RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NHSL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135540

Ensembl transcript IDs: ENST00000342260.9, ENST00000343505.9, ENST00000426841.6, ENST00000427025.6, ENST00000468095.2, ENST00000479393.2, ENST00000491526.6, ENST00000533765.1, ENST00000534376.1

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTACCCACACTTCTAAAAATCAGGCTACAATTGTGTGTATGTGGCTaGACAGCAGCAGGCACCAGGTTACAGCATTGCCACTTCTACGTT +
Preference number: 1 (lower is better)
Translates to: LPTLLKIRLQLCVCG*TAAGTRLQHCHFYV
Trigger: AACGTAGAAGTGGCAATGCTGTAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTTTAGAAGTGTGGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR CCA 90 bp AAAATTACCCACACTTCTAAAAATCAGGCTACAATTGTGTGTATGTaGCTGCACAGCAGCAGGCACCAGGTTACAGCATTGCCACTTCTA +
Preference number: 1 (lower is better)
Translates to: KITHTSKNQATIVCM*LHSSRHQVTALPLL
Trigger: TAGAAGTGGCAATGCTGTAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTTTAGAAGTGTGGGTAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR TCA 90 bp TCTCCTTTCTTACAAAACTCGCTGATTTCTATAAACGTAATTCTCTaGAAGCAATTACCGCCTAGACCAGAGGACTCCGTTACTCTACCA +
Preference number: 1 (lower is better)
Translates to: SPFLQNSLISINVIL*KQLPPRPEDSVTLP
Trigger: TGGTAGAGTAACGGAGTCCTCTGGTCTAGGCGGTAATTGCTTTCAGAGAATTACGTTTATAGAAATCAGCGAGTTTTGTAAGAAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR GCA 90 bp TGCATATATCTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTaGCTCTTTCTTGAAGTAACATCTTCTCCTTTCTTACAAAACTCG +
Preference number: 1 (lower is better)
Translates to: CIYLCVLCIKNQQLY*LFLEVTSSPFLQNS
Trigger: CGAGTTTTGTAAGAAAGGAGAAGATGTTACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAGATATATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR GCA 90 bp TCATATTCAAAAGCCAATGCCACTTTTCTAAAGAAACGATCTTTGTaGCAAATTAGTAGACAATTGCTCCAAATCTCTGGTCTTGACTTC +
Preference number: 1 (lower is better)
Translates to: SYSKANATFLKKRSL*QISRQLLQISGLDF
Trigger: GAAGTCAAGACCAGAGATTTGGAGCAATTGTCTACTAATTTGGCACAAAGATCGTTTCTTTAGAAAAGTGGCATTGGCTTTTGAATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
3UTR-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAGTGGGCTCCCCGGGTaGGCCAGGGAAGGGCGCCTA +
Preference number: 2 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSGLPG*AREGRL
Trigger: TAGGCGCCCTTCCCTGGCTCACCCGGGGAGCCCACT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGTGGGCTCCCCGGGTaGGCCAGGGAAGGGCGCCTA +
Preference number: 2 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSGLPG*AREGRL
Trigger: TAGGCGCCCTTCCCTGGCTCACCCGGGGAGCCCACT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCGTTCACTCACACTaGAGGGCTGGCAACCCCGGG +
Preference number: 2 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTVHSH*RAGNPG
Trigger: CCCGGGGTTGCCAGCCCTGCAGTGTGAGTGAACGGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAGCACAGAAGCAGAGTaGGCTCCCCGGGTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSTEAE*APRVSQ
Trigger: CTGGCTCACCCGGGGAGCCCACTCTGCTTCTGTGCT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCAGGCTTCCTAGAGTaGTGCATTGCTCGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLAGFLE*CIARLP
Trigger: GGGGAGACGAGCAATGCAGCACTCTAGGAAGCCTGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAACCGTTCACTCACACTaGAGGGCTGGCAACCCCGGG +
Preference number: 2 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVTVHSH*RAGNPG
Trigger: CCCGGGGTTGCCAGCCCTGCAGTGTGAGTGAACGGT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACAATTGTGTGTATGTaGCTGCACAGCAGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTIVCM*LHSSRH
Trigger: GTGCCTGCTGCTGTGCAGCCACATACACACAATTGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCAGCAGCACACGTGTaGATATATCTGTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSAAHV*IYLCVL
Trigger: CAGAACACACAGATATATGCACACGTGTGCTGCTGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCAGGCTTCCTAGAGTaGTGCATTGCTCGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVAGFLE*CIARLP
Trigger: GGGGAGACGAGCAATGCAGCACTCTAGGAAGCCTGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAGGGCAAGTGCCAGGTaGGTCCTAAATAACCGTTCA +
Preference number: 2 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVRASAR*VLNNRS
Trigger: TGAACGGTTATTTAGGACTCACCTGGCACTTGCCCT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAACCAGCAACTCTACTaGCTCTTTCTTGAAGTAACA +
Preference number: 2 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHNQQLY*LFLEVT
Trigger: TGTTACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTATCTGTGTGTTCTGTaGATTAAGAACCAGCAACTC +
Preference number: 2 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHYLCVL*IKNQQL
Trigger: GAGTTGCTGGTTCTTAATGCACAGAACACACAGATA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR CAA 90 bp CTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCAGTaGTCAATGACCTCAGCTGCTACTCAAGGAGGAAATTCATTAAAA +
Preference number: 2 (lower is better)
Translates to: LSNPSPLSMSTPSLQ*SMTSAATQGGNSLK
Trigger: TTTTAATGAATTTCCTCCTTGAGTAGCAGCTGAGGTCATTGACAACTGAAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATATCTGTGTGTTCTGTaGATTAAGAACCAGCAACTC +
Preference number: 2 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLYLCVL*IKNQQL
Trigger: GAGTTGCTGGTTCTTAATGCACAGAACACACAGATA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGGGCAAGTGCCAGGTaGGTCCTAAATAACCGTTCA +
Preference number: 2 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHRASAR*VLNNRS
Trigger: TGAACGGTTATTTAGGACTCACCTGGCACTTGCCCT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR CAA 90 bp GCCACTTTTCTAAAGAAACGATCTTTGTGCCAAATTAGTAGACAATaGCTCCAAATCTCTGGTCTTGACTTCCGGTTGTGTGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ATFLKKRSLCQISRQ*LQISGLDFRLCEEQ
Trigger: CTGCTCTTCACACAACCGGAAGTCAAGACCAGAGATTTGGAGCAATTGTCTACTAATTTGGCACAAAGATCGTTTCTTTAGAAAAGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
3UTR-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCACTTCAGTTGTCAATaGCCTCAGCTGCTACTCAAG +
Preference number: 2 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHHFSCQ*PQLLLK
Trigger: CTTGAGTAGCAGCTGAGGTCATTGACAACTGAAGTG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATATAAACGTAATTCTCTaGAAGCAATTACCGCCTAGA +
Preference number: 2 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHINVIL*KQLPPR
Trigger: TCTAGGCGGTAATTGCTTTCAGAGAATTACGTTTAT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR TCA 72 bp GGGCCCACAGCACAGAAGCAGAGTGGGCTCCCCGGGTaGGCCAGGGAAGGGCGCCTAGCAGGCTTCCTAGAG +
Preference number: 3 (lower is better)
Translates to: GPTAQKQSGLPG*AREGRLAGFLE
Trigger: CTCTAGGAAGCCTGCTAGGCGCCCTTCCCTGGCTCACCCGGGGAGCCCACTCTGCTTCTGTGCTGTGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR TCA 72 bp TTCTACTTGTTCTTAAGCCACAGGGCAAGTGCCAGGTaGGTCCTAAATAACCGTTCACTCACACTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: FYLFLSHRASAR*VLNNRSLTLQG
Trigger: GCCCTGCAGTGTGAGTGAACGGTTATTTAGGACTCACCTGGCACTTGCCCTGTGGCTTAAGAACAAGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCACCAGGTTACAGCATaGCCACTTCTACGTTTGTCA +
Preference number: 3 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHHQVTA*PLLRLS
Trigger: TGACAAACGTAGAAGTGGCAATGCTGTAACCTGGTG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR GCA 72 bp CTTCTAAAAATCAGGCTACAATTGTGTGTATGTGGCTaGACAGCAGCAGGCACCAGGTTACAGCATTGCCAC +
Preference number: 3 (lower is better)
Translates to: LLKIRLQLCVCG*TAAGTRLQHCH
Trigger: GTGGCAATGCTGTAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTTTAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGTTTAAGCTTCTACTaGTTCTTAAGCCACAGGGCA +
Preference number: 3 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSLSFY*FLSHRA
Trigger: TGCCCTGTGGCTTAAGAACAAGTAGAAGCTTAAACT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAAAATCAGGCTACAATaGTGTGTATGTGGCTGCACA +
Preference number: 3 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLKIRLQ*CVCGCT
Trigger: TGTGCAGCCACATACACACAATTGTAGCCTGATTTT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATACACCATCACTTCAGTaGTCAATGACCTCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHTPSLQ*SMTSAA
Trigger: AGCAGCTGAGGTCATTGACAACTGAAGTGATGGTGT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGTTTAAGCTTCTACTaGTTCTTAAGCCACAGGGCA +
Preference number: 3 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSLSFY*FLSHRA
Trigger: TGCCCTGTGGCTTAAGAACAAGTAGAAGCTTAAACT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR TCA 72 bp TTACAAAACTCGCTGATTTCTATAAACGTAATTCTCTaGAAGCAATTACCGCCTAGACCAGAGGACTCCGTT +
Preference number: 3 (lower is better)
Translates to: LQNSLISINVIL*KQLPPRPEDSV
Trigger: AACGGAGTCCTCTGGTCTAGGCGGTAATTGCTTTCAGAGAATTACGTTTATAGAAATCAGCGAGTTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGCTGGGCCGAGCCTCTaGCTCCCCAGCGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHAGPSL*LPSAWS
Trigger: GCTCCAAGCGCTGGGGAGGCAGAGGCTCGGCCCAGC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCCCAGGGCTCCGAGCTaGTGTGCCCTCCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLPRAPS*CALRPL
Trigger: CAGGGGGCGGAGGGCACAGCAGCTCGGAGCCCTGGG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTGGAGAGGCCAGGCTTaGGGCAGCGCCGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHWRGQA*GSAGGC
Trigger: ACACCCACCGGCGCTGCCCCAAGCCTGGCCTCTCCA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGGAGTCCCTGGTTTCTaGGCGCTGCCCAGCAGACCG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHGVPGF*ALPSRP
Trigger: CGGTCTGCTGGGCAGCGCTCAGAAACCAGGGACTCC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCACCCCACTGCTGGTTaGACAGCCCCCTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHHPTAG*TAPCRV
Trigger: AACCCGGCAGGGGGCTGTTCAACCAGCAGTGGGGTG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCCAGGGTGCGTGGCATaGGAGCCAGCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHPGCVA*EPAWAA
Trigger: TGCAGCCCAAGCTGGCTCTCATGCCACGCACCCTGG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCTGGGAGGGCGAGCTaGCACTCTTGCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSGRAS*HSCLGG
Trigger: GCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGAGCCCCGCGGGCTATaGTGTCCACAGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLEPRGL*CPQAPR
Trigger: CCGTGGAGCCTGTGGACAGCATAGCCCGCGGGGCTC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGGCCCGTTCCCAGTaGGCACCCCACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLARSQ*APHCWL
Trigger: CAACCAGCAGTGGGGTGCCCACTGGGAACGGGCCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGCCATTCATGTCTCCTaGAGGGCCGAGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHAIHVS*RAEGTQ
Trigger: CTGGGTGCCCTCGGCCCTGCAGGAGACATGAATGGC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACCCAGGGCTCCGAGCTaGTGTGCCCTCCGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVPRAPS*CALRPL
Trigger: CAGGGGGCGGAGGGCACAGCAGCTCGGAGCCCTGGG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGCTTGTGTCACTCTaGGATGGCGTGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLLVSL*DGVAPH
Trigger: GTGCGGGGCCACGCCATCGCAGAGTGACACAAGCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGAGCCCCGCGGGCTATaGTGTCCACAGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLEPRGL*CPQAPR
Trigger: CCGTGGAGCCTGTGGACAGCATAGCCCGCGGGGCTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATGGGCACCCCACTGCTaGTTGAACAGCCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLWAPHC*LNSPLP
Trigger: CGGCAGGGGGCTGTTCAACCAGCAGTGGGGTGCCCA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGGGAGCAGAAAGGAATaGGAGCTTCTGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHGSRKE*ELLAAE
Trigger: CTCCGCCGCCAGAAGCTCTCATTCCTTTCTGCTCCC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAGTGGGCTCCCCGGGTaGGCCAGGGAAGGGCGCCTA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSGLPG*AREGRL
Trigger: TAGGCGCCCTTCCCTGGCTCACCCGGGGAGCCCACT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACCTGGGAGGCTCAGCTaGAGCGAGTGCTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLPGRLS*SECWSV
Trigger: CACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCTGGGAGGGCGAGCTaGCACTCTTGCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSGRAS*HSCLGG
Trigger: GCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACAGTGGGCACCCCACTaGTGGTTGAACAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLQWAPH*WLNSPL
Trigger: CAGGGGGCTGTTCAACCAGCAGTGGGGTGCCCACTG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAACCGTTCACTCACACTaGAGGGCTGGCAACCCCGGG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLTVHSH*RAGNPG
Trigger: CCCGGGGTTGCCAGCCCTGCAGTGTGAGTGAACGGT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGAGAAGTGGCCCATCTaGGCAGCAATGCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHEKWPI*AAMPCP
Trigger: GGGGCAAGGCATTGCTGCCCAGATGGGCCACTTCTC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGGCTCCTCCTGCTTaGGGGCTGGTGAGACATCAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLAPPA*GLVRHQ
Trigger: CTGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACGACCCCACTTGCTTTaGAGAGGCCAGGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLRPHLL*RGQAWG
Trigger: GCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGCACAGAAGCAGAGTaGGCTCCCCGGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSTEAE*APRVSQ
Trigger: CTGGCTCACCCGGGGAGCCCACTCTGCTTCTGTGCT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATGGCTTCCTGCTGGGTaGAGAGTCTGGGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLWLPAG*RVWEWG
Trigger: ACCCCACTCCCAGACTCTTCACCCAGCAGGAAGCCA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGCTTGGGGGCTGGTaGGACATCAGGCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLLGGW*DIRLNH
Trigger: ATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGCTGCTCCGTCCTGTTaGGATAGGCAGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLAAPSC*DRQLSP
Trigger: TGGGGAGAGCTGCCTATCTCAACAGGACGGAGCAGC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGCGGGCGCTGGTGTCTaGACGACTGCCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLAGAGV*TTALFQ
Trigger: CTGAAAAAGGGCAGTCGTTCAGACACCAGCGCCCGC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCTTGGGGAGCAGCTTaGCGGGCTCTCGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVAWGAA*RALGGI
Trigger: GATGCCCCCGAGAGCCCGTCAAGCTGCTCCCCAAGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACTTCTCCCTCCGAGATaGCGGTCATGGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLLPPR*RSWGCS
Trigger: AGAGCAGCCCCATGACCGTCATCTCGGAGGGAGAAG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGCTTGGCTTGGCGGTaGAGGTCCTCAACACAGGGG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSLAWR*RSSTQG
Trigger: CCCCTGTGTTGAGGACCTGCACCGCCAAGCCAAGCT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCTTCTTGGGAATCCTaGGGAGGGAGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSSWES*GGSLSG
Trigger: CCCGGACAGACTCCCTCCGCAGGATTCCCAAGAAGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCTCTTCCAAGTCACTaGAGGGGCTCTGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLALPSH*RGSGRA
Trigger: CGCCCTCCCAGAGCCCCTGCAGTGACTTGGAAGAGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCTGCTTGTGTCACTCTaGGATGGCGTGGCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLLVSL*DGVAPH
Trigger: GTGCGGGGCCACGCCATCGCAGAGTGACACAAGCAG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAAGAATGGGGCTCAGTaGAGGGCGGGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHKNGAQ*RAGRRK
Trigger: CTTTCTCCTCCCCGCCCTGCACTGAGCCCCATTCTT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTTGAGCATCTCTGCTaGAGACATGCGGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLEHLC*RHAGAG
Trigger: ACCAGCGCCCGCATGTCTGCAGCAGAGATGCTCAAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAAGGCGGCGTTCGGCTaGGGCCGTACCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHKAAFG*GRTWGR
Trigger: CCGGCCCCAGGTACGGCCGCAGCCGAACGCCGCCTT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGGATCCGGTTCCGCATaGTGTACCTGCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLGSGSA*CTCCWR
Trigger: CCGCCAGCAGCAGGTACAGCATGCGGAACCGGATCC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTACCGTTCACTCACACTaGAGGGCTGGCAACCCCGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLTVHSH*RAGNPG
Trigger: CCCGGGGTTGCCAGCCCTGCAGTGTGAGTGAACGGT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCCACATCTTGGGGGTaGGCTGGGAAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSTSWG*AGKARL
Trigger: CAACCTGGCCTTCCCAGCCCACCCCCAAGATGTGGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAGACATTGGGGGTGGTaGCGGAAGTCATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHRHWGW*RKSCCC
Trigger: GCAGCAGCATGACTTCCGCCACCACCCCCAATGTCT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTTGGACATGGCGGACTaGCCCGTTCCCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLDMAD*PVPSGH
Trigger: GTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGGTACCTTGGGCTTaGGCTTCCCCTTCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLVPWA*ASPSRL
Trigger: CAAACGGGAAGGGGAAGCCCAAGCCCAAGGTACCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATGCCTCCCCAGCGCTTaGAGCTCCAGGGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVCLPSA*SSRAAA
Trigger: AGCCGCAGCCCTGGAGCTCCAAGCGCTGGGGAGGCA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTCCCGTCGTGGGGCTaGGCACAGCTCGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLPSWG*AQLGGL
Trigger: AAGCCCTCCGAGCTGTGCCCAGCCCCACGACGGGAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAGGTGCCAGGGTGCGTaGCATGAGAGCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRCQGA*HESQLG
Trigger: CCCAAGCTGGCTCTCATGCCACGCACCCTGGCACCT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTATGAACCGGCTGCGTTaGTCTCCGGCACCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLMNRLR*SPAPQL
Trigger: CAGCTGGGGTGCCGGAGACCAACGCAGCCGGTTCAT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTTGGGGCAGCGCCGGTaGGTGTCACGGGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLGQRR*VSRAGR
Trigger: CCTCCCCGCCCGTGACACCCACCGGCGCTGCCCCAA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCGACCCCACTTGCTTTaGAGAGGCCAGGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRPHLL*RGQAWG
Trigger: GCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGGAGTCCCTGGTTTCTaGGCGCTGCCCAGCAGACCG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVGVPGF*ALPSRP
Trigger: CGGTCTGCTGGGCAGCGCTCAGAAACCAGGGACTCC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTTCACATCCTCCGTCTaGCAGCTGGAGTCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHFTSSV*QLESLV
Trigger: AACCAGGGACTCCAGCTGTCAGACGGAGGATGTGAA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCGCTGTCCCGCACTCTaGGCAGTGGGAATAGCGATG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRCPAL*AVGIAM
Trigger: CATCGCTATTCCCACTGCTCAGAGTGCGGGACAGCG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCGATCAGGCTCTCGTTaGGCACCTGCCCGTTGCACT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRSGSR*APARCT
Trigger: AGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGGGGTCCGTGTACTCTaGCTTGACGCTGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLGVRVL*LDAACV
Trigger: GACACAAGCAGCGTCAAGTCAGAGTACACGGACCCC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGGGAGCAGAAAGGAATaGGAGCTTCTGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLGSRKE*ELLAAE
Trigger: CTCCGCCGCCAGAAGCTCTCATTCCTTTCTGCTCCC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACATCTGGGGAAGGCTCTaGCCTCGACCTCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHIWGRL*PRPLES
Trigger: AGATTCCAGAGGTCGAGGTCAGAGCCTTCCCCAGAT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGGAACACATTCTCCTaGTGGTGCCACGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLRNTFS*WCHGAV
Trigger: CACTGCCCCGTGGCACCAGCAGGAGAATGTGTTCCT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACTGGTTTCTGAGCGCTaGCCAGCAGACCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLVSER*PADRQL
Trigger: TAGCTGTCGGTCTGCTGGGCAGCGCTCAGAAACCAG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAAGAATGGGGCTCAGTaGAGGGCGGGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLKNGAQ*RAGRRK
Trigger: CTTTCTCCTCCCCGCCCTGCACTGAGCCCCATTCTT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCTGGGCCGAGCCTCTaGCTCCCCAGCGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVAGPSL*LPSAWS
Trigger: GCTCCAAGCGCTGGGGAGGCAGAGGCTCGGCCCAGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTCTGCGGGCTCCACTaGAAAATCTTTCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLCGLH*KIFLRR
Trigger: CCTCCGCAGAAAGATTTTGCAGTGGAGCCCGCAGAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCCTCAAGAACCGAGGTaGCAGGGTGCGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLPQEPR*QGAWHE
Trigger: CTCATGCCACGCACCCTGGCACCTCGGTTCTTGAGG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCTCTGCTGCAGACATaGGGGCGCTGGTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSLLQT*GRWCLN
Trigger: GTTCAGACACCAGCGCCCGCATGTCTGCAGCAGAGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGCGCCCTTCTGTTCTTaGTTGGGGAGCAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLAPFCS*LGSSLT
Trigger: CGTCAAGCTGCTCCCCAAGCAAGAACAGAAGGGCGC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCGTGCTCACCAGACCTaGCTCACCTCAGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRAHQT*LTSAAH
Trigger: GTGTGCTGCTGAGGTGAGGCAGGTCTGGTGAGCACG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCATCCACTTCCACCTaGTGCCCACAAACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSSTST*CPQTES
Trigger: GCTCTCGGTTTGTGGGCAGCAGGTGGAAGTGGATGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAGAATGGGCTGGCGTTaGCCGCAAAGGTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRMGWR*PQRWVP
Trigger: AGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGACAGCTGGAGTCCCTaGTTTCTGAGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLDSWSP*FLSAAQ
Trigger: CTGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGAGACCGCCGAAGGCTaGCCTGGCGATCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLETAEG*PGDRNS
Trigger: AGAATTTCGATCGCCAGGCCAGCCTTCGGCGGTCTC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGAGAAGTGGCCCATCTaGGCAGCAATGCCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLEKWPI*AAMPCP
