RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NHEJ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187736

Ensembl transcript IDs: ENST00000356853.10, ENST00000409720.5, ENST00000418099.5, ENST00000426304.5, ENST00000450447.1, ENST00000457600.2, ENST00000481764.1, ENST00000483627.1, ENST00000491159.5, ENST00000494211.5

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGAGTCAATGGCTGTGTGCTCCCCACACCCTGGAGCTCTTCCAGTaGTTCTTCCGGGTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGA +
Preference number: 1 (lower is better)
Translates to: VSQWLCAPHTLELFQ*FFRVPLVGWPRFLR
Trigger: TCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCGGAAGAAGCACTGGAAGAGCTCCAGGGTGTGGGGAGCACACAGCCATTGACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp ACCCTGGAGCTCTTCCAGTGCTTCTTCCGGGTTCCCCTGGTAGGCTaGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGCTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: TLELFQCFFRVPLVG*PRFLRTHKSWVLSG
Trigger: CCCACTCAGCACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCGGAAGAAGCACTGGAAGAGCTCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp CTGTCTTTACCATGCATGATTCCCAACAGCACTGCTCTTGATCCCTaGGTGGAGACCCACACCCTGTGGGGCTTCCCTACCAGCTCCAAC +
Preference number: 1 (lower is better)
Translates to: LSLPCMIPNSTALDP*VETHTLWGFPTSSN
Trigger: GTTGGAGCTGGTAGGGAAGCCCCACAGGGTGTGGGTCTCCACTCAGGGATCAAGAGCAGTGCTGTTGGGAATCATGCATGGTAAAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp GTAAGGGCTGTCTTTACCATGCATGATTCCCAACAGCACTGCTCTTaGTCCCTGAGTGGAGACCCACACCCTGTGGGGCTTCCCTACCAG +
Preference number: 1 (lower is better)
Translates to: VRAVFTMHDSQQHCS*SLSGDPHPVGLPYQ
Trigger: CTGGTAGGGAAGCCCCACAGGGTGTGGGTCTCCACTCAGGGATCAAGAGCAGTGCTGTTGGGAATCATGCATGGTAAAGACAGCCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 90 bp GTAGGGCTGAGTATCAAGAGATGTGAGCATCTCTCCTTCCCCCAGTaGTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGG +
Preference number: 1 (lower is better)
Translates to: VGLSIKRCEHLSFPQ*SLWVRYTRPVEGFW
Trigger: CCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCTCTTGATACTCAGCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 90 bp GGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCTCACCTAGGGTaGTCTGTGATGACTCAGGGACTGGCCTGGCTCCTTTGGGTCATT +
Preference number: 1 (lower is better)
Translates to: GWSNSREHFRVSHLG*SVMTQGLAWLLWVI
Trigger: AATGACCCAAAGGAGCCAGGCCAGTCCCTGAGTCATCACAGAGCACCCTAGGTGAGAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp CGCTGGATAAAAACGAGCAGCAGTAGGGCTGAGTATCAAGAGATGTaGGCATCTCTCCTTCCCCCAGTGCTCACTGTGGGTGCGCTACAC +
Preference number: 1 (lower is better)
Translates to: RWIKTSSSRAEYQEM*ASLLPPVLTVGALH
Trigger: GTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCTCTTGATACTCAGCCCTACTGCTGCTCGTTTTTATCCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 90 bp TCAAGAGATGTGAGCATCTCTCCTTCCCCCAGTGCTCACTGTGGGTaGGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGCTA +
Preference number: 1 (lower is better)
Translates to: SRDVSISPSPSAHCG*ATPGLWKDFGLNRL
Trigger: TAGCCTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCTCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp TCTCCTTCCCCCAGTGCTCACTGTGGGTGCGCTACACCAGGCCTGTaGAAGGATTTTGGTCTCAACAGGCTAGACTCTTTCCAGTTCAGA +
Preference number: 1 (lower is better)
Translates to: SPSPSAHCGCATPGL*KDFGLNRLDSFQFR
