RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NIBAN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135842

Ensembl transcript IDs: ENST00000367511.4, ENST00000417056.5, ENST00000461167.1, ENST00000487074.5

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTaGGGCTGGGCACTGCCTCTTTGGCTTCCTGCCTTACTGGGCAGT +
Preference number: 1 (lower is better)
Translates to: GWDSTLLSQGVGQPL*GWALPLWLPALLGS
Trigger: ACTGCCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCAGCCCCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp AGTCGGGCAGCCTTTGTGGGGCTGGGCACTGCCTCTTTGGCTTCCTaGCTTACTGGGCAGTGCATCTGGCCATCTGCCCCTTGGACTTTG +
Preference number: 1 (lower is better)
Translates to: SRAAFVGLGTASLAS*LTGQCIWPSAPWTL
Trigger: CAAAGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCAGCCCCACAAAGGCTGCCCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 90 bp CAAAGAAAGGAAGCTAGGAAGCTCCGGTGTGAGGTCAGCCTGGGCTaGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGG +
Preference number: 1 (lower is better)
Translates to: QRKEARKLRCEVSLG*DSTLLSQGVGQPLW
Trigger: CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGACCTCACACCGGAGCTTCCTAGCTTCCTTTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 90 bp TTGAGCAAAGAAAGGAAGCTAGGAAGCTCCGGTGTGAGGTCAGCCTaGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTT +
Preference number: 1 (lower is better)
Translates to: LSKERKLGSSGVRSA*AGTPHYCPRESGSL
Trigger: AAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGACCTCACACCGGAGCTTCCTAGCTTCCTTTCTTTGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 90 bp AGCCTTTGTGGGGCTGGGCACTGCCTCTTTGGCTTCCTGCCTTACTaGGCAGTGCATCTGGCCATCTGCCCCTTGGACTTTGGACTTTAC +
Preference number: 1 (lower is better)
Translates to: SLCGAGHCLFGFLPY*AVHLAICPLDFGLY
Trigger: GTAAAGTCCAAAGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCAGCCCCACAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 90 bp ATGATTGCCTCTGTGGGGGCTACAGCCAGCACGGGTGACTGTTCATaGCCTACCCTCTCTTGCAGTCTGACTGTGGACAAATGCCGAGTC +
Preference number: 1 (lower is better)
Translates to: MIASVGATASTGDCS*PTLSCSLTVDKCRV
Trigger: GACTCGGCATTTGTCCACAGTCAGACTGCAAGAGAGGGTAGGTCATGAACAGTCACCCGTGCTGGCTGTAGCCCCCACAGAGGCAATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 90 bp AAAATTAGCCGGGAATGGTGCCGCATGGCTGTAATTCCAGCTACTTaGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGG +
Preference number: 1 (lower is better)
Translates to: KISREWCRMAVIPAT*DADRGESPEPRRRR
Trigger: CCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGTAGCTGGAATTACAGCCATGCGGCACCATTCCCGGCTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp TGTTCTGGGTGTCCAGTTCCCACATTTCCCGAGCAGCCTGACGCATaGCAGGTCCTATGCACCAGGGATATTAAAGTGACTCAAGGAGGC +
Preference number: 1 (lower is better)
Translates to: CSGCPVPTFPEQPDA*QVLCTRDIKVTQGG
Trigger: GCCTCCTTGAGTCACTTTAATATCCCTGGTGCATAGGACCTGGCATGCGTCAGGCTGCTCGGGAAATGTGGGAACTGGACACCCAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 90 bp CAGCCAGCACGGGTGACTGTTCATGACCTACCCTCTCTTGCAGTCTaGCTGTGGACAAATGCCGAGTCCTTAAGAGATGGTGAAGTAGGC +
Preference number: 1 (lower is better)
Translates to: QPARVTVHDLPSLAV*LWTNAESLRDGEVG
Trigger: GCCTACTTCACCATCTCTTAAGGACTCGGCATTTGTCCACAGTCAGACTGCAAGAGAGGGTAGGTCATGAACAGTCACCCGTGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp CCAGTTCCCACATTTCCCGAGCAGCCTGACGCATGCCAGGTCCTATaGACCAGGGATATTAAAGTGACTCAAGGAGGCAGGAAGCCATTA +
Preference number: 1 (lower is better)
Translates to: PVPTFPEQPDACQVL*TRDIKVTQGGRKPL
Trigger: TAATGGCTTCCTGCCTCCTTGAGTCACTTTAATATCCCTGGTGCATAGGACCTGGCATGCGTCAGGCTGCTCGGGAAATGTGGGAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 90 bp AGCAGCCTGACGCATGCCAGGTCCTATGCACCAGGGATATTAAAGTaGCTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCT +
Preference number: 1 (lower is better)
Translates to: SSLTHARSYAPGILK*LKEAGSHYSRLWVS
Trigger: AGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACTTTAATATCCCTGGTGCATAGGACCTGGCATGCGTCAGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 90 bp CAGGATATGAGTGAGCACTGCAGAAAGCAGAGACTGGGGGAGAAGTaGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGACATG +
Preference number: 1 (lower is better)
Translates to: QDMSEHCRKQRLGEK*SLLPSPVVGSLKDM
Trigger: CATGTCTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTCTCTGCTTTCTGCAGTGCTCACTCATATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp TGCCTCTTTGGCTTCCTGCCTTACTGGGCAGTGCATCTGGCCATCTaGCCCTTGGACTTTGGACTTTACTTAAGAGAAAACTCAACAAGG +
Preference number: 1 (lower is better)
Translates to: CLFGFLPYWAVHLAI*PLDFGLYLRENSTR
Trigger: CCTTGTTGAGTTTTCTCTTAAGTAAAGTCCAAAGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCAGGAAGCCAAAGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp CTAATTTCAACACACCATGCTAAATGCCAGGATATGAGTGAGCACTaGAGAAAGCAGAGACTGGGGGAGAAGTGGTCTTTACTTCCTTCA +
Preference number: 1 (lower is better)
Translates to: LISTHHAKCQDMSEH*RKQRLGEKWSLLPS
Trigger: TGAAGGAAGTAAAGACCACTTCTCCCCCAGTCTCTGCTTTCTGCAGTGCTCACTCATATCCTGGCATTTAGCATGGTGTGTTGAAATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 90 bp ACTTTAGAAGGCAAACCCTCAAACCCGTCTCTTTATGGTAAAGTGTaGAGGCACATGTTGCCAACTGTTGCACCGACTGATACTATTATT +
Preference number: 1 (lower is better)
Translates to: TLEGKPSNPSLYGKV*RHMLPTVAPTDTII
Trigger: AATAATAGTATCAGTCGGTGCAACAGTTGGCAACATGTGCCTTCACACTTTACCATAAAGAGACGGGTTTGAGGGTTTGCCTTCTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp CTAAAGCAAAAATTCATCGTAGAACAATTCATGTCCACAAAGGTTTaGCTCAGTTGCTCATGCCCTGTATGCATTTCCTCTGGTTTTATT +
Preference number: 1 (lower is better)
Translates to: LKQKFIVEQFMSTKV*LSCSCPVCISSGFI
Trigger: AATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGATGAATTTTTGCTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 90 bp TCGCTCCAATCTGGAAACCACTCAAATGACACATACAAGTCTGTATaGAAAGCAAAACAAACTCATGGTGATATGCAGTTATTCCATTCA +
Preference number: 1 (lower is better)
Translates to: SLQSGNHSNDTYKSV*KAKQTHGDMQLFHS
Trigger: TGAATGGAATAACTGCATATCACCATGAGTTTGTTTTGCTTTTCATACAGACTTGTATGTGTCATTTGAGTGGTTTCCAGATTGGAGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp ATCGTAGAACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATaGCCTGTATGCATTTCCTCTGGTTTTATTATTCAAATTAAGAAA +
Preference number: 1 (lower is better)
Translates to: IVEQFMSTKVCLSCS*PVCISSGFIIQIKK
Trigger: TTTCTTAATTTGAATAATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 90 bp AAATTCATCGTAGAACAATTCATGTCCACAAAGGTTTGCCTCAGTTaGTCATGCCCTGTATGCATTTCCTCTGGTTTTATTATTCAAATT +
Preference number: 1 (lower is better)
Translates to: KFIVEQFMSTKVCLS*SCPVCISSGFIIQI
Trigger: AATTTGAATAATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGATGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CAA 90 bp CTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTaGTGGGGCTGGGCACTGCCTCTTTGGCTTCCTGCCTTACTGGGC +
Preference number: 2 (lower is better)
Translates to: LGWDSTLLSQGVGQP*WGWALPLWLPALLG
Trigger: GCCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCAGCCCCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGAGGCGGAGGTTGCAGTaGGCCGAGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWRRRLQ*AEITPL
Trigger: CAGTGGTGTGATCTCGGCTCACTGCAACCTCCGCCT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGGTGCATCTGGCCATCTaGCCCTTGGACTTTGGACTT +
Preference number: 2 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWVHLAI*PLDFGL
Trigger: AAGTCCAAAGTCCAAGGGGCAGATGGCCAGATGCAC...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTACAGCCAGCACGGGTaGCTGTTCATGACCTACCCT +
Preference number: 2 (lower is better)
Translates to: TWDADRGESPEPRRRRLQYSQHG*LFMTYP
Trigger: AGGGTAGGTCATGAACAGTCACCCGTGCTGGCTGTA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTATTAGCCGGGAATGGTaGCGCATGGCTGTAATTCCA +
Preference number: 2 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCISREW*RMAVIP
Trigger: TGGAATTACAGCCATGCGGCACCATTCCCGGCTAAT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCTGACTGTGGACAAATaGCGAGTCCTTAAGAGATGG +
Preference number: 2 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCLTVDK*RVLKRW
Trigger: CCATCTCTTAAGGACTCGGCATTTGTCCACAGTCAG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTAAGGTTTGCCTCAGTTaGTCATGCCCTGTATGCATT +
Preference number: 2 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCKVCLS*SCPVCI
Trigger: AATGCATACAGGGCATGAGCAACTGAGGCAAACCTT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGCTGCCCCTTGGACTTTaGACTTTACTTAAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWLPLGL*TLLKRK
Trigger: TTTTCTCTTAAGTAAAGTCCAAAGTCCAAGGGGCAG...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGAGAAGATTGCACAATTaGAAAGTGCAGAGTATACTC +
Preference number: 2 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWRRLHN*KVQSIL
Trigger: GAGTATACTCTGCACTTTTCAATTGTGCAATCTTCT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTTTTTTGGTAACAGCTTaGATGCAACCCCTAAGTGTA +
Preference number: 2 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCFLVTA*MQPLSV
Trigger: TACACTTAGGGGTTGCATGCAAGCTGTTACCAAAAA...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCTCTCACCCCAAGTATaGCATTGTCTTTGTAATTCT +
Preference number: 2 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCLSPQV*HCLCNS
Trigger: AGAATTACAAAGACAATGGCATACTTGGGGTGAGAG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CAA 90 bp TTTGGCTTCCTGCCTTACTGGGCAGTGCATCTGGCCATCTGCCCCTaGGACTTTGGACTTTACTTAAGAGAAAACTCAACAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: FGFLPYWAVHLAICP*DFGLYLRENSTRAE
Trigger: TTCTGCCCTTGTTGAGTTTTCTCTTAAGTAAAGTCCAAAGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCAGGAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATACTTCCTTCACCTGTaGTGGGATCCCTCAAAGACA +
Preference number: 2 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGYFLHL*WDPSKT
Trigger: TGTCTTTGAGGGATCCCACCACAGGTGAAGGAAGTA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGGTGTGAGGTCAGCCTaGGCTGGGACTCCACACTAC +
Preference number: 2 (lower is better)
Translates to: NKICKARKLLDKLESYPGGVRSA*AGTPHY
Trigger: GTAGTGTGGAGTCCCAGCCCAGGCTGACCTCACACC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTCAGAGGAGAATCTCCTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: NKICKARKLLDKLESYPGQRRIS*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTG...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGTGCACAATTGAAAAGTaGAGAGTATACTCAAAACTG +
Preference number: 2 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKCTIEK*RVYSKL
Trigger: CAGTTTTGAGTATACTCTGCACTTTTCAATTGTGCA...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp CATGATACAGCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAACATCTGCTTAAAAGATaGAACCAGCCTCCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: HDTARMTRLFVSEGCTSQHLLKR*NQPPSK
Trigger: TTTGGAAGGAGGCTGGTTTCATCTTTTAAGCAGATG...TTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGCTGTATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
3UTR-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTATGTCCACAAAGGTTTaGCTCAGTTGCTCATGCCCT +
Preference number: 2 (lower is better)
Translates to: LRENSTRAESPIQNVFLPMSTKV*LSCSCP
Trigger: AGGGCATGAGCAACTGAGGCAAACCTTTGTGGACAT...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTATGCCAGGATATGAGTaGGCACTGCAGAAAGCAGAG +
Preference number: 2 (lower is better)
Translates to: NKICKARKLLDKLESYPGMPGYE*ALQKAE
Trigger: CTCTGCTTTCTGCAGTGCTCACTCATATCCTGGCAT...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCTCTATTGGGCATGATTaGCTCTGTGGGGGCTACAGC +
Preference number: 2 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSSIGHD*LCGGYS
Trigger: GCTGTAGCCCCCACAGAGGCAATCATGCCCAATAGA...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAAAGCCTAATTTGGAATaGTTTCAGTCTTACCCAGGC +
Preference number: 2 (lower is better)