Trigger: GGGGCAAGGCATTGCTGCCCAGATGGGCCACTTCTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACTGGCTGCTCTTCTTaGGAATCCTGCGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTGCSS*ESCGGS
Trigger: ACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAGTAGACATTGGGGGTaGTGGCGGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSRHWG*WRKSCC
Trigger: GCAGCATGACTTCCGCCACCACCCCCAATGTCTACT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGAACCACCGGGCACTTaGGGCATTGTGGCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLEPPGT*GIVALD
Trigger: GTCCAGAGCCACAATGCCCCAAGTGCCCGGTGGTTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCTGGCTCCTCCTGCTTaGGGGCTGGTGAGACATCAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLAPPA*GLVRHQ
Trigger: CTGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACGCACTGTTCTCGGCTaGCTCCTCCTGCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVRTVLG*LLLLGG
Trigger: GCCCCCAAGCAGGAGGAGCCAGCCGAGAACAGTGCG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGGCGGGGAGGGAGAATaGTTTCGGGAGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLGGEGE*FREWSS
Trigger: TGATGACCACTCCCGAAACCATTCTCCCTCCCCGCC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCAAGCCTTCGTTCTTaGCCCACTCCTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSSLRS*PTPPAP
Trigger: GGGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGGTTCACCAGGGGAATaGGGGTCTAAGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHGSPGE*GSKSCE
Trigger: TTCACAGGACTTAGACCCTCATTCCCCTGGTGAACC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGTGCCCTCCGCCCCCTaGATAACTAGATTCACTCTT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHVPSAP*ITRFTL
Trigger: AAGAGTGAATCTAGTTATTCAGGGGGCGGAGGGCAC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTGGCAAGGACACAGGTaGATCTGGAAGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHWQGHR*IWKNGA
Trigger: AGCCCCATTCTTCCAGATTCACCTGTGTCCTTGCCA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATGCCGCCTCAGCGCCTaGGTTCTTTCTCACGGGCCT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVCRLSA*VLSHGP
Trigger: AGGCCCGTGAGAAAGAACTCAGGCGCTGAGGCGGCA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTGCCATGGTCACCCTaGCTCGAGCTCTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLPWSP*LELLAG
Trigger: GCCTGCCAAGAGCTCGAGTCAGGGTGACCATGGCAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCTTGGGGAGCAGCTTaGCGGGCTCTCGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVAWGAA*RALGGI
Trigger: GATGCCCCCGAGAGCCCGTCAAGCTGCTCCCCAAGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCGAGCTGCCACTCTTaGCTGGGAGGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVASCHS*LGGSAA
Trigger: TGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACAGTGGGCACCCCACTaGTGGTTGAACAGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVQWAPH*WLNSPL
Trigger: CAGGGGGCTGTTCAACCAGCAGTGGGGTGCCCACTG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGCACCATCTGCAATaGTTCCGTGGTTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLHHLQ*FRGYQG
Trigger: CCCCTGATAACCACGGAAGCATTGCAGATGGTGCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACACGCTCAGCCGCACTaGCATGGTCACCCTGACTCG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVHAQPH*HGHPDS
Trigger: CGAGTCAGGGTGACCATGGCAGTGCGGCTGAGCGTG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATCGGCTGGCTCCTCCTaGTTGGGGGCTGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSAGSS*LGAGET
Trigger: TGTCTCACCAGCCCCCAAGCAGGAGGAGCCAGCCGA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCGCCCTTCTGTTCTTaGTTGGGGAGCAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLAPFCS*LGSSLT
Trigger: CGTCAAGCTGCTCCCCAAGCAAGAACAGAAGGGCGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACGTTGGCCGCAAAGGTaGGTCCCTGAGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLRWPQR*VPESST
Trigger: AGTACTACTCTCAGGGACCCACCTTTGCGGCCAACG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAGCCCAGTAGGCAGGTaGCAAGCTTCGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSPVGR*QASSFC
Trigger: GCAGAAGGACGAAGCTTGCCACCTGCCTACTGGGCT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGAAAGAATGGTGGCATaGCCCTCATTCCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHERMVA*PSFQWR
Trigger: TCGCCACTGGAATGAGGGCCATGCCACCATTCTTTC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACACTCTGCGATGGCGTaGCCCCGCACAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVHSAMA*PRTGSR
Trigger: TCTACTCCCTGTGCGGGGCCACGCCATCGCAGAGTG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATTGGACATGGCGGACTaGCCCGTTCCCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLDMAD*PVPSGH
Trigger: GTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCTCTGGACCCTTCTTaGACATGGCGGACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVALDPS*TWRTGP
Trigger: CGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGTGAATCTGGAAGAATaGGGCTCAGTGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLVNLEE*GSVQGG
Trigger: CCCGCCCTGCACTGAGCCCCATTCTTCCAGATTCAC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACCTGACTCGAGCTCTTaGCAGGCGTCGGAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVPDSSS*QASEAS
Trigger: GCTCGCTTCCGACGCCTGCCAAGAGCTCGAGTCAGG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTGCCTCCCCAGCGCTTaGAGCTCCAGGGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHCLPSA*SSRAAA
Trigger: AGCCGCAGCCCTGGAGCTCCAAGCGCTGGGGAGGCA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTGGGCTTCTTGGAAATaGGGGGTGGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLWASWK*GVASCW
Trigger: CCAGCAGGAAGCCACCCCCCATTTCCAAGAAGCCCA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTCCCGTCGTGGGGCTaGGCACAGCTCGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLPSWG*AQLGGL
Trigger: AAGCCCTCCGAGCTGTGCCCAGCCCCACGACGGGAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCTCCTCTCCCGTCGTaGGGCTGGGCACAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPPLPS*GWAQLG
Trigger: TCCGAGCTGTGCCCAGCCCCACGACGGGAGAGGAGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCTCCTCTCCCGTCGTaGGGCTGGGCACAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPPLPS*GWAQLG
Trigger: TCCGAGCTGTGCCCAGCCCCACGACGGGAGAGGAGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATGGCTTCCACTCTGCTaGGAGACATGGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLWLPLC*ETWILQ
Trigger: CTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCATCAGGCTGAACCATaGGGACATTGGCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHHQAEP*GHWLPL
Trigger: GAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAATGAACCGGCTGCGTTaGTCTCCGGCACCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVMNRLR*SPAPQL
Trigger: CAGCTGGGGTGCCGGAGACCAACGCAGCCGGTTCAT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACAAAAAGGTCTTCTGTaGTCCTGGGTCGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLQKGLL*SWVDWG
Trigger: CCCCCAGTCGACCCAGGACCACAGAAGACCTTTTTG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGGAGAGGCCAGGCTTaGGGCAGCGCCGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVWRGQA*GSAGGC
Trigger: ACACCCACCGGCGCTGCCCCAAGCCTGGCCTCTCCA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGCTGTACCTGCTGCTaGCGGCAGAAGGCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVCCTCC*RQKAAF
Trigger: GAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACGATCAGGCTCTCGTTaGGCACCTGCCCGTTGCACT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVRSGSR*APARCT
Trigger: AGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACCGTGTACTCTGACTTaGCGCTGCTTGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLPCTLT*RCLCHS
Trigger: AGAGTGACACAAGCAGCGTCAAGTCAGAGTACACGG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCACCCCACTGCTGGTTaGACAGCCCCCTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVHPTAG*TAPCRV
Trigger: AACCCGGCAGGGGGCTGTTCAACCAGCAGTGGGGTG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGATCTTTGGTTTGACTaGACCACCGGGCACTTGGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLDLWFD*TTGHLG
Trigger: CCCCAAGTGCCCGGTGGTTCAGTCAAACCAAAGATC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGCCTGGTGTCTTTCATaGATTTGGGGTCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHAWCLS*IWGQEV
Trigger: CACCTCTTGACCCCAAATTCATGAAAGACACCAGGC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGGAGTTCGTTGTTCCTaGGCTGTTCGTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHGVRCS*AVRSDN
Trigger: GTTGTCTGAACGAACAGCTCAGGAACAACGAACTCC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGGCTTCCTGCTGGGTaGAGAGTCTGGGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVWLPAG*RVWEWG
Trigger: ACCCCACTCCCAGACTCTTCACCCAGCAGGAAGCCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCCAGGGTGCGTGGCATaGGAGCCAGCTTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVPGCVA*EPAWAA
Trigger: TGCAGCCCAAGCTGGCTCTCATGCCACGCACCCTGG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAGGGCAAGTGCCAGGTaGGTCCTAAATAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHRASAR*VLNNRS
Trigger: TGAACGGTTATTTAGGACTCACCTGGCACTTGCCCT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAGCTTGGCTTGGCGGTaGAGGTCCTCAACACAGGGG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSLAWR*RSSTQG
Trigger: CCCCTGTGTTGAGGACCTGCACCGCCAAGCCAAGCT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACCATCTGGGCAGCAATaGCTTGCCCCTTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVPSGQQ*LAPSVP
Trigger: GGGCACAGAAGGGGCAAGGCATTGCTGCCCAGATGG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAAGGGACTGAATGTTTaGCCTTGCTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLKGLNV*PCSRTR
Trigger: CCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTACAGAGGGACAACAGTaGGGGTTCACCAGGGGAATG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLTEGQQ*GFTRGM
Trigger: CATTCCCCTGGTGAACCCGCACTGTTGTCCCTCTGT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTCTCGTTGAGCACCTaGCCGTTGCACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLSLST*PLHWLL
Trigger: GAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACTGCAAAATCTTTCTaGGGAGGTGGTACCACCAGG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTAKSF*GGGTTR
Trigger: CCTGGTGGTACCACCTCCGCAGAAAGATTTTGCAGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTGCAGAACTCTCTTTTaGCTCCCTGCTGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHCRTLF*LPAVHR
Trigger: TCTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACCTCAAGAACCGAGGTaGCAGGGTGCGTGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVPQEPR*QGAWHE
Trigger: CTCATGCCACGCACCCTGGCACCTCGGTTCTTGAGG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGGGAGACATGGATCCTaGAGCTCCTCCCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLGRHGS*SSSLKN
Trigger: GTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACATTGGCTTCCACTCTaGTGGGAGACATGGATCCTG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLHWLPL*WETWIL
Trigger: CAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAGTTGTCACTGCTGGTaGTGCTCTTTCGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSCHCW*CSFGCF
Trigger: GAAGCATCCGAAAGAGCAGCACCAGCAGTGACAACT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCCTCTCCACGAGCCTaGTGTTTCCCTCTTAGACAA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSSPRA*CFPLRQ
Trigger: TTGTCTAAGAGGGAAACAGCAGGCTCGTGGAGAGGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCGTTGGCCGCAAAGGTaGGTCCCTGAGAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRWPQR*VPESST
Trigger: AGTACTACTCTCAGGGACCCACCTTTGCGGCCAACG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGTAATCATCACAGAATaGGCTGGCGTTGGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHVIITE*AGVGRK
Trigger: TTTGCGGCCAACGCCAGCCCATTCTGTGATGATTAC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCCTGTGAAAGAATGGTaGCATGGCCCTCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHPVKEW*HGPHSS
Trigger: ACTGGAATGAGGGCCATGCCACCATTCTTTCACAGG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTACTGGCTGCTCTTCTTaGGAATCCTGCGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLTGCSS*ESCGGS
Trigger: ACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGGGCACCCCACTGCTaGTTGAACAGCCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVWAPHC*LNSPLP
Trigger: CGGCAGGGGGCTGTTCAACCAGCAGTGGGGTGCCCA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTGGCCCGTTCCCAGTaGGCACCCCACTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLARSQ*APHCWL
Trigger: CAACCAGCAGTGGGGTGCCCACTGGGAACGGGCCAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGACCCTTCTTGGACATaGCGGACTGGCCCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVDPSWT*RTGPFP
Trigger: TGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCACTTGGGGCATTGTaGCTCTGGACCCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLALGAL*LWTLLG
Trigger: TCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGTGGGTGTATTCGACTaGCTGGAATACCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHVGVFD*LEYPLD
Trigger: ATCCAGTGGGTATTCCAGCCAGTCGAATACACCCAC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACCACCAGGAACAGTTTaGGCTTCTTGGAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLPPGTV*ASWKWG
Trigger: CCCCCATTTCCAAGAAGCCCAAACTGTTCCTGGTGG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGAACCATGGGGACATTaGCTTCCACTCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLEPWGH*LPLCWE
Trigger: CTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCGCACTGTTCTCGGCTaGCTCCTCCTGCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVRTVLG*LLLLGG
Trigger: GCCCCCAAGCAGGAGGAGCCAGCCGAGAACAGTGCG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCAAAAAGGTCTTCTGTaGTCCTGGGTCGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLQKGLL*SWVDWG
Trigger: CCCCCAGTCGACCCAGGACCACAGAAGACCTTTTTG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCTGACCTCGACCTCTaGAATCTAGGGTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSDLDL*NLGSVF
Trigger: GAACACAGACCCTAGATTCCAGAGGTCGAGGTCAGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATCAAGCCTTCGTTCTTaGCCCACTCCTCCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVSSLRS*PTPPAP
Trigger: GGGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCCCCTTCTGTGCCCTaGTTCTCCTCATGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVAPSVP*FSSWKV
Trigger: CACCTTCCATGAGGAGAATCAGGGCACAGAAGGGGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGGCGACCGGGAGACTaGGGATCACCTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVWRPGD*GSPFTA
Trigger: TGCTGTGAAAGGTGATCCTCAGTCTCCCGGTCGCCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGGTTCACCAGGGGAATaGGGGTCTAAGTCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLGSPGE*GSKSCE
Trigger: TTCACAGGACTTAGACCCTCATTCCCCTGGTGAACC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGGGTCCGTGTACTCTaGCTTGACGCTGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGVRVL*LDAACV
Trigger: GACACAAGCAGCGTCAAGTCAGAGTACACGGACCCC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGCCGCCTCAGCGCCTaGGTTCTTTCTCACGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVCRLSA*VLSHGP
Trigger: AGGCCCGTGAGAAAGAACTCAGGCGCTGAGGCGGCA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCTGCCATGGTCACCCTaGCTCGAGCTCTTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLPWSP*LELLAG
Trigger: GCCTGCCAAGAGCTCGAGTCAGGGTGACCATGGCAG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAGGAACACATTCTCCTaGTGGTGCCACGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVRNTFS*WCHGAV
Trigger: CACTGCCCCGTGGCACCAGCAGGAGAATGTGTTCCT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGGGAATACGATCCCTaGAGAATCGCTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLREYDP*RIAQHR
Trigger: TCTGTGCTGAGCGATTCTGCAGGGATCGTATTCCCT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCCATTCATGTCTCCTaGAGGGCCGAGGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVAIHVS*RAEGTQ
Trigger: CTGGGTGCCCTCGGCCCTGCAGGAGACATGAATGGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCACCTTTCACAGCATaGCTGGAGATGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSPFTA*LEMRWS
Trigger: AGACCACCTCATCTCCAGGCATGCTGTGAAAGGTGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGGTCCAAACTGCAGCTaGTCATGTTACTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLGPNCS*SCYLWE
Trigger: CTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCTGGGAGGCTCAGCTaGAGCGAGTGCTGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPGRLS*SECWSV
Trigger: CACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCGAGCTGCCACTCTTaGCTGGGAGGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVASCHS*LGGSAA
Trigger: TGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCTCTTCCAAGTCACTaGAGGGGCTCTGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVALPSH*RGSGRA
Trigger: CGCCCTCCCAGAGCCCCTGCAGTGACTTGGAAGAGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCTGCACCATCTGCAATaGTTCCGTGGTTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLHHLQ*FRGYQG
Trigger: CCCCTGATAACCACGGAAGCATTGCAGATGGTGCAG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCACGCTCAGCCGCACTaGCATGGTCACCCTGACTCG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVHAQPH*HGHPDS
Trigger: CGAGTCAGGGTGACCATGGCAGTGCGGCTGAGCGTG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCGGCTGGCTCCTCCTaGTTGGGGGCTGGTGAGACA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSAGSS*LGAGET
Trigger: TGTCTCACCAGCCCCCAAGCAGGAGGAGCCAGCCGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATGGTGTCTGAACGACTaGCCTTTTTCAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLWCLND*PFSAAE
Trigger: CTCTGCTGCTGAAAAAGGGCAGTCGTTCAGACACCA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCCGCATGCTGTACCTaGTGCTGGCGGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSACCT*CWRQKA
Trigger: CGCCTTCTGCCGCCAGCAGCAGGTACAGCATGCGGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGGATCCGGTTCCGCATaGTGTACCTGCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHGSGSA*CTCCWR
Trigger: CCGCCAGCAGCAGGTACAGCATGCGGAACCGGATCC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATCACAGAATGGGCTaGCGTTGGCCGCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVHHRMG*RWPQRW
Trigger: CCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGCAGTGGAAGCGACTTaGTCCAGTTCGTCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLAVEAT*SSSSEY
Trigger: ATACTCAGACGAACTGGACCAAGTCGCTTCCACTGC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCAGCCTGGACTGTTTaGGCTTGCTGTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSAWTV*ACCRIF
Trigger: GAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACCTCCGTCTGACAGCTaGAGTCCCTGGTTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVPPSDS*SPWFLS
Trigger: GCTCAGAAACCAGGGACTCCAGCTGTCAGACGGAGG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCTCCTCATGGAAGGTaGTACGACCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSPHGR*YDLHIL
Trigger: GAGGATGTGAAGGTCGTACCACCTTCCATGAGGAGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCACTCTGCGATGGCGTaGCCCCGCACAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHHSAMA*PRTGSR
Trigger: TCTACTCCCTGTGCGGGGCCACGCCATCGCAGAGTG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCTCTGGACCCTTCTTaGACATGGCGGACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVALDPS*TWRTGP
Trigger: CGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGGGGCATTGTGGCTCTaGACCCTTCTTGGACATGGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVGALWL*TLLGHG
Trigger: GCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTGGTACCTTGGGCTTaGGCTTCCCCTTCCCGTTTG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLVPWA*ASPSRL
Trigger: CAAACGGGAAGGGGAAGCCCAAGCCCAAGGTACCAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAAGGCACCAATCAGGTaGGGAGCAGAAAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLKAPIR*GAERNE
Trigger: CTCATTCCTTTCTGCTCCCCACCTGATTGGTGCCTT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGTGAATCTGGAAGAATaGGGCTCAGTGCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVVNLEE*GSVQGG
Trigger: CCCGCCCTGCACTGAGCCCCATTCTTCCAGATTCAC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGCAGATGGCTTTAAGTaGTACTGTGGAGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHADGFK*YCGATG
Trigger: TCCAGTTGCTCCACAGTACCACTTAAAGCCATCTGC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCTGACTCGAGCTCTTaGCAGGCGTCGGAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPDSSS*QASEAS
Trigger: GCTCGCTTCCGACGCCTGCCAAGAGCTCGAGTCAGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGGGCTTCTTGGAAATaGGGGGTGGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVWASWK*GVASCW
Trigger: CCAGCAGGAAGCCACCCCCCATTTCCAAGAAGCCCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGGTGCCAGGGTGCGTaGCATGAGAGCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHRCQGA*HESQLG
Trigger: CCCAAGCTGGCTCTCATGCCACGCACCCTGGCACCT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTCTGCTGGGAGACATaGATCCTGCAGCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLCWET*ILQLLP
Trigger: AGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTGGTCCTGGGTCGACTaGGGGTCATTACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLWSWVD*GSLPHH
Trigger: ATGATGAGGTAATGACCCCCAGTCGACCCAGGACCA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGCGGGGAGGGAGAATaGTTTCGGGAGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGGEGE*FREWSS
Trigger: TGATGACCACTCCCGAAACCATTCTCCCTCCCCGCC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCTGACCTCGACCTCTaGAATCTAGGGTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSDLDL*NLGSVF
Trigger: GAACACAGACCCTAGATTCCAGAGGTCGAGGTCAGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGCTGTACCTGCTGCTaGCGGCAGAAGGCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVCCTCC*RQKAAF
Trigger: GAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGAACCGCCACACTGTaGGGAGGGCTCTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRTATL*GGLSAL
Trigger: GAGGGCAGAGAGCCCTCCCCACAGTGTGGCGGTTCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGAACCGCCACACTGTaGGGAGGGCTCTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHRTATL*GGLSAL
Trigger: GAGGGCAGAGAGCCCTCCCCACAGTGTGGCGGTTCT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGCACAGAAGCAGAGTaGGCTCCCCGGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSTEAE*APRVSQ