Trigger: TCTGAACTGGAAAGAGTCTAGCCTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp CCAGCAGGACAAGTAATCCTAGCACAATCTTCCCAGGTGAGTCAATaGCTGTGTGCTCCCCACACCCTGGAGCTCTTCCAGTGCTTCTTC +
Preference number: 1 (lower is better)
Translates to: PAGQVILAQSSQVSQ*LCAPHTLELFQCFF
Trigger: GAAGAAGCACTGGAAGAGCTCCAGGGTGTGGGGAGCACACAGCCATTGACTCACCTGGGAAGATTGTGCTAGGATTACTTGTCCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp AGTATCAAGAGATGTGAGCATCTCTCCTTCCCCCAGTGCTCACTGTaGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAG +
Preference number: 1 (lower is better)
Translates to: SIKRCEHLSFPQCSL*VRYTRPVEGFWSQQ
Trigger: CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCTCTTGATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp GTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGAACCCATAAGAGTTaGGTGCTGAGTGGGTGGAAGGATAGCAAAATCTGTTGGGCTCCA +
Preference number: 1 (lower is better)
Translates to: VPLVGWPRFLRTHKS*VLSGWKDSKICWAP
Trigger: TGGAGCCCAACAGATTTTGCTATCCTTCCACCCACTCAGCACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp GAGAGGAAGAGTGTGGCACTGCATGCTCCTTTAACTACTGGCCCTTaGCCCAGCAGGACAAGTAATCCTAGCACAATCTTCCCAGGTGAG +
Preference number: 1 (lower is better)
Translates to: ERKSVALHAPLTTGP*PSRTSNPSTIFPGE
Trigger: CTCACCTGGGAAGATTGTGCTAGGATTACTTGTCCTGCTGGGCCAAGGGCCAGTAGTTAAAGGAGCATGCAGTGCCACACTCTTCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp CCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTT +
Preference number: 1 (lower is better)
Translates to: PKERRARDSQRLAST*TGKANSLWACQHQL
Trigger: AAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CCA 90 bp CAGTGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTaGTCTCAACAGGCTAGACTCTTTCCAGTTCAGAGCATAGAAGCA +
Preference number: 1 (lower is better)
Translates to: QCSLWVRYTRPVEGF*SQQARLFPVQSIEA
Trigger: TGCTTCTATGCTCTGAACTGGAAAGAGTCTAGCCTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 90 bp TCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTGTaGTGTTACAGTACAGGGAATGCCCAGGGTGAAGAACCGGTATTT +
Preference number: 1 (lower is better)
Translates to: SQASGPAVMKNVLSL*CYSTGNAQGEEPVF
Trigger: AAATACCGGTTCTTCACCCTGGGCATTCCCTGTACTGTAACAGCACAGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp TCAGGGACTGGCCTGGCTCCTTTGGGTCATTCATCAAAGCCATTTTaGAGCAAGGACTGCTTAGTAGGAGCTGAGCTTTCCACCAGAAAG +
Preference number: 1 (lower is better)
Translates to: SGTGLAPLGHSSKPF*SKDCLVGAELSTRK
Trigger: CTTTCTGGTGGAAAGCTCAGCTCCTACTAAGCAGTCCTTGCTTCAAAATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp AGGACCAGACTGATGGCTAGACTTCATCCAGAGACAACAATGGGGTaGGACCCAGTGAAGGAAGTGAATTGGGTTATGAGTTCCACAGCA +
Preference number: 1 (lower is better)
Translates to: RTRLMARLHPETTMG*DPVKEVNWVMSSTA
Trigger: TGCTGTGGAACTCATAACCCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCTAGCCATCAGTCTGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CCA 90 bp CACTTCGATGACAGTCACTACCACACAGCACACTCTAGGGTCCTGTaGTCTGGGGGTAAAGAAAAGTTATCAGCAGTGACTGGGAATGAG +
Preference number: 1 (lower is better)
Translates to: HFDDSHYHTAHSRVL*SGGKEKLSAVTGNE
Trigger: CTCATTCCCAGTCACTGCTGATAACTTTTCTTTACCCCCAGACCACAGGACCCTAGAGTGTGCTGTGTGGTAGTGACTGTCATCGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp TCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACTaGTGGCTAGACTTCATCCAGAGACAACAATGGGGTGGGACCCAG +
Preference number: 1 (lower is better)
Translates to: SGNCRKVYEESEGPD*WLDFIQRQQWGGTQ