Translates to: NPSFCLLREEPLGETRSKKPNLE*FQSYPG
Trigger: GCCTGGGTAAGACTGAAAGCATTCCAAATTAGGCTT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGTAATTCCAGCTACTTaGGACGCTGACAGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: NKICKARKLLDKLESYPGVIPAT*DADRGE
Trigger: TTCTCCTCTGTCAGCGTCCCAAGTAGCTGGAATTAC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp ATAATTACACCTGACATTAAGTGGTTTCCCTGCAGATTCCTTCGTGACAACAGAAAAGTAAAAGGTCCATaGTACAGCAAGAATGACTCG +
Preference number: 2 (lower is better)
Translates to: IITPDIKWFPCRFLRDNRKVKGP*YSKNDS
Trigger: CGAGTCATTCTTGCTGTATCATGGACCTTTTACTTT...TCTGTTGTCACGAAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGTAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
3UTR CAA 90 bp ACTAAAGCAAAAATTCATCGTAGAACAATTCATGTCCACAAAGGTTaGCCTCAGTTGCTCATGCCCTGTATGCATTTCCTCTGGTTTTAT +
Preference number: 2 (lower is better)
Translates to: TKAKIHRRTIHVHKG*PQLLMPCMHFLWFY
Trigger: ATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGATGAATTTTTGCTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTTCTGGTTAAATGGTTaGACTGTGTGTGAAGCAAAT +
Preference number: 2 (lower is better)
Translates to: LRENSTRAESPIQNVFLPFWLNG*TVCEAN
Trigger: ATTTGCTTCACACACAGTTCAACCATTTAACCAGAA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAAGTCTAAGCCTAATTTaGAATGCTTTCAGTCTTACC +
Preference number: 2 (lower is better)
Translates to: NPSFCLLREEPLGETRSKSLSLI*NAFSLT
Trigger: GGTAAGACTGAAAGCATTCCAAATTAGGCTTAGACT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCTTTCTCAGTCTTCCCTaGAATACTATTCCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSFLSLP*NTIPSS
Trigger: TGAGGAGGGAATAGTATTGCAGGGAAGACTGAGAAA...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTTGTTCATCCATCCAATaGAGTGAAAGGTACTCTCTT +
Preference number: 2 (lower is better)
Translates to: NKICKARKLLDKLESYPGCSSIQ*SERYSL
Trigger: AAGAGAGTACCTTTCACTGCATTGGATGGATGAACA...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR GCA 90 bp ATAATTACACCTGACATTAAGTGGTTTCCCTGCAGATTCCTTCGTGACAACAGATTCAAATGTGACATCTaGTTAAAAGATGAAACCAGC +
Preference number: 2 (lower is better)
Translates to: IITPDIKWFPCRFLRDNRFKCDI*LKDETS
Trigger: GCTGGTTTCATCTTTTAAGCAGATGTCACATTTGAA...TCTGTTGTCACGAAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGTAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
3UTR CAA 90 bp AAAATTCATCGTAGAACAATTCATGTCCACAAAGGTTTGCCTCAGTaGCTCATGCCCTGTATGCATTTCCTCTGGTTTTATTATTCAAAT +
Preference number: 2 (lower is better)
Translates to: KIHRRTIHVHKGLPQ*LMPCMHFLWFYYSN
Trigger: ATTTGAATAATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGATGAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 72 bp GAAGCTAGGAAGCTCCGGTGTGAGGTCAGCCTGGGCTaGGACTCCACACTACTGTCCCAGGGAGTCGGGCAG +
Preference number: 3 (lower is better)
Translates to: EARKLRCEVSLG*DSTLLSQGVGQ
Trigger: CTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGACCTCACACCGGAGCTTCCTAGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 72 bp GGGGCTGGGCACTGCCTCTTTGGCTTCCTGCCTTACTaGGCAGTGCATCTGGCCATCTGCCCCTTGGACTTT +
Preference number: 3 (lower is better)
Translates to: GAGHCLFGFLPY*AVHLAICPLDF
Trigger: AAAGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 72 bp GAAAGGAAGCTAGGAAGCTCCGGTGTGAGGTCAGCCTaGGCTGGGACTCCACACTACTGTCCCAGGGAGTCG +
Preference number: 3 (lower is better)
Translates to: ERKLGSSGVRSA*AGTPHYCPRES
Trigger: CGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGACCTCACACCGGAGCTTCCTAGCTTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCTGGCCATCTGCCCCTaGGACTTTGGACTTTACTTA +
Preference number: 3 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCLAICP*DFGLYL
Trigger: TAAGTAAAGTCCAAAGTCCAAGGGGCAGATGGCCAG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 72 bp TCTGTGGGGGCTACAGCCAGCACGGGTGACTGTTCATaGCCTACCCTCTCTTGCAGTCTGACTGTGGACAAA +
Preference number: 3 (lower is better)
Translates to: SVGATASTGDCS*PTLSCSLTVDK
Trigger: TTTGTCCACAGTCAGACTGCAAGAGAGGGTAGGTCATGAACAGTCACCCGTGCTGGCTGTAGCCCCCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp ACATTTCCCGAGCAGCCTGACGCATGCCAGGTCCTATaGACCAGGGATATTAAAGTGACTCAAGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: TFPEQPDACQVL*TRDIKVTQGGR
Trigger: CCTGCCTCCTTGAGTCACTTTAATATCCCTGGTGCATAGGACCTGGCATGCGTCAGGCTGCTCGGGAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 72 bp AGTGAGCACTGCAGAAAGCAGAGACTGGGGGAGAAGTaGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTC +
Preference number: 3 (lower is better)
Translates to: SEHCRKQRLGEK*SLLPSPVVGSL
Trigger: GAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTCTCTGCTTTCTGCAGTGCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGCTTCTCTTGAATCTATaGGGCATGATTGCCTCTGTG +
Preference number: 3 (lower is better)
Translates to: TWDADRGESPEPRRRRLQLLLNL*GMIASV
Trigger: CACAGAGGCAATCATGCCCAATAGATTCAAGAGAAG...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGTTGAGAGCATACACCTaGGCTTTTGTCTTTATTCAT +
Preference number: 3 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWLRAYT*AFVFIH
Trigger: ATGAATAAAGACAAAAGCCAAGGTGTATGCTCTCAA...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp TGTCCAGTTCCCACATTTCCCGAGCAGCCTGACGCATaGCAGGTCCTATGCACCAGGGATATTAAAGTGACT +
Preference number: 3 (lower is better)
Translates to: CPVPTFPEQPDA*QVLCTRDIKVT
Trigger: AGTCACTTTAATATCCCTGGTGCATAGGACCTGGCATGCGTCAGGCTGCTCGGGAAATGTGGGAACTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATGTAATCCCAGCACTTaGGGAAGTCGAGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGCNPST*GSRGGW
Trigger: CCACCCACCTCGACTTCCCAAAGTGCTGGGATTACA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGAGGAAGGAACAAAGTaGTTTTTCGCCATGGTATCC +
Preference number: 3 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKEEGTK*FFAMVS
Trigger: GGATACCATGGCGAAAAACAACTTTGTTCCTTCCTC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 72 bp ACGCATGCCAGGTCCTATGCACCAGGGATATTAAAGTaGCTCAAGGAGGCAGGAAGCCATTATTCAAGGCTG +
Preference number: 3 (lower is better)
Translates to: THARSYAPGILK*LKEAGSHYSRL
Trigger: CAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACTTTAATATCCCTGGTGCATAGGACCTGGCATGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 72 bp GGCAAACCCTCAAACCCGTCTCTTTATGGTAAAGTGTaGAGGCACATGTTGCCAACTGTTGCACCGACTGAT +
Preference number: 3 (lower is better)
Translates to: GKPSNPSLYGKV*RHMLPTVAPTD
Trigger: ATCAGTCGGTGCAACAGTTGGCAACATGTGCCTTCACACTTTACCATAAAGAGACGGGTTTGAGGGTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp ACACACCATGCTAAATGCCAGGATATGAGTGAGCACTaGAGAAAGCAGAGACTGGGGGAGAAGTGGTCTTTA +
Preference number: 3 (lower is better)
Translates to: THHAKCQDMSEH*RKQRLGEKWSL
Trigger: TAAAGACCACTTCTCCCCCAGTCTCTGCTTTCTGCAGTGCTCACTCATATCCTGGCATTTAGCATGGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp TCAAAACTGTCATCCTACTGTTTTCTCAGTCTTCCCTaGAATACTATTCCCTCCTCAGACATCCTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SKLSSYCFLSLP*NTIPSSDILSS
Trigger: GGAGCTGAGGATGTCTGAGGAGGGAATAGTATTGCAGGGAAGACTGAGAAAACAGTAGGATGACAGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAAAAGGTTTGCCTCAGTaGCTCATGCCCTGTATGCAT +
Preference number: 3 (lower is better)
Translates to: NPSFCLLREEPLGETRSKKGLPQ*LMPCMH
Trigger: ATGCATACAGGGCATGAGCAACTGAGGCAAACCTTT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR TCA 72 bp TACTTCCTTCACCTGTGGTGGGATCCCTCAAAGACATaGGGATTTAAACACGCCAAGAAAAGTTGCAACAAT +
Preference number: 3 (lower is better)
Translates to: YFLHLWWDPSKT*GFKHAKKSCNN
Trigger: ATTGTTGCAACTTTTCTTGGCGTGTTTAAATCCTCATGTCTTTGAGGGATCCCACCACAGGTGAAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CCA 72 bp AGTTCTAGGAGGAAGGAACAAAGTTGTTTTTCGCCATaGTATCCCCAGTGCTTGGTATATAACAGAGACTCA +
Preference number: 3 (lower is better)
Translates to: SSRRKEQSCFSP*YPQCLVYNRDS
Trigger: TGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTTGTTCCTTCCTCCTAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp GTAGAACAATTCATGTCCACAAAGGTTTGCCTCAGTTaGTCATGCCCTGTATGCATTTCCTCTGGTTTTATT +
Preference number: 3 (lower is better)
Translates to: VEQFMSTKVCLS*SCPVCISSGFI
Trigger: AATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp AAATTCATCGTAGAACAATTCATGTCCACAAAGGTTTaGCTCAGTTGCTCATGCCCTGTATGCATTTCCTCT +
Preference number: 3 (lower is better)
Translates to: KFIVEQFMSTKV*LSCSCPVCISS
Trigger: AGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGATGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp AAGGAACAAAGTTGTTTTTCGCCATGGTATCCCCAGTaGTTGGTATATAACAGAGACTCAATTAGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: KEQSCFSPWYPQ*LVYNRDSISLL
Trigger: CAGCAAGCTAATTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTTGTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp ACCCGTCTCTTTATGGTAAAGTGTGAAGGCACATGTTaGCAACTGTTGCACCGACTGATACTATTATTAAGT +
Preference number: 3 (lower is better)
Translates to: TRLFMVKCEGTC*QLLHRLILLLS
Trigger: ACTTAATAATAGTATCAGTCGGTGCAACAGTTGGCAACATGTGCCTTCACACTTTACCATAAAGAGACGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR-3UTR CAA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCATGACCTACCCTCTCTaGCAGTCTGACTGTGGACAA +
Preference number: 3 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSMTYPL*QSDCGQ
Trigger: TTGTCCACAGTCAGACTGCAAGAGAGGGTAGGTCAT...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp CAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATaGCCTGTATGCATTTCCTCTGGTTTTATTATTCAA +
Preference number: 3 (lower is better)
Translates to: QFMSTKVCLSCS*PVCISSGFIIQ
Trigger: TTGAATAATAAAACCAGAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR GCA 72 bp CAAAGCATAATTACACCTGACATTAAGTGGTTTCCCTaGAGATTCCTTCGTGACAACAGAAAAGTAAAAGGT +
Preference number: 3 (lower is better)
Translates to: QSIITPDIKWFP*RFLRDNRKVKG
Trigger: ACCTTTTACTTTTCTGTTGTCACGAAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGTAATTATGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
3UTR CCA 72 bp ATGCATTATCAAAGCATAATTACACCTGACATTAAGTaGTTTCCCTGCAGATTCCTTCGTGACAACAGAAAA +
Preference number: 3 (lower is better)
Translates to: MHYQSIITPDIK*FPCRFLRDNRK
Trigger: TTTTCTGTTGTCACGAAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGTAATTATGCTTTGATAATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTAGGCTGAGCCGCCCATaGCCGCGAGCTGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCRLSRP*PRAACA
Trigger: AGCACAGGCAGCTCGCGGTCATGGGCGGCTCAGCCT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGCAGCTGGCTGGAGGCTaGGCCGCCCATGACCGCGAG +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQQLAGG*AAHDRE
Trigger: CTCGCGGTCATGGGCGGCTCAGCCTCCAGCCAGCTG...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CAA 72 bp GACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTaGTGGGGCTGGGCACTGCCTCTTTGGCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: DSTLLSQGVGQP*WGWALPLWLPA
Trigger: GGCAGGAAGCCAAAGAGGCAGTGCCCAGCCCCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGGGATGTAAGCGCACTTaGCCTCGTCCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWGCKRT*PRPAGW
Trigger: CCAGCCAGCTGGACGAGGGCAAGTGCGCTTACATCC...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGCCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWPGGGG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTTGTGCCCGGGAGTCCTaGTGTGTCCTCTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCCARES*CVLCCH
Trigger: GTGGCAACAGAGGACACAGCAGGACTCCCGGGCACA...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGGCTCTGGTTTGCATGTaGACGCCAGTGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWALVCM*TPVPSA
Trigger: TGCAGAAGGCACTGGCGTCCACATGCAAACCAGAGC...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCAGGACATCCGGGTTTaGAGCATCCTCCACCACCCA +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCQDIRV*SILHHP
