACACCACCACCGAGGACAGTGCAGGGGTGCAGACTGAGTTCTAGGCCAGTGGGTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp TCAGTTCGGATGACGGCCTGCATGGCCGGCTGCACCTGCTGCACCTaGGACAGCACCTCCTCGAAGCGCGCCTTGGCCTGCTCGTACACC +
Preference number: 6 (lower is better)
Translates to: SVRMTACMAGCTCCT*DSTSSKRALACSYT
Trigger: GGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp GCTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTTaGCCTGCTCGTACACCATGTGGTACACGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: AAPWTAPPRSAP*PARTPCGTRRP
Trigger: CGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp TGGACACCTGCTCTCCAGTCTCCTGGTCGCTGGGCTTaGGGGGCCCAAGGTCCACAGCCTTTCCAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: WTPALQSPGRWA*GAQGPQPFQAG
Trigger: TCCTGCCTGGAAAGGCTGTGGACCTTGGGCCCCCCAAGCCCAGCGACCAGGAGACTGGAGAGCAGGTGTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 72 bp CGGGGCAGCTCCGACTTGCAGGTAGGGGCCAGCTTCTaGAGCAGGAACGGGATGCTGATCTGCAGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: RGSSDLQVGASF*SRNGMLICSSA
Trigger: GGCGCTGCTGCAGATCAGCATCCCGTTCCTGCTCAAGAAGCTGGCCCCTACCTGCAAGTCGGAGCTGCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000484348.2
CDS CAA 72 bp CCTCCTAGGGGCGGTGCCGGCCTCACCTCGCCCAGCTaGTCAATGCCGCCCTCGTTGATGACGTTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: PPRGGAGLTSPS*SMPPSLMTFRF
Trigger: GAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCGAGGTGAGGCCGGCACCGCCCCTAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465154.1
CDS CAA 90 bp GGCTGCACCTGCTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTaGGCCTGCTCGTACACCATGTGGTACACGGCGTCCGAGATCTGG +
Preference number: 6 (lower is better)
Translates to: GCTCCTLDSTSSKRA*ACSYTMWYTASEIW
Trigger: CCAGATCTCGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp TCCTGGAACCGGGGCAGCTCCGACTTGCAGGTAGGGGCCAGCTTCTaGAGCAGGAACGGGATGCTGATCTGCAGCAGCGCCTCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: SWNRGSSDLQVGASF*SRNGMLICSSASRK
Trigger: CTTCCGGGAGGCGCTGCTGCAGATCAGCATCCCGTTCCTGCTCAAGAAGCTGGCCCCTACCTGCAAGTCGGAGCTGCCCCGGTTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000484348.2
CDS CAA 90 bp AGGAGACCCCCTCCTAGGGGCGGTGCCGGCCTCACCTCGCCCAGCTaGTCAATGCCGCCCTCGTTGATGACGTTCAGGTTCATGTCCGTG +
Preference number: 6 (lower is better)
Translates to: RRPPPRGGAGLTSPS*SMPPSLMTFRFMSV
Trigger: CACGGACATGAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCGAGGTGAGGCCGGCACCGCCCCTAGGAGGGGGTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465154.1
CDS CCA 72 bp AGCTGGGCCTGCGGCAGCCCCGTGCCCTCAATCTCATaGCGCATGCTGTTGAAGAGAGCCACGCCATACTGG +
Preference number: 6 (lower is better)
Translates to: SWACGSPVPSIS*RMLLKRATPYW
Trigger: CCAGTATGGCGTGGCTCTCTTCAACAGCATGCGCCATGAGATTGAGGGCACGGGGCTGCCGCAGGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS CCA 72 bp TCCTCGAAGCGCGCCTTGGCCTGCTCGTACACCATGTaGTACACGGCGTCCGAGATCTGGATCCACTGCCGC +
Preference number: 6 (lower is better)
Translates to: SSKRALACSYTM*YTASEIWIHCR
Trigger: GCGGCAGTGGATCCAGATCTCGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp CTGGCTGGTGGGGACCATCAGGGCCTCCAGGATGGATaGGATGTAGGGCTGGACATGGTTCCGCACGCACAC +
Preference number: 6 (lower is better)