Trigger: CTGGCTCACCCGGGGAGCCCACTCTGCTTCTGTGCT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAACAATTGTGTGTATGTaGCTGCACAGCAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLTIVCM*LHSSRH
Trigger: GTGCCTGCTGCTGTGCAGCCACATACACACAATTGT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATTGGTCCAGTTCGTCTaGGTATTAAGGTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLVQFV*VLRSEK
Trigger: CTTCTCCGACCTTAATACTCAGACGAACTGGACCAA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTCGGCTCAAGGGACTaGATGTTTGCCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLGSRD*MFALAP
Trigger: TGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCGCTGTCCCGCACTCTaGGCAGTGGGAATAGCGATG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHRCPAL*AVGIAM
Trigger: CATCGCTATTCCCACTGCTCAGAGTGCGGGACAGCG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGATCTTTGGTTTGACTaGACCACCGGGCACTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVDLWFD*TTGHLG
Trigger: CCCCAAGTGCCCGGTGGTTCAGTCAAACCAAAGATC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGGAGTTCGTTGTTCCTaGGCTGTTCGTTCAGACAAC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLGVRCS*AVRSDN
Trigger: GTTGTCTGAACGAACAGCTCAGGAACAACGAACTCC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGTGAGACATCAGGCTaGACCATGGGGACATTGGCT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGETSG*TMGTLA
Trigger: AGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCTGCTCCGTCCTGTTaGGATAGGCAGCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHAAPSC*DRQLSP
Trigger: TGGGGAGAGCTGCCTATCTCAACAGGACGGAGCAGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGAGTGGTCATCATCTaGATCTCTACGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGVVII*ISTAED
Trigger: GTCCTCGGCCGTAGAGATTCAGATGATGACCACTCC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCGGGCGCTGGTGTCTaGACGACTGCCCTTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHAGAGV*TTALFQ
Trigger: CTGAAAAAGGGCAGTCGTTCAGACACCAGCGCCCGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAATCTGGGGAAGGCTCTaGCCTCGACCTCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVIWGRL*PRPLES
Trigger: AGATTCCAGAGGTCGAGGTCAGAGCCTTCCCCAGAT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTTCTCCCTCCGAGATaGCGGTCATGGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLLPPR*RSWGCS
Trigger: AGAGCAGCCCCATGACCGTCATCTCGGAGGGAGAAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACACTTCAGTTGTCAATaGCCTCAGCTGCTACTCAAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLHFSCQ*PQLLLK
Trigger: CTTGAGTAGCAGCTGAGGTCATTGACAACTGAAGTG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATGGACTGTTTGGGCTTaGTGTCGCATCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLWTVWA*CRIFSS
Trigger: AGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCATCTGGGCAGCAATaGCTTGCCCCTTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPSGQQ*LAPSVP
Trigger: GGGCACAGAAGGGGCAAGGCATTGCTGCCCAGATGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCAGCACAGACATGTTaGCAGAGGAACCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSAQTC*QRNLRS
Trigger: ACTTCTCAGGTTCCTCTGGCAACATGTCTGTGCTGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAGGGAATACGATCCCTaGAGAATCGCTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLREYDP*RIAQHR
Trigger: TCTGTGCTGAGCGATTCTGCAGGGATCGTATTCCCT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACGTTTGGTCCAAACTaGAGCTGCTCATGTTACTTG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTFGPN*SCSCYL
Trigger: CAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCCCAAAGCCATCACTaGTATTGCACAGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSQSHH*YCTDSQ
Trigger: CTGGGAATCTGTGCAATAGCAGTGATGGCTTTGGGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTCTCGTTGAGCACCTaGCCGTTGCACTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLSLST*PLHWLL
Trigger: GAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACTCTGCGGGCTCCACTaGAAAATCTTTCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVLCGLH*KIFLRR
Trigger: CCTCCGCAGAAAGATTTTGCAGTGGAGCCCGCAGAG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGGGAGACATGGATCCTaGAGCTCCTCCCTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVGRHGS*SSSLKN
Trigger: GTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGTTCTTGAGCATCTCTaGTGCAGACATGCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVVLEHL*CRHAGA
Trigger: AGCGCCCGCATGTCTGCAGCAGAGATGCTCAAGAAC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCGTGCTCACCAGACCTaGCTCACCTCAGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRAHQT*LTSAAH
Trigger: GTGTGCTGCTGAGGTGAGGCAGGTCTGGTGAGCACG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGGGCAGAAAGCCAGCTaGCCTGGTGAAGTAACTCCT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVGQKAS*PGEVTP
Trigger: AGGAGTTACTTCACCAGGGCAGCTGGCTTTCTGCCC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGAATGGGCTGGCGTTaGCCGCAAAGGTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRMGWR*PQRWVP
Trigger: AGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCGCATCTTCTCTTCTaGTGTTGGCAGTGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSHLLF*CWQWKR
Trigger: TCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGACAGCTGGAGTCCCTaGTTTCTGAGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVDSWSP*FLSAAQ
Trigger: CTGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCGCCGAAGGCTGGCCTaGCGATCGAAATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRRRLA*RSKFSP
Trigger: TGGGGAGAATTTCGATCGCCAGGCCAGCCTTCGGCG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCAACTCCTGGGATTTaGGTCTCAAAAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSTPGI*VSKVFQ
Trigger: CTGGAACACTTTTGAGACCCAAATCCCAGGAGTTGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCCACATCTTGGGGGTaGGCTGGGAAGGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSTSWG*AGKARL
Trigger: CAACCTGGCCTTCCCAGCCCACCCCCAAGATGTGGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTGTTACTTGTGGGAGTaGAATAGCCAGGAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHCYLWE*NSQELL
Trigger: TAGCAACTCCTGGCTATTCCACTCCCACAAGTAACA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAACCTGCCCGTTGCACTaGCTGCTCTTCTTGGGAATC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVTCPLH*LLFLGI
Trigger: GATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGCTGCAGCGAGTGCTaGAGTGTGGCGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSCSEC*SVAIRL
Trigger: GAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGCTGCAGCGAGTGCTaGAGTGTGGCGATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSCSEC*SVAIRL
Trigger: GAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGACCCTTCTTGGACATaGCGGACTGGCCCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHDPSWT*RTGPFP
Trigger: TGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGAACCACCGGGCACTTaGGGCATTGTGGCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVEPPGT*GIVALD
Trigger: GTCCAGAGCCACAATGCCCCAAGTGCCCGGTGGTTC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGGAGAGCCCACGGCTaGATCCAGCTTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGRAHG*IQLLHS
Trigger: ACTATGAAGAAGCTGGATCCAGCCGTGGGCTCTCCC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAAGGCACCAATCAGGTaGGGAGCAGAAAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLKAPIR*GAERNE
Trigger: CTCATTCCTTTCTGCTCCCCACCTGATTGGTGCCTT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTTTGGGGTCAAGAGGTaGGGCAGGTGGGGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHFGVKR*GRWGFR
Trigger: TCGGAACCCCCACCTGCCCCACCTCTTGACCCCAAA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGTCACAGAGGCAGGCTaGCTTTCACTCTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLVTEAG*LSLSIS
Trigger: TGAAATGGAGAGTGAAAGCCAGCCTGCCTCTGTGAC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGAACCATGGGGACATTaGCTTCCACTCTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVEPWGH*LPLCWE
Trigger: CTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGGTCTTCTGTGGTCCTaGGTCGACTGGGGGTCATTA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVGLLWS*VDWGSL
Trigger: TAATGACCCCCAGTCGACCCAGGACCACAGAAGACC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTCATGGGGCTGCTCTaGATCCGGTTCCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVVMGLL*IRFRML
Trigger: CAGCATGCGGAACCGGATCCAGAGCAGCCCCATGAC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGTCATGGGGCTGCTCTaGATCCGGTTCCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVVMGLL*IRFRML
Trigger: CAGCATGCGGAACCGGATCCAGAGCAGCCCCATGAC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCCACACGGTTACTTaGGAGAAATCAAAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTHTVT*EKSKSS
Trigger: TGAGCTCTTTGATTTCTCCCAAGTAACCGTGTGGGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGGCACCCCGACTCTTTaGCGTGTCCCTAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHGTPTL*RVPSIP
Trigger: TGGGATGCTAGGGACACGCCAAAGAGTCGGGGTGCC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTGGAAACCGCTTTTCTaGGCTGGGCTCTGTATATCC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLWKPLF*AGLCIS
Trigger: GGATATACAGAGCCCAGCCCAGAAAAGCGGTTTCCA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCCCCTTCTGTGCCCTaGTTCTCCTCATGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVAPSVP*FSSWKV
Trigger: CACCTTCCATGAGGAGAATCAGGGCACAGAAGGGGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGGCGACCGGGAGACTaGGGATCACCTTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVWRPGD*GSPFTA
Trigger: TGCTGTGAAAGGTGATCCTCAGTCTCCCGGTCGCCA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGACACAGGCACAGGGGTaGGTGCTGTGGGTGTATTCG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVTQAQG*VLWVYS
Trigger: CGAATACACCCACAGCACTCACCCCTGTGCCTGTGT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATACACAGGCACAGGGGTaGGTGCTGTGGGTGTATTCG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHTQAQG*VLWVYS
Trigger: CGAATACACCCACAGCACTCACCCCTGTGCCTGTGT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTGCTTGGGGGCTGGTaGGACATCAGGCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLLGGW*DIRLNH
Trigger: ATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATCAGCAGCAGAGCTTTaGAGTTGTCACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSAAEL*SCHCWC
Trigger: GCACCAGCAGTGACAACTTCAAAGCTCTGCTGCTGA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTGGTTTCTGAGCGCTaGCCAGCAGACCGACAGCTA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLVSER*PADRQL
Trigger: TAGCTGTCGGTCTGCTGGGCAGCGCTCAGAAACCAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCTGGTAGAGGAAAGTaGCATTCATGTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSGRGK*HSCLLQ
Trigger: CTGCAGGAGACATGAATGGCACTTTCCTCTACCAGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGTCAGTGTGCACAGATaGACAGTAGCCATCGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVVSVHR*TVAIVV
Trigger: GACCACGATGGCTACTGTGCATCTGTGCACACTGAC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGTCAGTGTGCACAGATaGACAGTAGCCATCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVVSVHR*TVAIVV
Trigger: GACCACGATGGCTACTGTGCATCTGTGCACACTGAC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAACATTGATCACGCTGTaGCTGGGGTTCCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVTLITL*LGFPKP
Trigger: TGGCTTTGGGAACCCCAGGCACAGCGTGATCAATGT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCTTCTTGGGAATCCTaGGGAGGGAGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSSWES*GGSLSG
Trigger: CCCGGACAGACTCCCTCCGCAGGATTCCCAAGAAGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCCCGTTGCACTGGCTaGTCTTCTTGGGAATCCTGC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVARCTG*SSWESC
Trigger: GCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCCCGTTGCACTGGCTaGTCTTCTTGGGAATCCTGC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVARCTG*SSWESC
Trigger: GCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCTCAACTGCACCATCTaGAATGCTTCCGTGGTTATC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLNCTI*NASVVI
Trigger: GATAACCACGGAAGCATTGCAGATGGTGCAGTTGAG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATTCGCTCACGTTCTCTaGGGGCTCCACTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVFAHVL*GLHCKI
Trigger: GATTTTGCAGTGGAGCCCGCAGAGAACGTGAGCGAA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATTCGCTCACGTTCTCTaGGGGCTCCACTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVFAHVL*GLHCKI
Trigger: GATTTTGCAGTGGAGCCCGCAGAGAACGTGAGCGAA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTCTCTGCTGCAGACATaGGGGCGCTGGTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSLLQT*GRWCLN
Trigger: GTTCAGACACCAGCGCCCGCATGTCTGCAGCAGAGA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTTGAGCATCTCTGCTaGAGACATGCGGGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLEHLC*RHAGAG
Trigger: ACCAGCGCCCGCATGTCTGCAGCAGAGATGCTCAAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCAGCAGCACACGTGTaGATATATCTGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSAAHV*IYLCVL
Trigger: CAGAACACACAGATATATGCACACGTGTGCTGCTGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCAGGTTACAGCATTaGCACTTCTACGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHTRLQH*HFYVCH
Trigger: ATGACAAACGTAGAAGTGGCAATGCTGTAACCTGGT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATCAGCCTGGACTGTTTaGGCTTGCTGTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVSAWTV*ACCRIF
Trigger: GAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACCATCAGCATCATCTTaGCCAGTGCCTGATGCTAGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVPSASS*PVPDAS
Trigger: GCTAGCATCAGGCACTGGCCAAGATGATGCTGATGG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAAGTGTCTCAACTCCTaGGATTTGGGTCTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHKCLNS*DLGLKS
Trigger: ACTTTTGAGACCCAAATCCCAGGAGTTGAGACACTT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTTATACGGCATAGCTTaGGACCCATTCTCCCTATTT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLYGIA*DPFSLF
Trigger: AAATAGGGAGAATGGGTCCCAAGCTATGCCGTATAA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCTTTGTTGGACGTTTaGTCCAAACTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSLLDV*SKLQLL
Trigger: GAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACATTTATCCTGGTAATTaGACCGGTCCCCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHIYPGN*TGPLGF
Trigger: AAAACCAAGGGGACCGGTCCAATTACCAGGATAAAT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGACATTGGGGGTGGTaGCGGAAGTCATGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRHWGW*RKSCCC
Trigger: GCAGCAGCATGACTTCCGCCACCACCCCCAATGTCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGGGGCATTGTGGCTCTaGACCCTTCTTGGACATGGC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHGALWL*TLLGHG
Trigger: GCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCAGATGGCTTTAAGTaGTACTGTGGAGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLADGFK*YCGATG
Trigger: TCCAGTTGCTCCACAGTACCACTTAAAGCCATCTGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTCTGCTGGGAGACATaGATCCTGCAGCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLCWET*ILQLLP
Trigger: AGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGGTCCTGGGTCGACTaGGGGTCATTACCTCATCAT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVWSWVD*GSLPHH
Trigger: ATGATGAGGTAATGACCCCCAGTCGACCCAGGACCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCATTCCCTCAGTACTaGTTTGAGGTTGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVAFPQY*FEVELG
Trigger: GCCAAGCTCAACCTCAAATCAGTACTGAGGGAATGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGCATTCCCTCAGTACTaGTTTGAGGTTGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVAFPQY*FEVELG
Trigger: GCCAAGCTCAACCTCAAATCAGTACTGAGGGAATGC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTCGGCTCAAGGGACTaGATGTTTGCCCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLGSRD*MFALAP
Trigger: TGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGCCCTTCCATTACCTaGGGATTTGTATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVCPSIT*GFVFPG
Trigger: CCCTGGGAATACAAATCCTCAGGTAATGGAAGGGCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGGTGAGACATCAGGCTaGACCATGGGGACATTGGCT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVGETSG*TMGTLA
Trigger: AGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTTCCTTTTGGATCTGTaGATAGCTGCAAAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHFLLDL*IAAKRS
Trigger: AGACCTTTTTGCAGCTATTCACAGATCCAAAAGGAA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGGAGTGGTCATCATCTaGATCTCTACGGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVGVVII*ISTAED
Trigger: GTCCTCGGCCGTAGAGATTCAGATGATGACCACTCC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATATTCGGCTGGAGTCTaGAGGAACCTGAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVYSAGV*RNLKSL
Trigger: AAGGCTCTTCAGGTTCCTTCAGACTCCAGCCGAATA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR TCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAGTCTCATAATGATTTaGCCCATGCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSLIMI*PMQSNF
Trigger: AAAGTTGGACTGCATGGGTCAAATCATTATGAGACT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTGAATGTTTGCCCTTaGTCCAGAACGCGGAAGACT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLNVCP*SRTRKT
Trigger: AGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGCTGGTGGAGTAGGTTaGATGAGGAGAAACCACACA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVAGGVG*MRRNHT
Trigger: TGTGTGGTTTCTCCTCATGCAACCTACTCCACCAGC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCTGGTGGAGTAGGTTaGATGAGGAGAAACCACACA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVAGGVG*MRRNHT
Trigger: TGTGTGGTTTCTCCTCATGCAACCTACTCCACCAGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATCACCTTTCACAGCATaGCTGGAGATGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVSPFTA*LEMRWS
Trigger: AGACCACCTCATCTCCAGGCATGCTGTGAAAGGTGA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATACAGAGGGACAACAGTaGGGGTTCACCAGGGGAATG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHTEGQQ*GFTRGM
Trigger: CATTCCCCTGGTGAACCCGCACTGTTGTCCCTCTGT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGTCCAAACTGCAGCTaGTCATGTTACTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGPNCS*SCYLWE
Trigger: CTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTACGTTTGGTCCAAACTaGAGCTGCTCATGTTACTTG +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLTFGPN*SCSCYL
Trigger: CAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCTCACGGGCCTCAACTaGACCATCTGCAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVLTGLN*TICNAS
Trigger: GGAAGCATTGCAGATGGTGCAGTTGAGGCCCGTGAG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCTCACGGGCCTCAACTaGACCATCTGCAATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLTGLN*TICNAS
Trigger: GGAAGCATTGCAGATGGTGCAGTTGAGGCCCGTGAG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAACTGCAAAATCTTTCTaGGGAGGTGGTACCACCAGG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVTAKSF*GGGTTR
Trigger: CCTGGTGGTACCACCTCCGCAGAAAGATTTTGCAGT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCTCTTTTGCCTCCCTaGTGTGCACAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSLLPP*CAQSPP
Trigger: AGGAGGGCTCTGTGCACAGCAGGGAGGCAAAAGAGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTCTCTTTTGCCTCCCTaGTGTGCACAGAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSLLPP*CAQSPP
Trigger: AGGAGGGCTCTGTGCACAGCAGGGAGGCAAAAGAGA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGCTGCTCTTTCGGATaGTTCTCTGAATCGACCCCA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVCCSFG*FSESTP
Trigger: TGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGTTCTTGAGCATCTCTaGTGCAGACATGCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVVLEHL*CRHAGA
Trigger: AGCGCCCGCATGTCTGCAGCAGAGATGCTCAAGAAC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTCCACTTCCACCTGCTaGCCACAAACCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSTSTC*PQTESS
Trigger: AGAGCTCTCGGTTTGTGGGCAGCAGGTGGAAGTGGA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGTAATCATCACAGAATaGGCTGGCGTTGGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVVIITE*AGVGRK
Trigger: TTTGCGGCCAACGCCAGCCCATTCTGTGATGATTAC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATTCTGGTGTTGGCAGTaGAAGCGACTTGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVFWCWQ*KRLGPV
Trigger: AACTGGACCAAGTCGCTTCCACTGCCAACACCAGAA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACTTCTCTTCTGGTGTTaGCAGTGGAAGCGACTTGGT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVLLFWC*QWKRLG
Trigger: ACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATCTCCTCATGGAAGGTaGTACGACCTTCACATCCTC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSPHGR*YDLHIL
Trigger: GAGGATGTGAAGGTCGTACCACCTTCCATGAGGAGA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGAACGCGGAAGACTATaGAAGCCAGCATCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVERGRL*KPASLS
Trigger: TGACAGTGATGCTGGCTTCCATAGTCTTCCGCGTTC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGAGGCACCTCCTAAATaGCCTAAGTTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLEAPPK*PKFSSA
Trigger: AGCAGATGAAAACTTAGGCCATTTAGGAGGTGCCTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAATTTATCCTGGTAATTaGACCGGTCCCCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLIYPGN*TGPLGF
Trigger: AAAACCAAGGGGACCGGTCCAATTACCAGGATAAAT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATACCTGCCCGTTGCACTaGCTGCTCTTCTTGGGAATC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHTCPLH*LLFLGI
Trigger: GATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGTAGACATTGGGGGTaGTGGCGGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSRHWG*WRKSCC
Trigger: GCAGCATGACTTCCGCCACCACCCCCAATGTCTACT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATACAGGGAGTAGACATTaGGGGTGGTGGCGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHTGSRH*GWWRKS
Trigger: TGACTTCCGCCACCACCCCCAATGTCTACTCCCTGT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCACTTGGGGCATTGTaGCTCTGGACCCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVALGAL*LWTLLG