Trigger: TGGGTGGTGGAGGATGCTCCAAACCCGGATGTCCTG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTAGAAGTAGCCGTGTCTaGAGAAGGGCTGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCRSSRV*RRAATG
Trigger: ACCTGTGGCAGCCCTTCTTCAGACACGGCTACTTCT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGAAACGTCTTTCTGCCTaGCAGCAGGCCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWKRLSA*QQAPNS
Trigger: GCTATTTGGGGCCTGCTGTCAGGCAGAAAGACGTTT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGTCTGAAGCTCTGGTTTaGATGTGGACGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWSEALV*MWTPVP
Trigger: AGGCACTGGCGTCCACATGCAAACCAGAGCTTCAGA...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGCCTCTTTGGCTTCCTaGCTTACTGGGCAGTGCATC +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCASLAS*LTGQCI
Trigger: GATGCACTGCCCAGTAAGGCAGGAAGCCAAAGAGGC...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCTGCCACAGGTACACTaGGAATTCCTTGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCLPQVH*EFLGQD
Trigger: GTCCTGCCCAAGGAATTCCCAGTGTACCTGTGGCAG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCTGTCAGCAACTTTCTaGGCGCCTTCAAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCLSATF*APSKNP
Trigger: CGGGTTCTTTGAAGGCGCTCAGAAAGTTGCTGACAG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGCAGAGGAGAATCTCCTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQQRRIS*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTG...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGCAGCCCTCTTGCTGTaGGGCATCCCCTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKAALLL*GIPFLG
Trigger: ACCGAGGAAGGGGATGCCTCACAGCAAGAGGGCTGC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTTGTCTGAAGAAGGGCTaGCACAGGTACACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCCLKKG*HRYTGN
Trigger: ATTCCCAGTGTACCTGTGGCAGCCCTTCTTCAGACA...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGTGGCCTGGGCCGCGCTaGTTTGCCCTCCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKWPGPR*FALPSL
Trigger: AAGAGATGGGAGGGCAAAGCAGCGCGGCCCAGGCCA...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGTTCAAAACGTCTTTCTaGCTGACAGCAGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWFKTSF*LTAGPK
Trigger: TTTGGGGCCTGCTGTCAGGCAGAAAGACGTTTTGAA...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCCCGCTGCTAGCTCCTaGAGGTTGATCCGACGGCGA +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKPAASS*RLIRRR
Trigger: TCGCCGTCGGATCAACCTCCAGGAGCTAGCAGCGGG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGTCGGGACAGGGAGGTTaGGCCTCCCTCTCGCTGACT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKSGQGG*ASLSLT
Trigger: AGTCAGCGAGAGGGAGGCCCAACCTCCCTGTCCCGA...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAACACTGGCCGTGGCCTaGGCCGCGCTGCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGTLAVA*AALLCP
Trigger: AGGGCAAAGCAGCGCGGCCCAGGCCACGGCCAGTGT...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCATTCACACTGGCCGTaGCCTGGGCCGCGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKHSHWP*PGPRCF
Trigger: AAAGCAGCGCGGCCCAGGCCACGGCCAGTGTGAATG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGGGTCATCCACTCTTaGAATAATCACCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCGVIHS*NNHLLS
Trigger: ACTGAGCAGGTGATTATTTCAAGAGTGGATGACCCC...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTTGGAGGCCTCTCCTTaGAGATGTGGGGAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQLEASP*RCGESN
Trigger: GTTGCTTTCCCCACATCTCCAAGGAGAGGCCTCCAA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGAGTTGTCGGGGTGGATaGCAGCTGCCTGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKSCRGG*QLPDWA
Trigger: AGCCCAGTCAGGCAGCTGCCATCCACCCCGACAACT...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTGAGCCCTCCACTGGCTaGCGGAGAGGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLEPSTG*RRGWAA
Trigger: GGCAGCCCAGCCTCTCCGCCAGCCAGTGGAGGGCTC...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGGGGCCACCATCGCTTTaGTCTTTCCAATTAAATAGT +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWGPPSL*SFQLNS
Trigger: ACTATTTAATTGGAAAGATCAAAGCGATGGTGGCCC...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGTCCTGTCGGAAGAATTaGACAGCTTCTAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWSCRKN*TASKKA
Trigger: AGCCTTTTTAGAAGCTGTGCAATTCTTCCGACAGGA...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGGGGTGGATGGCAGCTaGCTGACTGGGCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKGVDGS*LTGLFF
Trigger: GAAAAAGAGCCCAGTCAGGCAGCTGCCATCCACCCC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGTTTCTCAGTCTTCCCTaGAATACTATTCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWFLSLP*NTIPSS
Trigger: TGAGGAGGGAATAGTATTGCAGGGAAGACTGAGAAA...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTGTTCCTCAGAAACCTaGCTCTCACTGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQCSSET*LSLRQM
Trigger: CATCTGCCTCAGTGAGAGCCAGGTTTCTGAGGAACA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGGCTTCCTGCCTTACTaGGCAGTGCATCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKGFLPY*AVHLAI
Trigger: GATGGCCAGATGCACTGCCCAGTAAGGCAGGAAGCC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGAGCTTTTGGACAAGTTaGAATCTTACCCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWSFWTS*NLTLVV
Trigger: GACTACCAGGGTAAGATTCCAACTTGTCCAAAAGCT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGGCACAGTGGGAAGTGTaGTTTGAACTAGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQAQWEV*FELVPL
Trigger: AAGAGGCACTAGTTCAAATCACACTTCCCACTGTGC...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGAAGAACCCGAGGCAGTaGTGGGTTCTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKKNPRQ*WVLALP
Trigger: AGGAAGAGCCAGAACCCATCACTGCCTCGGGTTCTT...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGGGCCTCCCTCTCGCTaGCTTCACTTTCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKGPPSR*LHFLHS
Trigger: ACTGTGAAGAAAGTGAAGTCAGCGAGAGGGAGGCCC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTCCAGGGGCTCCTCGGTaGGCCCTCCACTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPPGAPR*ALHWLA
Trigger: CGCCAGCCAGTGGAGGGCTCACCGAGGAGCCCCTGG...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTAACATCTTTGGAACTTaGGAGCATACACCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCNIFGT*EHTPWL
Trigger: AAGCCAAGGTGTATGCTCTCAAGTTCCAAAGATGTT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTATCCATCCAATGCAGTaGAAGGTACTCTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCIHPMQ*KVLSFR
Trigger: CCTAAAAGAGAGTACCTTTCACTGCATTGGATGGAT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTATAAAGTTAGGGCACTaGTGTTCATCCATCCAATGC +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCIKLGH*CSSIQC
Trigger: GCATTGGATGGATGAACATCAGTGCCCTAACTTTAT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGCTGAGCGCGGAAACTaGCCGGTCCGCGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPAERGN*PVRARC
Trigger: GCAGCGGGCGCGGACCGGGCAGTTTCCGCGCTCAGC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGACGTTAAATCTCTTTaGTGTTCTACTTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCDVKSL*CSTSVR
Trigger: GCGCACTGAAGTAGAACAGCAAAGAGATTTAACGTC...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGTCTTTCGGATGGTGCTaGTGTCATAATCATATTGCT +
Preference number: 4 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWSFGWC*CHNHIA
Trigger: AGCAATATGATTATGACAGCAGCACCATCCGAAAGA...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGTGCTGTGTCCTCTGTTaGCACAGGATTCACCACGGG +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKCCVLC*HRIHHG
Trigger: CCCGTGGTGAATCCTGTGGCAACAGAGGACACAGCA...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGGGGTGCAAGAAGCCCTaGATTGAGCAAAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQGCKKP*IEQRKE
Trigger: TTCCTTTCTTTGCTCAATGCAGGGCTTCTTGCACCC...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGCTGTCTTTGGTGGTCTaGAAGTTCTGGCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQLSLVV*KFWLTS
Trigger: TGAAGTCAGCCAGAACTTCCAGACCACCAAAGACAG...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAATTTCCCGAGCAGCCTaGCGCATGCCAGGTCCTATG +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGISRAA*RMPGPM
Trigger: CATAGGACCTGGCATGCGTCAGGCTGCTCGGGAAAT...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGAGAGGGTCTGGGAAATaGCTGTCAGACAACAGATTA +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQRGSGK*LSDNRL
Trigger: TAATCTGTTGTCTGACAGGCATTTCCCAGACCCTCT...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATGCCTTACTGGGCAGTaGATCTGGCCATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGCLTGQ*IWPSAP
Trigger: AGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGACTTTTCTCCGCCGGCTaGGCCACCATCGCTTTGATC +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGLFSAG*ATIALI
Trigger: GATCAAAGCGATGGTGGCCCAGCCGGCGGAGAAAAG...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCCTGCTCAGTCCCATCTaGGGGTGGGCTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFLLSPI*GWAWPR
Trigger: CCTGGGCCAAGCCCACCCCCAGATGGGACTGAGCAG...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAGGTCAGAACCTAAGGTaGAGCCCTCTTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGGQNLR*SPLAVR
Trigger: CCTCACAGCAAGAGGGCTGCACCTTAGGTTCTGACC...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGGTAAGGATGAGATCTTaGTATGTTTCCCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQVRMRS*YVSQAC
Trigger: ACAAGCCTGGGAAACATAGCAAGATCTCATCCTTAC...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCCTGGTTTGACCCTGTaGGGGGCTTTAGATCTGTTA +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKPGLTL*GALDLL
Trigger: TAACAGATCTAAAGCCCCCCACAGGGTCAAACCAGG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAGGTTCTGGCTCTTCCTaGGCGGGTTCTTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGGSGSS*AGSSSS
Trigger: TGAGGATGAAGAACCCGCCCAGGAAGAGCCAGAACC...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTGGCAGTGATGGGTTCTaGCTCTTCCTGGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLGSDGF*LFLGGF
Trigger: GAACCCGCCCAGGAAGAGCCAGAACCCATCACTGCC...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAACTAGCTCCTGGAGGTTaGTCCGACGGCGAACCCGGC +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKLAPGG*SDGEPG
Trigger: GCCGGGTTCGCCGTCGGATCAACCTCCAGGAGCTAG...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTTCCTTCATGGGCAGTaGGTGTGCAGGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLFLHGQ*VCRPLL
Trigger: CAGGAGAGGCCTGCACACTCACTGCCCATGAAGGAA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAACGGGTGACTGTTCATaGCCTACCCTCTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGTGDCS*PTLSCS
Trigger: ACTGCAAGAGAGGGTAGGTCATGAACAGTCACCCGT...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCTAAATGCCAGGATATaGGTGAGCACTGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKLNARI*VSTAES
Trigger: GCTTTCTGCAGTGCTCACTCATATCCTGGCATTTAG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCTTGAAATAATCACCTaGTCAGTCCCATCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKLEIIT*SVPSGG
Trigger: ACCCCCAGATGGGACTGAGCAGGTGATTATTTCAAG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATCTATTGGGCATGATTaGCTCTGTGGGGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGSIGHD*LCGGYS
Trigger: GCTGTAGCCCCCACAGAGGCAATCATGCCCAATAGA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GTCCATGATACAGCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCAGCTCTGGTTTGCATGTaGACGCCAGTGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VHDTARMTRLFVSEGCTSALVCM*TPVPSA
Trigger: TGCAGAAGGCACTGGCGTCCACATGCAAACCAGAGC...TGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGCTGTATCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGTCTTCTTCATTTTCTTaGGGAACGTGGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKSSSFS*GTWLSP