Translates to: LAGGDHQGLQDG*DVGLDMVPHAH
Trigger: GTGTGCGTGCGGAACCATGTCCAGCCCTACATCCCATCCATCCTGGAGGCCCTGATGGTCCCCACCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000465154.1
CDS CAA 72 bp TGCTGCACCTTGGACAGCACCTCCTCGAAGCGCGCCTaGGCCTGCTCGTACACCATGTGGTACACGGCGTCC +
Preference number: 6 (lower is better)
Translates to: CCTLDSTSSKRA*ACSYTMWYTAS
Trigger: GGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGTGCAGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp AGGGCCACCCCTCCCCTGGCCAGCTCCAGATGCCTGTGCAGGGCATaGTGGCCTGGGATGGGTGCTCCTTTACCTGGTAAGGAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: RATPPLASSRCLCRA*WPGMGAPLPGKELP
Trigger: TGGCAACTCCTTACCAGGTAAAGGAGCACCCATCCCAGGCCACAATGCCCTGCACAGGCATCTGGAGCTGGCCAGGGGAGGGGTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476091.1
CDS GCA 72 bp ACCTTGGACAGCACCTCCTCGAAGCGCGCCTTGGCCTaGTCGTACACCATGTGGTACACGGCGTCCGAGATC +
Preference number: 6 (lower is better)
Translates to: TLDSTSSKRALA*SYTMWYTASEI
Trigger: GATCTCGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp TCCATGTCAGTTCGGATGACGGCCTGCATGGCCGGCTaGACCTGCTGCACCTTGGACAGCACCTCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: SMSVRMTACMAG*TCCTLDSTSSK
Trigger: CTTCGAGGAGGTGCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp GATGTAGGGCTGGACATGGTTCCGCACGCACACCTCTaGCTTGGGGAGGATGAAGGCTCGGATCTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: DVGLDMVPHAHL*LGEDEGSDLAG
Trigger: GCCAGCAAGATCCGAGCCTTCATCCTCCCCAAGGCAGAGGTGTGCGTGCGGAACCATGTCCAGCCCTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000465154.1
CDS CAA 90 bp GGCGGTGCCGGCCTCACCTCGCCCAGCTTGTCAATGCCGCCCTCGTaGATGACGTTCAGGTTCATGTCCGTGACCTCCTTGAAGAAGACA +
Preference number: 6 (lower is better)
Translates to: GGAGLTSPSLSMPPS*MTFRFMSVTSLKKT
Trigger: TGTCTTCTTCAAGGAGGTCACGGACATGAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCGAGGTGAGGCCGGCACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465154.1
CDS TCA 72 bp CGTAGAGCACCAGCCCGTAGTTGTGGGGCACGAGGCTaGAGCGGTTTCTCCACTTCTTGCTGTCCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: RRAPARSCGARG*SGFSTSCCPPG
Trigger: ACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCTCGTGCCCCACAACTACGGGCTGGTGCTCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS TCA 72 bp GCTCCTTGGACTGTCGGTACATGCGGATGGCATCTGTaGACGCAGGGCCCTCTACCTTGGAGTCCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: APWTVGTCGWHL*TQGPLPWSPQG
Trigger: TCCCTGAGGACTCCAAGGTAGAGGGCCCTGCGTTCACAGATGCCATCCGCATGTACCGACAGTCCAAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS TCA 72 bp CCGCGGCCTCCTTCACAGCCTGCAGGATGTCCTTCATaGCGGTCTGCAGCACCACCTCCTCGTACGTGTTTT +
Preference number: 6 (lower is better)
Translates to: PRPPSQPAGCPS*RSAAPPPRTCF
Trigger: AAAACACGTACGAGGAGGTGGTGCTGCAGACCGTCATGAAGGACATCCTGCAGGCTGTGAAGGAGGCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000484348.2
CDS GCA 72 bp GCAGCGCCTCCCGGAAGAACCTCTTCCGCACAGAGCTaGTGTCGTAGTCGTATTTCTTCAGCACCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: AAPPGRTSSAQS*CRSRISSAPAP
Trigger: TGGAGCGGGTGCTGAAGAAATACGACTACGACAGCAGCTCTGTGCGGAAGAGGTTCTTCCGGGAGGCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000484348.2