Trigger: CTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCTAGCCATCAGTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR TCA 90 bp CATCAGGCTTTTTCTGTCTTGAGTAAGGGCTGTCTTTACCATGCATaGTTCCCAACAGCACTGCTCTTGATCCCTGAGTGGAGACCCACA +
Preference number: 1 (lower is better)
Translates to: HQAFSVLSKGCLYHA*FPTALLLIPEWRPT
Trigger: TGTGGGTCTCCACTCAGGGATCAAGAGCAGTGCTGTTGGGAATCATGCATGGTAAAGACAGCCCTTACTCAAGACAGAAAAAGCCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp GTGCTTATTCACTATCACCACCAACAGGGGCATTATGCTCCTTGCTaGATGGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCC +
Preference number: 1 (lower is better)
Translates to: VLIHYHHQQGHYAPC*MATNCLCSISPQSA
Trigger: GGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGTGATAGTGAATAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 90 bp ACTGCACTGAGTGCTTATTCACTATCACCACCAACAGGGGCATTATaGTCCTTGCTGAATGGCCACAAACTGCCTGTGTTCAATAAGCCC +
Preference number: 1 (lower is better)
Translates to: TALSAYSLSPPTGAL*SLLNGHKLPVFNKP
Trigger: GGGCTTATTGAACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGTGATAGTGAATAAGCACTCAGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 90 bp TGGCTAGAGACGCTAGGGAAAGGTAGACAAGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTGCCCTATATACCTAAAGTCCATGGT +
Preference number: 1 (lower is better)
Translates to: WLETLGKGRQGFLSV*CFLADLPYIPKVHG
Trigger: ACCATGGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCCTTGTCTACCTTTCCCTAGCGTCTCTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR GCA 90 bp CTAGAGACGCTAGGGAAAGGTAGACAAGGCTTCCTGAGTGTGTGGTaGTTTCTTGCTGACTTGCCCTATATACCTAAAGTCCATGGTAGA +
Preference number: 1 (lower is better)
Translates to: LETLGKGRQGFLSVW*FLADLPYIPKVHGR
Trigger: TCTACCATGGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCCTTGTCTACCTTTCCCTAGCGTCTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CCA 90 bp TGGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGCTGAGTGGGTaGAAGGATAGCAAAATCTGTTGGGCTCCAAATAGAGAAACTGAG +
Preference number: 1 (lower is better)
Translates to: WPRFLRTHKSWVLSG*KDSKICWAPNRETE
Trigger: CTCAGTTTCTCTATTTGGAGCCCAACAGATTTTGCTATCCTTCCACCCACTCAGCACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp TTCTTGCTGACTTGCCCTATATACCTAAAGTCCATGGTAGAAACCTaGACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTC +
Preference number: 1 (lower is better)
Translates to: FLLTCPIYLKSMVET*TYRTSTKREESTGF
Trigger: GAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGGCAAGTCAGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR TCA 90 bp ACTTGGGTGCTACCTAATGACTTCCTATGTGCTAGGATAGAGAACTaGGAGCCCAGAGCTGAGAGGATACATAAAAGGCCACCACAAAAA +
Preference number: 1 (lower is better)
Translates to: TWVLPNDFLCARIEN*EPRAERIHKRPPQK
Trigger: TTTTTGTGGTGGCCTTTTATGTATCCTCTCAGCTCTGGGCTCTCAGTTCTCTATCCTAGCACATAGGAAGTCATTAGGTAGCACCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 90 bp GTATTGCTGTTATCTATGAAACAAAATCTAAATTATTACCAGCTCTaGCTTCCACAACTAGTGCCTCCCCATTCCTCTCACGTGACAGGA +
Preference number: 1 (lower is better)
Translates to: VLLLSMKQNLNYYQL*LPQLVPPHSSHVTG
Trigger: TCCTGTCACGTGAGAGGAATGGGGAGGCACTAGTTGTGGAAGGCAGAGCTGGTAATAATTTAGATTTTGTTTCATAGATAACAGCAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp ATACATTTATGGATATTAGTAACAGAGACGAGGAACCAAGGTTCTTaGGCTCTGAGTTTGGTGGCTTCCTTGCAGTATGTCACTTATTCC +
Preference number: 1 (lower is better)