Trigger: TGGGGAGAGCCACGTTCCCCAAGAAAATGAAGAAGA...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTCCCAACTCCTCCCCATaGGCCTCGGGACAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPPNSSP*ASGQGG
Trigger: ACCTCCCTGTCCCGAGGCCCATGGGGAGGAGTTGGG...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCCCCCCTCTTCCTTCATaGGCAGTGAGTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFPPLPS*AVSVQA
Trigger: GGCCTGCACACTCACTGCCCATGAAGGAAGAGGGGG...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGTAATTCCAGCTACTTaGGACGCTGACAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKVIPAT*DADRGE
Trigger: TTCTCCTCTGTCAGCGTCCCAAGTAGCTGGAATTAC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTACTGGGCAGTGCATCTaGCCATCTGCCCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLTGQCI*PSAPWT
Trigger: AGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGT...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTGGGCACTGCCTCTTTaGCTTCCTGCCTTACTGGGC +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLWALPL*LPALLG
Trigger: GCCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGCGAGCTGCCTGTGCTaGGCGCGGAAACTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGASCLC*ARKLPG
Trigger: ACCGGGCAGTTTCCGCGCTCAGCACAGGCAGCTCGC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTTCTGGTTAAATGGTTaGACTGTGTGTGAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: TWDADRGESPEPRRRRLQFWLNG*TVCEAN
Trigger: ATTTGCTTCACACACAGTTCAACCATTTAACCAGAA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGACCAGGGATATTAAAGTaGCTCAAGGAGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGPGILK*LKEAGS
Trigger: GCTTCCTGCCTCCTTGAGTCACTTTAATATCCCTGG...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAGCGGAGAGGCTGGGCTaGCTACCTCTGGAAATCCCC +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKAERLG*LPLEIP
Trigger: GGGGATTTCCAGAGGTAGGCAGCCCAGCCTCTCCGC...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCTGGGCCGCGCTGCTTTaGCCTCCCATCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFWAALL*PPISSC
Trigger: ACAAGAAGAGATGGGAGGGCAAAGCAGCGCGGCCCA...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGAGGTTACTCAGGATCTaGATTTCATCCCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKRLLRI*ISSPVI
Trigger: GATCACTGGGGATGAAATCCAGATCCTGAGTAACCT...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATGGCAACTGCAGTTTTaGAGGCCTCTCCTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGWQLQF*RPLLGD
Trigger: ATCTCCAAGGAGAGGCCTCCAAAACTGCAGTTGCCA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATGGCAGCTGCCTGACTaGGCTCTTTTTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGWQLPD*ALFPLL
Trigger: AAGAAGAGGAAAAAGAGCCCAGTCAGGCAGCTGCCA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCTTTATGGTAAAGTGTaGAGGCACATGTTGCCAACT +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKLYGKV*RHMLPT
Trigger: AGTTGGCAACATGTGCCTTCACACTTTACCATAAAG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTGATGCCAGGAATGGCTaGACACTCTCCAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLDARNG*TLSKQL
Trigger: AAGCTGCTTGGAGAGTGTGCAGCCATTCCTGGCATC...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp CATGATACAGCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATCTGAAGCTCTGGTTTaGATGTGGACGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HDTARMTRLFVSEGCTSQSEALV*MWTPVP
Trigger: AGGCACTGGCGTCCACATGCAAACCAGAGCTTCAGA...TTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGCTGTATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAGAGCAGCCTGACGCATaGCAGGTCCTATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKEQPDA*QVLCTR
Trigger: CCTGGTGCATAGGACCTGGCATGCGTCAGGCTGCTC...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTACACTGGGAATTCCTTaGGCAGGACCACAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLTLGIP*AGPQRA
Trigger: AGCCCTTTGTGGTCCTGCCCAAGGAATTCCCAGTGT...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAAGATGCTCCTTTAGCTaGACACTGTCTTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGRCSFS*TLSLVV
Trigger: GACCACCAAAGACAGTGTCCAGCTAAAGGAGCATCT...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAGTATTTCTGAAGCTCTaGTTTGCATGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGVFLKL*FACGRQ
Trigger: CTGGCGTCCACATGCAAACCAGAGCTTCAGAAATAC...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGGTGTGAGGTCAGCCTaGGCTGGGACTCCACACTAC +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPGVRSA*AGTPHY
Trigger: GTAGTGTGGAGTCCCAGCCCAGGCTGACCTCACACC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CAA 72 bp CTGCCTTACTGGGCAGTGCATCTGGCCATCTGCCCCTaGGACTTTGGACTTTACTTAAGAGAAAACTCAACA +
Preference number: 4 (lower is better)
Translates to: LPYWAVHLAICP*DFGLYLRENST
Trigger: TGTTGAGTTTTCTCTTAAGTAAAGTCCAAAGTCCAAGGGGCAGATGGCCAGATGCACTGCCCAGTAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAAGCTCACTGGTCCCATaGGCTCCTCCAGGATGGATG +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQSSLVP*APPGWM
Trigger: CATCCATCCTGGAGGAGCTCATGGGACCAGTGAGCT...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATCTGGAAGTTCTGGCTaGCTTCATTCACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGSGSSG*LHSPLS
Trigger: AGAAAGAGGTGAATGAAGTCAGCCAGAACTTCCAGA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATCCATCTTCACGGAATaGAGCGGAAGATTCATAAGC +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGSIFTE*SGRFIS
Trigger: GCTTATGAATCTTCCGCTGCATTCCGTGAAGATGGA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCTACCTTGATCTCCTCTaGATTCACACTGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFYLDLL*IHTGRG
Trigger: GCCACGGCCAGTGTGAATGCAGAGGAGATCAAGGTA...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTCTCAAACAATCCTCCTaGCTCAACCACCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLLKQSS*LNHPSS
Trigger: GCTACTTGGGTGGTTGAGGCAGGAGGATTGTTTGAG...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTCACCTTGCCACCGGCTaGAAGAATTCGACATTTAGG +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLHLATG*KNSTFR
Trigger: CCTAAATGTCGAATTCTTCCAGCCGGTGGCAAGGTG...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTACAGCCAGCACGGGTaGCTGTTCATGACCTACCCT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPYSQHG*LFMTYP
Trigger: AGGGTAGGTCATGAACAGTCACCCGTGCTGGCTGTA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCATGCCAGGATATGAGTaGGCACTGCAGAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFMPGYE*ALQKAE
Trigger: CTCTGCTTTCTGCAGTGCTCACTCATATCCTGGCAT...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTGCTGTTCTACTTCAGTaGGCACGTGATTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLAVLLQ*ARDCRK
Trigger: CTTTCTGCAATCACGTGCGCACTGAAGTAGAACAGC...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCATATTGGTATGATCTaGAAAGATGAACTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKHIGMI*KDELLV
Trigger: TACGAGCAGTTCATCTTTGCAGATCATACCAATATG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTATGTCCACAAAGGTTTaGCTCAGTTGCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLMSTKV*LSCSCP
Trigger: AGGGCATGAGCAACTGAGGCAAACCTTTGTGGACAT...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCATTAGCCGGGAATGGTaGCGCATGGCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFISREW*RMAVIP
Trigger: TGGAATTACAGCCATGCGGCACCATTCCCGGCTAAT...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTGCATGCCAGGTCCTATaGACCAGGGATATTAAAGTG +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLACQVL*TRDIKV
Trigger: CACTTTAATATCCCTGGTGCATAGGACCTGGCATGC...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCTGTGAAGGCACATGTTaGCAACTGTTGCACCGACTG +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFCEGTC*QLLHRL
Trigger: CAGTCGGTGCAACAGTTGGCAACATGTGCCTTCACA...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAGGTCTGTCTGAAGAGTaGGCAGGAGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKGLSEE*AGAPPS
Trigger: TGATGGAGGAGCTCCTGCCCACTCTTCAGACAGACC...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTGTGGTCTGGAAGTTCTaGCTGACTTCATTCACCTCT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLVVWKF*LTSFTS
Trigger: AGAGGTGAATGAAGTCAGCCAGAACTTCCAGACCAC...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCACTACCCAGAACTCCTaGCAGAATGGCAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFTTQNS*QNGRSS
Trigger: AGAGCTTCTGCCATTCTGCCAGGAGTTCTGGGTAGT...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAATGGAGCAGAGTCCACTaGTACTTCCACGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQWSRVH*YFHGRC
Trigger: ACAGCGTCCGTGGAAGTACCAGTGGACTCTGCTCCA...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCGGCTGGCGGAGAGGCTaGGCTGCCTACCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSGWRRG*AAYLWK
Trigger: TTTCCAGAGGTAGGCAGCCCAGCCTCTCCGCCAGCC...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAAGGACCACAAAGGGCTaGGTGTTCTCCTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQRTTKG*VFSFSL
Trigger: CAGTGAGAAGGAGAACACTCAGCCCTTTGTGGTCCT...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTCCTGCAGGCGCTCGTaGAGCAGGTTGACTTTAGTA +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPSCRRS*SRLTLV
Trigger: TACTAAAGTCAACCTGCTTCACGAGCGCCTGCAGGA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGACATCTGCAACTGCTCGTATTTCTaGAGCTCTGGTTTGCATGTG +
Preference number: 4 (lower is better)
Translates to: TRLFVSEGCTSQFKCDICNCSYF*SSGLHV
Trigger: CACATGCAAACCAGAGCTTCAGAAATACGAGCAGTT...GCAGATGTCACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR TCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTAAATTGATAGCAGGATaGGTAACAGGCCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLKLIAG*VTGPDS
Trigger: ACTGTCTGGGCCTGTTACTCATCCTGCTATCAATTT...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAGACGCCAGTGCCTTCTaGACAGTGGGAAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQDASAF*TVGSVI
Trigger: AATCACACTTCCCACTGTGCAGAAGGCACTGGCGTC...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTCCGAGATCACACCACTaGACTCCAGCCTTGGCGACA +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGPRSHH*TPALAT
Trigger: TGTCGCCAAGGCTGGAGTGCAGTGGTGTGATCTCGG...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGTGCATCTGGCCATCTaGCCCTTGGACTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPVHLAI*PLDFGL
Trigger: AAGTCCAAAGTCCAAGGGGCAGATGGCCAGATGCAC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAGGAGGCAAGAGGGTCTaGGAAATGCCTGTCAGACAA +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQGGKRV*EMPVRQ
Trigger: TTGTCTGACAGGCATTTCCCAGACCCTCTTGCCTCC...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAACCACCAGATCAATGTaGGGGAATCTGAAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKTTRSM*GNLKRL
Trigger: GAGCCGCTTCAGATTCCCCCACATTGATCTGGTGGT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGTATTTCTGAAGCTCTaGTTTGCATGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: ARMTRLFVSEGCTSQFKCVFLKL*FACGRQ
Trigger: CTGGCGTCCACATGCAAACCAGAGCTTCAGAAATAC...ACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTGGACACACTTTCACTaGGCAAGGCCATGTTATCTT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLWTHFH*ARPCYL
Trigger: AAGATAACATGGCCTTGCCCAGTGAAAGTGTGTCCA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGACTGCCCCTTGGACTTTaGACTTTACTTAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGLPLGL*TLLKRK
Trigger: TTTTCTCTTAAGTAAAGTCCAAAGTCCAAGGGGCAG...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAACTGAGGTTAACACCTTaGCACCGGCTGGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQLRLTP*HRLEEF
Trigger: GAATTCTTCCAGCCGGTGGCAAGGTGTTAACCTCAG...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAACCTTTGTCAGAGCTCTaGATTCCTCCTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKPLSEL*IPPSRH
Trigger: GTGCCTTGAAGGAGGAATGCAGAGCTCTGACAAAGG...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAACTTCTCAATGGCAACTaGAGTTTTGGAGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQLLNGN*SFGGLS