CDS CAA 72 bp TTGTGGGGCACGAGGCTGAAGCGGTTTCTCCACTTCTaGCTGTCCTCCTGGTGCTGGAAGAGGTTCCCCGAG +
Preference number: 6 (lower is better)
Translates to: LWGTRLKRFLHF*LSSWCWKRFPE
Trigger: CTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCTCGTGCCCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS CAA 72 bp GGCCTCACCTCGCCCAGCTTGTCAATGCCGCCCTCGTaGATGACGTTCAGGTTCATGTCCGTGACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GLTSPSLSMPPS*MTFRFMSVTSL
Trigger: CAAGGAGGTCACGGACATGAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCGAGGTGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465154.1
CDS CAA 90 bp ACGGCATTGTCCATTTGCTCCCGCATGTGGATCTGGGCTCGCTGCTaGAACACGGACGTGCTGGACACATCAAATCGCTGCTGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: TALSICSRMWIWARC*NTDVLDTSNRCCSP
Trigger: CGGGCTGCAGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGGACAATGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp GAAGGCTCGGATCTTGCTGGCAAGGTGCTCCTTGGAGGTGATAATTaGGTCCATGTCAGTTCGGATGACGGCCTGCATGGCCGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: EGSDLAGKVLLGGDN*VHVSSDDGLHGRLH
Trigger: GTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp ATGCCGCCCTCGTTGATGACGTTCAGGTTCATGTCCGTGACCTCCTaGAAGAAGACATCTCGCACCTCAGTGAAGCCCTGGCTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: MPPSLMTFRFMSVTS*KKTSRTSVKPWLVG
Trigger: CCCCACCAGCCAGGGCTTCACTGAGGTGCGAGATGTCTTCTTCAAGGAGGTCACGGACATGAACCTGAACGTCATCAACGAGGGCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000465154.1
CDS GCA 72 bp CTGAAGCGGTTTCTCCACTTCTTGCTGTCCTCCTGGTaGTGGAAGAGGTTCCCCGAGAAGACGATGCGCTCG +
Preference number: 6 (lower is better)
Translates to: LKRFLHFLLSSW*WKRFPEKTMRS
Trigger: CGAGCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS GCA 72 bp CAGGTATTGGTCCACGGACGTGAGGATTTTGTAGCCTaGACTGTTGATGACGGCTCGTGGTGGGACCTGCCG +
Preference number: 6 (lower is better)
Translates to: QVLVHGREDFVA*TVDDGSWWDLP
Trigger: CGGCAGGTCCCACCACGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTCACGTCCGTGGACCAATACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000476091.1
CDS GCA 72 bp TCAGGGATTCCATTGTTGCAGTGCCGGATGCAGTCCTaGAGCACAGCCTGCCACTTGTCCTGCTCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SGIPLLQCRMQS*STACHLSCSAS
Trigger: AGAAGCCGAGCAGGACAAGTGGCAGGCTGTGCTGCAGGACTGCATCCGGCACTGCAACAATGGAATCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp GTGATAATTTGGTCCATGTCAGTTCGGATGACGGCCTaGATGGCCGGCTGCACCTGCTGCACCTTGGACAGC +
Preference number: 6 (lower is better)
Translates to: VIIWSMSVRMTA*MAGCTCCTLDS
Trigger: GCTGTCCAAGGTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp TGCTTGAACACGGACGTGCTGGACACATCAAATCGCTaGTGCAGCCCGTCCAGTCGCAGCGACTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: CLNTDVLDTSNR*CSPSSRSDSIF
Trigger: GAAGATGGAGTCGCTGCGACTGGACGGGCTGCAGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp AAGCGGTTTCTCCACTTCTTGCTGTCCTCCTGGTGCTaGAAGAGGTTCCCCGAGAAGACGATGCGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: KRFLHFLLSSWC*KRFPEKTMRSS
Trigger: GGACGAGCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS CCA 72 bp AGGCTGAAGCGGTTTCTCCACTTCTTGCTGTCCTCCTaGTGCTGGAAGAGGTTCCCCGAGAAGACGATGCGC +
Preference number: 6 (lower is better)