Translates to: IHLWILVTETRNQGS*ALSLVASLQYVTYS
Trigger: GGAATAAGTGACATACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCTGTTACTAATATCCATAAATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 90 bp CTCAGCTGTCTGGGCTTAAATTCTGGCTGTCACTTATTAGCTGTATaGCCTTTGATAAGTCACTTACTCACTTCAGGATCCAATTTCTTA +
Preference number: 1 (lower is better)
Translates to: LSCLGLNSGCHLLAV*PLISHLLTSGSNFL
Trigger: TAAGAAATTGGATCCTGAAGTGAGTAAGTGACTTATCAAAGGTCATACAGCTAATAAGTGACAGCCAGAATTTAAGCCCAGACAGCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGCCAGGGGGCAGGGCTaGAATACAGCCTGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQARGQG*NTAWLG
Trigger: GCCTAGCCAGGCTGTATTCCAGCCCTGCCCCCTGGC...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCCACAGCCTCCGGAGTAGGAGTATCTGGGGCTaGCTGGCTAGAGACGCTAGG +
Preference number: 2 (lower is better)
Translates to: GHKLPVFNKPTICHSLRSRSIWG*LARDAR
Trigger: CCTAGCGTCTCTAGCCAGCCAGCCCCAGATACTCCT...ACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 90 bp TTCCAGTGCTTCTTCCGGGTTCCCCTGGTAGGCTGGCCCAGATTCTaGAGAACCCATAAGAGTTGGGTGCTGAGTGGGTGGAAGGATAGC +
Preference number: 2 (lower is better)
Translates to: FQCFFRVPLVGWPRF*RTHKSWVLSGWKDS
Trigger: GCTATCCTTCCACCCACTCAGCACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCGGAAGAAGCACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp ACCACCAACAGGGGCATTATGCTCCTTGCTGAATGGCCACAAACTGCCTGTGTTCAAGAGCTCCTTCCTTaGAGAGCCCCTGGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: TTNRGIMLLAEWPQTACVQELLP*RAPGEQ
Trigger: CTGCTCCCCAGGGGCTCTTCAAGGAAGGAGCTCTTG...AACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR GCA 90 bp CGGGTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGGTCCTGCTCCTGGTTTaGTGGCTTGCTCGTGTAAAC +
Preference number: 2 (lower is better)
Translates to: RVPLVGWPRFLRTHKSWVVLLLV*WLARVN
Trigger: GTTTACACGAGCAAGCCAGCAAACCAGGAGCAGGAC...CACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR GCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTTACACAAGGGGCCCCTaGTTATCTCCCAACAAACGT +
Preference number: 2 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAYTRGP*LSPNKR
Trigger: ACGTTTGTTGGGAGATAAGCAGGGGCCCCTTGTGTA...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTGCAGAACAGACAAAGTaGGCTTACCATATCATGAGG +
Preference number: 2 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAAEQTK*AYHIMR
Trigger: CCTCATGATATGGTAAGCTCACTTTGTCTGTTCTGC...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTTGCAAAAGAGAGAAGTaGGTCTCTGAGGAGTATCTG +
Preference number: 2 (lower is better)
Translates to: ELPWTRAPCSSFQGINAACKREK*VSEEYL
Trigger: CAGATACTCCTCAGAGACCCACTTCTCTCTTTTGCA...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp TGGAAATCCTCCTTGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAAGAGAATCCCAAGTCCTGCTCCTaGTTTGCTGGCTTGCTCGTG +
Preference number: 2 (lower is better)
Translates to: WKSSLIWETGCLVTREENPKSCS*FAGLLV
Trigger: CACGAGCAAGCCAGCAAACCAGGAGCAGGACTTGGG...ATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTaGAACAGGGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACT +
Preference number: 2 (lower is better)
Translates to: TKREESTGFSETGFH*NREGQFPVGLSTST
Trigger: AGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: TKREESTGFSETGFHLNRRLAST*TGKANS
Trigger: GGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACAGAGAAGTGGGTCTCTaGGGAGTATCTGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINREVGL*GVSGAG