Trigger: GGAGAGGCCTCCAAAACTGCAGTTGCCATTGAGAAG...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp CTGCTGTATTATGAATGTGATCCAATTCCTGGAGACGTAAGCATATGCATTATCGACGCCAGTGCCTTCTaGACAGTGGGAAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: LLYYECDPIPGDVSICIIDASAF*TVGSVI
Trigger: AATCACACTTCCCACTGTGCAGAAGGCACTGGCGTC...GATAATGCATATGCTTACGTCTCCAGGAATTGGATCACATTCATAATACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCGCTCTGATGAGCATGTaGCCGGGAGTCCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSALMSM*PGVLLC
Trigger: ACACAGCAGGACTCCCGGGCACATGCTCATCAGAGC...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTAAGCCTAATTTGGAATaGTTTCAGTCTTACCCAGGC +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLKPNLE*FQSYPG
Trigger: GCCTGGGTAAGACTGAAAGCATTCCAAATTAGGCTT...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGATATTCATTCATTTTGTaGCCTTCTGGGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGYSFIL*PSGNEP
Trigger: TGGTTCATTCCCAGAAGGGCACAAAATGAATGAATA...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp CATGATACAGCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAAATTAAGTGGTTTCCCTaGAGATTCCTTCGTGACAAC +
Preference number: 4 (lower is better)
Translates to: HDTARMTRLFVSEGCTSQIKWFP*RFLRDN
Trigger: GTTGTCACGAAGGAATCTGCAGGGAAACCACTTAAT...TTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGCTGTATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAGCGCCAATGGTGGCTTaGTCTTCAAAAACTGTGACG +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKAPMVA*SSKTVT
Trigger: CGTCACAGTTTTTGAAGACCAAGCCACCATTGGCGC...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGCCCAACACAGTGCGTaGCATGCAGTAACTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPAQHSA*HAVTVQ
Trigger: TTGAACAGTTACTGCATGCCACGCACTGTGTTGGGC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGACATCTGCACACCTGACATTAAGTaGTTTCCCTGCAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: TRLFVSEGCTSQFKCDICTPDIK*FPCRFL
Trigger: AAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGT...GCAGATGTCACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
3UTR CAA 72 bp AACCATGTCTCGAGGTTTTATGCATTTCTAATGGCTTaGCCCATAGGAGAGATACCCAGAGTGGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: NHVSRFYAFLMA*PIGEIPRVANR
Trigger: TCTGTTTGCCACTCTGGGTATCTCTCCTATGGGCAAAGCCATTAGAAATGCATAAAACCTCGAGACATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTACTTCAGTGCGCACGTaGTTGCAGAAAGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGTSVRT*LQKATE
Trigger: CTCTGTGGCTTTCTGCAATCACGTGCGCACTGAAGT...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGTACACGTACTTCACTaGATCCCGAGCTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGVHVLH*IPSSLV
Trigger: GACCAGTGAGCTCGGGATTCAGTGAAGTACGTGTAC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCGCAACTGCTCAAAAGTaGACACTGCATTCTCCATTA +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFATAQK*TLHSPL
Trigger: TAATGGAGAATGCAGTGTTCACTTTTGAGCAGTTGC...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGGAATACTTCGTTACTaGGGGTCTCACTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPGILRY*GSHYPE
Trigger: TTCTGGGTAGTGAGACCCTCAGTAACGAAGTATTCC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTCTGCTTCTCTTCCTCTaGCTCCTGGAATACTTCGTT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPLLLFL*LLEYFV
Trigger: AACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGCAG...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AGCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGCATCTGCTTAAAAGATaGAACCAGCCTCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKNDSPFRFRGLYLTIQMHLLKR*NQPPSK
Trigger: TTTGGAAGGAGGCTGGTTTCATCTTTTAAGCAGATG...CATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTTTTTGGTAACAGCTTaGATGCAACCCCTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLFLVTA*MQPLSV
Trigger: TACACTTAGGGGTTGCATGCAAGCTGTTACCAAAAA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTGCCTCAGTTGCTCATaGCCTGTATGCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPCLSCS*PVCISS
Trigger: AGAGGAAATGCATACAGGGCATGAGCAACTGAGGCA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTTCTGGAGTACATCCTaGCAAATAGTGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPFWSTS*QIVPSP
Trigger: AGGACTGGGCACTATTTGGCAGGATGTACTCCAGAA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTTGTTCTCCTTCTCACTaGAGGCAAGAGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGCSPSH*RQEGLG
Trigger: TCCCAGACCCTCTTGCCTCCAGTGAGAAGGAGAACA...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGCACTAAACCTCTTCTaGTCAGCAGCCTCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGALNLF*SAASWK
Trigger: CTTCCACGAGGCTGCTGACCAGAAGAGGTTTAGTGC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACAATTCATGTCCACAAAGGTTTGCCTCAGTTGCTCATGCCCTGTATGCATTTCTTAGATCTGTTAAGCTaGACACACTTTCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: TIHVHKGLPQLLMPCMHFLDLLS*THFHWA
Trigger: TGCCCAGTGAAAGTGTGTCCAGCTTAACAGATCTAA...GAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAAGACTGGGGGAGAAGTaGTCTTTACTTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQRLGEK*SLLPSP
Trigger: AGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTCT...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAGAGAGATACCCAGAGTaGCAAACAGAGGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQERYPE*QTEAKE
Trigger: TTCCTTAGCCTCTGTTTGCCACTCTGGGTATCTCTC...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTAACTGCTCGTATTTCTaGAGCTCTGGTTTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPNCSYF*SSGLHV
Trigger: CACATGCAAACCAGAGCTTCAGAAATACGAGCAGTT...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTATGATCTGCAAAGATaGACTGCTCGTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLYDLQR*TARISE
Trigger: TTCAGAAATACGAGCAGTTCATCTTTGCAGATCATA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGAATACGGGCTACCTTaGTCTCCTCTGCATTCACAC +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGEYGLP*SPLHSH
Trigger: GTGTGAATGCAGAGGAGATCAAGGTAGCCCGTATTC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTGTCTTGGGGAATTGTaGAACCTTTTGAAATCACTA +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLCLGEL*NLLKSL
Trigger: TAGTGATTTCAAAAGGTTTCACAATTCCCCAAGACA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGCAAGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTCTTTCGGATGGTGCTaGTGTCATAATCATATTGCT +
Preference number: 4 (lower is better)
Translates to: SKNDSPFRFRGLYLTIQMSFGWC*CHNHIA
Trigger: AGCAATATGATTATGACAGCAGCACCATCCGAAAGA...CATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTTCTTCTTTCGGATGGTaGTGCTGTCATAATCATATT +
Preference number: 4 (lower is better)
Translates to: FGNSLHATPKCTPITLWLSSFGW*CCHNHI
Trigger: AATATGATTATGACAGCAGCACCATCCGAAAGAAGA...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp ACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGACATCTGCTCTTCTTTCGGATGGTaGTGCTGTCATAATCATATT +
Preference number: 4 (lower is better)
Translates to: TRLFVSEGCTSQFKCDICSSFGW*CCHNHI
Trigger: AATATGATTATGACAGCAGCACCATCCGAAAGAAGA...GCAGATGTCACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAAAAGGTTTGCCTCAGTTaGTCATGCCCTGTATGCATT +
Preference number: 4 (lower is better)
Translates to: KVVFRHGIPSAWYITETQKVCLS*SCPVCI
Trigger: AATGCATACAGGGCATGAGCAACTGAGGCAAACCTT...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAAAAATCATAGTTCACTaGAGCCTCAACTTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKKIIVH*SLNFPR
Trigger: GCGAGGGAAGTTGAGGCTGCAGTGAACTATGATTTT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCGATGGATGCCAGGAATaGCTGCACACTCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSDGCQE*LHTLQA
Trigger: TGCTTGGAGAGTGTGCAGCCATTCCTGGCATCCATC...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCGCTGGACACTGTCTTTaGTGGTCTGGAAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSAGHCL*WSGSSG
Trigger: GCCAGAACTTCCAGACCACCAAAGACAGTGTCCAGC...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp ACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGACATCTGCATATCTTCTTTCGGATaGTGCTGCTGTCATAATCAT +
Preference number: 4 (lower is better)
Translates to: TRLFVSEGCTSQFKCDICISSFG*CCCHNH
Trigger: ATGATTATGACAGCAGCACCATCCGAAAGAAGATAT...GCAGATGTCACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTCTTCCTCTGACTCCTaGAATACTTCGTTACTGAGG +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPSSSDS*NTSLLR
Trigger: CCTCAGTAACGAAGTATTCCAGGAGTCAGAGGAAGA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTCATTATTCAAGGCTGTaGGTTTCTAGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPHYSRL*VSSRKH
Trigger: GTGCTTCCTGCTAGAAACCCACAGCCTTGAATAATG...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
3UTR CAA 72 bp AAAATTCATCGTAGAACAATTCATGTCCACAAAGGTTaGCCTCAGTTGCTCATGCCCTGTATGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: KIHRRTIHVHKG*PQLLMPCMHFL
Trigger: GAGGAAATGCATACAGGGCATGAGCAACTGAGGCAAACCTTTGTGGACATGAATTGTTCTACGATGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTTTGAGTTCACAATCTaGTCCATGTCAGAACGGATC +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPFEFTI*SMSERI
Trigger: GATCCGTTCTGACATGGATCAGATTGTGAACTCAAA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCACAATTCAAATGTGACATCTGCTTAAAAGATGAAACCAGCCTCCTTCCAAATGCACAGTGGGAAGTGTaGTTTGAACTAGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SQFKCDICLKDETSLLPNAQWEV*FELVPL
Trigger: AAGAGGCACTAGTTCAAATCACACTTCCCACTGTGC...ATTTGGAAGGAGGCTGGTTTCATCTTTTAAGCAGATGTCACATTTGAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR TCA 90 bp ATAATTACACCTGACATTAAGTGGTTTCCCTGCAGATTCCTTCGTGACAACAGAATGATACAGCAAGAATaGCTCGCCTTTTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IITPDIKWFPCRFLRDNRMIQQE*LAFSFQ
Trigger: CTGAAACGAAAAGGCGAGTCATTCTTGCTGTATCAT...TCTGTTGTCACGAAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGTAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp CGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGACATCTGCTTACATATTGGTATGATCTaGAAAGATGAACTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: RLFVSEGCTSQFKCDICLHIGMI*KDELLV
Trigger: TACGAGCAGTTCATCTTTGCAGATCATACCAATATG...TAAGCAGATGTCACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTTGCCCAAGCTGGAGTaGAGTGGTAAAATCATAGTT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPLPKLE*SGKIIV
Trigger: AACTATGATTTTACCACTGCACTCCAGCTTGGGCAA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGCTTCTAAAAAGGCTTaGGCTTCAAATGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPASKKA*ASNVIC
Trigger: GCAGATGACATTTGAAGCCCAAGCCTTTTTAGAAGC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTTACTTCCTTCACCTGTaGTGGGATCCCTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGYFLHL*WDPSKT
Trigger: TGTCTTTGAGGGATCCCACCACAGGTGAAGGAAGTA...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGATCCCTCAAAGACATaGGGATTTAAACACGCCAAG +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGDPSKT*GFKHAK
Trigger: CTTGGCGTGTTTAAATCCTCATGTCTTTGAGGGATC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTCTCTCACCCCAAGTATaGCATTGTCTTTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPLSPQV*HCLCNS
Trigger: AGAATTACAAAGACAATGGCATACTTGGGGTGAGAG...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTCCATGGTATCCCCAGTaGTTGGTATATAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGPWYPQ*LVYNRD
Trigger: GTCTCTGTTATATACCAAGCACTGGGGATACCATGG...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAAAGTCATGGAGTTTTTaGCAAAAACCATGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKKSWSF*QKPCLE
Trigger: CTCGAGACATGGTTTTTGGCAAAAACTCCATGACTT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AGAATGACTCGCCTTTTCGTTTCAGAGGGCTGTACCTCACAATTCAAATGTGACTTCAAATGTGACATCTaGTTAAAAGATGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: RMTRLFVSEGCTSQFKCDFKCDI*LKDETS