Translates to: RLKRFLHFLLSS*CWKRFPEKTMR
Trigger: GCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAGAAGTGGAGAAACCGCTTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS CCA 72 bp TCCTTGAAGAAGACATCTCGCACCTCAGTGAAGCCCTaGCTGGTGGGGACCATCAGGGCCTCCAGGATGGAT +
Preference number: 6 (lower is better)
Translates to: SLKKTSRTSVKP*LVGTIRASRMD
Trigger: ATCCATCCTGGAGGCCCTGATGGTCCCCACCAGCCAGGGCTTCACTGAGGTGCGAGATGTCTTCTTCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000465154.1
CDS CAA 72 bp ATGCGGATGGCATCTGTGAACGCAGGGCCCTCTACCTaGGAGTCCTCAGGGATTCCATTGTTGCAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: MRMASVNAGPST*ESSGIPLLQCR
Trigger: CCGGCACTGCAACAATGGAATCCCTGAGGACTCCAAGGTAGAGGGCCCTGCGTTCACAGATGCCATCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp GCCTTGGGGAGGATGAAGGCTCGGATCTTGCTGGCAAGGTGCTCCTaGGAGGTGATAATTTGGTCCATGTCAGTTCGGATGACGGCCTGC +
Preference number: 6 (lower is better)
Translates to: ALGRMKARILLARCS*EVIIWSMSVRMTAC
Trigger: GCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCTTCATCCTCCCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS TCA 72 bp CCATTTGCTCCCGCATGTGGATCTGGGCTCGCTGCTTaGACACGGACGTGCTGGACACATCAAATCGCTGCT +
Preference number: 6 (lower is better)
Translates to: PFAPACGSGLAA*TRTCWTHQIAA
Trigger: AGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp TTGAACACGGACGTGCTGGACACATCAAATCGCTGCTaGAGCCCGTCCAGTCGCAGCGACTCCATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LNTDVLDTSNRC*SPSSRSDSIFS
Trigger: TGAGAAGATGGAGTCGCTGCGACTGGACGGGCTGCAGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp TACACGGCATTGTCCATTTGCTCCCGCATGTGGATCTaGGCTCGCTGCTTGAACACGGACGTGCTGGACACA +
Preference number: 6 (lower is better)
Translates to: YTALSICSRMWI*ARCLNTDVLDT
Trigger: TGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGGACAATGCCGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 72 bp TCCATTTGCTCCCGCATGTGGATCTGGGCTCGCTGCTaGAACACGGACGTGCTGGACACATCAAATCGCTGC +
Preference number: 6 (lower is better)
Translates to: SICSRMWIWARC*NTDVLDTSNRC
Trigger: GCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 72 bp TGGCCTGGGATGGGTGCTCCTTTACCTGGTAAGGAGTaGCCAATGAGCTCCAGGTATTGGTCCACGGACGTG +
Preference number: 6 (lower is better)
Translates to: WPGMGAPLPGKE*PMSSRYWSTDV
Trigger: CACGTCCGTGGACCAATACCTGGAGCTCATTGGCAACTCCTTACCAGGTAAAGGAGCACCCATCCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476091.1
CDS TCA 72 bp GCAGCCCCGTGCCCTCAATCTCATGGCGCATGCTGTTaGAGAGAGCCACGCCATACTGGTCTTCATAGAACT +
Preference number: 6 (lower is better)
Translates to: AAPCPQSHGACC*REPRHTGLHRT
Trigger: AGTTCTATGAAGACCAGTATGGCGTGGCTCTCTTCAACAGCATGCGCCATGAGATTGAGGGCACGGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
CDS TCA 72 bp GCAGCACCACCTCCTCGTACGTGTTTTCCACCAGGATaGACCTGGCAAAGTCCTCGAAGATCAGCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: AAPPPRTCFPPG*TWQSPRRSAPG
Trigger: TCCAGGAGCTGATCTTCGAGGACTTTGCCAGGTTCATCCTGGTGGAAAACACGTACGAGGAGGTGGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000484348.2
CDS GCA 72 bp TTGTCCATTTGCTCCCGCATGTGGATCTGGGCTCGCTaGTTGAACACGGACGTGCTGGACACATCAAATCGC +
Preference number: 6 (lower is better)
Translates to: LSICSRMWIWAR*LNTDVLDTSNR