Trigger: TCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGTGTATTCGACTGGCTaGAATACCCACTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVVYSTG*NTHWME
Trigger: CTCCATCCAGTGGGTATTCCAGCCAGTCGAATACAC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTGGACGATGAGGAAATaGATACTGAAGATATCAGAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHWTMRK*ILKISE
Trigger: CTCTGATATCTTCAGTATCCATTTCCTCATCGTCCA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGGGAGAGCCCACGGCTaGATCCAGCTTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVGRAHG*IQLLHS
Trigger: ACTATGAAGAAGCTGGATCCAGCCGTGGGCTCTCCC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCTGCAATGCTTCCGTaGTTATCAGGGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSAMLP*LSGAWG
Trigger: CCCCCATGCCCCTGATAACCACGGAAGCATTGCAGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCTGCAATGCTTCCGTaGTTATCAGGGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSAMLP*LSGAWG
Trigger: CCCCCATGCCCCTGATAACCACGGAAGCATTGCAGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGTACTGTGGAGCAACTaGAGTTCGTTGTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVVLWSN*SSLFLS
Trigger: GCTCAGGAACAACGAACTCCAGTTGCTCCACAGTAC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTGGCTTCCACTCTGCTaGGAGACATGGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVWLPLC*ETWILQ
Trigger: CTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGGTCTTCTGTGGTCCTaGGTCGACTGGGGGTCATTA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVGLLWS*VDWGSL
Trigger: TAATGACCCCCAGTCGACCCAGGACCACAGAAGACC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATATCAGGGGTGTACACTaGGTGGCCATCAGCATCATC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHIRGVH*VAISII
Trigger: GATGATGCTGATGGCCACTCAGTGTACACCCCTGAT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTATCAGGGGTGTACACTaGGTGGCCATCAGCATCATC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVIRGVH*VAISII
Trigger: GATGATGCTGATGGCCACTCAGTGTACACCCCTGAT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTGTGGCATTTGGGATaGTGCTGGTGGAGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVWHLG*CWWSRL
Trigger: CAACCTACTCCACCAGCATCATCCCAAATGCCACAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTGCCCTCCGCCCCCTaGATAACTAGATTCACTCTT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVPSAP*ITRFTL
Trigger: AAGAGTGAATCTAGTTATTCAGGGGGCGGAGGGCAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCGTGTACTCTGACTTaGCGCTGCTTGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPCTLT*RCLCHS
Trigger: AGAGTGACACAAGCAGCGTCAAGTCAGAGTACACGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACACTGGATGGAGAAATaGCTCTGTGTGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVHWMEK*LCVTSL
Trigger: CAGAGAAGTCACACAGAGTCATTTCTCCATCCAGTG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTGGCAAGGACACAGGTaGATCTGGAAGAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHWQGHR*IWKNGA
Trigger: AGCCCCATTCTTCCAGATTCACCTGTGTCCTTGCCA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCAGCAGCAGAGCTTTaGAGTTGTCACTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSAAEL*SCHCWC
Trigger: GCACCAGCAGTGACAACTTCAAAGCTCTGCTGCTGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCTCTTAGACAACGCTaGCAGTCAGGCACCGCATTA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPLRQR*QSGTAL
Trigger: TAATGCGGTGCCTGACTGTCAGCGTTGTCTAAGAGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAAGGGACTGAATGTTTaGCCTTGCTCCAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVKGLNV*PCSRTR
Trigger: CCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATCTGGTAGAGGAAAGTaGCATTCATGTCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVSGRGK*HSCLLQ
Trigger: CTGCAGGAGACATGAATGGCACTTTCCTCTACCAGA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATCCCAAAGCCATCACTaGTATTGCACAGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSQSHH*YCTDSQ
Trigger: CTGGGAATCTGTGCAATAGCAGTGATGGCTTTGGGA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAACAGCCTCTTTGTCTaGCTGGACAAGGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVNSLFV*LDKEEK
Trigger: TTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGGGGTGTACACTGAGTaGCCATCAGCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVGVYTE*PSASSW
Trigger: CCAAGATGATGCTGATGGCCACTCAGTGTACACCCC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAAGTGTCTCAACTCCTaGGATTTGGGTCTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLKCLNS*DLGLKS
Trigger: ACTTTTGAGACCCAAATCCCAGGAGTTGAGACACTT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAAGACAGTGTGGCATTTaGGATGATGCTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVRQCGI*DDAGGV
Trigger: TACTCCACCAGCATCATCCCAAATGCCACACTGTCT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAGACAGTGTGGCATTTaGGATGATGCTGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVRQCGI*DDAGGV
Trigger: TACTCCACCAGCATCATCCCAAATGCCACACTGTCT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGAAAGAATGGTGGCATaGCCCTCATTCCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVERMVA*PSFQWR
Trigger: TCGCCACTGGAATGAGGGCCATGCCACCATTCTTTC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACAGCATCCTCTTTGTTaGACGTTTGGTCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVQHPLC*TFGPNC
Trigger: GCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCGGGAGGATTCTGGCTaGCCAGAATTTGTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHREDSG*PEFVKG
Trigger: GCCTTTCACAAATTCTGGCCAGCCAGAATCCTCCCG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCACCAGGAACAGTTTaGGCTTCTTGGAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPPGTV*ASWKWG
Trigger: CCCCCATTTCCAAGAAGCCCAAACTGTTCCTGGTGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAATCTTTCTGCGGAGGTaGTACCACCAGGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVIFLRR*YHQEQF
Trigger: AAACTGTTCCTGGTGGTACCACCTCCGCAGAAAGAT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAATCTTTCTGCGGAGGTaGTACCACCAGGAACAGTTT +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVIFLRR*YHQEQF
Trigger: AAACTGTTCCTGGTGGTACCACCTCCGCAGAAAGAT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCATCAGGCTGAACCATaGGGACATTGGCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHHQAEP*GHWLPL
Trigger: GAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAACCGCTTTTCTGGGCTaGGCTCTGTATATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVTAFLG*ALYIQF
Trigger: AAACTGGATATACAGAGCCCAGCCCAGAAAAGCGGT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR TCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTCGGAGAAGTCACTTaGGGCTGGTGTTTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVVGEVT*GWCFRS
Trigger: AGACCTAAAACACCAGCCTCAAGTGACTTCTCCGAC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTGCCCTTCCATTACCTaGGGATTTGTATTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHCPSIT*GFVFPG
Trigger: CCCTGGGAATACAAATCCTCAGGTAATGGAAGGGCA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCCTGGTGTCTTTCATaGATTTGGGGTCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHAWCLS*IWGQEV
Trigger: CACCTCTTGACCCCAAATTCATGAAAGACACCAGGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTTCCTTTTGGATCTGTaGATAGCTGCAAAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLFLLDL*IAAKRS
Trigger: AGACCTTTTTGCAGCTATTCACAGATCCAAAAGGAA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGGGCAAGTGCCAGGTaGGTCCTAAATAACCGTTCA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRASAR*VLNNRS
Trigger: TGAACGGTTATTTAGGACTCACCTGGCACTTGCCCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCAACTTACAGCACGTaGGAGAGAACCTGTATTCGG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPTYST*ERTCIR
Trigger: CCGAATACAGGTTCTCTCTCACGTGCTGTAAGTTGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGTAGTACTGAGAACTaGGGTAGCCATCATGCCGCA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSSTEN*GSHHAA
Trigger: TGCGGCATGATGGCTACCGCAGTTCTCAGTACTACT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCATCATCTTGGCCAGTaGCTGATGCTAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVHHLGQ*LMLAPS
Trigger: AGAAGGAGCTAGCATCAGGCACTGGCCAAGATGATG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCTGAATGTTTGCCCTTaGTCCAGAACGCGGAAGACT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLNVCP*SRTRKT
Trigger: AGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTGCTGCTCTTTCGGATaGTTCTCTGAATCGACCCCA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVCCSFG*FSESTP
Trigger: TGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGCA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTGTCACTGCTGGTGCTaGTCTTTCGGATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHCHCWC*SFGCFS
Trigger: AGAGAAGCATCCGAAAGAGCAGCACCAGCAGTGACA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGTCACTGCTGGTGCTaGTCTTTCGGATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVCHCWC*SFGCFS
Trigger: AGAGAAGCATCCGAAAGAGCAGCACCAGCAGTGACA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGTTGTCACTGCTGGTaGTGCTCTTTCGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSCHCW*CSFGCF
Trigger: GAAGCATCCGAAAGAGCAGCACCAGCAGTGACAACT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTGGTGTCTGAACGACTaGCCTTTTTCAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVWCLND*PFSAAE
Trigger: CTCTGCTGCTGAAAAAGGGCAGTCGTTCAGACACCA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCAGTGGAAGCGACTTaGTCCAGTTCGTCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHAVEAT*SSSSEY
Trigger: ATACTCAGACGAACTGGACCAAGTCGCTTCCACTGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTTCTGGTGTTGGCAGTaGAAGCGACTTGGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHFWCWQ*KRLGPV
Trigger: AACTGGACCAAGTCGCTTCCACTGCCAACACCAGAA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCTTCTCTTCTGGTGTTaGCAGTGGAAGCGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVLLFWC*QWKRLG
Trigger: ACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCGCATCTTCTCTTCTaGTGTTGGCAGTGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSHLLF*CWQWKR
Trigger: TCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCATCAGCATCATCTTaGCCAGTGCCTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPSASS*PVPDAV
Trigger: AACTGCATCAGGCACTGGCCAAGATGATGCTGATGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGAACGCGGAAGACTATaGAAGCCAGCATCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVERGRL*KPASLS
Trigger: TGACAGTGATGCTGGCTTCCATAGTCTTCCGCGTTC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGAGGCACCTCCTAAATaGCCTAAGTTTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVEAPPK*PKFSSA
Trigger: AGCAGATGAAAACTTAGGCCATTTAGGAGGTGCCTC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCTGTGAAAGAATGGTaGCATGGCCCTCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPVKEW*HGPHSS
Trigger: ACTGGAATGAGGGCCATGCCACCATTCTTTCACAGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGTCCTGTGAAAGAATaGTGGCATGGCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSPVKE*WHGPHS
Trigger: GGAATGAGGGCCATGCCACCATTCTTTCACAGGACT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTAGTCCTGTGAAAGAATaGTGGCATGGCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSPVKE*WHGPHS
Trigger: GGAATGAGGGCCATGCCACCATTCTTTCACAGGACT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTGTATTCGACTGGCTaGAATACCCACTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVVYSTG*NTHWME
Trigger: CTCCATCCAGTGGGTATTCCAGCCAGTCGAATACAC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTGGGTGTATTCGACTaGCTGGAATACCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVGVFD*LEYPLD
Trigger: ATCCAGTGGGTATTCCAGCCAGTCGAATACACCCAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTACTGTGGAGCAACTaGAGTTCGTTGTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVVLWSN*SSLFLS
Trigger: GCTCAGGAACAACGAACTCCAGTTGCTCCACAGTAC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTCACAGAGGCAGGCTaGCTTTCACTCTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVTEAG*LSLSIS
Trigger: TGAAATGGAGAGTGAAAGCCAGCCTGCCTCTGTGAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTACAATTGTGTGTATGTaGCTGCACAGCAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVTIVCM*LHSSRH
Trigger: GTGCCTGCTGCTGTGCAGCCACATACACACAATTGT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTACCCTAGCCACATTGTaGACTCCGTTTCTAGATCCG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVTLATL*TPFLDP
Trigger: CGGATCTAGAAACGGAGTCCACAATGTGGCTAGGGT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTTGGTCCAGTTCGTCTaGGTATTAAGGTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLVQFV*VLRSEK
Trigger: CTTCTCCGACCTTAATACTCAGACGAACTGGACCAA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTTCCAACAAAAACATTaGTCACGCTGTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHFQQKH*SRCAWG
Trigger: ACCCCAGGCACAGCGTGATCAATGTTTTTGTTGGAA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCACTGGATGGAGAAATaGCTCTGTGTGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHHWMEK*LCVTSL
Trigger: CAGAGAAGTCACACAGAGTCATTTCTCCATCCAGTG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTTTCGGATGCTTCTCTaGATCGACCCCACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHFRMLL*IDPTCF
Trigger: AAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTTTCGGATGCTTCTCTaGATCGACCCCACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVFRMLL*IDPTCF
Trigger: AAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCACTTCAGTTGTCAATaGCCTCAGCTGCTACTCAAG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVHFSCQ*PQLLLK
Trigger: CTTGAGTAGCAGCTGAGGTCATTGACAACTGAAGTG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCAGCACAGACATGTTaGCAGAGGAACCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSAQTC*QRNLRS
Trigger: ACTTCTCAGGTTCCTCTGGCAACATGTCTGTGCTGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCGGATCTTCCTGCATaGCCGTGTAGTCAATGTAAT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPDLPA*PCSQCN
Trigger: ATTACATTGACTACACGGGCATGCAGGAAGATCCGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCTCAACTGCACCATCTaGAATGCTTCCGTGGTTATC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLNCTI*NASVVI
Trigger: GATAACCACGGAAGCATTGCAGATGGTGCAGTTGAG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAACCAGGTTACAGCATTaGCACTTCTACGTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVTRLQH*HFYVCH
Trigger: ATGACAAACGTAGAAGTGGCAATGCTGTAACCTGGT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGAGCTCTCCATCACTaGGAAACAGCCTCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRALHH*ETASLS
Trigger: AGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCTTTGTTGGACGTTTaGTCCAAACTGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSLLDV*SKLQLL
Trigger: GAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCAGCATCCTCTTTGTTaGACGTTTGGTCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHQHPLC*TFGPNC
Trigger: GCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGAACCTGTATTCGGCTaGAGTCTGAAGGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVEPVFG*SLKEPE
Trigger: TTCAGGTTCCTTCAGACTCCAGCCGAATACAGGTTC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR GCA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAACCAGCAACTCTACTaGCTCTTTCTTGAAGTAACA +
Preference number: 4 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVNQQLY*LFLEVT
Trigger: TGTTACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATATCTGTGTGTTCTGTaGATTAAGAACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVYLCVL*IKNQQL
Trigger: GAGTTGCTGGTTCTTAATGCACAGAACACACAGATA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTCAATGACCTCAGCTaGTACTCAAGGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVNDLS*YSRRKF
Trigger: GAATTTCCTCCTTGAGTAGCAGCTGAGGTCATTGAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTCAACTCCTGGGATTTaGGTCTCAAAAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSTPGI*VSKVFQ
Trigger: CTGGAACACTTTTGAGACCCAAATCCCAGGAGTTGA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATTGTTACTTGTGGGAGTaGAATAGCCAGGAGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHCYLWE*NSQELL
Trigger: TAGCAACTCCTGGCTATTCCACTCCCACAAGTAACA...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCCTCTTTGTCTGCCTaGACAAGGAGGAGAAATTTA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVASLSA*TRRRNL
Trigger: TAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR TCA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAATAAACGTAATTCTCTaGAAGCAATTACCGCCTAGA +
Preference number: 4 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVINVIL*KQLPPR
Trigger: TCTAGGCGGTAATTGCTTTCAGAGAATTACGTTTAT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTTATACGGCATAGCTTaGGACCCATTCTCCCTATTT +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVLYGIA*DPFSLF
Trigger: AAATAGGGAGAATGGGTCCCAAGCTATGCCGTATAA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGAATGGTTTCGGGAGTaGTCATCATCTGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVEWFRE*SSSESL
Trigger: TAGAGATTCAGATGATGACCACTCCCGAAACCATTC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGAATGGTTTCGGGAGTaGTCATCATCTGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVEWFRE*SSSESL
Trigger: TAGAGATTCAGATGATGACCACTCCCGAAACCATTC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
3UTR CAA 72 bp CTAAAGAAACGATCTTTGTGCCAAATTAGTAGACAATaGCTCCAAATCTCTGGTCTTGACTTCCGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LKKRSLCQISRQ*LQISGLDFRLC
Trigger: ACACAACCGGAAGTCAAGACCAGAGATTTGGAGCAATTGTCTACTAATTTGGCACAAAGATCGTTTCTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR GCA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAACCAGCAACTCTACTaGCTCTTTCTTGAAGTAACA +
Preference number: 4 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHNQQLY*LFLEVT
Trigger: TGTTACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTATCTGTGTGTTCTGTaGATTAAGAACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVYLCVL*IKNQQL
Trigger: GAGTTGCTGGTTCTTAATGCACAGAACACACAGATA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CCA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTGGACGATGAGGAAATaGATACTGAAGATATCAGAG +
Preference number: 4 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVWTMRK*ILKISE
Trigger: CTCTGATATCTTCAGTATCCATTTCCTCATCGTCCA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR TCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGATAAACGTAATTCTCTaGAAGCAATTACCGCCTAGA +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVINVIL*KQLPPR
Trigger: TCTAGGCGGTAATTGCTTTCAGAGAATTACGTTTAT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR GCA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAAATTAGTAGACAATTaGTCCAAATCTCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVKLVDN*SKSLVL
Trigger: CAAGACCAGAGATTTGGAGCAATTGTCTACTAATTT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
3UTR CAA 72 bp TCAAAAGCCAATGCCACTTTTCTAAAGAAACGATCTTaGTGCCAAATTAGTAGACAATTGCTCCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: SKANATFLKKRS*CQISRQLLQIS
Trigger: AGAGATTTGGAGCAATTGTCTACTAATTTGGCACAAAGATCGTTTCTTTAGAAAAGTGGCATTGGCTTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS GCA 90 bp ACCGGGATTTTCACTCGGCGGTGGTCCAGGCGCGCAGCGGCGGCTTaGAGGGCGTCGAGGCGGCGGTGCAGCGCGGCGGTGCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: TGIFTRRWSRRAAAA*RASRRRCSAAVRWP
Trigger: GGGCCACCGCACCGCCGCGCTGCACCGCCGCCTCGACGCCCTGCAAGCCGCCGCTGCGCGCCTGGACCACCGCCGAGTGAAAATCCCGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491526.6
CDS GCA 90 bp GCTTGGATTTTCACTCGGCGGTGGTCCAGGCGCGCAGCGGCGGCTTaGAGGGCGTCGAGGCGGCGGTGCAGCGCGGCGGTGCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: AWIFTRRWSRRAAAA*RASRRRCSAAVRWP
Trigger: GGGCCACCGCACCGCCGCGCTGCACCGCCGCCTCGACGCCCTGCAAGCCGCCGCTGCGCGCCTGGACCACCGCCGAGTGAAAATCCAAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468095.2
CDS GCA 90 bp TGCTCTGGCTCCGGGAGCGGGGCAGCCAGGGCTCTTCCAAGTCACTaGAGGGGCTCTGGGAGGGCGAGCTGCCACTCTTGCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: CSGSGSGAARALPSH*RGSGRASCHSCLGG
Trigger: GCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCCCTGCAGTGACTTGGAAGAGCCCTGGCTGCCCCGCTCCCGGAGCCAGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CGGGAGCGGGGCAGCCAGGGCTCTTCCAAGTCACTGCAGGGGCTCTaGGAGGGCGAGCTGCCACTCTTGCCTGGGAGGCTCAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RERGSQGSSKSLQGL*EGELPLLPGRLSCS
Trigger: GCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCCCTGCAGTGACTTGGAAGAGCCCTGGCTGCCCCGCTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp TCATGGGGCTGCTCTGGATCCGGTTCCGCATGCTGTACCTGCTGCTaGCGGCAGAAGGCGGCGTTCGGCTGCGGCCGTACCTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SWGCSGSGSACCTCC*RQKAAFGCGRTWGR
Trigger: CCGGCCCCAGGTACGGCCGCAGCCGAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCATGCGGAACCGGATCCAGAGCAGCCCCATGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GAGCTCCAGGGCTGCGGCTCACAGGGCCACCACGCTCAGCCGCACTaGCATGGTCACCCTGACTCGAGCTCTTGGCAGGCGTCGGAAGCG +
Preference number: 5 (lower is better)
Translates to: ELQGCGSQGHHAQPH*HGHPDSSSWQASEA
Trigger: CGCTTCCGACGCCTGCCAAGAGCTCGAGTCAGGGTGACCATGGCAGTGCGGCTGAGCGTGGTGGCCCTGTGAGCCGCAGCCCTGGAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GGGCTCTGGGAGGGCGAGCTGCCACTCTTGCCTGGGAGGCTCAGCTaGAGCGAGTGCTGGAGTGTGGCGATCAGGCTCTCGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: GLWEGELPLLPGRLS*SECWSVAIRLSLST
Trigger: GGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GCCAGGGCTCTTCCAAGTCACTGCAGGGGCTCTGGGAGGGCGAGCTaGCACTCTTGCCTGGGAGGCTCAGCTGCAGCGAGTGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ARALPSHCRGSGRAS*HSCLGGSAAASAGV
Trigger: CACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCCCTGCAGTGACTTGGAAGAGCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TCCGCATGCTGTACCTGCTGCTGGCGGCAGAAGGCGGCGTTCGGCTaGGGCCGTACCTGGGGCCGGAAAAGGACAGACTCCGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: SACCTCCWRQKAAFG*GRTWGRKRTDSEAS
Trigger: TGATGCCTCGGAGTCTGTCCTTTTCCGGCCCCAGGTACGGCCGCAGCCGAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCATGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp CGGCTCACAGGGCCACCACGCTCAGCCGCACTGCCATGGTCACCCTaGCTCGAGCTCTTGGCAGGCGTCGGAAGCGAGCTTGTCACAGAG +
Preference number: 5 (lower is better)