Trigger: GCTGGTTTCATCTTTTAAGCAGATGTCACATTTGAA...GTCACATTTGAATTGTGAGGTACAGCCCTCTGAAACGAAAAGGCGAGTCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCAGTTCCAGGCGCCAATaGTGGCTTGGTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSSSRRQ*WLGLQK
Trigger: TTTTTGAAGACCAAGCCACCATTGGCGCCTGGAACT...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCATCTTCTTCCATCACTaGAGCAGAGTCCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSIFFHH*SRVHWY
Trigger: GTACCAGTGGACTCTGCTCCAGTGATGGAAGAAGAT...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp ATAATTACACCTGACATTAAGTGGTTTCCCTGCAGATTCCTTCGTGACAACAGATATGATCTGCAAAGATaGACTGCTCGTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: IITPDIKWFPCRFLRDNRYDLQR*TARISE
Trigger: TTCAGAAATACGAGCAGTTCATCTTTGCAGATCATA...TCTGTTGTCACGAAGGAATCTGCAGGGAAACCACTTAATGTCAGGTGTAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR TCA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAAGAAGATTGCACAATTaGAAAGTGCAGAGTATACTC +
Preference number: 4 (lower is better)
Translates to: NPSFCLLREEPLGETRSKRRLHN*KVQSIL
Trigger: GAGTATACTCTGCACTTTTCAATTGTGCAATCTTCT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTATATCTTCTTTCGGATaGTGCTGCTGTCATAATCAT +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPISSFG*CCCHNH
Trigger: ATGATTATGACAGCAGCACCATCCGAAAGAAGATAT...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CCA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTAGTCTAAGCCTAATTTaGAATGCTTTCAGTCTTACC +
Preference number: 4 (lower is better)
Translates to: LRENSTRAESPIQNVFLPSLSLI*NAFSLT
Trigger: GGTAAGACTGAAAGCATTCCAAATTAGGCTTAGACT...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR TCA 90 bp TCACAATTCAAATGTGACATCTGCTTAAAAGATGAAACCAGCCTCCTTCCAAATAAAGTAAAAGGTCCATaGTACAGCAAGAATGACTCG +
Preference number: 4 (lower is better)
Translates to: SQFKCDICLKDETSLLPNKVKGP*YSKNDS
Trigger: CGAGTCATTCTTGCTGTATCATGGACCTTTTACTTT...ATTTGGAAGGAGGCTGGTTTCATCTTTTAAGCAGATGTCACATTTGAATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCGGTATCCCCAGTGCTTaGTATATAACAGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSGIPSA*YITETQ
Trigger: TTGAGTCTCTGTTATATACCAAGCACTGGGGATACC...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCACACAGTGCGTGGCATaGAGTAACTGTTCAAATAAT +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSTQCVA*SNCSNN
Trigger: ATTATTTGAACAGTTACTGCATGCCACGCACTGTGT...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCTGTTCATCCATCCAATaGAGTGAAAGGTACTCTCTT +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSCSSIQ*SERYSL
Trigger: AAGAGAGTACCTTTCACTGCATTGGATGGATGAACA...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp GTATATAACAGAGACTCAATTAGCTTGCTGAATGACCAAACAAATGATTTCAGCTGTCTCGAGGTTTTATaGATTTCTAATGGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VYNRDSISLLNDQTNDFSCLEVL*ISNGFA
Trigger: GGCAAAGCCATTAGAAATGCATAAAACCTCGAGACA...GCTGAAATCATTTGTTTGGTCATTCAGCAAGCTAATTGAGTCTCTGTTATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTTGCACAATTGAAAAGTaGAGAGTATACTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: NKICKARKLLDKLESYPGCTIEK*RVYSKL
Trigger: CAGTTTTGAGTATACTCTGCACTTTTCAATTGTGCA...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR GCA 90 bp TCACAATTCAAATGTGACATCTGCTTAAAAGATGAAACCAGCCTCCTTCCAAATAGAATAATTGCCCACTaGTGTATTATGAATGTGATC +
Preference number: 4 (lower is better)
Translates to: SQFKCDICLKDETSLLPNRIIAH*CIMNVI
Trigger: GATCACATTCATAATACAGCAGTGGGCAATTATTCT...ATTTGGAAGGAGGCTGGTTTCATCTTTTAAGCAGATGTCACATTTGAATTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS TCA 90 bp AGCTGGCTGGAGGCTGAGCCGCCCATGACCGCGAGCTGCCTGTGCTaGGCGCGGAAACTGCCCGGTCCGCGCCCGCTGCTAGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SWLEAEPPMTASCLC*ARKLPGPRPLLAPG
Trigger: TCCAGGAGCTAGCAGCGGGCGCGGACCGGGCAGTTTCCGCGCTCAGCACAGGCAGCTCGCGGTCATGGGCGGCTCAGCCTCCAGCCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTCATCTGGGGGTGGGCTaGGCCCAGGGAGAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCHLGVG*AQGEKG
Trigger: GCCTTTCTCTCCCTGGGCCAAGCCCACCCCCAGATG...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGCTGGGCCGCGCTGCTTaGCCCTCCCATCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWLGRAA*PSHLFL
Trigger: CAAGAAGAGATGGGAGGGCAAAGCAGCGCGGCCCAG...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp GCGCGGAAACTGCCCGGTCCGCGCCCGCTGCTAGCTCCTGGAGGTTaGTCCGACGGCGAACCCGGCTCTGAAATTAAGAGCAAACTTCCT +
Preference number: 5 (lower is better)
Translates to: ARKLPGPRPLLAPGG*SDGEPGSEIKSKLP
Trigger: AGGAAGTTTGCTCTTAATTTCAGAGCCGGGTTCGCCGTCGGATCAACCTCCAGGAGCTAGCAGCGGGCGCGGACCGGGCAGTTTCCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CCA 90 bp CGAGCTCACTGGTCCCATGAGCTCCTCCAGGATGGATGCCAGGAATaGCTGCACACTCTCCAAGCAGCTTTTCTCCGCCGGCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RAHWSHELLQDGCQE*LHTLQAAFLRRLGH
Trigger: GTGGCCCAGCCGGCGGAGAAAAGCTGCTTGGAGAGTGTGCAGCCATTCCTGGCATCCATCCTGGAGGAGCTCATGGGACCAGTGAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGGCTAGCTCCTGGAGGTaGATCCGACGGCGAACCCGG +
Preference number: 5 (lower is better)
Translates to: TWDADRGESPEPRRRRLQASSWR*IRRRTR
Trigger: CCGGGTTCGCCGTCGGATCAACCTCCAGGAGCTAGC...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS GCA 90 bp CTCACTGGTCCCATGAGCTCCTCCAGGATGGATGCCAGGAATGGCTaGACACTCTCCAAGCAGCTTTTCTCCGCCGGCTGGGCCACCATC +
Preference number: 5 (lower is better)
Translates to: LTGPMSSSRMDARNG*TLSKQLFSAGWATI
Trigger: GATGGTGGCCCAGCCGGCGGAGAAAAGCTGCTTGGAGAGTGTGCAGCCATTCCTGGCATCCATCCTGGAGGAGCTCATGGGACCAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS GCA 90 bp CACCACCCACTGACACTCATGAATACGGGCTACCTTGATCTCCTCTaGATTCACACTGGCCGTGGCCTGGGCCGCGCTGCTTTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HHPLTLMNTGYLDLL*IHTGRGLGRAALPS
Trigger: GGAGGGCAAAGCAGCGCGGCCCAGGCCACGGCCAGTGTGAATGCAGAGGAGATCAAGGTAGCCCGTATTCATGAGTGTCAGTGGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp GCCGCGCTGCTTTGCCCTCCCATCTCTTCTTGTTCCTCAGAAACCTaGCTCTCACTGAGGCAGATGGGGTCAGAACCTAAGGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: AALLCPPISSCSSET*LSLRQMGSEPKVQP
Trigger: GGGCTGCACCTTAGGTTCTGACCCCATCTGCCTCAGTGAGAGCCAGGTTTCTGAGGAACAAGAAGAGATGGGAGGGCAAAGCAGCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTAGCTGGACACTGTCTTaGGTGGTCTGGAAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCSWTLS*VVWKFW
Trigger: CCAGAACTTCCAGACCACCAAAGACAGTGTCCAGCT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGAATCTGAAGCGGCTCTaGAGATCCTGCAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: TWDADRGESPEPRRRRLQNLKRL*RSCRRS
Trigger: CGAGCGCCTGCAGGATCTCAAGAGCCGCTTCAGATT...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS GCA 90 bp GCCACAGGATTCACCACGGGGTCATCCACTCTTGAAATAATCACCTaGTCAGTCCCATCTGGGGGTGGGCTTGGCCCAGGGAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: ATGFTTGSSTLEIIT*SVPSGGGLGPGRER
Trigger: CCTTTCTCTCCCTGGGCCAAGCCCACCCCCAGATGGGACTGAGCAGGTGATTATTTCAAGAGTGGATGACCCCGTGGTGAATCCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp AGCGCCTTCAAAGAACCCGAGGCAGTGATGGGTTCTGGCTCTTCCTaGGCGGGTTCTTCATCCTCAAGGGTCCCTCCAAACTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SAFKEPEAVMGSGSS*AGSSSSRVPPNSSS
Trigger: AGAGCTGGAGTTTGGAGGGACCCTTGAGGATGAAGAACCCGCCCAGGAAGAGCCAGAACCCATCACTGCCTCGGGTTCTTTGAAGGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp ATACGGGCTACCTTGATCTCCTCTGCATTCACACTGGCCGTGGCCTaGGCCGCGCTGCTTTGCCCTCCCATCTCTTCTTGTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: IRATLISSAFTLAVA*AALLCPPISSCSSE
Trigger: TTCTGAGGAACAAGAAGAGATGGGAGGGCAAAGCAGCGCGGCCCAGGCCACGGCCAGTGTGAATGCAGAGGAGATCAAGGTAGCCCGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTACACTGGGAATTCCTaGGGCAGGACCACAAAGGGC +
Preference number: 5 (lower is better)
Translates to: TWDADRGESPEPRRRRLQYTGNS*GRTTKG
Trigger: GCCCTTTGTGGTCCTGCCCAAGGAATTCCCAGTGTA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGCAGGACATCCGGGTTaGGAGCATCCTCCACCACCC +
Preference number: 5 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKAGHPG*EHPPPP
Trigger: GGGTGGTGGAGGATGCTCCAAACCCGGATGTCCTGC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTGTAATCCCAGCACTTaGGGAAGTCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TWDADRGESPEPRRRRLQCNPST*GSRGGW
Trigger: CCACCCACCTCGACTTCCCAAAGTGCTGGGATTACA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp ACCTCTTCTGGTCAGCAGCCTCGTGGAAGCAGAAGTAGCCGTGTCTaGAGAAGGGCTGCCACAGGTACACTGGGAATTCCTTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: TSSGQQPRGSRSSRV*RRAATGTLGIPWAG
Trigger: TCCTGCCCAAGGAATTCCCAGTGTACCTGTGGCAGCCCTTCTTCAGACACGGCTACTTCTGCTTCCACGAGGCTGCTGACCAGAAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp TGTGTCCTCTGTTGCCACAGGATTCACCACGGGGTCATCCACTCTTaGAATAATCACCTGCTCAGTCCCATCTGGGGGTGGGCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: CVLCCHRIHHGVIHS*NNHLLSPIWGWAWP
Trigger: GGGCCAAGCCCACCCCCAGATGGGACTGAGCAGGTGATTATTTCAAGAGTGGATGACCCCGTGGTGAATCCTGTGGCAACAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS GCA 90 bp CTTCATCCTCAAGGGTCCCTCCAAACTCCAGCTCTGATGAGCATGTaGCCGGGAGTCCTGCTGTGTCCTCTGTTGCCACAGGATTCACCA +
Preference number: 5 (lower is better)
Translates to: LHPQGSLQTPALMSM*PGVLLCPLLPQDSP
Trigger: TGGTGAATCCTGTGGCAACAGAGGACACAGCAGGACTCCCGGGCACATGCTCATCAGAGCTGGAGTTTGGAGGGACCCTTGAGGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp TCAGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTAAAGGTTTGCCTCAGTaGCTCATGCCCTGTATGCAT +
Preference number: 5 (lower is better)
Translates to: SAWAGTPHYCPRESGSLCKGLPQ*LMPCMH
Trigger: ATGCATACAGGGCATGAGCAACTGAGGCAAACCTTT...ACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp GAAACTCTCCTGACCACCTTCTCCCTCCTTCACGTCATCTTTGTGTaGCAGCAGGACATCCGGGTTTGGAGCATCCTCCACCACCCACTG +
Preference number: 5 (lower is better)
Translates to: ETLLTTFSLLHVIFV*QQDIRVWSILHHPL
Trigger: CAGTGGGTGGTGGAGGATGCTCCAAACCCGGATGTCCTGCTGTCACACAAAGATGACGTGAAGGAGGGAGAAGGTGGTCAGGAGAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp CAACTTTCTGAGCGCCTTCAAAGAACCCGAGGCAGTGATGGGTTCTaGCTCTTCCTGGGCGGGTTCTTCATCCTCAAGGGTCCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: QLSERLQRTRGSDGF*LFLGGFFILKGPSK
Trigger: TTTGGAGGGACCCTTGAGGATGAAGAACCCGCCCAGGAAGAGCCAGAACCCATCACTGCCTCGGGTTCTTTGAAGGCGCTCAGAAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCCTTCCTCGGTACACTaGCCCCCTCTTCCTTCATGG +
Preference number: 5 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKPSSVH*PPLPSW
Trigger: CCATGAAGGAAGAGGGGGCAAGTGTACCGAGGAAGG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp ACTTGGGACGCTGACAGAGGAGAATCTCCTGAACCCAGGAGGCGGAGGTTGCAGTCCTTCACGTCATCTTaGTGTGACAGCAGGACATCC +
Preference number: 5 (lower is better)
Translates to: TWDADRGESPEPRRRRLQSFTSS*CDSRTS
Trigger: GGATGTCCTGCTGTCACACAAAGATGACGTGAAGGA...CTGCAACCTCCGCCTCCTGGGTTCAGGAGATTCTCCTCTGTCAGCGTCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGAAGGCCAGAAAGCTTTaGGACAAGTTGGAATCTTAC +
Preference number: 5 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWKARKL*DKLESY
Trigger: GTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGACATGTTGCCAACTGTaGCACCGACTGATACTATTA +
Preference number: 5 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWTCCQL*HRLILL
Trigger: TAATAGTATCAGTCGGTGCAACAGTTGGCAACATGT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGGAAAGGCTTTCTCCTTaGGCCAACGAGCTAGGGACC +
Preference number: 5 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKERLSP*ANELGT
Trigger: GGTCCCTAGCTCGTTGGCCAAAGGAGAAAGCCTTTC...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp CCTCAGGCTGCTTCTCTTCCTCTGACTCCTGGAATACTTCGTTACTaGGGGTCTCACTACCCAGAACTCCTGGCAGAATGGCAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PQAASLPLTPGILRY*GSHYPELLAEWQKL
Trigger: GAGCTTCTGCCATTCTGCCAGGAGTTCTGGGTAGTGAGACCCTCAGTAACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGCAGCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 90 bp TCCTTTGGCCAACGAGCTAGGGACCTCAGGCTGCTTCTCTTCCTCTaGCTCCTGGAATACTTCGTTACTGAGGGTCTCACTACCCAGAAC +