Trigger: GCCAGCCCCAGATACTCCTCAGAGACCCACTTCTCT...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp CGGGTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGAGTTTACGAAGAATCTaGAGGACCAGACTGATGGCT +
Preference number: 2 (lower is better)
Translates to: RVPLVGWPRFLRTHKSWVSLRRI*RTRLMA
Trigger: AGCCATCAGTCTGGTCCTTCAGATTCTTCGTAAACT...CACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp TGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGGACCTCTTGTGTGGTaGCTGCCATATACAGATCCT +
Preference number: 2 (lower is better)
Translates to: WACQHQLQFSRPYRRPLTGPLVW*LPYTDP
Trigger: AGGATCTGTATATGGCAGTCACCACACAAGAGGTCC...AGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR GCA 90 bp TGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTTTCCTGAGTGTGTGGTaGTTTCTTGCTGACTTGCCC +
Preference number: 2 (lower is better)
Translates to: WACQHQLQFSRPYRRPLTFLSVW*FLADLP
Trigger: GGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAA...AGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAACTCTTGTGTGGTGACTaGCATATACAGATCCTGCAG +
Preference number: 2 (lower is better)
Translates to: EESTGFSETGFHLNREGQLLCGD*HIQILQ
Trigger: CTGCAGGATCTGTATATGGCAGTCACCACACAAGAG...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR TCA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGCAAAAGCAGGGACTGTaGGTGCTTTTTATTCCATGC +
Preference number: 2 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQQKQGL*VLFIPC
Trigger: GCATGGAATAAAAAGCACTCACAGTCCCTGCTTTTG...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCATCTCTGCAGAGGGCCTaGAGTACCCGTGGACTCTTT +
Preference number: 2 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSSLQRA*STRGLF
Trigger: AAAGAGTCCACGGGTACTTCAGGCCCTCTGCAGAGA...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR TCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGCTTCCTCTTGACCTTTaGCAGCTGAGGTCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWLPLDL*QLRSLQ
Trigger: CTGCAGAGACCTCAGCTGTCAAAGGTCAAGAGGAAG...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR TCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAATCCATCCTCAGCAGCTaGGGCCACAACAGATTAACT +
Preference number: 2 (lower is better)
Translates to: LHQKRGEHGILRDWLPLESILSS*GHNRLT
Trigger: AGTTAATCTGTTGTGGCCTCAGCTGCTGAGGATGGA...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR GCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAATTCCTGAGTGTGTGGTaGTTTCTTGCTGACTTGCCC +
Preference number: 2 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEFLSVW*FLADLP
Trigger: GGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAA...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTTTTCAAGGTGAAGCTTaGAAGCTGTTCTCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPFQGEA*KLFSKS
Trigger: GGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAA...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
3UTR-3UTR CCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGAGGAGTATCTGGGGCTaGCTGGCTAGAGACGCTAGG +
Preference number: 2 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGERSIWG*LARDAR
Trigger: CCTAGCGTCTCTAGCCAGCCAGCCCCAGATACTCCT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGAAGCAGGGATTTCCCTaGAGTTGCCTTAGGATGAAT +
Preference number: 2 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQKQGFP*SCLRMN