Translates to: RLTGPPRSAALPWSP*LELLAGVGSELVTE
Trigger: CTCTGTGACAAGCTCGCTTCCGACGCCTGCCAAGAGCTCGAGTCAGGGTGACCATGGCAGTGCGGCTGAGCGTGGTGGCCCTGTGAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GAGGGCGAGCTGCCACTCTTGCCTGGGAGGCTCAGCTGCAGCGAGTaGTGGAGTGTGGCGATCAGGCTCTCGTTGAGCACCTGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: EGELPLLPGRLSCSE*WSVAIRLSLSTCPL
Trigger: CAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CAAGTCACTGCAGGGGCTCTGGGAGGGCGAGCTGCCACTCTTGCCTaGGAGGCTCAGCTGCAGCGAGTGCTGGAGTGTGGCGATCAGGCT +
Preference number: 5 (lower is better)
Translates to: QVTAGALGGRAATLA*EAQLQRVLECGDQA
Trigger: AGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCCCTGCAGTGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp CTTCCAAGTCACTGCAGGGGCTCTGGGAGGGCGAGCTGCCACTCTTaGCTGGGAGGCTCAGCTGCAGCGAGTGCTGGAGTGTGGCGATCA +
Preference number: 5 (lower is better)
Translates to: LPSHCRGSGRASCHS*LGGSAAASAGVWRS
Trigger: TGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCCCTGCAGTGACTTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CCACCGGGCACTTGGGGCATTGTGGCTCTGGACCCTTCTTGGACATaGCGGACTGGCCCGTTCCCAGTGGGCACCCCACTGCTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: PPGTWGIVALDPSWT*RTGPFPVGTPLLVE
Trigger: TTCAACCAGCAGTGGGGTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp ACTGAACCACCGGGCACTTGGGGCATTGTGGCTCTGGACCCTTCTTaGACATGGCGGACTGGCCCGTTCCCAGTGGGCACCCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: TEPPGTWGIVALDPS*TWRTGPFPVGTPLL
Trigger: CAGCAGTGGGGTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCGGTGGTTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp GGTGCTGCTCTTTCGGATGCTTCTCTGAATCGACCCCACTTGCTTTaGAGAGGCCAGGCTTGGGGCAGCGCCGGTGGGTGTCACGGGCGG +
Preference number: 5 (lower is better)
Translates to: GAALSDASLNRPHLL*RGQAWGSAGGCHGR
Trigger: CCGCCCGTGACACCCACCGGCGCTGCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp ACGGCTTCCCCTTCTCCCTCCGAGATGACGGTCATGGGGCTGCTCTaGATCCGGTTCCGCATGCTGTACCTGCTGCTGGCGGCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: TASPSPSEMTVMGLL*IRFRMLYLLLAAEG
Trigger: GCCTTCTGCCGCCAGCAGCAGGTACAGCATGCGGAACCGGATCCAGAGCAGCCCCATGACCGTCATCTCGGAGGGAGAAGGGGAAGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TGGCATGAGAGCCAGCTTGGGCTGCAGAACTCTCTTTTGCCTCCCTaGTGTGCACAGAGCCCTCCTCTCCCGTCGTGGGGCTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: WHESQLGLQNSLLPP*CAQSPPLPSWGWAQ
Trigger: CTGTGCCCAGCCCCACGACGGGAGAGGAGGGCTCTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCAGCCCAAGCTGGCTCTCATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp AGGGTGCGTGGCATGAGAGCCAGCTTGGGCTGCAGAACTCTCTTTTaGCTCCCTGCTGTGCACAGAGCCCTCCTCTCCCGTCGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: RVRGMRASLGCRTLF*LPAVHRALLSRRGA
Trigger: AGCCCCACGACGGGAGAGGAGGGCTCTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCAGCCCAAGCTGGCTCTCATGCCACGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CACCACGCTCAGCCGCACTGCCATGGTCACCCTGACTCGAGCTCTTaGCAGGCGTCGGAAGCGAGCTTGTCACAGAGGCAGGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: HHAQPHCHGHPDSSS*QASEASLSQRQAGF
Trigger: AAAGCCAGCCTGCCTCTGTGACAAGCTCGCTTCCGACGCCTGCCAAGAGCTCGAGTCAGGGTGACCATGGCAGTGCGGCTGAGCGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp AGGCTTGGGGCAGCGCCGGTGGGTGTCACGGGCGGGGAGGGAGAATaGTTTCGGGAGTGGTCATCATCTGAATCTCTACGGCCGAGGACT +
Preference number: 5 (lower is better)
Translates to: RLGAAPVGVTGGEGE*FREWSSSESLRPRT
Trigger: AGTCCTCGGCCGTAGAGATTCAGATGATGACCACTCCCGAAACCATTCTCCCTCCCCGCCCGTGACACCCACCGGCGCTGCCCCAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GGCTCAGCTGCAGCGAGTGCTGGAGTGTGGCGATCAGGCTCTCGTTaGGCACCTGCCCGTTGCACTGGCTGCTCTTCTTGGGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: GSAAASAGVWRSGSR*APARCTGCSSWESC
Trigger: GCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TGCAGCGAGTGCTGGAGTGTGGCGATCAGGCTCTCGTTGAGCACCTaGCCGTTGCACTGGCTGCTCTTCTTGGGAATCCTGCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: CSECWSVAIRLSLST*PLHWLLFLGILRRE
Trigger: CTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp TGGAGTGTGGCGATCAGGCTCTCGTTGAGCACCTGCCCGTTGCACTaGCTGCTCTTCTTGGGAATCCTGCGGAGGGAGTCTGTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: WSVAIRLSLSTCPLH*LLFLGILRRESVRE
Trigger: CTCCCGGACAGACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp ACGTTCTTGGCCCTAACTCTCCTCGCTCAGAGAACCGCCACACTGTaGGGAGGGCTCTCTGCCCTCTGCACTGGCTGTCCCATCCACAGG +
Preference number: 5 (lower is better)
Translates to: TFLALTLLAQRTATL*GGLSALCTGCPIHR
Trigger: CCTGTGGATGGGACAGCCAGTGCAGAGGGCAGAGAGCCCTCCCCACAGTGTGGCGGTTCTCTGAGCGAGGAGAGTTAGGGCCAAGAACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TGCTGGGAGACATGGATCCTGCAGCTCCTCCCTCAAGAACCGAGGTaGCAGGGTGCGTGGCATGAGAGCCAGCTTGGGCTGCAGAACTCT +
Preference number: 5 (lower is better)
Translates to: CWETWILQLLPQEPR*QGAWHESQLGLQNS
Trigger: AGAGTTCTGCAGCCCAAGCTGGCTCTCATGCCACGCACCCTGGCACCTCGGTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GACAGACTCCGAGGCATCAAGCCTTCGTTCTTGGCCCACTCCTCCTaGGCCCTTCTGTTCTTGCTTGGGGAGCAGCTTGACGGGCTCTCG +
Preference number: 5 (lower is better)
Translates to: DRLRGIKPSFLAHSS*ALLFLLGEQLDGLS
Trigger: CGAGAGCCCGTCAAGCTGCTCCCCAAGCAAGAACAGAAGGGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGATGCCTCGGAGTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp ATGTCTCCTGCAGGGCCGAGGGCACCCAGCCTCGGCTCAAGGGACTaGATGTTTGCCCTTGCTCCAGAACGCGGAAGACTATGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: MSPAGPRAPSLGSRD*MFALAPERGRLWKP
Trigger: TGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCGGCCCTGCAGGAGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TGCAGGGCCGAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTTTaGCCTTGCTCCAGAACGCGGAAGACTATGGAAGCCAGCATCACT +
Preference number: 5 (lower is better)
Translates to: CRAEGTQPRLKGLNV*PCSRTRKTMEASIT
Trigger: AGTGATGCTGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCGGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp AACCATGGGGACATTGGCTTCCACTCTGCTGGGAGACATGGATCCTaGAGCTCCTCCCTCAAGAACCGAGGTGCCAGGGTGCGTGGCATG +
Preference number: 5 (lower is better)
Translates to: NHGDIGFHSAGRHGS*SSSLKNRGARVRGM
Trigger: CATGCCACGCACCCTGGCACCTCGGTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp TCTGCGGAGGTGGTACCACCAGGAACAGTTTGGGCTTCTTGGAAATaGGGGGTGGCTTCCTGCTGGGTGAAGAGTCTGGGAGTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SAEVVPPGTVWASWK*GVASCWVKSLGVGW
Trigger: CCACCCCACTCCCAGACTCTTCACCCAGCAGGAAGCCACCCCCCATTTCCAAGAAGCCCAAACTGTTCCTGGTGGTACCACCTCCGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CCTGCTTGGGGGCTGGTGAGACATCAGGCTGAACCATGGGGACATTaGCTTCCACTCTGCTGGGAGACATGGATCCTGCAGCTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PAWGLVRHQAEPWGH*LPLCWETWILQLLP
Trigger: AGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CTGGCTCCTCCTGCTTGGGGGCTGGTGAGACATCAGGCTGAACCATaGGGACATTGGCTTCCACTCTGCTGGGAGACATGGATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LAPPAWGLVRHQAEP*GHWLPLCWETWILQ
Trigger: CTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp TTCTCGGCTGGCTCCTCCTGCTTGGGGGCTGGTGAGACATCAGGCTaGACCATGGGGACATTGGCTTCCACTCTGCTGGGAGACATGGAT +
Preference number: 5 (lower is better)
Translates to: FSAGSSCLGAGETSG*TMGTLASTLLGDMD
Trigger: ATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAGCCGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp AGTATCCGCACTGTTCTCGGCTGGCTCCTCCTGCTTGGGGGCTGGTaGGACATCAGGCTGAACCATGGGGACATTGGCTTCCACTCTGCT +
Preference number: 5 (lower is better)
Translates to: SIRTVLGWLLLLGGW*DIRLNHGDIGFHSA
Trigger: AGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAGCCGAGAACAGTGCGGATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GCCGAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTTTGCCCTTaGTCCAGAACGCGGAAGACTATGGAAGCCAGCATCACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: AEGTQPRLKGLNVCP*SRTRKTMEASITVK
Trigger: CTTGACAGTGATGCTGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GCAATCTGTGACAGGAGGTGGGGGAGGAAGGAAAGGAGACCTGTCTaGAGGACAAGGGAATGGAGGAGAGGGAACAGGAGGAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: AICDRRWGRKERRPV*RTREWRRGNRRRRR
Trigger: CCTCCTCCTCCTCCTGTTCCCTCTCCTCCATTCCCTTGTCCTGCAGACAGGTCTCCTTTCCTTCCTCCCCCACCTCCTGTCACAGATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp GACGGGCTCTCGGGGGCATCTGGGGAAGGCTCTGACCTCGACCTCTaGAATCTAGGGTCTGTGTTCTTGAGCATCTCTGCTGCAGACATG +
Preference number: 5 (lower is better)
Translates to: DGLSGASGEGSDLDL*NLGSVFLSISAADM
Trigger: CATGTCTGCAGCAGAGATGCTCAAGAACACAGACCCTAGATTCCAGAGGTCGAGGTCAGAGCCTTCCCCAGATGCCCCCGAGAGCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp CTGATTCTCCTCATGGAAGGTGGTACGACCTTCACATCCTCCGTCTaGCAGCTGGAGTCCCTGGTTTCTGAGCGCTGCCCAGCAGACCGA +
Preference number: 5 (lower is better)
Translates to: LILLMEGGTTFTSSV*QLESLVSERCPADR
Trigger: TCGGTCTGCTGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTCAGACGGAGGATGTGAAGGTCGTACCACCTTCCATGAGGAGAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GATCCCTGCAGAATCGCTCAGCACAGACATGTTGCCAGAGGAACCTaGGAAGTGGCCCATCTGGGCAGCAATGCCTTGCCCCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: DPCRIAQHRHVARGT*EVAHLGSNALPLLC
Trigger: GCACAGAAGGGGCAAGGCATTGCTGCCCAGATGGGCCACTTCTCAGGTTCCTCTGGCAACATGTCTGTGCTGAGCGATTCTGCAGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GGATTTGTATTCCCAGGGCTCCGAGCTGCTGTGCCCTCCGCCCCCTaGATAACTAGATTCACTCTTGCCATCCACATCTTGGGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: GFVFPGLRAAVPSAP*ITRFTLAIHILGVG
Trigger: GCCCACCCCCAAGATGTGGATGGCAAGAGTGAATCTAGTTATTCAGGGGGCGGAGGGCACAGCAGCTCGGAGCCCTGGGAATACAAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TTGTGGGTGACCTCTCTGGTAGAGGAAAGTGCCATTCATGTCTCCTaGAGGGCCGAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTT +
Preference number: 5 (lower is better)
Translates to: LWVTSLVEESAIHVS*RAEGTQPRLKGLNV
Trigger: AACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCGGCCCTGCAGGAGACATGAATGGCACTTTCCTCTACCAGAGAGGTCACCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp CTGGTGAGACATCAGGCTGAACCATGGGGACATTGGCTTCCACTCTaGTGGGAGACATGGATCCTGCAGCTCCTCCCTCAAGAACCGAGG +
Preference number: 5 (lower is better)
Translates to: LVRHQAEPWGHWLPL*WETWILQLLPQEPR
Trigger: CCTCGGTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp TCCTCATGGAAGGTGGTACGACCTTCACATCCTCCGTCTGACAGCTaGAGTCCCTGGTTTCTGAGCGCTGCCCAGCAGACCGACAGCTAT +
Preference number: 5 (lower is better)
Translates to: SSWKVVRPSHPPSDS*SPWFLSAAQQTDSY
Trigger: ATAGCTGTCGGTCTGCTGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTCAGACGGAGGATGTGAAGGTCGTACCACCTTCCATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CGGGTTCACCAGGGGAATGAGGGTCTAAGTCCTGTGAAAGAATGGTaGCATGGCCCTCATTCCAGTGGCGACCGGGAGACTGAGGATCAC +
Preference number: 5 (lower is better)
Translates to: RVHQGNEGLSPVKEW*HGPHSSGDRETEDH
Trigger: GTGATCCTCAGTCTCCCGGTCGCCACTGGAATGAGGGCCATGCCACCATTCTTTCACAGGACTTAGACCCTCATTCCCCTGGTGAACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp GTGCGGGTTCACCAGGGGAATGAGGGTCTAAGTCCTGTGAAAGAATaGTGGCATGGCCCTCATTCCAGTGGCGACCGGGAGACTGAGGAT +
Preference number: 5 (lower is better)
Translates to: VRVHQGNEGLSPVKE*WHGPHSSGDRETED
Trigger: ATCCTCAGTCTCCCGGTCGCCACTGGAATGAGGGCCATGCCACCATTCTTTCACAGGACTTAGACCCTCATTCCCCTGGTGAACCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp GTGAGACATCAGGCTGAACCATGGGGACATTGGCTTCCACTCTGCTaGGAGACATGGATCCTGCAGCTCCTCCCTCAAGAACCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: VRHQAEPWGHWLPLC*ETWILQLLPQEPRC
Trigger: GCACCTCGGTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp AGAAGTGGCCCATCTGGGCAGCAATGCCTTGCCCCTTCTGTGCCCTaGTTCTCCTCATGGAAGGTGGTACGACCTTCACATCCTCCGTCT +
Preference number: 5 (lower is better)
Translates to: RSGPSGQQCLAPSVP*FSSWKVVRPSHPPS
Trigger: AGACGGAGGATGTGAAGGTCGTACCACCTTCCATGAGGAGAATCAGGGCACAGAAGGGGCAAGGCATTGCTGCCCAGATGGGCCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp TCCTGGGTCGACTGGGGGTCATTACCTCATCATTCCCGTCTTCCTTaGGGAAGTCACAGGCCTCTGAGGATGAACCGGCTGCGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: SWVDWGSLPHHSRLP*GSHRPLRMNRLRWS
Trigger: AGACCAACGCAGCCGGTTCATCCTCAGAGGCCTGTGACTTCCTCAAGGAAGACGGGAATGATGAGGTAATGACCCCCAGTCGACCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GCTTTGAAGTTGTCACTGCTGGTGCTGCTCTTTCGGATGCTTCTCTaGATCGACCCCACTTGCTTTGGAGAGGCCAGGCTTGGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: ALKLSLLVLLFRMLL*IDPTCFGEARLGAA
Trigger: CGCTGCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGCACCAGCAGTGACAACTTCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp CTAAGTTTTCATCTGCTTGTGGGTGACCTCTCTGGTAGAGGAAAGTaGCATTCATGTCTCCTGCAGGGCCGAGGGCACCCAGCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: LSFHLLVGDLSGRGK*HSCLLQGRGHPASA
Trigger: AGCCGAGGCTGGGTGCCCTCGGCCCTGCAGGAGACATGAATGGCACTTTCCTCTACCAGAGAGGTCACCCACAAGCAGATGAAAACTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp GGGTCAAGCCAGGCACCCAGTTTACAGTTCACCCACACGGTTACTTaGGAGAAATCAAAGAGCTCAGCTCACTCGCCCCAGCACAGGGCA +
Preference number: 5 (lower is better)
Translates to: GSSQAPSLQFTHTVT*EKSKSSAHSPQHRA
Trigger: TGCCCTGTGCTGGGGCGAGTGAGCTGAGCTCTTTGATTTCTCCCAAGTAACCGTGTGGGTGAACTGTAAACTGGGTGCCTGGCTTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGGCGAGCTGCCACTCTaGCCTGGGAGGCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLGELPL*PGRLSC
Trigger: GCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp TGGCGTTGGCCGCAAAGGTGGGTCCCTGAGAGTAGTACTGAGAACTaGGGTAGCCATCATGCCGCAACTTATCGCATTCCCTCAGTACTG +
Preference number: 5 (lower is better)
Translates to: WRWPQRWVPESSTEN*GSHHAATYRIPSVL
Trigger: CAGTACTGAGGGAATGCGATAAGTTGCGGCATGATGGCTACCGCAGTTCTCAGTACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS GCA 90 bp GGGAAGGGAATACGATCCCTGCAGAATCGCTCAGCACAGACATGTTaGCAGAGGAACCTGAGAAGTGGCCCATCTGGGCAGCAATGCCTT +
Preference number: 5 (lower is better)
Translates to: GKGIRSLQNRSAQTC*QRNLRSGPSGQQCL
Trigger: AAGGCATTGCTGCCCAGATGGGCCACTTCTCAGGTTCCTCTGGCAACATGTCTGTGCTGAGCGATTCTGCAGGGATCGTATTCCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp CTGGGCTGGGCTCTGTATATCCAGTTTTCGTCATCCACTTCCACCTaGTGCCCACAAACCGAGAGCTCTCCATCACTGCGAAACAGCCTC +
Preference number: 5 (lower is better)
Translates to: LGWALYIQFSSSTST*CPQTESSPSLRNSL
Trigger: GAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTTGTGGGCAGCAGGTGGAAGTGGATGACGAAAACTGGATATACAGAGCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CCA 90 bp TTCTCTGGTGACATGATCTTTGGTTTGACTGAACCACCGGGCACTTaGGGCATTGTGGCTCTGGACCCTTCTTGGACATGGCGGACTGGC +
Preference number: 5 (lower is better)
Translates to: FSGDMIFGLTEPPGT*GIVALDPSWTWRTG
Trigger: GCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCGGTGGTTCAGTCAAACCAAAGATCATGTCACCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACAGAATGGGCTGGCGTaGGCCGCAAAGGTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLQNGLA*AAKVGP
Trigger: GGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCACCCCACTGCTGGTaGAACAGCCCCCTGCCGGGT +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLAPHCW*NSPLPG
Trigger: ACCCGGCAGGGGGCTGTTCAACCAGCAGTGGGGTGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGGCTCTGGACCCTTCTaGGACATGGCGGACTGGCCC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLGSGPF*DMADWP
Trigger: GGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp TTGTTCCTGAGCTGTTCGTTCAGACAACTGTGCCGCCTCAGCGCCTaGGTTCTTTCTCACGGGCCTCAACTGCACCATCTGCAATGCTTC +
Preference number: 5 (lower is better)
Translates to: LFLSCSFRQLCRLSA*VLSHGPQLHHLQCF
Trigger: GAAGCATTGCAGATGGTGCAGTTGAGGCCCGTGAGAAAGAACTCAGGCGCTGAGGCGGCACAGTTGTCTGAACGAACAGCTCAGGAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp CCCAGGTCCTCTCCACGAGCCTGCTGTTTCCCTCTTAGACAACGCTaGCAGTCAGGCACCGCATTATCCAAAAAGACGGCTTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: PRSSPRACCFPLRQR*QSGTALSKKTASVS
Trigger: TGACACAGAAGCCGTCTTTTTGGATAATGCGGTGCCTGACTGTCAGCGTTGTCTAAGAGGGAAACAGCAGGCTCGTGGAGAGGACCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS GCA 90 bp AGGGCTTCGCTCACGTTCTCTGCGGGCTCCACTGCAAAATCTTTCTaGGGAGGTGGTACCACCAGGAACAGTTTGGGCTTCTTGGAAATG +
Preference number: 5 (lower is better)
Translates to: RASLTFSAGSTAKSF*GGGTTRNSLGFLEM
Trigger: CATTTCCAAGAAGCCCAAACTGTTCCTGGTGGTACCACCTCCGCAGAAAGATTTTGCAGTGGAGCCCGCAGAGAACGTGAGCGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp CATCTTGGTAATCATCACAGAATGGGCTGGCGTTGGCCGCAAAGGTaGGTCCCTGAGAGTAGTACTGAGAACTGCGGTAGCCATCATGCC +
Preference number: 5 (lower is better)
Translates to: HLGNHHRMGWRWPQR*VPESSTENCGSHHA
Trigger: GGCATGATGGCTACCGCAGTTCTCAGTACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATGATTACCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 90 bp TCCTTGGTAGAAGGCGGCCTCAAGGATCCCCGGGAGGATTCTGGCTaGCCAGAATTTGTGAAAGGCGGCCTGGTGTCTTTCATGAATTTG +
Preference number: 5 (lower is better)
Translates to: SLVEGGLKDPREDSG*PEFVKGGLVSFMNL
Trigger: CAAATTCATGAAAGACACCAGGCCGCCTTTCACAAATTCTGGCCAGCCAGAATCCTCCCGGGGATCCTTGAGGCCGCCTTCTACCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACTTGCCATCCACATCTaGGGGGTGGGCTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLAIHI*GVGWEG
Trigger: GCCTTCCCAGCCCACCCCCAAGATGTGGATGGCAAG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGCTGGTCTCCTCCTaGGTAGAAGGCGGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLLVSS*VEGGLK
Trigger: CTTGAGGCCGCCTTCTACCAAGGAGGAGACCAGCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCGACCCCACTTGCTTaGGAGAGGCCAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSTPLA*ERPGLG
Trigger: CCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCCCTTCTGTTCTTGCTaGGGGAGCAGCTTGACGGGC +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHPFCSC*GSSLTG
Trigger: GCCCGTCAAGCTGCTCCCCAAGCAAGAACAGAAGGG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GCATGTGATGAGCCAGAACTTTTACTTTCCCGCTGTCCCGCACTCTaGGCAGTGGGAATAGCGATGACCTCGGAAGAGGAAGACAGTGTG +
Preference number: 5 (lower is better)
Translates to: ACDEPELLLSRCPAL*AVGIAMTSEEEDSV
Trigger: CACACTGTCTTCCTCTTCCGAGGTCATCGCTATTCCCACTGCTCAGAGTGCGGGACAGCGGGAAAGTAAAAGTTCTGGCTCATCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GGCGACCGGGAGACTGAGGATCACCTTTCACAGCATGCCTGGAGATaGGGTGGTCTCTGGATTTTATCCTTGCATGTGATGAGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GDRETEDHLSQHAWR*GGLWILSLHVMSQN
Trigger: GTTCTGGCTCATCACATGCAAGGATAAAATCCAGAGACCACCTCATCTCCAGGCATGCTGTGAAAGGTGATCCTCAGTCTCCCGGTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GATGGCTTTAAGTGGTACTGTGGAGCAACTGGAGTTCGTTGTTCCTaGGCTGTTCGTTCAGACAACTGTGCCGCCTCAGCGCCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: DGFKWYCGATGVRCS*AVRSDNCAASAPEF
Trigger: GAACTCAGGCGCTGAGGCGGCACAGTTGTCTGAACGAACAGCTCAGGAACAACGAACTCCAGTTGCTCCACAGTACCACTTAAAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp TGTCACGGGCGGGGAGGGAGAATGGTTTCGGGAGTGGTCATCATCTaGATCTCTACGGCCGAGGACTTTCCTTTTGGATCTGTGAATAGC +
Preference number: 5 (lower is better)
Translates to: CHGRGGRMVSGVVII*ISTAEDFPFGSVNS
Trigger: GCTATTCACAGATCCAAAAGGAAAGTCCTCGGCCGTAGAGATTCAGATGATGACCACTCCCGAAACCATTCTCCCTCCCCGCCCGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp GGGCGCTGGTGTCTGAACGACTGCCCTTTTTCAGCAGCAGAGCTTTaGAGTTGTCACTGCTGGTGCTGCTCTTTCGGATGCTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: GRWCLNDCPFSAAEL*SCHCWCCSFGCFSE
Trigger: TTCAGAGAAGCATCCGAAAGAGCAGCACCAGCAGTGACAACTTCAAAGCTCTGCTGCTGAAAAAGGGCAGTCGTTCAGACACCAGCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 90 bp CCCAGGTCCTCTCCACGAGCCTGCTGTTTCCCTCTTAGACAACGCTaGCAGTCAGGCACCGCATTATCCAAAAAGACGGCTTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: PRSSPRACCFPLRQR*QSGTALSKKTAWIF
Trigger: GAAAATCCAAGCCGTCTTTTTGGATAATGCGGTGCCTGACTGTCAGCGTTGTCTAAGAGGGAAACAGCAGGCTCGTGGAGAGGACCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468095.2
CDS GCA 90 bp GGCTGGGCTCTGTATATCCAGTTTTCGTCATCCACTTCCACCTGCTaGCCACAAACCGAGAGCTCTCCATCACTGCGAAACAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GWALYIQFSSSTSTC*PQTESSPSLRNSLF
Trigger: AAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTTGTGGGCAGCAGGTGGAAGTGGATGACGAAAACTGGATATACAGAGCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CCA 90 bp CACGTCAGCCTGGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTaGTGTTGGCAGTGGAAGCGACTTGGTCCAGTTCGTCTGAGTATT +
Preference number: 5 (lower is better)
Translates to: HVSLDCLGLLSHLLF*CWQWKRLGPVRLSI
Trigger: AATACTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 90 bp TGGCCAGTGCCTGATGCAGTTATGTTAATAGGCACCACGTCAGCCTaGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: WPVPDAVMLIGTTSA*TVWACCRIFSSGVG
Trigger: GCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGCATCAGGCACTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342260.9
ENST00000427025.6
CDS CCA 90 bp GAGCTCTTGGCAGGCGTCGGAAGCGAGCTTGTCACAGAGGCAGGCTaGCTTTCACTCTCCATTTCATTTGTGCTATTTCGGGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: ELLAGVGSELVTEAG*LSLSISFVLFRDFR
Trigger: CCTGAAATCCCGAAATAGCACAAATGAAATGGAGAGTGAAAGCCAGCCTGCCTCTGTGACAAGCTCGCTTCCGACGCCTGCCAAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCGATCAGGCTCTCGTaGAGCACCTGCCCGTTGCAC +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLAIRLS*STCPLH
Trigger: GTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCTGGTACCTTGGGCTaGGGCTTCCCCTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSGTLG*GFPFPF
Trigger: AAACGGGAAGGGGAAGCCCAAGCCCAAGGTACCAGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTGCCTCCCCAGCGCTaGGAGCTCCAGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLPPQR*ELQGCG
Trigger: GCCGCAGCCCTGGAGCTCCAAGCGCTGGGGAGGCAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCTGCCTCCCCAGCGCTaGGAGCTCCAGGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVLPPQR*ELQGCG
Trigger: GCCGCAGCCCTGGAGCTCCAAGCGCTGGGGAGGCAG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGCTGGCTCCTCCTGCTaGGGGGCTGGTGAGACATCA +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLAGSSC*GAGETS
Trigger: TGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAGC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGAATCGACCCCACTaGCTTTGGAGAGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLNRPH*LWRGQA
Trigger: AGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTGCGCCCTTCTGTTCTaGCTTGGGGAGCAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHCALLF*LGEQLD