Preference number: 5 (lower is better)
Translates to: SFGQRARDLRLLLFL*LLEYFVTEGLTTQN
Trigger: GTTCTGGGTAGTGAGACCCTCAGTAACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGCAGCCTGAGGTCCCTAGCTCGTTGGCCAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 90 bp AATTGTCCCTTTCACTCCTCTGAGGGCAGCTCTGGGAAACTCTCCTaGCCACCTTCTCCCTCCTTCACGTCATCTTTGTGTGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: NCPFHSSEGSSGKLS*PPSPSFTSSLCDSR
Trigger: CCTGCTGTCACACAAAGATGACGTGAAGGAGGGAGAAGGTGGTCAGGAGAGTTTCCCAGAGCTGCCCTCAGAGGAGTGAAAGGGACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp CTCTTTCTCAAAGAGTACACGTACTTCACTGAATCCCGAGCTCACTaGTCCCATGAGCTCCTCCAGGATGGATGCCAGGAATGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LFLKEYTYFTESRAH*SHELLQDGCQEWLH
Trigger: GTGCAGCCATTCCTGGCATCCATCCTGGAGGAGCTCATGGGACCAGTGAGCTCGGGATTCAGTGAAGTACGTGTACTCTTTGAGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp GCTCTCCCCATTCGTATCTTCTTCCATCACTGGAGCAGAGTCCACTaGTACTTCCACGGACGCTGTCAGCAACTTTCTGAGCGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: ALPIRIFFHHWSRVH*YFHGRCQQLSERLQ
Trigger: TTGAAGGCGCTCAGAAAGTTGCTGACAGCGTCCGTGGAAGTACCAGTGGACTCTGCTCCAGTGATGGAAGAAGATACGAATGGGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 90 bp TTCTTGGGGAACGTGGCTCTCCCCATTCGTATCTTCTTCCATCACTaGAGCAGAGTCCACTGGTACTTCCACGGACGCTGTCAGCAACTT +
Preference number: 5 (lower is better)
Translates to: FLGNVALPIRIFFHH*SRVHWYFHGRCQQL
Trigger: AAGTTGCTGACAGCGTCCGTGGAAGTACCAGTGGACTCTGCTCCAGTGATGGAAGAAGATACGAATGGGGAGAGCCACGTTCCCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGACTCCTTTTAATCTTTaGGAAGCAAGTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWTPFNL*EASLFH
Trigger: ATGGAAGAGACTTGCTTCCAAAAGATTAAAAGGAGT...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AGCCTGGGCTGGGACTCCACACTACTGTCCCAGGGAGTCGGGCAGCCTTTGTGGGAACGAAAATCACTTTaGTCTTGGGGAATTGTGAAA +
Preference number: 5 (lower is better)
Translates to: SLGWDSTLLSQGVGQPLWERKSL*SWGIVK
Trigger: TTTCACAATTCCCCAAGACAAAAGTGATTTTCGTTC...CCACAAAGGCTGCCCGACTCCCTGGGACAGTAGTGTGGAGTCCCAGCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS GCA 90 bp AGAGAAAGGCTTTCTCCTTTGGCCAACGAGCTAGGGACCTCAGGCTaGTTCTCTTCCTCTGACTCCTGGAATACTTCGTTACTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RERLSPLANELGTSG*FSSSDSWNTSLLRV
Trigger: GACCCTCAGTAACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGCAGCCTGAGGTCCCTAGCTCGTTGGCCAAAGGAGAAAGCCTTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGCTGGCCATCTGCCCCTaGGACTTTGGACTTTACTTA +
Preference number: 5 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKLAICP*DFGLYL
Trigger: TAAGTAAAGTCCAAAGTCCAAGGGGCAGATGGCCAG...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAATGGCAACTGCAGTTTaGGAGGCCTCTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGMATAV*EASPWR
Trigger: TCTCCAAGGAGAGGCCTCCAAAACTGCAGTTGCCAT...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTCTGCTGTGTCCTCTGTaGCCACAGGATTCACCACGG +
Preference number: 5 (lower is better)
Translates to: FGNSLHATPKCTPITLWLLLCPL*PQDSPR
Trigger: CCGTGGTGAATCCTGTGGCAACAGAGGACACAGCAG...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp TGGAGGCCTCTCCTTGGAGATGTGGGGAAAGCAACTGCTCAAAAGTaGACACTGCATTCTCCATTAGCTCCTGCATGTAGTTCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: WRPLLGDVGKATAQK*TLHSPLAPACSSVS
Trigger: GGACACAGAACTACATGCAGGAGCTAATGGAGAATGCAGTGTTCACTTTTGAGCAGTTGCTTTCCCCACATCTCCAAGGAGAGGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 90 bp CTGGTTTGCATGTGGACGCCAGTGCCTTCTGCACAGTGGGAAGTGTaGTTTGAACTAGTGCCTCTTGAAATATCTTCTTTCGGATGGTGC +
Preference number: 5 (lower is better)
Translates to: LVCMWTPVPSAQWEV*FELVPLEISSFGWC
Trigger: GCACCATCCGAAAGAAGATATTTCAAGAGGCACTAGTTCAAATCACACTTCCCACTGTGCAGAAGGCACTGGCGTCCACATGCAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367511.4
ENST00000417056.5
ENST00000487074.5
CDS GCA 90 bp CCATGTCAGAACGGATCGTTCCTTCCAGGCCCTTTGTCAGAGCTCTaGATTCCTCCTTCAAGGCACTTAATCCTTCTGAAACTTGATGCT +
Preference number: 5 (lower is better)
Translates to: PCQNGSFLPGPLSEL*IPPSRHLILLKLDA
Trigger: AGCATCAAGTTTCAGAAGGATTAAGTGCCTTGAAGGAGGAATGCAGAGCTCTGACAAAGGGCCTGGAAGGAACGATCCGTTCTGACATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTCCCTCCCATCTCTTCTaGTTCCTCAGAAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: FGNSLHATPKCTPITLWLPSHLF*FLRNLA
Trigger: AGCCAGGTTTCTGAGGAACAAGAAGAGATGGGAGGG...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp CACCAGAAAGGAACTTGGCAGGGAGGGGCTTTGTCTGGTAAGATGTaGAAATGGGTGCTTTGCTTTCATTGCTCCTTCCTAACTTCCAAC +
Preference number: 5 (lower is better)
Translates to: HQKGTWQGGALSGKM*KWVLCFHCSFLTSN
Trigger: GTTGGAAGTTAGGAAGGAGCAATGAAAGCAAAGCACCCATTTTCACATCTTACCAGACAAAGCCCCTCCCTGCCAAGTTCCTTTCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461167.1
CDS-3UTR CAA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGACTTCTCTTGAATCTATaGGGCATGATTGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGLLLNL*GMIASV
Trigger: CACAGAGGCAATCATGCCCAATAGATTCAAGAGAAG...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AGTGACTCAAGGAGGCAGGAAGCCATTATTCAAGGCTGTGGGTTTCTAGCAGGAGAGGAAGGAACAAAGTaGTTTTTCGCCATGGTATCC +
Preference number: 5 (lower is better)
Translates to: SDSRRQEAIIQGCGFLAGEEGTK*FFAMVS
Trigger: GGATACCATGGCGAAAAACAACTTTGTTCCTTCCTC...TCCTGCTAGAAACCCACAGCCTTGAATAATGGCTTCCTGCCTCCTTGAGTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp GACTGGGGGAGAAGTGGTCTTTACTTCCTTCACCTGTGGTGGGATCCCTCAAAGTTGAGAGCATACACCTaGGCTTTTGTCTTTATTCAT +
Preference number: 5 (lower is better)
Translates to: DWGRSGLYFLHLWWDPSKLRAYT*AFVFIH
Trigger: ATGAATAAAGACAAAAGCCAAGGTGTATGCTCTCAA...CTTTGAGGGATCCCACCACAGGTGAAGGAAGTAAAGACCACTTCTCCCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTCTGGGCACTGCCTCTTaGGCTTCCTGCCTTACTGGG +
Preference number: 5 (lower is better)
Translates to: NKICKARKLLDKLESYPGLGTAS*ASCLTG
Trigger: CCCAGTAAGGCAGGAAGCCAAAGAGGCAGTGCCCAG...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CCA 90 bp AGATGCTCCTTTAGCTGGACACTGTCTTTGGTGGTCTGGAAGTTCTaGCTGACTTCATTCACCTCTTTCTCAAAGAGTACACGTACTTCA +
Preference number: 5 (lower is better)
Translates to: RCSFSWTLSLVVWKF*LTSFTSFSKSTRTS
Trigger: TGAAGTACGTGTACTCTTTGAGAAAGAGGTGAATGAAGTCAGCCAGAACTTCCAGACCACCAAAGACAGTGTCCAGCTAAAGGAGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS-3UTR CAA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTGGCGCCAATGGTGGCTaGGTCTTCAAAAACTGTGAC +
Preference number: 5 (lower is better)
Translates to: LRENSTRAESPIQNVFLPGANGG*VFKNCD
Trigger: GTCACAGTTTTTGAAGACCAAGCCACCATTGGCGCC...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AAAGTTGTTTTTCGCCATGGTATCCCCAGTGCTTGGTATATAACAGAGACTCAACATGTCCACAAAGGTTaGCCTCAGTTGCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: KVVFRHGIPSAWYITETQHVHKG*PQLLMP
Trigger: GGGCATGAGCAACTGAGGCAAACCTTTGTGGACATG...TTGAGTCTCTGTTATATACCAAGCACTGGGGATACCATGGCGAAAAACAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTTTCTTCTTCATTTTCTaGGGGAACGTGGCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LRENSTRAESPIQNVFLPFFFIF*GNVALP
Trigger: GGGGAGAGCCACGTTCCCCAAGAAAATGAAGAAGAA...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AACCCTAGTTTCTGTCTTTTAAGAGAGGAGCCACTTGGAGAGACAAGAAGTAAAATGACCTACCCTCTCTaGCAGTCTGACTGTGGACAA +
Preference number: 5 (lower is better)
Translates to: NPSFCLLREEPLGETRSKMTYPL*QSDCGQ
Trigger: TTGTCCACAGTCAGACTGCAAGAGAGGGTAGGTCAT...TTTACTTCTTGTCTCTCCAAGTGGCTCCTCTCTTAAAAGACAGAAACTAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS GCA 90 bp TCTTCAAAAACTGTGACGTTAAATCTCTTTGCTGTTCTACTTCAGTaGGCACGTGATTGCAGAAAGCCACAGAGTACTGACGACTGTAGT +
Preference number: 5 (lower is better)
Translates to: SSKTVTLNLFAVLLQ*ARDCRKPQSTDDCS
Trigger: ACTACAGTCGTCAGTACTCTGTGGCTTTCTGCAATCACGTGCGCACTGAAGTAGAACAGCAAAGAGATTTAACGTCACAGTTTTTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp TTTGGTAACAGCTTGCATGCAACCCCTAAGTGTACCCCTATAACCCTTTGGCTTAGGATGAACATTTTATaGGAATATAGGCACCTGGCA +
Preference number: 5 (lower is better)
Translates to: FGNSLHATPKCTPITLWLRMNIL*EYRHLA
Trigger: TGCCAGGTGCCTATATTCCAATAAAATGTTCATCCT...AAGCCAAAGGGTTATAGGGGTACACTTAGGGGTTGCATGCAAGCTGTTACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTTCTGAGGTTAACACCTaGCCACCGGCTGGAAGAATT +
Preference number: 5 (lower is better)
Translates to: NKICKARKLLDKLESYPGSEVNT*PPAGRI
Trigger: AATTCTTCCAGCCGGTGGCAAGGTGTTAACCTCAGA...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 90 bp CATAGACATTTTCAACGTGAATCATATTGGTATGATCTGCAAAGATaGACTGCTCGTATTTCTGAAGCTCTGGTTTGCATGTGGACGCCA +
Preference number: 5 (lower is better)
Translates to: HRHFQRESYWYDLQR*TARISEALVCMWTP
Trigger: TGGCGTCCACATGCAAACCAGAGCTTCAGAAATACGAGCAGTTCATCTTTGCAGATCATACCAATATGATTCACGTTGAAAATGTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367511.4
ENST00000417056.5
ENST00000487074.5
CDS TCA 90 bp CCAGCCTCCTTCCAAATAAATGACATCTGGTCAGCTCTTCAAGGATaGACATTTTATTGGAATATAGGCACCTTTCAGAGTTTCATCAAG +
Preference number: 5 (lower is better)
Translates to: PASFQINDIWSALQG*TFYWNIGTFQSFIK
Trigger: CTTGATGAAACTCTGAAAGGTGCCTATATTCCAATAAAATGTTCATCCTTGAAGAGCTGACCAGATGTCATTTATTTGGAAGGAGGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CAA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTCAGTCTAAGCCTAATTaGGAATGCTTTCAGTCTTAC +
Preference number: 5 (lower is better)
Translates to: LRENSTRAESPIQNVFLPQSKPN*ECFQSY
Trigger: GTAAGACTGAAAGCATTCCAAATTAGGCTTAGACTG...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTTGTAAGGATGAGATCTaGCTATGTTTCCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: NKICKARKLLDKLESYPGCKDEI*LCFPGL
Trigger: CAAGCCTGGGAAACATAGCAAGATCTCATCCTTACA...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS-3UTR CAA 90 bp TTAAGAGAAAACTCAACAAGGGCAGAAAGCCCAATTCAAAACGTCTTTCTGCCTAAAGTCATGGAGTTTTaGCCAAAAACCATGTCTCGA +
Preference number: 5 (lower is better)
Translates to: LRENSTRAESPIQNVFLPKVMEF*PKTMSR
Trigger: TCGAGACATGGTTTTTGGCAAAAACTCCATGACTTT...AGGCAGAAAGACGTTTTGAATTGGGCTTTCTGCCCTTGTTGAGTTTTCTCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS GCA 90 bp AATCTCCTCATAGACATTTTCAACGTGAATCATATTGGTATGATCTaGAAAGATGAACTGCTCGTATTTCTGAAGCTCTGGTTTGCATGT +
Preference number: 5 (lower is better)
Translates to: NLLIDIFNVNHIGMI*KDELLVFLKLWFAC
Trigger: ACATGCAAACCAGAGCTTCAGAAATACGAGCAGTTCATCTTTGCAGATCATACCAATATGATTCACGTTGAAAATGTCTATGAGGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367511.4
ENST00000417056.5
ENST00000487074.5
CDS TCA 90 bp TGTGACATCTGCTTAAAAGATGAAACCAGCCTCCTTCCAAATAAATaGCATCTGGTCAGCTCTTCAAGGATGAACATTTTATTGGAATAT +
Preference number: 5 (lower is better)
Translates to: CDICLKDETSLLPNK*HLVSSSRMNILLEY
Trigger: ATATTCCAATAAAATGTTCATCCTTGAAGAGCTGACCAGATGTCATTTATTTGGAAGGAGGCTGGTTTCATCTTTTAAGCAGATGTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS-3UTR CAA 90 bp AATAAAATATGTAAGGCCAGAAAGCTTTTGGACAAGTTGGAATCTTACCCTGGTGCCAATAAAATTTTCTaGCCTCATCTGAATTTCCTG +
Preference number: 5 (lower is better)
Translates to: NKICKARKLLDKLESYPGANKIF*PHLNFL
Trigger: CAGGAAATTCAGATGAGGCAAGAAAATTTTATTGGC...ACCAGGGTAAGATTCCAACTTGTCCAAAAGCTTTCTGGCCTTACATATTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 72 bp GAGGCTGAGCCGCCCATGACCGCGAGCTGCCTGTGCTaGGCGCGGAAACTGCCCGGTCCGCGCCCGCTGCTA +
Preference number: 6 (lower is better)
Translates to: EAEPPMTASCLC*ARKLPGPRPLL
Trigger: TAGCAGCGGGCGCGGACCGGGCAGTTTCCGCGCTCAGCACAGGCAGCTCGCGGTCATGGGCGGCTCAGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CCA 72 bp GGGCCCCAGGGGCTCCTCGGTGAGCCCTCCACTGGCTaGCGGAGAGGCTGGGCTGCCTACCTCTGGAAATCC +
Preference number: 6 (lower is better)
Translates to: GPQGLLGEPSTG*RRGWAAYLWKS