Trigger: ATTCATCCTAAGGCAACTCCAGGGAAATCCCTGCTT...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTAAGCTTCTTTCAAGGTaGAGCTTGGAAGCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: GEHGILRDWLPLEQGRPIKLLSR*SLEAVL
Trigger: GAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTT...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
3UTR-3UTR TCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCGTAGACAAGGCTTCCTaGGTGTGTGGTGCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLVDKAS*VCGAFL
Trigger: CAAGAAAGCACCACACACTCAGGAAGCCTTGTCTAC...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGGTAGACAAGGCTTCCTaGGTGTGTGGTGCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWVDKAS*VCGAFL
Trigger: CAAGAAAGCACCACACACTCAGGAAGCCTTGTCTAC...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCCATAGAGCAATGAGCTaGCCTGGACAAGAGCACCCT +
Preference number: 2 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFHRAMS*PGQEHP
Trigger: AGGGTGCTCTTGTCCAGGGCAGCTCATTGCTCTATG...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCGTATCTGGGGCTGGCTaGCTAGAGACGCTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KQQSPICLVPTIKRVLEIVSGAG*LETLGK
Trigger: TTTCCCTAGCGTCTCTAGCCAGCCAGCCCCAGATAC...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCTCTCTGAGGAGTATCTaGGGCTGGCTGGCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: KQQSPICLVPTIKRVLEISLRSI*GWLARD
Trigger: GTCTCTAGCCAGCCAGCCCCAGATACTCCTCAGAGA...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCATCTCTGAGGAGTATCTaGGGCTGGCTGGCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSLRSI*GWLARD
Trigger: GTCTCTAGCCAGCCAGCCCCAGATACTCCTCAGAGA...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp TGTCACCCATTTCTGACTGGCCGTCAATCCTATCAGGGGTCCATAAAGCTAGGAACTGGGAATGAGCCTTaGTGGAGATCTCAGACTCTG +
Preference number: 2 (lower is better)
Translates to: CHPFLTGRQSYQGSIKLGTGNEP*WRSQTL
Trigger: CAGAGTCTGAGATCTCCACCAAGGCTCATTCCCAGT...TCCTAGCTTTATGGACCCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 90 bp ATGAGGATCTCCAGCGCCTTGATGCTTCTGTCCCACTTGGACCTCTaGTGTGGTGACTGCCATATACAGATCCTGCAGATTCATGACAAA +
Preference number: 2 (lower is better)
Translates to: MRISSALMLLSHLDL*CGDCHIQILQIHDK
Trigger: TTTGTCATGAATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR TCA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTTACAGGAGGCCTCTaGCTGTATCACTATTTTAGA +
Preference number: 2 (lower is better)
Translates to: GEHGILRDWLPLEQGRPILTGGL*LYHYFR
Trigger: TCTAAAATAGTGATACAGTCAGAGGCCTCCTGTAAG...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp TCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCGTAGACAAGGCTTCCTaGGTGTGTGGTGCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: SKFGKGKQQSPICLVPTIVDKAS*VCGAFL
Trigger: CAAGAAAGCACCACACACTCAGGAAGCCTTGTCTAC...GATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGCAAAAGCAGGGACTGTaGGTGCTTTTTATTCCATGC +
Preference number: 2 (lower is better)
Translates to: TKREESTGFSETGFHLNRQKQGL*VLFIPC
Trigger: GCATGGAATAAAAAGCACTCACAGTCCCTGCTTTTG...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp TGTCACCCATTTCTGACTGGCCGTCAATCCTATCAGGGGTCCATAAAGCTAGGAAGGTGGAGTTTGCAGTaGGCCAAAATTGTGCGATTG +
Preference number: 2 (lower is better)
Translates to: CHPFLTGRQSYQGSIKLGRWSLQ*AKIVRL
Trigger: CAATCGCACAATTTTGGCTCACTGCAAACTCCACCT...TCCTAGCTTTATGGACCCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp ACCACCAACAGGGGCATTATGCTCCTTGCTGAATGGCCACAAACTGCCTGTGTTAGGCTTTTTCTGTCTTaGGTAAGGGCTGTCTTTACC +