Trigger: GTCAAGCTGCTCCCCAAGCAAGAACAGAAGGGCGCA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTTaGTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: AVMLIGTTSAWTVWA*CRIFSSGVGSGSDL
Trigger: CAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342260.9
ENST00000427025.6
CDS GCA 90 bp CCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTTaGTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGCGACTTG +
Preference number: 5 (lower is better)
Translates to: PVMLIGTTSAWTVWA*CRIFSSGVGSGSDL
Trigger: CAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000426841.6
CDS GCA 90 bp CATCCACTTCCACCTGCTGCCCACAAACCGAGAGCTCTCCATCACTaGGAAACAGCCTCTTTGTCTGCCTGGACAAGGAGGAGAAATTTA +
Preference number: 5 (lower is better)
Translates to: HPLPPAAHKPRALHH*ETASLSAWTRRRNL
Trigger: TAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTTGTGGGCAGCAGGTGGAAGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CCA 90 bp AGCCTGGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTaGCAGTGGAAGCGACTTGGTCCAGTTCGTCTGAGTATTAAGGTC +
Preference number: 5 (lower is better)
Translates to: SLDCLGLLSHLLFWC*QWKRLGPVRLSIKV
Trigger: GACCTTAATACTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 90 bp CCTGATGCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTaGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: PDAVMLIGTTSAWTV*ACCRIFSSGVGSGS
Trigger: GCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGCATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342260.9
ENST00000427025.6
CDS CCA 90 bp TTCTCCCCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTaGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: FSPVMLIGTTSAWTV*ACCRIFSSGVGSGS
Trigger: GCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS CCA 90 bp AGCCATCGTGGTCCTCAGAATACAGCGACCCAGCATCCTCTTTGTTaGACGTTTGGTCCAAACTGCAGCTGCTCATGTTACTTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SHRGPQNTATQHPLC*TFGPNCSCSCYLWE
Trigger: CTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGCTGTATTCTGAGGACCACGATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp AGCGTACCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTaGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SVPVMLIGTTSAWTV*ACCRIFSSGVGSGS
Trigger: GCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGTACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426841.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTGAGGTTGAGCTTGGCTaGGCGGTGCAGGTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLEVELG*AVQVLN
Trigger: GTTGAGGACCTGCACCGCCAAGCCAAGCTCAACCTC...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGATTTGAGGTTGAGCTaGGCTTGGCGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLDLRLS*AWRCRS
Trigger: GGACCTGCACCGCCAAGCCAAGCTCAACCTCAAATC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACAGAATGGGCTGGCGTaGGCCGCAAAGGTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVQNGLA*AAKVGP
Trigger: GGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCAAGGGACTGAATGTTaGCCCTTGCTCCAGAACGCG +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHQGTEC*PLLQNA
Trigger: CGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCTGCTGGTCTCCTCCTaGGTAGAAGGCGGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLLVSS*VEGGLK
Trigger: CTTGAGGCCGCCTTCTACCAAGGAGGAGACCAGCAG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCGTCGGAAGCGAGCTaGTCACAGAGGCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVASEAS*SQRQAG
Trigger: GCCAGCCTGCCTCTGTGACAAGCTCGCTTCCGACGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGATGAACCGGCTGCGTaGGTCTCCGGCACCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVDEPAA*VSGTPA
Trigger: AGCTGGGGTGCCGGAGACCAACGCAGCCGGTTCATC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATGCTTGGGGAGCAGCTaGACGGGCTCTCGGGGGCAT +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVCLGSS*TGSRGH
Trigger: ATGCCCCCGAGAGCCCGTCAAGCTGCTCCCCAAGCA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp GACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTaGAAGCGACTTGGTCCAGTTCGTCTGAGTATTAAGGTCGGAGAA +
Preference number: 5 (lower is better)
Translates to: DCLGLLSHLLFWCWQ*KRLGPVRLSIKVGE
Trigger: TTCTCCGACCTTAATACTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 90 bp CGATCGAAATTCTCCCCAGTTATGTTAATAGGCACCACGTCAGCCTaGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: RSKFSPVMLIGTTSA*TVWACCRIFSSGVG
Trigger: GCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGGGAGAATTTCGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS CCA 90 bp AGTGGGAATAGCGATGACCTCGGAAGAGGAAGACAGTGTGGCATTTaGGATGATGCTGGTGGAGTAGGTTGCATGAGGAGAAACCACACA +
Preference number: 5 (lower is better)
Translates to: SGNSDDLGRGRQCGI*DDAGGVGCMRRNHT
Trigger: TGTGTGGTTTCTCCTCATGCAACCTACTCCACCAGCATCATCCCAAATGCCACACTGTCTTCCTCTTCCGAGGTCATCGCTATTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp TGGGCTGGGAAGGCCAGGTTGTTTCTACAATTATACGGCATAGCTTaGGACCCATTCTCCCTATTTGCTGGAGCATTTAGAGGGACGGCT +
Preference number: 5 (lower is better)
Translates to: WAGKARLFLQLYGIA*DPFSLFAGAFRGTA
Trigger: AGCCGTCCCTCTAAATGCTCCAGCAAATAGGGAGAATGGGTCCCAAGCTATGCCGTATAATTGTAGAAACAACCTGGCCTTCCCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTGGACTGTTTGGGCTaGCTGTCGCATCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLDCLG*LSHLLF
Trigger: GAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTTGCCATCCACATCTaGGGGGTGGGCTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLAIHI*GVGWEG
Trigger: GCCTTCCCAGCCCACCCCCAAGATGTGGATGGCAAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCCATTACCTGAGGATTaGTATTCCCAGGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHPLPED*YSQGSE
Trigger: CTCGGAGCCCTGGGAATACAAATCCTCAGGTAATGG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGGCGAGCTGCCACTCTaGCCTGGGAGGCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVGELPL*PGRLSC
Trigger: GCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCCGTGTACTCTGACTaGACGCTGCTTGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSVYSD*TLLVSL
Trigger: GAGTGACACAAGCAGCGTCAAGTCAGAGTACACGGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCACCCCACTGCTGGTaGAACAGCCCCCTGCCGGGT +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHAPHCW*NSPLPG
Trigger: ACCCGGCAGGGGGCTGTTCAACCAGCAGTGGGGTGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACTGCAGAACTCTCTTTaGCCTCCCTGCTGTGCACAG +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLQNSL*PPCCAQ
Trigger: CTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCAG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGCTGGCTCCTCCTGCTaGGGGGCTGGTGAGACATCA +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVAGSSC*GAGETS
Trigger: TGATGTCTCACCAGCCCCCAAGCAGGAGGAGCCAGC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp GCGACCCAGCATCCTCTTTGTTGGACGTTTGGTCCAAACTGCAGCTaGTCATGTTACTTGTGGGAGTGGAATAGCCAGGAGTTGCTAAAT +
Preference number: 5 (lower is better)
Translates to: ATQHPLCWTFGPNCS*SCYLWEWNSQELLN
Trigger: ATTTAGCAACTCCTGGCTATTCCACTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp AATACAGCGACCCAGCATCCTCTTTGTTGGACGTTTGGTCCAAACTaGAGCTGCTCATGTTACTTGTGGGAGTGGAATAGCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: NTATQHPLCWTFGPN*SCSCYLWEWNSQEL
Trigger: CAACTCCTGGCTATTCCACTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGCTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 90 bp CCACAAACCGAGAGCTCTCCATCACTGCGAAACAGCCTCTTTGTCTaGCTGGACAAGGAGGAGAAATTTATCCAACTTACAGCACGTGAG +
Preference number: 5 (lower is better)
Translates to: PQTESSPSLRNSLFV*LDKEEKFIQLTARE
Trigger: CTCACGTGCTGTAAGTTGGATAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CCA 90 bp TTTCTTCATCTTCATCTTGGTAATCATCACAGAATGGGCTGGCGTTaGCCGCAAAGGTGGGTCCCTGAGAGTAGTACTGAGAACTGCGGT +
Preference number: 5 (lower is better)
Translates to: FLHLHLGNHHRMGWR*PQRWVPESSTENCG
Trigger: ACCGCAGTTCTCAGTACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATGATTACCAAGATGAAGATGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 90 bp TTGTCAGGACTTTGCAAAACACAAAGCCAAGGCACCCCGACTCTTTaGCGTGTCCCTAGCATCCCAAATTGTAATCCTACTCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LSGLCKTQSQGTPTL*RVPSIPNCNPTPLL
Trigger: CAGGAGAGGAGTAGGATTACAATTTGGGATGCTAGGGACACGCCAAAGAGTCGGGGTGCCTTGGCTTTGTGTTTTGCAAAGTCCTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCCCTCAGTACTGATTaGAGGTTGAGCTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSLSTD*RLSLAW
Trigger: CCAAGCCAAGCTCAACCTCAAATCAGTACTGAGGGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACTGGACTGTTTGGGCTaGCTGTCGCATCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLDCLG*LSHLLF
Trigger: GAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACCATTACCTGAGGATTaGTATTCCCAGGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLPLPED*YSQGSE
Trigger: CTCGGAGCCCTGGGAATACAAATCCTCAGGTAATGG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATGGAATAGCCAGGAGTaGCTAAATGCGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLWNSQE*LNAASG
Trigger: CCCTGAAGCCGCATTTAGCAACTCCTGGCTATTCCA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGACCCAGCATCCTCTTaGTTGGACGTTTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHDPASS*LDVWSK
Trigger: TTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAATTGGACCGGTCCCCTaGGTTTTTCTGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLIGPVP*VFLSSS
Trigger: GGAAGAGCTCAGAAAAACCAAGGGGACCGGTCCAAT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACACTGGCTGCTCTTCTaGGGAATCCTGCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVHWLLF*GILRRE
Trigger: CTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTATCCGTGTACTCTGACTaGACGCTGCTTGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSVYSD*TLLVSL
Trigger: GAGTGACACAAGCAGCGTCAAGTCAGAGTACACGGA...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGGCTCTGGACCCTTCTaGGACATGGCGGACTGGCCC +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVGSGPF*DMADWP
Trigger: GGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACGGGCACTTGGGGCATaGTGGCTCTGGACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVRALGA*WLWTLL
Trigger: AAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCGTCGGAAGCGAGCTaGTCACAGAGGCAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHASEAS*SQRQAG
Trigger: GCCAGCCTGCCTCTGTGACAAGCTCGCTTCCGACGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTGCTTGGGGAGCAGCTaGACGGGCTCTCGGGGGCAT +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVCLGSS*TGSRGH
Trigger: ATGCCCCCGAGAGCCCGTCAAGCTGCTCCCCAAGCA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAATCAAGCCTTCGTTCTaGGCCCACTCCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVIKPSF*AHSSCA
Trigger: GGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGAT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAATCAAGCCTTCGTTCTaGGCCCACTCCTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVIKPSF*AHSSCA
Trigger: GGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGAT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTTTCCTCATCTAGGTaGGAAACCGCTTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLSSSR*ETAFLG
Trigger: GCCCAGAAAAGCGGTTTCCAACCTAGATGAGGAAAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS TCA 90 bp TTCTCTTCTGGTGTTGGCAGTGGAAGCGACTTGGTCCAGTTCGTCTaGGTATTAAGGTCGGAGAAGTCACTTGAGGCTGGTGTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: FSSGVGSGSDLVQFV*VLRSEKSLEAGVLG
Trigger: ACCTAAAACACCAGCCTCAAGTGACTTCTCCGACCTTAATACTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 90 bp GATCTGTTTCTTCATCTTCATCTTGGTAATCATCACAGAATGGGCTaGCGTTGGCCGCAAAGGTGGGTCCCTGAGAGTAGTACTGAGAAC +
Preference number: 5 (lower is better)
Translates to: DLFLHLHLGNHHRMG*RWPQRWVPESSTEN
Trigger: GTTCTCAGTACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATGATTACCAAGATGAAGATGAAGAAACAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 90 bp TTTAAAAACACAGGCACAGGGGTGAGTGCTGTGGGTGTATTCGACTaGCTGGAATACCCACTGGATGGAGAAATGACTCTGTGTGACTTC +
Preference number: 5 (lower is better)
Translates to: FKNTGTGVSAVGVFD*LEYPLDGEMTLCDF
Trigger: GAAGTCACACAGAGTCATTTCTCCATCCAGTGGGTATTCCAGCCAGTCGAATACACCCACAGCACTCACCCCTGTGCCTGTGTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 90 bp AAACCGAGAGCTCTCCATCACTGCGAAACAGCCTCTTTGTCTGCCTaGACAAGGAGGAGAAATTTATCCAACTTACAGCACGTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: KPRALHHCETASLSA*TRRRNLSNLQHVRE
Trigger: CTCTCTCACGTGCTGTAAGTTGGATAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTACTGAATGTTTGCCCTaGCTCCAGAACGCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLTECLP*LQNAED
Trigger: GTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACCTCAACTCCTGGGATTaGGGTCTCAAAAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHLNSWD*GLKSVP
Trigger: TGGAACACTTTTGAGACCCAAATCCCAGGAGTTGAG...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTACTCTTTGTTGGACGTTaGGTCCAAACTGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLLFVGR*VQTAAA
Trigger: AGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAG...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAAGCCATCACTGCTATaGCACAGATTCCCAGATCCA +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHKPSLL*HRFPDP
Trigger: TGGATCTGGGAATCTGTGCAATAGCAGTGATGGCTT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACGCAGGGGAGGCTTCTTaGCTTTCTTCAAAGAGATGT +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHAGEAS*LSSKRC
Trigger: ACATCTCTTTGAAGAAAGCAAAGAAGCCTCCCCTGC...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCGATCAGGCTCTCGTaGAGCACCTGCCCGTTGCAC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVAIRLS*STCPLH
Trigger: GTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAGTGTCTTTCATGAATTaGGGGTCAAGAGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLVSFMN*GSRGGA
Trigger: TGCCCCACCTCTTGACCCCAAATTCATGAAAGACAC...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAGCAACTGGAGTTCGTaGTTCCTGAGCTGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLSNWSS*FLSCSF
Trigger: GAACGAACAGCTCAGGAACAACGAACTCCAGTTGCT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTTCATTCCCGTCTTCCTaGAGGAAGTCACAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLSFPSS*RKSQAS
Trigger: AGAGGCCTGTGACTTCCTCAAGGAAGACGGGAATGA...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCGACCCCACTTGCTTaGGAGAGGCCAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSTPLA*ERPGLG
Trigger: CCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGAGGTTGAGCTTGGCTaGGCGGTGCAGGTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVEVELG*AVQVLN
Trigger: GTTGAGGACCTGCACCGCCAAGCCAAGCTCAACCTC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACAAGGGACTGAATGTTaGCCCTTGCTCCAGAACGCG +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVQGTEC*PLLQNA
Trigger: CGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACATTATACGGCATAGCTaGGGACCCATTCTCCCTATT +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHIIRHS*GPILPI
Trigger: AATAGGGAGAATGGGTCCCAAGCTATGCCGTATAAT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCTCTTTGTTGGACGTTaGGTCCAAACTGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLLFVGR*VQTAAA
Trigger: AGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCGGGCACTTGGGGCATaGTGGCTCTGGACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVRALGA*WLWTLL
Trigger: AAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCCCTTCTGTTCTTGCTaGGGGAGCAGCTTGACGGGC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHPFCSC*GSSLTG
Trigger: GCCCGTCAAGCTGCTCCCCAAGCAAGAACAGAAGGG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAGGGAGAGTTACGTTCTaGGCCCTAACTCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVGRVTF*ALTLLA
Trigger: AGCGAGGAGAGTTAGGGCCAAGAACGTAACTCTCCC...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGGGAGAGTTACGTTCTaGGCCCTAACTCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVGRVTF*ALTLLA
Trigger: AGCGAGGAGAGTTAGGGCCAAGAACGTAACTCTCCC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAACACCATCACTTCAGTaGTCAATGACCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLTPSLQ*SMTSAA
Trigger: AGCAGCTGAGGTCATTGACAACTGAAGTGATGGTGT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGATTTGAGGTTGAGCTaGGCTTGGCGGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHDLRLS*AWRCRS
Trigger: GGACCTGCACCGCCAAGCCAAGCTCAACCTCAAATC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATCTTCTCTTCTGGTGTaGGCAGTGGAAGCGACTTGG +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSSLLV*AVEATW
Trigger: CCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTCAGCACAGACATGTaGCCAGAGGAACCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLSTDM*PEEPEK
Trigger: CTTCTCAGGTTCCTCTGGCAACATGTCTGTGCTGAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAACTGAATGTTTGCCCTaGCTCCAGAACGCGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVTECLP*LQNAED
Trigger: GTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATGCTGGTGGAGTAGGTaGCATGAGGAGAAACCACAC +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVCWWSR*HEEKPH
Trigger: GTGTGGTTTCTCCTCATGCAACCTACTCCACCAGCA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATGGAATAGCCAGGAGTaGCTAAATGCGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVWNSQE*LNAASG
Trigger: CCCTGAAGCCGCATTTAGCAACTCCTGGCTATTCCA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATCATTCCCGTCTTCCTaGAGGAAGTCACAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVSFPSS*RKSQAS
Trigger: AGAGGCCTGTGACTTCCTCAAGGAAGACGGGAATGA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTGAATCGACCCCACTaGCTTTGGAGAGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLNRPH*LWRGQA
Trigger: AGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTGCGCCCTTCTGTTCTaGCTTGGGGAGCAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVCALLF*LGEQLD
Trigger: GTCAAGCTGCTCCCCAAGCAAGAACAGAAGGGCGCA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTCACCAGGTTACAGCATaGCCACTTCTACGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLHQVTA*PLLRLS
Trigger: TGACAAACGTAGAAGTGGCAATGCTGTAACCTGGTG...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTACACCATCACTTCAGTaGTCAATGACCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLTPSLQ*SMTSAA
Trigger: AGCAGCTGAGGTCATTGACAACTGAAGTGATGGTGT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTCAGCCTGGACTGTTaGGGCTTGCTGTCGCATCTT +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVSLDC*GLLSHL
Trigger: AAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACCAGCATCCTCTTTGTaGGACGTTTGGTCCAAACTG +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVPASSL*DVWSKL
Trigger: CAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGCTTCCCCTTCCCGTTaGCTGGTGACACTGATTTTA +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVASPSR*LVTLIL
Trigger: TAAAATCAGTGTCACCAGCAAACGGGAAGGGGAAGC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCTGCAGAACTCTCTTTaGCCTCCCTGCTGTGCACAG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLQNSL*PPCCAQ
Trigger: CTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCAG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp AAAATCAGGCTACAATTGTGTGTATGTGGCTGCACAGCAGCAGGCACCAGGTTAAAAATCAGGCTACAATaGTGTGTATGTGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: KIRLQLCVCGCTAAGTRLKIRLQ*CVCGCT
Trigger: TGTGCAGCCACATACACACAATTGTAGCCTGATTTT...TAACCTGGTGCCTGCTGCTGTGCAGCCACATACACACAATTGTAGCCTGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTACACCCACACGGTTACTaGGGAGAAATCAAAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVHPHGY*GEIKEL
Trigger: GAGCTCTTTGATTTCTCCCAAGTAACCGTGTGGGTG...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACAAGTCTCATAATGATTaGACCCATGCAGTCCAACTT +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHKSHND*THAVQL
Trigger: AAGTTGGACTGCATGGGTCAAATCATTATGAGACTT...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS TCA 90 bp CGACTTGGTCCAGTTCGTCTGAGTATTAAGGTCGGAGAAGTCACTTaGGGCTGGTGTTTTAGGTCTCCTGATGGAAATAAATCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RLGPVRLSIKVGEVT*GWCFRSPDGNKSFF
Trigger: GAAGAAAGATTTATTTCCATCAGGAGACCTAAAACACCAGCCTCAAGTGACTTCTCCGACCTTAATACTCAGACGAACTGGACCAAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000491526.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGTACTGATTTGAGGTaGAGCTTGGCTTGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSTDLR*SLAWRC
Trigger: GCACCGCCAAGCCAAGCTCAACCTCAAATCAGTACT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCTTCTCTTCTGGTGTaGGCAGTGGAAGCGACTTGG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSSLLV*AVEATW
Trigger: CCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCTCAGCACAGACATGTaGCCAGAGGAACCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVLSTDM*PEEPEK
Trigger: CTTCTCAGGTTCCTCTGGCAACATGTCTGTGCTGAG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTGCTGGTGGAGTAGGTaGCATGAGGAGAAACCACAC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVCWWSR*HEEKPH
Trigger: GTGTGGTTTCTCCTCATGCAACCTACTCCACCAGCA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAACCCATTCTCCCTATTaGCTGGAGCATTTAGAGGGA +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVTHSPY*LEHLEG
Trigger: TCCCTCTAAATGCTCCAGCAAATAGGGAGAATGGGT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTATTGGACCGGTCCCCTaGGTTTTTCTGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVIGPVP*VFLSSS
Trigger: GGAAGAGCTCAGAAAAACCAAGGGGACCGGTCCAAT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCCAGCAGTGTATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACTCAAGTGACAGGAAATaGCCTAATGGAAGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: SSSVSLTPFQPFPSLYVHSSDRK*PNGSLN
Trigger: GTTTAAACTTCCATTAGGCAATTTCCTGTCACTTGA...GTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATACACTGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTAAAACGCTGGGTTTTTaGCGTTGGCCCAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVKTLGF*RWPRSS
Trigger: AGAGGACCTGGGCCAACGCAAAAAACCCAGCGTTTT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATCCAAATCTCTGGTCTaGACTTCCGGTTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSKSLV*TSGCVK