Trigger: GCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCCCAGATCCACATGCGGGAGCAAATGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp GAGGATTTTGTAGCCTGCACTGTTGATGACGGCTCGTaGTGGGACCTGCCGCTCATAGGCCGCTTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: EDFVACTVDDGS*WDLPLIGRFVF
Trigger: GAAAACAAAGCGGCCTATGAGCGGCAGGTCCCACCACGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000476091.1
CDS CAA 72 bp TCCATGTACTCGCCCAGCTTGTCAATGCCGCCCTCGTaGATGACGTTCAGGTTCATGTCCGTGACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SMYSPSLSMPPS*MTFRFMSVTSL
Trigger: CAAGGAGGTCACGGACATGAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCGAGTACATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp AGGGCATTGTGGCCTGGGATGGGTGCTCCTTTACCTGGTAAGGAGTaGCCAATGAGCTCCAGGTATTGGTCCACGGACGTGAGGATTTTG +
Preference number: 6 (lower is better)
Translates to: RALWPGMGAPLPGKE*PMSSRYWSTDVRIL
Trigger: CAAAATCCTCACGTCCGTGGACCAATACCTGGAGCTCATTGGCAACTCCTTACCAGGTAAAGGAGCACCCATCCCAGGCCACAATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476091.1
CDS CCA 72 bp GATTTTGTAGCCTGCACTGTTGATGACGGCTCGTGGTaGGACCTGCCGCTCATAGGCCGCTTTGTTTTCGTA +
Preference number: 6 (lower is better)
Translates to: DFVACTVDDGSW*DLPLIGRFVFV
Trigger: TACGAAAACAAAGCGGCCTATGAGCGGCAGGTCCCACCACGAGCCGTCATCAACAGTGCAGGCTACAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373312.4
ENST00000373314.7
ENST00000468379.1
ENST00000476091.1
CDS CCA 72 bp ATCTTGCTGGCAAGGTGCTCCTTGGAGGTGATAATTTaGTCCATGTCAGTTCGGATGACGGCCTGCATGGCC +
Preference number: 6 (lower is better)
Translates to: ILLARCSLEVII*SMSVRMTACMA
Trigger: GGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 72 bp GATCTTGCTGGCAAGGTGCTCCTTGGAGGTGATAATTaGGTCCATGTCAGTTCGGATGACGGCCTGCATGGC +
Preference number: 6 (lower is better)
Translates to: DLAGKVLLGGDN*VHVSSDDGLHG
Trigger: GCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CAA 90 bp GACAGCTTCTCCATGTACTCGCCCAGCTTGTCAATGCCGCCCTCGTaGATGACGTTCAGGTTCATGTCCGTGACCTCCTTGAAGAAGACA +
Preference number: 6 (lower is better)
Translates to: DSFSMYSPSLSMPPS*MTFRFMSVTSLKKT
Trigger: TGTCTTCTTCAAGGAGGTCACGGACATGAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCGAGTACATGGAGAAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS GCA 72 bp TTGGGGAGGATGAAGGCTCGGATCTTGCTGGCAAGGTaGTCCTTGGAGGTGATAATTTGGTCCATGTCAGTT +
Preference number: 6 (lower is better)
Translates to: LGRMKARILLAR*SLEVIIWSMSV
Trigger: AACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCTTCATCCTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7
CDS CCA 72 bp AACAATGAGGTCTCCATCCACAGCTCTAAGCCTAGTTaGTCTCTCCGCAAACATGGGGCTGAAAGCAATGGG +
Preference number: 6 (lower is better)
Translates to: NNEVSIHSSKPS*SLRKHGAESNG
Trigger: CCCATTGCTTTCAGCCCCATGTTTGCGGAGAGACCAACTAGGCTTAGAGCTGTGGATGGAGACCTCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476091.1
CDS CAA 72 bp AGGATGAAGGCTCGGATCTTGCTGGCAAGGTGCTCCTaGGAGGTGATAATTTGGTCCATGTCAGTTCGGATG +
Preference number: 6 (lower is better)
Translates to: RMKARILLARCS*EVIIWSMSVRM
Trigger: CATCCGAACTGACATGGACCAAATTATCACCTCCAAGGAGCACCTTGCCAGCAAGATCCGAGCCTTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373312.4
ENST00000373314.7