Trigger: GGATTTCCAGAGGTAGGCAGCCCAGCCTCTCCGCCAGCCAGTGGAGGGCTCACCGAGGAGCCCCTGGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp CTGCCCGGTCCGCGCCCGCTGCTAGCTCCTGGAGGTTaGTCCGACGGCGAACCCGGCTCTGAAATTAAGAGC +
Preference number: 6 (lower is better)
Translates to: LPGPRPLLAPGG*SDGEPGSEIKS
Trigger: GCTCTTAATTTCAGAGCCGGGTTCGCCGTCGGATCAACCTCCAGGAGCTAGCAGCGGGCGCGGACCGGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 72 bp GGGCCTCGGGACAGGGAGGTTGGGCCTCCCTCTCGCTaGCTTCACTTTCTTCACAGTTGTCGGGGTGGATGG +
Preference number: 6 (lower is better)
Translates to: GPRDREVGPPSR*LHFLHSCRGGW
Trigger: CCATCCACCCCGACAACTGTGAAGAAAGTGAAGTCAGCGAGAGGGAGGCCCAACCTCCCTGTCCCGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 72 bp CCCAACTCCTCCCCATGGGCCTCGGGACAGGGAGGTTaGGCCTCCCTCTCGCTGACTTCACTTTCTTCACAG +
Preference number: 6 (lower is better)
Translates to: PNSSPWASGQGG*ASLSLTSLSSQ
Trigger: CTGTGAAGAAAGTGAAGTCAGCGAGAGGGAGGCCCAACCTCCCTGTCCCGAGGCCCATGGGGAGGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CAA 90 bp AAGGTGCAGCCCTCTTGCTGTGAGGCATCCCCTTCCTCGGTACACTaGCCCCCTCTTCCTTCATGGGCAGTGAGTGTGCAGGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: KVQPSCCEASPSSVH*PPLPSWAVSVQASP
Trigger: AGGAGAGGCCTGCACACTCACTGCCCATGAAGGAAGAGGGGGCAAGTGTACCGAGGAAGGGGATGCCTCACAGCAAGAGGGCTGCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS GCA 72 bp CAAGGGTCCCTCCAAACTCCAGCTCTGATGAGCATGTaGCCGGGAGTCCTGCTGTGTCCTCTGTTGCCACAG +
Preference number: 6 (lower is better)
Translates to: QGSLQTPALMSM*PGVLLCPLLPQ
Trigger: CTGTGGCAACAGAGGACACAGCAGGACTCCCGGGCACATGCTCATCAGAGCTGGAGTTTGGAGGGACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS GCA 72 bp CTGACACTCATGAATACGGGCTACCTTGATCTCCTCTaGATTCACACTGGCCGTGGCCTGGGCCGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: LTLMNTGYLDLL*IHTGRGLGRAA
Trigger: AGCAGCGCGGCCCAGGCCACGGCCAGTGTGAATGCAGAGGAGATCAAGGTAGCCCGTATTCATGAGTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 72 bp TGGTCCCATGAGCTCCTCCAGGATGGATGCCAGGAATaGCTGCACACTCTCCAAGCAGCTTTTCTCCGCCGG +
Preference number: 6 (lower is better)
Translates to: WSHELLQDGCQE*LHTLQAAFLRR
Trigger: CCGGCGGAGAAAAGCTGCTTGGAGAGTGTGCAGCCATTCCTGGCATCCATCCTGGAGGAGCTCATGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 72 bp ACCTTGATCTCCTCTGCATTCACACTGGCCGTGGCCTaGGCCGCGCTGCTTTGCCCTCCCATCTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: TLISSAFTLAVA*AALLCPPISSC
Trigger: ACAAGAAGAGATGGGAGGGCAAAGCAGCGCGGCCCAGGCCACGGCCAGTGTGAATGCAGAGGAGATCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CAA 72 bp CCCTCTTGCTGTGAGGCATCCCCTTCCTCGGTACACTaGCCCCCTCTTCCTTCATGGGCAGTGAGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: PSCCEASPSSVH*PPLPSWAVSVQ
Trigger: CTGCACACTCACTGCCCATGAAGGAAGAGGGGGCAAGTGTACCGAGGAAGGGGATGCCTCACAGCAAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS GCA 72 bp TTCACCACGGGGTCATCCACTCTTGAAATAATCACCTaGTCAGTCCCATCTGGGGGTGGGCTTGGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: FTTGSSTLEIIT*SVPSGGGLGPG
Trigger: CCCTGGGCCAAGCCCACCCCCAGATGGGACTGAGCAGGTGATTATTTCAAGAGTGGATGACCCCGTGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 72 bp GAGCGCCTTCAAAGAACCCGAGGCAGTGATGGGTTCTaGCTCTTCCTGGGCGGGTTCTTCATCCTCAAGGGT +
Preference number: 6 (lower is better)
Translates to: ERLQRTRGSDGF*LFLGGFFILKG
Trigger: ACCCTTGAGGATGAAGAACCCGCCCAGGAAGAGCCAGAACCCATCACTGCCTCGGGTTCTTTGAAGGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CAA 72 bp ATGAGCATGTGCCCGGGAGTCCTGCTGTGTCCTCTGTaGCCACAGGATTCACCACGGGGTCATCCACTCTTG +
Preference number: 6 (lower is better)
Translates to: MSMCPGVLLCPL*PQDSPRGHPLL
Trigger: CAAGAGTGGATGACCCCGTGGTGAATCCTGTGGCAACAGAGGACACAGCAGGACTCCCGGGCACATGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp GGTCAGCAGCCTCGTGGAAGCAGAAGTAGCCGTGTCTaGAGAAGGGCTGCCACAGGTACACTGGGAATTCCT +
Preference number: 6 (lower is better)
Translates to: GQQPRGSRSSRV*RRAATGTLGIP
Trigger: AGGAATTCCCAGTGTACCTGTGGCAGCCCTTCTTCAGACACGGCTACTTCTGCTTCCACGAGGCTGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CCA 72 bp GTAGCCGTGTCTGAAGAAGGGCTGCCACAGGTACACTaGGAATTCCTTGGGCAGGACCACAAAGGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: VAVSEEGLPQVH*EFLGQDHKGLS
Trigger: ACTCAGCCCTTTGTGGTCCTGCCCAAGGAATTCCCAGTGTACCTGTGGCAGCCCTTCTTCAGACACGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CCA 72 bp TACTTCGTTACTGAGGGTCTCACTACCCAGAACTCCTaGCAGAATGGCAGAAGCTCTCCTGGCAGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: YFVTEGLTTQNS*QNGRSSPGRAG
Trigger: GCCAGCCCTGCCAGGAGAGCTTCTGCCATTCTGCCAGGAGTTCTGGGTAGTGAGACCCTCAGTAACGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 72 bp AAAGAACCCGAGGCAGTGATGGGTTCTGGCTCTTCCTaGGCGGGTTCTTCATCCTCAAGGGTCCCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: KEPEAVMGSGSS*AGSSSSRVPPN
Trigger: GTTTGGAGGGACCCTTGAGGATGAAGAACCCGCCCAGGAAGAGCCAGAACCCATCACTGCCTCGGGTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp CTGACCACCTTCTCCCTCCTTCACGTCATCTTTGTGTaGCAGCAGGACATCCGGGTTTGGAGCATCCTCCAC +
Preference number: 6 (lower is better)
Translates to: LTTFSLLHVIFV*QQDIRVWSILH
Trigger: GTGGAGGATGCTCCAAACCCGGATGTCCTGCTGTCACACAAAGATGACGTGAAGGAGGGAGAAGGTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CAA 90 bp CTCCCTCCTTCACGTCATCTTTGTGTGACAGCAGGACATCCGGGTTaGGAGCATCCTCCACCACCCACTGACACTCATGAATACGGGCTA +
Preference number: 6 (lower is better)
Translates to: LPPSRHLCVTAGHPG*EHPPPPTDTHEYGL
Trigger: TAGCCCGTATTCATGAGTGTCAGTGGGTGGTGGAGGATGCTCCAAACCCGGATGTCCTGCTGTCACACAAAGATGACGTGAAGGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp TGTTGCCACAGGATTCACCACGGGGTCATCCACTCTTaGAATAATCACCTGCTCAGTCCCATCTGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: CCHRIHHGVIHS*NNHLLSPIWGW
Trigger: CCACCCCCAGATGGGACTGAGCAGGTGATTATTTCAAGAGTGGATGACCCCGTGGTGAATCCTGTGGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CAA 72 bp TCACGTCATCTTTGTGTGACAGCAGGACATCCGGGTTaGGAGCATCCTCCACCACCCACTGACACTCATGAA +
Preference number: 6 (lower is better)
Translates to: SRHLCVTAGHPG*EHPPPPTDTHE
Trigger: TTCATGAGTGTCAGTGGGTGGTGGAGGATGCTCCAAACCCGGATGTCCTGCTGTCACACAAAGATGACGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp GCTTCTCTTCCTCTGACTCCTGGAATACTTCGTTACTaGGGGTCTCACTACCCAGAACTCCTGGCAGAATGG +
Preference number: 6 (lower is better)
Translates to: ASLPLTPGILRY*GSHYPELLAEW
Trigger: CCATTCTGCCAGGAGTTCTGGGTAGTGAGACCCTCAGTAACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp AGAAAGACTTCAGCCAAATTGTCCCTTTCACTCCTCTaGGGGCAGCTCTGGGAAACTCTCCTGACCACCTTC +
Preference number: 6 (lower is better)
Translates to: RKTSAKLSLSLL*GQLWETLLTTF
Trigger: GAAGGTGGTCAGGAGAGTTTCCCAGAGCTGCCCTCAGAGGAGTGAAAGGGACAATTTGGCTGAAGTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS GCA 72 bp CTTTCTCCTTTGGCCAACGAGCTAGGGACCTCAGGCTaGTTCTCTTCCTCTGACTCCTGGAATACTTCGTTA +
Preference number: 6 (lower is better)
Translates to: LSPLANELGTSG*FSSSDSWNTSL
Trigger: TAACGAAGTATTCCAGGAGTCAGAGGAAGAGAAGCAGCCTGAGGTCCCTAGCTCGTTGGCCAAAGGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CCA 72 bp ATTCGTATCTTCTTCCATCACTGGAGCAGAGTCCACTaGTACTTCCACGGACGCTGTCAGCAACTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: IRIFFHHWSRVH*YFHGRCQQLSE
Trigger: CTCAGAAAGTTGCTGACAGCGTCCGTGGAAGTACCAGTGGACTCTGCTCCAGTGATGGAAGAAGATACGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp TCACCAGGTTACTCAGGATCTGGATTTCATCCCCAGTaGTCATTTCCCAGGAACCATAGTGACCCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: SPGYSGSGFHPQ*SFPRNHSDPSP
Trigger: AGGAGAAGGGTCACTATGGTTCCTGGGAAATGATCACTGGGGATGAAATCCAGATCCTGAGTAACCTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000461167.1
CDS CAA 90 bp TGCCTGTCAGACAACAGATTATATTCATCTTCTGAGGTTAACACCTaGCCACCGGCTGGAAGAATTCGACATTTAGGAGCAGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: CLSDNRLYSSSEVNT*PPAGRIRHLGAAPL
Trigger: GAGAGGAGCTGCTCCTAAATGTCGAATTCTTCCAGCCGGTGGCAAGGTGTTAACCTCAGAAGATGAATATAATCTGTTGTCTGACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS TCA 72 bp CTCCTTGGAGATGTGGGGAAAGCAACTGCTCAAAAGTaGACACTGCATTCTCCATTAGCTCCTGCATGTAGT +
Preference number: 6 (lower is better)
Translates to: LLGDVGKATAQK*TLHSPLAPACS
Trigger: ACTACATGCAGGAGCTAATGGAGAATGCAGTGTTCACTTTTGAGCAGTTGCTTTCCCCACATCTCCAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS TCA 72 bp CAAATGAAGAGAAGTCTCAGTTCCTTTCTTAGCTGGTaGTTGCATGAGCCATGCCCTGATCTCCCACCAGAA +
Preference number: 6 (lower is better)
Translates to: QMKRSLSSFLSW*LHEPCPDLPPE
Trigger: TTCTGGTGGGAGATCAGGGCATGGCTCATGCAATCACCAGCTAAGAAAGGAACTGAGACTTCTCTTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461167.1
CDS GCA 72 bp AATCTCTTTGCTGTTCTACTTCAGTGCGCACGTGATTaGAGAAAGCCACAGAGTACTGACGACTGTAGTAGG +
Preference number: 6 (lower is better)
Translates to: NLFAVLLQCARD*RKPQSTDDCSR
Trigger: CCTACTACAGTCGTCAGTACTCTGTGGCTTTCTGCAATCACGTGCGCACTGAAGTAGAACAGCAAAGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CAA 90 bp CATCTGCTTCATGTAATCTTAATAGAGGCTCTTTTGTTCCAGCTTTaGTCTACCCCGTCACTTAAAGTGTCCCGTGTCACACAACGGGAC +
Preference number: 6 (lower is better)
Translates to: HLLHVILIEALLFQL*STPSLKVSRVTQRD
Trigger: GTCCCGTTGTGTGACACGGGACACTTTAAGTGACGGGGTAGACAAAAGCTGGAACAAAAGAGCCTCTATTAAGATTACATGAAGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461167.1
ENST00000487074.5
CDS GCA 72 bp ACTGTGACGTTAAATCTCTTTGCTGTTCTACTTCAGTaGGCACGTGATTGCAGAAAGCCACAGAGTACTGAC +
Preference number: 6 (lower is better)
Translates to: TVTLNLFAVLLQ*ARDCRKPQSTD
Trigger: GTCAGTACTCTGTGGCTTTCTGCAATCACGTGCGCACTGAAGTAGAACAGCAAAGAGATTTAACGTCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CCA 72 bp TTTAGCTGGACACTGTCTTTGGTGGTCTGGAAGTTCTaGCTGACTTCATTCACCTCTTTCTCAAAGAGTACA +
Preference number: 6 (lower is better)
Translates to: FSWTLSLVVWKF*LTSFTSFSKST
Trigger: TGTACTCTTTGAGAAAGAGGTGAATGAAGTCAGCCAGAACTTCCAGACCACCAAAGACAGTGTCCAGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367511.4
ENST00000487074.5
CDS CAA 72 bp GACAACAGATTATATTCATCTTCTGAGGTTAACACCTaGCCACCGGCTGGAAGAATTCGACATTTAGGAGCA +
Preference number: 6 (lower is better)
Translates to: DNRLYSSSEVNT*PPAGRIRHLGA
Trigger: TGCTCCTAAATGTCGAATTCTTCCAGCCGGTGGCAAGGTGTTAACCTCAGAAGATGAATATAATCTGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367511.4
CDS CAA 72 bp CATGTAATCTTAATAGAGGCTCTTTTGTTCCAGCTTTaGTCTACCCCGTCACTTAAAGTGTCCCGTGTCACA +
Preference number: 6 (lower is better)
Translates to: HVILIEALLFQL*STPSLKVSRVT
Trigger: TGTGACACGGGACACTTTAAGTGACGGGGTAGACAAAAGCTGGAACAAAAGAGCCTCTATTAAGATTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461167.1
ENST00000487074.5
CDS CAA 72 bp TGTCATCTGCTTCATGTAATCTTAATAGAGGCTCTTTaGTTCCAGCTTTTGTCTACCCCGTCACTTAAAGTG +
Preference number: 6 (lower is better)
Translates to: CHLLHVILIEAL*FQLLSTPSLKV
Trigger: CACTTTAAGTGACGGGGTAGACAAAAGCTGGAACAAAAGAGCCTCTATTAAGATTACATGAAGCAGATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461167.1
ENST00000487074.5
CDS TCA 72 bp TTTCAACGTGAATCATATTGGTATGATCTGCAAAGATaGACTGCTCGTATTTCTGAAGCTCTGGTTTGCATG +
Preference number: 6 (lower is better)
Translates to: FQRESYWYDLQR*TARISEALVCM
Trigger: CATGCAAACCAGAGCTTCAGAAATACGAGCAGTTCATCTTTGCAGATCATACCAATATGATTCACGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367511.4
ENST00000417056.5
ENST00000487074.5
CDS TCA 72 bp TGCTTAAAAGATGAAACCAGCCTCCTTCCAAATAAATaGCATCTGGTCAGCTCTTCAAGGATGAACATTTTA +
Preference number: 6 (lower is better)
Translates to: CLKDETSLLPNK*HLVSSSRMNIL
Trigger: TAAAATGTTCATCCTTGAAGAGCTGACCAGATGTCATTTATTTGGAAGGAGGCTGGTTTCATCTTTTAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417056.5
CDS TCA 72 bp TTCCAAATAAATGACATCTGGTCAGCTCTTCAAGGATaGACATTTTATTGGAATATAGGCACCTTTCAGAGT +
Preference number: 6 (lower is better)
Translates to: FQINDIWSALQG*TFYWNIGTFQS
Trigger: ACTCTGAAAGGTGCCTATATTCCAATAAAATGTTCATCCTTGAAGAGCTGACCAGATGTCATTTATTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417056.5