Trigger: CTTCACACAACCGGAAGTCAAGACCAGAGATTTGGA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTCCCTCAGTACTGATTaGAGGTTGAGCTTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVSLSTD*RLSLAW
Trigger: CCAAGCCAAGCTCAACCTCAAATCAGTACTGAGGGA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCAGACCGACAGCTATaGAACCTTCCTAGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVADRQL*NLPSVE
Trigger: CTCTACACTAGGAAGGTTCAATAGCTGTCGGTCTGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCAGACCGACAGCTATaGAACCTTCCTAGTGTAGAG +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHADRQL*NLPSVE
Trigger: CTCTACACTAGGAAGGTTCAATAGCTGTCGGTCTGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTAAGCTCCTTCTGTATGTaGTCAGGGACTCCTGTAATA +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVSSFCM*SGTPVI
Trigger: TATTACAGGAGTCCCTGACAACATACAGAAGGAGCT...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGCTGGGAAGGCCAGGTaGTTTCTACAATTATACGGC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHAGKAR*FLQLYG
Trigger: GCCGTATAATTGTAGAAACAACCTGGCCTTCCCAGC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCTGGGAAGGCCAGGTaGTTTCTACAATTATACGGC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVAGKAR*FLQLYG
Trigger: GCCGTATAATTGTAGAAACAACCTGGCCTTCCCAGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGCCAGCATCCTCTTTGTaGGACGTTTGGTCCAAACTG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVPASSL*DVWSKL
Trigger: CAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGG...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGACCCAGCATCCTCTTaGTTGGACGTTTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVDPASS*LDVWSK
Trigger: TTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGCTTCCCCTTCCCGTTaGCTGGTGACACTGATTTTA +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVASPSR*LVTLIL
Trigger: TAAAATCAGTGTCACCAGCAAACGGGAAGGGGAAGC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATGTGTCTTTCATGAATTaGGGGTCAAGAGGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHVSFMN*GSRGGA
Trigger: TGCCCCACCTCTTGACCCCAAATTCATGAAAGACAC...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATAGCAACTGGAGTTCGTaGTTCCTGAGCTGTTCGTTC +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHSNWSS*FLSCSF
Trigger: GAACGAACAGCTCAGGAACAACGAACTCCAGTTGCT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAGTACTTGTCAGGACTTaGCAAAACACAAAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVVLVRT*QNTKPR
Trigger: CCTTGGCTTTGTGTTTTGCAAAGTCCTGACAAGTAC...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS CCA 90 bp AAATTTATCCAACTTACAGCACGTGAGAGAGAACCTGTATTCGGCTaGAGTCTGAAGGAACCTGAAGAGCCTTCCTTTTTCATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KFIQLTAREREPVFG*SLKEPEEPSFFIFF
Trigger: AAAGAAGATGAAAAAGGAAGGCTCTTCAGGTTCCTTCAGACTCCAGCCGAATACAGGTTCTCTCTCACGTGCTGTAAGTTGGATAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS-3UTR CAA 90 bp TATCACTTACTCCTTTCCAACCCTTCCCCTCTCTCTATGTCCACACCATCACTTAGACAGAGAACACTTTaGATCTGTTTCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: YHLLLSNPSPLSMSTPSLRQRTL*ICFFIF
Trigger: GAAGATGAAGAAACAGATCAAAAGTGTTCTCTGTCT...AAGTGATGGTGTGGACATAGAGAGAGGGGAAGGGTTGGAAAGGAGTAAGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCTCAACTCCTGGGATTaGGGTCTCAAAAGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVLNSWD*GLKSVP
Trigger: TGGAACACTTTTGAGACCCAAATCCCAGGAGTTGAG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTAAGCCATCACTGCTATaGCACAGATTCCCAGATCCA +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVKPSLL*HRFPDP
Trigger: TGGATCTGGGAATCTGTGCAATAGCAGTGATGGCTT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGGCAGGGGAGGCTTCTTaGCTTTCTTCAAAGAGATGT +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVAGEAS*LSSKRC
Trigger: ACATCTCTTTGAAGAAAGCAAAGAAGCCTCCCCTGC...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTCACCAGGTTACAGCATaGCCACTTCTACGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVHQVTA*PLLRLS
Trigger: TGACAAACGTAGAAGTGGCAATGCTGTAACCTGGTG...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTAAAAATCAGGCTACAATaGTGTGTATGTGGCTGCACA +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVKIRLQ*CVCGCT
Trigger: TGTGCAGCCACATACACACAATTGTAGCCTGATTTT...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGGTCTTGACTTCCGGTaGTGTGAAGAGCAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVGLDFR*CEEQCF
Trigger: AAAACACTGCTCTTCACACAACCGGAAGTCAAGACC...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACTTTCCTCATCTAGGTaGGAAACCGTTTTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVLSSSR*ETVFFL
Trigger: TAAGAAGAAAACGGTTTCCAACCTAGATGAGGAAAG...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATATTATACGGCATAGCTaGGGACCCATTCTCCCTATT +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHIIRHS*GPILPI
Trigger: AATAGGGAGAATGGGTCCCAAGCTATGCCGTATAAT...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp GGACTCCGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTATCATTTCAGGAGTACTaGTCAGGACTTTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: GLRYSTKLKSGLLSSISVSFQEY*SGLCKT
Trigger: TGTTTTGCAAAGTCCTGACAAGTACTCCTGAAATGA...TACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACGGAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTTTACCCTAGCCACATaGTGGACTCCGTTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVFTLAT*WTPFLD
Trigger: ATCTAGAAACGGAGTCCACAATGTGGCTAGGGTAAA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS-3UTR CAA 90 bp CTGTGTGTTCTGTGCATTAAGAACCAGCAACTCTACTGCCTCTTTCTTGAAGTATTCTTCATCTTCATCTaGGTAATCATCACAGAATGG +
Preference number: 5 (lower is better)
Translates to: LCVLCIKNQQLYCLFLEVFFIFI*VIITEW
Trigger: CCATTCTGTGATGATTACCAAGATGAAGATGAAGAA...TACTTCAAGAAAGAGGCAGTAGAGTTGCTGGTTCTTAATGCACAGAACACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCTGAGGTTGAGTTTATaGTCAGGCAGTTACAAACCA +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHLRLSL*SGSYKP
Trigger: TGGTTTGTAACTGCCTGACAATAAACTCAACCTCAG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTAGTTTAAGCTTCTACTaGTTCTTAAGCCACAGGGCA +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSLSFY*FLSHRA
Trigger: TGCCCTGTGGCTTAAGAACAAGTAGAAGCTTAAACT...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGTTCTTCATCTTCATCTaGGTAATCATCACAGAATGG +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVFFIFI*VIITEW
Trigger: CCATTCTGTGATGATTACCAAGATGAAGATGAAGAA...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTGTTTGTGAGACAGAGAACACTTTaGATCTGTTTCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: LPSLSLACFLLFLYMLFVRQRTL*ICFFIF
Trigger: GAAGATGAAGAAACAGATCAAAAGTGTTCTCTGTCT...CACAAACAACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp CGTTACTCTACCAAGCTTAAGTCTGGCTTGCTTTCTTCTATTTCTGTACATGTTTCAAGTGACAGGAAATaGCCTAATGGAAGTTTAAAC +
Preference number: 5 (lower is better)
Translates to: RYSTKLKSGLLSSISVHVSSDRK*PNGSLN
Trigger: GTTTAAACTTCCATTAGGCAATTTCCTGTCACTTGA...AACATGTACAGAAATAGAAGAAAGCAAGCCAGACTTAAGCTTGGTAGAGTAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS-3UTR CAA 90 bp TCTAAGTACATGGAAGTTAAGGGAGTAAGGGTGGGGGTAATGAGATTATTACATCAAATTAGTAGACAATaGCTCCAAATCTCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SKYMEVKGVRVGVMRLLHQISRQ*LQISGL
Trigger: AAGACCAGAGATTTGGAGCAATTGTCTACTAATTTG...ATGTAATAATCTCATTACCCCCACCCTTACTCCCTTAACTTCCATGTACTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS CAA 90 bp GGCTTGGATTTTCACTCGGCGGTGGTCCAGGCGCGCAGCGGCGGCTaGCAGGGCGTCGAGGCGGCGGTGCAGCGCGGCGGTGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GLDFHSAVVQARSGG*QGVEAAVQRGGAVA
Trigger: GGCCACCGCACCGCCGCGCTGCACCGCCGCCTCGACGCCCTGCAAGCCGCCGCTGCGCGCCTGGACCACCGCCGAGTGAAAATCCAAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468095.2
CDS CAA 90 bp AACCGGGATTTTCACTCGGCGGTGGTCCAGGCGCGCAGCGGCGGCTaGCAGGGCGTCGAGGCGGCGGTGCAGCGCGGCGGTGCGGTGGCC +
Preference number: 6 (lower is better)
Translates to: NRDFHSAVVQARSGG*QGVEAAVQRGGAVA
Trigger: GGCCACCGCACCGCCGCGCTGCACCGCCGCCTCGACGCCCTGCAAGCCGCCGCTGCGCGCCTGGACCACCGCCGAGTGAAAATCCCGGTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491526.6
CDS GCA 72 bp GGCTGCGGCTCACAGGGCCACCACGCTCAGCCGCACTaGCATGGTCACCCTGACTCGAGCTCTTGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: GCGSQGHHAQPH*HGHPDSSSWQA
Trigger: CGCCTGCCAAGAGCTCGAGTCAGGGTGACCATGGCAGTGCGGCTGAGCGTGGTGGCCCTGTGAGCCGCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp TGGGGCTGCTCTGGATCCGGTTCCGCATGCTGTACCTaGTGCTGGCGGCAGAAGGCGGCGTTCGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: WGCSGSGSACCT*CWRQKAAFGCG
Trigger: GCCGCAGCCGAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCATGCGGAACCGGATCCAGAGCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GCAGGGGCTCTGGGAGGGCGAGCTGCCACTCTTGCCTaGGAGGCTCAGCTGCAGCGAGTGCTGGAGTGTGGC +
Preference number: 6 (lower is better)
Translates to: AGALGGRAATLA*EAQLQRVLECG
Trigger: GCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTCCCAGAGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CTGAATCGACCCCACTTGCTTTGGAGAGGCCAGGCTTaGGGCAGCGCCGGTGGGTGTCACGGGCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: LNRPHLLWRGQA*GSAGGCHGRGG
Trigger: CCCTCCCCGCCCGTGACACCCACCGGCGCTGCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp TGTACCTGCTGCTGGCGGCAGAAGGCGGCGTTCGGCTaGGGCCGTACCTGGGGCCGGAAAAGGACAGACTCC +
Preference number: 6 (lower is better)
Translates to: CTCCWRQKAAFG*GRTWGRKRTDS
Trigger: GGAGTCTGTCCTTTTCCGGCCCCAGGTACGGCCGCAGCCGAACGCCGCCTTCTGCCGCCAGCAGCAGGTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp TGCTCTGGATCCGGTTCCGCATGCTGTACCTGCTGCTaGCGGCAGAAGGCGGCGTTCGGCTGCGGCCGTACC +
Preference number: 6 (lower is better)
Translates to: CSGSGSACCTCC*RQKAAFGCGRT
Trigger: GGTACGGCCGCAGCCGAACGCCGCCTTCTGCCGCCAGCAGCAGGTACAGCATGCGGAACCGGATCCAGAGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp GAGGGCGAGCTGCCACTCTTGCCTGGGAGGCTCAGCTaGAGCGAGTGCTGGAGTGTGGCGATCAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: EGELPLLPGRLS*SECWSVAIRLS
Trigger: CGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAGCTCGCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp ACCCTTCTTGGACATGGCGGACTGGCCCGTTCCCAGTaGGCACCCCACTGCTGGTTGAACAGCCCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: TLLGHGGLARSQ*APHCWLNSPLP
Trigger: CGGCAGGGGGCTGTTCAACCAGCAGTGGGGTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CCGGGCACTTGGGGCATTGTGGCTCTGGACCCTTCTTaGACATGGCGGACTGGCCCGTTCCCAGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: PGTWGIVALDPS*TWRTGPFPVGT
Trigger: GGTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp TCTGCGATGGCGTGGCCCCGCACAGGGAGTAGACATTaGGGGTGGTGGCGGAAGTCATGCTGCTGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: SAMAWPRTGSRH*GWWRKSCCCQH
Trigger: GTGCTGGCAGCAGCATGACTTCCGCCACCACCCCCAATGTCTACTCCCTGTGCGGGGCCACGCCATCGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp ACCGGGCACTTGGGGCATTGTGGCTCTGGACCCTTCTaGGACATGGCGGACTGGCCCGTTCCCAGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: TGHLGHCGSGPF*DMADWPVPSGH
Trigger: GTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp CAGGGTGCGTGGCATGAGAGCCAGCTTGGGCTGCAGAACTCTCTTTaGCCTCCCTGCTGTGCACAGAGCCCTCCTCTCCCGTCGTGGGGC +
Preference number: 6 (lower is better)
Translates to: QGAWHESQLGLQNSL*PPCCAQSPPLPSWG
Trigger: GCCCCACGACGGGAGAGGAGGGCTCTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCAGCCCAAGCTGGCTCTCATGCCACGCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CTGCCACTCTTGCCTGGGAGGCTCAGCTGCAGCGAGTaGTGGAGTGTGGCGATCAGGCTCTCGTTGAGCACC +
Preference number: 6 (lower is better)
Translates to: LPLLPGRLSCSE*WSVAIRLSLST
Trigger: GGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCTCCCAGGCAAGAGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp ACTTGGGGCATTGTGGCTCTGGACCCTTCTTGGACATaGCGGACTGGCCCGTTCCCAGTGGGCACCCCACTG +
Preference number: 6 (lower is better)
Translates to: TWGIVALDPSWT*RTGPFPVGTPL
Trigger: CAGTGGGGTGCCCACTGGGAACGGGCCAGTCCGCCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GGAAGTCACAGGCCTCTGAGGATGAACCGGCTGCGTTaGTCTCCGGCACCCCAGCTGCTCCGTCCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: GSHRPLRMNRLR*SPAPQLLRPVE
Trigger: CTCAACAGGACGGAGCAGCTGGGGTGCCGGAGACCAACGCAGCCGGTTCATCCTCAGAGGCCTGTGACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CCTTCTCCCTCCGAGATGACGGTCATGGGGCTGCTCTaGATCCGGTTCCGCATGCTGTACCTGCTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: PSPSEMTVMGLL*IRFRMLYLLLA
Trigger: CGCCAGCAGCAGGTACAGCATGCGGAACCGGATCCAGAGCAGCCCCATGACCGTCATCTCGGAGGGAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp TCTTGGCCCACTCCTCCTGCGCCCTTCTGTTCTTGCTaGGGGAGCAGCTTGACGGGCTCTCGGGGGCATCTG +
Preference number: 6 (lower is better)
Translates to: SWPTPPAPFCSC*GSSLTGSRGHL
Trigger: CAGATGCCCCCGAGAGCCCGTCAAGCTGCTCCCCAAGCAAGAACAGAAGGGCGCAGGAGGAGTGGGCCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp ATCAGGCTCTCGTTGAGCACCTGCCCGTTGCACTGGCTGCTCTTCTaGGGAATCCTGCGGAGGGAGTCTGTCCGGGAGGGTGGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: IRLSLSTCPLHWLLF*GILRRESVREGGRG
Trigger: TCCCCTGCCACCCTCCCGGACAGACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp ACATGGATCCTGCAGCTCCTCCCTCAAGAACCGAGGTaGCAGGGTGCGTGGCATGAGAGCCAGCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: TWILQLLPQEPR*QGAWHESQLGL
Trigger: CAGCCCAAGCTGGCTCTCATGCCACGCACCCTGGCACCTCGGTTCTTGAGGGAGGAGCTGCAGGATCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp TCGTTGAGCACCTGCCCGTTGCACTGGCTGCTCTTCTaGGGAATCCTGCGGAGGGAGTCTGTCCGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: SLSTCPLHWLLF*GILRRESVREG
Trigger: ACCCTCCCGGACAGACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp CTGCAGGGCCGAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTTaGCCCTTGCTCCAGAACGCGGAAGACTATGGAAGCCAGCATCAC +
Preference number: 6 (lower is better)
Translates to: LQGRGHPASAQGTEC*PLLQNAEDYGSQHH
Trigger: GTGATGCTGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCGGCCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp GAGTGCTGGAGTGTGGCGATCAGGCTCTCGTTGAGCACCTGCCCGTaGCACTGGCTGCTCTTCTTGGGAATCCTGCGGAGGGAGTCTGTC +
Preference number: 6 (lower is better)
Translates to: ECWSVAIRLSLSTCP*HWLLFLGILRRESV
Trigger: GACAGACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp AGGCTCAGCTGCAGCGAGTGCTGGAGTGTGGCGATCAGGCTCTCGTaGAGCACCTGCCCGTTGCACTGGCTGCTCTTCTTGGGAATCCTG +
Preference number: 6 (lower is better)
Translates to: RLSCSECWSVAIRLS*STCPLHWLLFLGIL
Trigger: CAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCAGCTGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp TCCCTCAAGAACCGAGGTGCCAGGGTGCGTGGCATGAGAGCCAGCTaGGGCTGCAGAACTCTCTTTTGCCTCCCTGCTGTGCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: SLKNRGARVRGMRAS*GCRTLFCLPAVHRA
Trigger: GGCTCTGTGCACAGCAGGGAGGCAAAAGAGAGTTCTGCAGCCCAAGCTGGCTCTCATGCCACGCACCCTGGCACCTCGGTTCTTGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp ACTGCTGGTGCTGCTCTTTCGGATGCTTCTCTGAATCGACCCCACTaGCTTTGGAGAGGCCAGGCTTGGGGCAGCGCCGGTGGGTGTCAC +
Preference number: 6 (lower is better)
Translates to: TAGAALSDASLNRPH*LWRGQAWGSAGGCH
Trigger: GTGACACCCACCGGCGCTGCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGCACCAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp ACCTCTCTGGTAGAGGAAAGTGCCATTCATGTCTCCTaGAGGGCCGAGGGCACCCAGCCTCGGCTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: TSLVEESAIHVS*RAEGTQPRLKG
Trigger: TCCCTTGAGCCGAGGCTGGGTGCCCTCGGCCCTGCAGGAGACATGAATGGCACTTTCCTCTACCAGAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GCGATCAGGCTCTCGTTGAGCACCTGCCCGTTGCACTaGCTGCTCTTCTTGGGAATCCTGCGGAGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: AIRLSLSTCPLH*LLFLGILRRES
Trigger: AGACTCCCTCCGCAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CAGCTCCTCCCTCAAGAACCGAGGTGCCAGGGTGCGTaGCATGAGAGCCAGCTTGGGCTGCAGAACTCTCTT +
Preference number: 6 (lower is better)
Translates to: QLLPQEPRCQGA*HESQLGLQNSL
Trigger: AAGAGAGTTCTGCAGCCCAAGCTGGCTCTCATGCCACGCACCCTGGCACCTCGGTTCTTGAGGGAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CTTTCGGATGCTTCTCTGAATCGACCCCACTTGCTTTaGAGAGGCCAGGCTTGGGGCAGCGCCGGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: LSDASLNRPHLL*RGQAWGSAGGC
Trigger: ACACCCACCGGCGCTGCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp TGCAGCGAGTGCTGGAGTGTGGCGATCAGGCTCTCGTaGAGCACCTGCCCGTTGCACTGGCTGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: CSECWSVAIRLS*STCPLHWLLFL
Trigger: CAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCACTCGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp GCTGCTCTTTCGGATGCTTCTCTGAATCGACCCCACTaGCTTTGGAGAGGCCAGGCTTGGGGCAGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: AALSDASLNRPH*LWRGQAWGSAG
Trigger: ACCGGCGCTGCCCCAAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp GTGGCATGGCCCTCATTCCAGTGGCGACCGGGAGACTaGGGATCACCTTTCACAGCATGCCTGGAGATGAGG +
Preference number: 6 (lower is better)
Translates to: VAWPSFQWRPGD*GSPFTACLEMR
Trigger: CCTCATCTCCAGGCATGCTGTGAAAGGTGATCCTCAGTCTCCCGGTCGCCACTGGAATGAGGGCCATGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp GAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTTTaGCCTTGCTCCAGAACGCGGAAGACTATGGAAGCC +
Preference number: 6 (lower is better)
Translates to: EGTQPRLKGLNV*PCSRTRKTMEA
Trigger: GGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp TGCTGGAGTGTGGCGATCAGGCTCTCGTTGAGCACCTaGCCGTTGCACTGGCTGCTCTTCTTGGGAATCCTG +
Preference number: 6 (lower is better)
Translates to: CWSVAIRLSLST*PLHWLLFLGIL
Trigger: CAGGATTCCCAAGAAGAGCAGCCAGTGCAACGGGCAGGTGCTCAACGAGAGCCTGATCGCCACACTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp GACATTGGCTTCCACTCTGCTGGGAGACATGGATCCTaGAGCTCCTCCCTCAAGAACCGAGGTGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: DIGFHSAGRHGS*SSSLKNRGARV
Trigger: CACCCTGGCACCTCGGTTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp AAGGTGGTACGACCTTCACATCCTCCGTCTGACAGCTaGAGTCCCTGGTTTCTGAGCGCTGCCCAGCAGACC +
Preference number: 6 (lower is better)
Translates to: KVVRPSHPPSDS*SPWFLSAAQQT
Trigger: GGTCTGCTGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTCAGACGGAGGATGTGAAGGTCGTACCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GAAGGCGGCCTCAAGGATCCCCGGGAGGATTCTGGCTaGCCAGAATTTGTGAAAGGCGGCCTGGTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: EGGLKDPREDSG*PEFVKGGLVSF
Trigger: GAAAGACACCAGGCCGCCTTTCACAAATTCTGGCCAGCCAGAATCCTCCCGGGGATCCTTGAGGCCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CCTGCTTGGGGGCTGGTGAGACATCAGGCTGAACCATaGGGACATTGGCTTCCACTCTGCTGGGAGACATGG +
Preference number: 6 (lower is better)
Translates to: PAWGLVRHQAEP*GHWLPLCWETW
Trigger: CCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAGCCCCCAAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp CGAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTTaGCCCTTGCTCCAGAACGCGGAAGACTATGGAAGC +
Preference number: 6 (lower is better)
Translates to: RGHPASAQGTEC*PLLQNAEDYGS
Trigger: GCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp GGCCGAGGGCACCCAGCCTCGGCTCAAGGGACTGAATGTTTGCCCTaGCTCCAGAACGCGGAAGACTATGGAAGCCAGCATCACTGTCAA +
Preference number: 6 (lower is better)
Translates to: GRGHPASAQGTECLP*LQNAEDYGSQHHCQ
Trigger: TTGACAGTGATGCTGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTGCCCTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp GTCCTGGGTCGACTGGGGGTCATTACCTCATCATTCCCGTCTTCCTaGAGGAAGTCACAGGCCTCTGAGGATGAACCGGCTGCGTTGGTC +
Preference number: 6 (lower is better)
Translates to: VLGRLGVITSSFPSS*RKSQASEDEPAALV
Trigger: GACCAACGCAGCCGGTTCATCCTCAGAGGCCTGTGACTTCCTCAAGGAAGACGGGAATGATGAGGTAATGACCCCCAGTCGACCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp GGGGAAGGCTCTGACCTCGACCTCTGGAATCTAGGGTCTGTGTTCTaGAGCATCTCTGCTGCAGACATGCGGGCGCTGGTGTCTGAACGA +
Preference number: 6 (lower is better)
Translates to: GEGSDLDLWNLGSVF*SISAADMRALVSER
Trigger: TCGTTCAGACACCAGCGCCCGCATGTCTGCAGCAGAGATGCTCAAGAACACAGACCCTAGATTCCAGAGGTCGAGGTCAGAGCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp CACATCCTCCGTCTGACAGCTGGAGTCCCTGGTTTCTaGGCGCTGCCCAGCAGACCGACAGCTATTGAACCT +
Preference number: 6 (lower is better)
Translates to: HILRLTAGVPGF*ALPSRPTAIEP
Trigger: AGGTTCAATAGCTGTCGGTCTGCTGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTCAGACGGAGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp CTCATGGAAGGTGGTACGACCTTCACATCCTCCGTCTaGCAGCTGGAGTCCCTGGTTTCTGAGCGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LMEGGTTFTSSV*QLESLVSERCP
Trigger: TGGGCAGCGCTCAGAAACCAGGGACTCCAGCTGTCAGACGGAGGATGTGAAGGTCGTACCACCTTCCATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CATCTGCTTGTGGGTGACCTCTCTGGTAGAGGAAAGTaGCATTCATGTCTCCTGCAGGGCCGAGGGCACCCA +
Preference number: 6 (lower is better)
Translates to: HLLVGDLSGRGK*HSCLLQGRGHP
Trigger: TGGGTGCCCTCGGCCCTGCAGGAGACATGAATGGCACTTTCCTCTACCAGAGAGGTCACCCACAAGCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp GCCTCAGCGCCTGAGTTCTTTCTCACGGGCCTCAACTaGACCATCTGCAATGCTTCCGTGGTTATCAGGGGC +
Preference number: 6 (lower is better)
Translates to: ASAPEFFLTGLN*TICNASVVIRG
Trigger: GCCCCTGATAACCACGGAAGCATTGCAGATGGTGCAGTTGAGGCCCGTGAGAAAGAACTCAGGCGCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp TCGGAGGGCTTCGCTCACGTTCTCTGCGGGCTCCACTaGAAAATCTTTCTGCGGAGGTGGTACCACCAGGAA +
Preference number: 6 (lower is better)
Translates to: SEGFAHVLCGLH*KIFLRRWYHQE
Trigger: TTCCTGGTGGTACCACCTCCGCAGAAAGATTTTGCAGTGGAGCCCGCAGAGAACGTGAGCGAAGCCCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CACCAGGGGAATGAGGGTCTAAGTCCTGTGAAAGAATaGTGGCATGGCCCTCATTCCAGTGGCGACCGGGAG +
Preference number: 6 (lower is better)
Translates to: HQGNEGLSPVKE*WHGPHSSGDRE
Trigger: CTCCCGGTCGCCACTGGAATGAGGGCCATGCCACCATTCTTTCACAGGACTTAGACCCTCATTCCCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GGGCTGGTGAGACATCAGGCTGAACCATGGGGACATTaGCTTCCACTCTGCTGGGAGACATGGATCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GLVRHQAEPWGH*LPLCWETWILQ
Trigger: CTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATGTCTCACCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GGTGTCACGGGCGGGGAGGGAGAATGGTTTCGGGAGTaGTCATCATCTGAATCTCTACGGCCGAGGACTTTC +
Preference number: 6 (lower is better)
Translates to: GVTGGEGEWFRE*SSSESLRPRTF
Trigger: GAAAGTCCTCGGCCGTAGAGATTCAGATGATGACCACTCCCGAAACCATTCTCCCTCCCCGCCCGTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp TTCCCAGGGCTCCGAGCTGCTGTGCCCTCCGCCCCCTaGATAACTAGATTCACTCTTGCCATCCACATCTTG +
Preference number: 6 (lower is better)
Translates to: FPGLRAAVPSAP*ITRFTLAIHIL
Trigger: CAAGATGTGGATGGCAAGAGTGAATCTAGTTATTCAGGGGGCGGAGGGCACAGCAGCTCGGAGCCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp CAATGTAATAACCCCAGGGGTCCGTGTACTCTGACTTaGCGCTGCTTGTGTCACTCTGCGATGGCGTGGCCC +
Preference number: 6 (lower is better)
Translates to: QCNNPRGPCTLT*RCLCHSAMAWP
Trigger: GGGCCACGCCATCGCAGAGTGACACAAGCAGCGTCAAGTCAGAGTACACGGACCCCTGGGGTTATTACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp AGCTGTTCGTTCAGACAACTGTGCCGCCTCAGCGCCTaGGTTCTTTCTCACGGGCCTCAACTGCACCATCTG +
Preference number: 6 (lower is better)
Translates to: SCSFRQLCRLSA*VLSHGPQLHHL
Trigger: CAGATGGTGCAGTTGAGGCCCGTGAGAAAGAACTCAGGCGCTGAGGCGGCACAGTTGTCTGAACGAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp ACCCAGCCTCGGCTCAAGGGACTGAATGTTTGCCCTTaGTCCAGAACGCGGAAGACTATGGAAGCCAGCATC +
Preference number: 6 (lower is better)
Translates to: TQPRLKGLNVCP*SRTRKTMEASI
Trigger: GATGCTGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CATCAGGCTGAACCATGGGGACATTGGCTTCCACTCTaGTGGGAGACATGGATCCTGCAGCTCCTCCCTCAA +
Preference number: 6 (lower is better)
Translates to: HQAEPWGHWLPL*WETWILQLLPQ
Trigger: TTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CAGGGGAATGAGGGTCTAAGTCCTGTGAAAGAATGGTaGCATGGCCCTCATTCCAGTGGCGACCGGGAGACT +
Preference number: 6 (lower is better)
Translates to: QGNEGLSPVKEW*HGPHSSGDRET
Trigger: AGTCTCCCGGTCGCCACTGGAATGAGGGCCATGCCACCATTCTTTCACAGGACTTAGACCCTCATTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GTGGTACCACCAGGAACAGTTTGGGCTTCTTGGAAATaGGGGGTGGCTTCCTGCTGGGTGAAGAGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: VVPPGTVWASWK*GVASCWVKSLG
Trigger: TCCCAGACTCTTCACCCAGCAGGAAGCCACCCCCCATTTCCAAGAAGCCCAAACTGTTCCTGGTGGTACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CAGGCTGAACCATGGGGACATTGGCTTCCACTCTGCTaGGAGACATGGATCCTGCAGCTCCTCCCTCAAGAA +
Preference number: 6 (lower is better)
Translates to: QAEPWGHWLPLC*ETWILQLLPQE
Trigger: TTCTTGAGGGAGGAGCTGCAGGATCCATGTCTCCCAGCAGAGTGGAAGCCAATGTCCCCATGGTTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp CACCCAGCCTCGGCTCAAGGGACTGAATGTTTGCCCTaGCTCCAGAACGCGGAAGACTATGGAAGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: HPASAQGTECLP*LQNAEDYGSQH
Trigger: ATGCTGGCTTCCATAGTCTTCCGCGTTCTGGAGCAAGGGCAAACATTCAGTCCCTTGAGCCGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp CCATCTGGGCAGCAATGCCTTGCCCCTTCTGTGCCCTaGTTCTCCTCATGGAAGGTGGTACGACCTTCACAT +
Preference number: 6 (lower is better)
Translates to: PSGQQCLAPSVP*FSSWKVVRPSH
Trigger: ATGTGAAGGTCGTACCACCTTCCATGAGGAGAATCAGGGCACAGAAGGGGCAAGGCATTGCTGCCCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CCGCAAAGGTGGGTCCCTGAGAGTAGTACTGAGAACTaGGGTAGCCATCATGCCGCAACTTATCGCATTCCC +
Preference number: 6 (lower is better)
Translates to: PQRWVPESSTEN*GSHHAATYRIP
Trigger: GGGAATGCGATAAGTTGCGGCATGATGGCTACCGCAGTTCTCAGTACTACTCTCAGGGACCCACCTTTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 72 bp AATCATCACAGAATGGGCTGGCGTTGGCCGCAAAGGTaGGTCCCTGAGAGTAGTACTGAGAACTGCGGTAGC +
Preference number: 6 (lower is better)
Translates to: NHHRMGWRWPQR*VPESSTENCGS
Trigger: GCTACCGCAGTTCTCAGTACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 72 bp AAAAGGACAGACTCCGAGGCATCAAGCCTTCGTTCTTaGCCCACTCCTCCTGCGCCCTTCTGTTCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: KRTDSEASSLRS*PTPPAPFCSCL
Trigger: CAAGCAAGAACAGAAGGGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGATGCCTCGGAGTCTGTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp GAAAAGGACAGACTCCGAGGCATCAAGCCTTCGTTCTaGGCCCACTCCTCCTGCGCCCTTCTGTTCTTGCTT +
Preference number: 6 (lower is better)
Translates to: EKDRLRGIKPSF*AHSSCALLFLL
Trigger: AAGCAAGAACAGAAGGGCGCAGGAGGAGTGGGCCAAGAACGAAGGCTTGATGCCTCGGAGTCTGTCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp AAGTGGTACTGTGGAGCAACTGGAGTTCGTTGTTCCTaGGCTGTTCGTTCAGACAACTGTGCCGCCTCAGCG +
Preference number: 6 (lower is better)
Translates to: KWYCGATGVRCS*AVRSDNCAASA
Trigger: CGCTGAGGCGGCACAGTTGTCTGAACGAACAGCTCAGGAACAACGAACTCCAGTTGCTCCACAGTACCACTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp TTGTCACTGCTGGTGCTGCTCTTTCGGATGCTTCTCTaGATCGACCCCACTTGCTTTGGAGAGGCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: LSLLVLLFRMLL*IDPTCFGEARL
Trigger: AAGCCTGGCCTCTCCAAAGCAAGTGGGGTCGATTCAGAGAAGCATCCGAAAGAGCAGCACCAGCAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp AGCATCACTGTCAAGGCGGGAAGGGAATACGATCCCTaGAGAATCGCTCAGCACAGACATGTTGCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: SITVKAGREYDP*RIAQHRHVARG
Trigger: TCCTCTGGCAACATGTCTGTGCTGAGCGATTCTGCAGGGATCGTATTCCCTTCCCGCCTTGACAGTGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CGCTGTGCCTGGGGTTCCCAAAGCCATCACTGCTATTaGACAGATTCCCAGATCCATGTCCAGAGTCAGTGT +
Preference number: 6 (lower is better)
Translates to: RCAWGSQSHHCY*TDSQIHVQSQC
Trigger: ACACTGACTCTGGACATGGATCTGGGAATCTGTGCAATAGCAGTGATGGCTTTGGGAACCCCAGGCACAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CTGGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTaGTGTTGGCAGTGGAAGCGACTTGGTCCAGTTCGT +
Preference number: 6 (lower is better)
Translates to: LDCLGLLSHLLF*CWQWKRLGPVR
Trigger: ACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 72 bp GACATGATCTTTGGTTTGACTGAACCACCGGGCACTTaGGGCATTGTGGCTCTGGACCCTTCTTGGACATGG +
Preference number: 6 (lower is better)
Translates to: DMIFGLTEPPGT*GIVALDPSWTW
Trigger: CCATGTCCAAGAAGGGTCCAGAGCCACAATGCCCCAAGTGCCCGGTGGTTCAGTCAAACCAAAGATCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp ACAGGCACAGGGGTGAGTGCTGTGGGTGTATTCGACTaGCTGGAATACCCACTGGATGGAGAAATGACTCTG +
Preference number: 6 (lower is better)
Translates to: TGTGVSAVGVFD*LEYPLDGEMTL
Trigger: CAGAGTCATTTCTCCATCCAGTGGGTATTCCAGCCAGTCGAATACACCCACAGCACTCACCCCTGTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp CTGTTTGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTaGGCAGTGGAAGCGACTTGGTCCAGTTCGTCTGAG +
Preference number: 6 (lower is better)
Translates to: LFGLAVASSLLV*AVEATWSSSSE
Trigger: CTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CAA 72 bp GTTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTaGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: VNRHHVSLDCLG*LSHLLFWCWQW
Trigger: CCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CAA 72 bp CCATCCACATCTTGGGGGTGGGCTGGGAAGGCCAGGTaGTTTCTACAATTATACGGCATAGCTTGGGACCCA +
Preference number: 6 (lower is better)
Translates to: PSTSWGWAGKAR*FLQLYGIAWDP
Trigger: TGGGTCCCAAGCTATGCCGTATAATTGTAGAAACAACCTGGCCTTCCCAGCCCACCCCCAAGATGTGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp ACGCTGTGCCTGGGGTTCCCAAAGCCATCACTGCTATaGCACAGATTCCCAGATCCATGTCCAGAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: TLCLGFPKPSLL*HRFPDPCPESV
Trigger: CACTGACTCTGGACATGGATCTGGGAATCTGTGCAATAGCAGTGATGGCTTTGGGAACCCCAGGCACAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp GGTGTTGGCAGTGGAAGCGACTTGGTCCAGTTCGTCTaGGTATTAAGGTCGGAGAAGTCACTTGAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: GVGSGSDLVQFV*VLRSEKSLEAG
Trigger: ACCAGCCTCAAGTGACTTCTCCGACCTTAATACTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000491526.6
CDS TCA 72 bp GTAGTCAATGTAATAACCCCAGGGGTCCGTGTACTCTaGCTTGACGCTGCTTGTGTCACTCTGCGATGGCGT +
Preference number: 6 (lower is better)
Translates to: VVNVITPGVRVL*LDAACVTLRWR
Trigger: ACGCCATCGCAGAGTGACACAAGCAGCGTCAAGTCAGAGTACACGGACCCCTGGGGTTATTACATTGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp CGGGGAGGGAGAATGGTTTCGGGAGTGGTCATCATCTaGATCTCTACGGCCGAGGACTTTCCTTTTGGATCT +
Preference number: 6 (lower is better)
Translates to: RGGRMVSGVVII*ISTAEDFPFGS
Trigger: AGATCCAAAAGGAAAGTCCTCGGCCGTAGAGATTCAGATGATGACCACTCCCGAAACCATTCTCCCTCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp TCTCCACGAGCCTGCTGTTTCCCTCTTAGACAACGCTaGCAGTCAGGCACCGCATTATCCAAAAAGACGGCT +
Preference number: 6 (lower is better)
Translates to: SPRACCFPLRQR*QSGTALSKKTA
Trigger: AGCCGTCTTTTTGGATAATGCGGTGCCTGACTGTCAGCGTTGTCTAAGAGGGAAACAGCAGGCTCGTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS GCA 72 bp TTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTTaGTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LIGTTSAWTVWA*CRIFSSGVGSG
Trigger: TCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 72 bp CTTCATCTTGGTAATCATCACAGAATGGGCTGGCGTTaGCCGCAAAGGTGGGTCCCTGAGAGTAGTACTGAG +
Preference number: 6 (lower is better)
Translates to: LHLGNHHRMGWR*PQRWVPESSTE
Trigger: CTCAGTACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATGATTACCAAGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 72 bp TCAGGGGTGTACACTGAGTGGCCATCAGCATCATCTTaGCCAGTGCCTGATGCTAGCTCCTTCTGTATGTTG +
Preference number: 6 (lower is better)
Translates to: SGVYTEWPSASS*PVPDASSFCML
Trigger: CAACATACAGAAGGAGCTAGCATCAGGCACTGGCCAAGATGATGCTGATGGCCACTCAGTGTACACCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS CCA 72 bp AGCGATGACCTCGGAAGAGGAAGACAGTGTGGCATTTaGGATGATGCTGGTGGAGTAGGTTGCATGAGGAGA +
Preference number: 6 (lower is better)
Translates to: SDDLGRGRQCGI*DDAGGVGCMRR
Trigger: TCTCCTCATGCAACCTACTCCACCAGCATCATCCCAAATGCCACACTGTCTTCCTCTTCCGAGGTCATCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp GGTCCAAACTGCAGCTGCTCATGTTACTTGTGGGAGTaGAATAGCCAGGAGTTGCTAAATGCGGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: GPNCSCSCYLWE*NSQELLNAASG
Trigger: CCCTGAAGCCGCATTTAGCAACTCCTGGCTATTCCACTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CTCTGCGGGCTCCACTGCAAAATCTTTCTGCGGAGGTaGTACCACCAGGAACAGTTTGGGCTTCTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: LCGLHCKIFLRR*YHQEQFGLLGN
Trigger: ATTTCCAAGAAGCCCAAACTGTTCCTGGTGGTACCACCTCCGCAGAAAGATTTTGCAGTGGAGCCCGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp CGCAACTTATCGCATTCCCTCAGTACTGATTTGAGGTaGAGCTTGGCTTGGCGGTGCAGGTCCTCAACACAG +
Preference number: 6 (lower is better)
Translates to: RNLSHSLSTDLR*SLAWRCRSSTQ
Trigger: CTGTGTTGAGGACCTGCACCGCCAAGCCAAGCTCAACCTCAAATCAGTACTGAGGGAATGCGATAAGTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CAA 72 bp TCATGCCGCAACTTATCGCATTCCCTCAGTACTGATTaGAGGTTGAGCTTGGCTTGGCGGTGCAGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SCRNLSHSLSTD*RLSLAWRCRSS
Trigger: TGAGGACCTGCACCGCCAAGCCAAGCTCAACCTCAAATCAGTACTGAGGGAATGCGATAAGTTGCGGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CAA 90 bp CCCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTaGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGCGACTT +
Preference number: 6 (lower is better)
Translates to: PSYVNRHHVSLDCLG*LSHLLFWCWQWKRL
Trigger: AAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS CAA 90 bp TCACTCTTGCCATCCACATCTTGGGGGTGGGCTGGGAAGGCCAGGTaGTTTCTACAATTATACGGCATAGCTTGGGACCCATTCTCCCTA +
Preference number: 6 (lower is better)
Translates to: SLLPSTSWGWAGKAR*FLQLYGIAWDPFSL
Trigger: TAGGGAGAATGGGTCCCAAGCTATGCCGTATAATTGTAGAAACAACCTGGCCTTCCCAGCCCACCCCCAAGATGTGGATGGCAAGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp TGCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTaGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGCGACTT +
Preference number: 6 (lower is better)
Translates to: CSYVNRHHVSLDCLG*LSHLLFWCWQWKRL
Trigger: AAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342260.9
ENST00000427025.6
CDS CAA 90 bp ATTCTCCCCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTaGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: ILPSYVNRHHVSLDC*GLLSHLLFWCWQWK
Trigger: CTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGGGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS CAA 90 bp ACATTGATCACGCTGTGCCTGGGGTTCCCAAAGCCATCACTGCTATaGCACAGATTCCCAGATCCATGTCCAGAGTCAGTGTGCACAGAT +
Preference number: 6 (lower is better)
Translates to: TLITLCLGFPKPSLL*HRFPDPCPESVCTD
Trigger: ATCTGTGCACACTGACTCTGGACATGGATCTGGGAATCTGTGCAATAGCAGTGATGGCTTTGGGAACCCCAGGCACAGCGTGATCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp ACCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTGGGCTaGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAGCGACTT +
Preference number: 6 (lower is better)
Translates to: TSYVNRHHVSLDCLG*LSHLLFWCWQWKRL
Trigger: AAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426841.6
CDS CAA 90 bp AAGCGTACCAGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTaGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: KRTSYVNRHHVSLDC*GLLSHLLFWCWQWK
Trigger: CTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGTACGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426841.6
CDS CAA 90 bp GCTGCCCACAAACCGAGAGCTCTCCATCACTGCGAAACAGCCTCTTaGTCTGCCTGGACAAGGAGGAGAAATTTATCCAACTTACAGCAC +
Preference number: 6 (lower is better)
Translates to: AAHKPRALHHCETAS*SAWTRRRNLSNLQH
Trigger: GTGCTGTAAGTTGGATAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTTGTGGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS TCA 72 bp TGTCTGAACGACTGCCCTTTTTCAGCAGCAGAGCTTTaGAGTTGTCACTGCTGGTGCTGCTCTTTCGGATGC +
Preference number: 6 (lower is better)
Translates to: CLNDCPFSAAEL*SCHCWCCSFGC
Trigger: GCATCCGAAAGAGCAGCACCAGCAGTGACAACTTCAAAGCTCTGCTGCTGAAAAAGGGCAGTCGTTCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CAGTGTGGCATTTGGGATGATGCTGGTGGAGTAGGTTaGATGAGGAGAAACCACACACGCTGGGCTCATTAT +
Preference number: 6 (lower is better)
Translates to: QCGIWDDAGGVG*MRRNHTRWAHY
Trigger: ATAATGAGCCCAGCGTGTGTGGTTTCTCCTCATGCAACCTACTCCACCAGCATCATCCCAAATGCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CTGTATATCCAGTTTTCGTCATCCACTTCCACCTGCTaGCCACAAACCGAGAGCTCTCCATCACTGCGAAAC +
Preference number: 6 (lower is better)
Translates to: LYIQFSSSTSTC*PQTESSPSLRN
Trigger: GTTTCGCAGTGATGGAGAGCTCTCGGTTTGTGGGCAGCAGGTGGAAGTGGATGACGAAAACTGGATATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CCA 72 bp CTTCATCTTCATCTTGGTAATCATCACAGAATGGGCTaGCGTTGGCCGCAAAGGTGGGTCCCTGAGAGTAGT +
Preference number: 6 (lower is better)
Translates to: LHLHLGNHHRMG*RWPQRWVPESS
Trigger: ACTACTCTCAGGGACCCACCTTTGCGGCCAACGCCAGCCCATTCTGTGATGATTACCAAGATGAAGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000479393.2
ENST00000491526.6
ENST00000533765.1
CDS CCA 72 bp GGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGCAGTaGAAGCGACTTGGTCCAGTTCGTCTGAGTATTAAG +
Preference number: 6 (lower is better)
Translates to: GLLSHLLFWCWQ*KRLGPVRLSIK
Trigger: CTTAATACTCAGACGAACTGGACCAAGTCGCTTCCACTGCCAACACCAGAAGAGAAGATGCGACAGCAAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 72 bp GTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTTaGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGGC +
Preference number: 6 (lower is better)
Translates to: VMLIGTTSAWTV*ACCRIFSSGVG
Trigger: GCCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CCA 72 bp TCAGGGGTGTACACTGAGTGGCCATCAGCATCATCTTaGCCAGTGCCTGATGCAGTTATGTTAATAGGCACC +
Preference number: 6 (lower is better)
Translates to: SGVYTEWPSASS*PVPDAVMLIGT
Trigger: GGTGCCTATTAACATAACTGCATCAGGCACTGGCCAAGATGATGCTGATGGCCACTCAGTGTACACCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342260.9
ENST00000427025.6
CDS CCA 72 bp GGTCCTCAGAATACAGCGACCCAGCATCCTCTTTGTTaGACGTTTGGTCCAAACTGCAGCTGCTCATGTTAC +
Preference number: 6 (lower is better)
Translates to: GPQNTATQHPLC*TFGPNCSCSCY
Trigger: GTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGCTGTATTCTGAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 90 bp GTGGTCCTCAGAATACAGCGACCCAGCATCCTCTTTGTTGGACGTTaGGTCCAAACTGCAGCTGCTCATGTTACTTGTGGGAGTGGAATA +
Preference number: 6 (lower is better)
Translates to: VVLRIQRPSILFVGR*VQTAAAHVTCGSGI
Trigger: TATTCCACTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGCTGTATTCTGAGGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp CATCCTCTTTGTTGGACGTTTGGTCCAAACTGCAGCTaGTCATGTTACTTGTGGGAGTGGAATAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: HPLCWTFGPNCS*SCYLWEWNSQE
Trigger: CTCCTGGCTATTCCACTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp ACCCAGCATCCTCTTTGTTGGACGTTTGGTCCAAACTaGAGCTGCTCATGTTACTTGTGGGAGTGGAATAGC +
Preference number: 6 (lower is better)
Translates to: TQHPLCWTFGPN*SCSCYLWEWNS
Trigger: GCTATTCCACTCCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS GCA 72 bp GCAGCGTGTTCATTTCAGGAGTACTTGTCAGGACTTTaGAAAACACAAAGCCAAGGCACCCCGACTCTTTGG +
Preference number: 6 (lower is better)
Translates to: AACSFQEYLSGL*KTQSQGTPTLW
Trigger: CCAAAGAGTCGGGGTGCCTTGGCTTTGTGTTTTGCAAAGTCCTGACAAGTACTCCTGAAATGAACACGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS CCA 72 bp CCTGATGCAGTTATGTTAATAGGCACCACGTCAGCCTaGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PDAVMLIGTTSA*TVWACCRIFSS
Trigger: AGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGCATCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342260.9
ENST00000427025.6
CDS CCA 72 bp TTCTCCCCAGTTATGTTAATAGGCACCACGTCAGCCTaGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: FSPVMLIGTTSA*TVWACCRIFSS
Trigger: AGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343505.9
CDS CCA 72 bp AGCGTACCAGTTATGTTAATAGGCACCACGTCAGCCTaGACTGTTTGGGCTTGCTGTCGCATCTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SVPVMLIGTTSA*TVWACCRIFSS
Trigger: AGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACTGGTACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426841.6
CDS CAA 72 bp AGTTATGTTAATAGGCACCACGTCAGCCTGGACTGTTaGGGCTTGCTGTCGCATCTTCTCTTCTGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: SYVNRHHVSLDC*GLLSHLLFWCW
Trigger: CCAACACCAGAAGAGAAGATGCGACAGCAAGCCCAAACAGTCCAGGCTGACGTGGTGCCTATTAACATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
CDS CAA 72 bp AGAATACAGCGACCCAGCATCCTCTTTGTTGGACGTTaGGTCCAAACTGCAGCTGCTCATGTTACTTGTGGG +
Preference number: 6 (lower is better)
Translates to: RIQRPSILFVGR*VQTAAAHVTCG
Trigger: CCCACAAGTAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGCTGTATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CAA 72 bp TGGTCCTCAGAATACAGCGACCCAGCATCCTCTTTGTaGGACGTTTGGTCCAAACTGCAGCTGCTCATGTTA +
Preference number: 6 (lower is better)
Translates to: WSSEYSDPASSL*DVWSKLQLLML
Trigger: TAACATGAGCAGCTGCAGTTTGGACCAAACGTCCAACAAAGAGGATGCTGGGTCGCTGTATTCTGAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp GAGACTGAGGATCACCTTTCACAGCATGCCTGGAGATaGGGTGGTCTCTGGATTTTATCCTTGCATGTGATG +
Preference number: 6 (lower is better)
Translates to: ETEDHLSQHAWR*GGLWILSLHVM
Trigger: CATCACATGCAAGGATAAAATCCAGAGACCACCTCATCTCCAGGCATGCTGTGAAAGGTGATCCTCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp CAACTTACAGCACGTGAGAGAGAACCTGTATTCGGCTaGAGTCTGAAGGAACCTGAAGAGCCTTCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: QLTAREREPVFG*SLKEPEEPSFF
Trigger: GAAAAAGGAAGGCTCTTCAGGTTCCTTCAGACTCCAGCCGAATACAGGTTCTCTCTCACGTGCTGTAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CCA 72 bp GCTCTCCATCACTGCGAAACAGCCTCTTTGTCTGCCTaGACAAGGAGGAGAAATTTATCCAACTTACAGCAC +
Preference number: 6 (lower is better)
Translates to: ALHHCETASLSA*TRRRNLSNLQH
Trigger: GTGCTGTAAGTTGGATAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CAA 72 bp AGCAGCGTGTTCATTTCAGGAGTACTTGTCAGGACTTaGCAAAACACAAAGCCAAGGCACCCCGACTCTTTG +
Preference number: 6 (lower is better)
Translates to: SSVFISGVLVRT*QNTKPRHPDSL
Trigger: CAAAGAGTCGGGGTGCCTTGGCTTTGTGTTTTGCAAAGTCCTGACAAGTACTCCTGAAATGAACACGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427025.6
CDS CAA 72 bp AAACCGAGAGCTCTCCATCACTGCGAAACAGCCTCTTaGTCTGCCTGGACAAGGAGGAGAAATTTATCCAAC +
Preference number: 6 (lower is better)
Translates to: KPRALHHCETAS*SAWTRRRNLSN
Trigger: GTTGGATAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS CAA 90 bp GCGAGCTTGTCACAGAGGCAGGCTGGCTTTCACTCTCCATTTCATTaGTGCTATTTCGGGATTTCAGGAAAGCAGATGGCTTTAAGTGGT +
Preference number: 6 (lower is better)
Translates to: ASLSQRQAGFHSPFH*CYFGISGKQMALSG
Trigger: ACCACTTAAAGCCATCTGCTTTCCTGAAATCCCGAAATAGCACAAATGAAATGGAGAGTGAAAGCCAGCCTGCCTCTGTGACAAGCTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp GGACAAGGAGGAGAAATTTATCCAACTTACAGCACGTaGGAGAGAACCTGTATTCGGCTGGAGTCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: GQGGEIYPTYST*ERTCIRLESEG
Trigger: TCCTTCAGACTCCAGCCGAATACAGGTTCTCTCTCACGTGCTGTAAGTTGGATAAATTTCTCCTCCTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS GCA 72 bp GAGAGCTCTCCATCACTGCGAAACAGCCTCTTTGTCTaGCTGGACAAGGAGGAGAAATTTATCCAACTTACA +
Preference number: 6 (lower is better)
Translates to: ESSPSLRNSLFV*LDKEEKFIQLT
Trigger: TGTAAGTTGGATAAATTTCTCCTCCTTGTCCAGGCAGACAAAGAGGCTGTTTCGCAGTGATGGAGAGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427025.6
ENST00000468095.2
ENST00000534376.1
CDS TCA 72 bp CCAGTTCGTCTGAGTATTAAGGTCGGAGAAGTCACTTaGGGCTGGTGTTTTAGGTCTCCTGATGGAAATAAA +
Preference number: 6 (lower is better)
Translates to: PVRLSIKVGEVT*GWCFRSPDGNK
Trigger: TTTATTTCCATCAGGAGACCTAAAACACCAGCCTCAAGTGACTTCTCCGACCTTAATACTCAGACGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342260.9
ENST00000343505.9
ENST00000426841.6
ENST00000427025.6
ENST00000491526.6
CDS CCA 72 bp CTCATTATATTTTCACTCTCGAAGTGTCTCAACTCCTaGGATTTGGGTCTCAAAAGTGTTCCAGTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: LIIFSLSKCLNS*DLGLKSVPVPE
Trigger: CTCAGGGACTGGAACACTTTTGAGACCCAAATCCCAGGAGTTGAGACACTTCGAGAGTGAAAATATAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp AAGGCCAGGTTGTTTCTACAATTATACGGCATAGCTTaGGACCCATTCTCCCTATTTGCTGGAGCATTTAGA +
Preference number: 6 (lower is better)
Translates to: KARLFLQLYGIA*DPFSLFAGAFR
Trigger: TCTAAATGCTCCAGCAAATAGGGAGAATGGGTCCCAAGCTATGCCGTATAATTGTAGAAACAACCTGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS CCA 72 bp AAGAGATGTTTCTTGATAGGGATTTATCCTGGTAATTaGACCGGTCCCCTTGGTTTTTCTGAGCTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: KRCFLIGIYPGN*TGPLGFSELFQ
Trigger: TTGGAAGAGCTCAGAAAAACCAAGGGGACCGGTCCAATTACCAGGATAAATCCCTATCAAGAAACATCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343505.9
ENST00000427025.6
CDS TCA 72 bp AAACAAAAAGCTGTAGTCATTCTCCCAAGTACATTCTaGACCTGTCTGGCTAGCAAAGCGTACCAGTTATGT +
Preference number: 6 (lower is better)
Translates to: KQKAVVILPSTF*TCLASKAYQLC
Trigger: ACATAACTGGTACGCTTTGCTAGCCAGACAGGTTCAGAATGTACTTGGGAGAATGACTACAGCTTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426841.6