Preference number: 2 (lower is better)
Translates to: TTNRGIMLLAEWPQTACVRLFLS*VRAVFT
Trigger: GGTAAAGACAGCCCTTACTCAAGACAGAAAAAGCCT...AACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCAGGGAAGCACTGTTTaGGGTATGAGGATCTCCAGC +
Preference number: 2 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEQGSTV*GMRISS
Trigger: GCTGGAGATCCTCATACCTCAAACAGTGCTTCCCTG...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR CCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINGFLSV*CFLADL
Trigger: CAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCC...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCGGCTGGAATACAGCCTaGCTAGGCCAATTTGTCAAA +
Preference number: 2 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLGWNTA*LGQFVK
Trigger: TTTGACAAATTGGCCTAGCCAGGCTGTATTCCAGCC...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp TTCTGTCTTCAATCGATCTCGAATCAGCGTAGCCCCACTCTCCTGGTAGTCTTGGGACGAATCAAATGTTaGGAGACCAGGGAAGGACTA +
Preference number: 2 (lower is better)
Translates to: FCLQSISNQRSPTLLVVLGRIKC*ETREGL
Trigger: TAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCC...CAAGACTACCAGGAGAGTGGGGCTACGCTGATTCGAGATCGATTGAAGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450447.1
3UTR CAA 90 bp TCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATaGGGTTATGAGTTCCACAGCATAAGTAATCCCAAAAGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: SSRDNNGVGPSEGSE*GYEFHSISNPKSRD
Trigger: GTCCCTGCTTTTGGGATTACTTATGCTGTGGAACTCATAACCCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CAA 90 bp CTGAGTGCTTATTCACTATCACCACCAACAGGGGCATTATGCTCCTaGCTGAATGGCCACAAACTGCCTGTGTTCAATAAGCCCACAATC +
Preference number: 2 (lower is better)
Translates to: LSAYSLSPPTGALCS*LNGHKLPVFNKPTI
Trigger: GATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGTGATAGTGAATAAGCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 90 bp TCTCCTGGTAGTCTTGGATCTCTAGGTCTTTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGCACTGTAATGCCAGACTCATGCCCA +
Preference number: 2 (lower is better)
Translates to: SPGSLGSLGLSYEVT*LAPSLGTVMPDSCP
Trigger: TGGGCATGAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGAAAGACCTAGAGATCCAAGACTACCAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
3UTR-3UTR TCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCGAGCAGACATCCTATTaGAAAGAGGCAAGGTCATGG +
Preference number: 2 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFEQTSY*KEARSW
Trigger: CCATGACCTTGCCTCTTTTCAATAGGATGTCTGCTC...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR TCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGGGATCTCCAGCGCCTTaGTGCTTCTGTCCCACTTGG +
Preference number: 2 (lower is better)
Translates to: FPNGDLALATAEKFTKNLGSPAP*CFCPTW
Trigger: CCAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCC...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR CCA 90 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGAAGGCCAATTCCCTGTaGGCCTGTCAACATCAACTT +
Preference number: 2 (lower is better)
Translates to: LAKESSNHLSVLCPPSREKANSL*ACQHQL
Trigger: AAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTT...CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACTCTGAAGGACCAGACTaGTGGCTAGACTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDSEGPD*WLDFIQ
Trigger: CTGGATGAAGTCTAGCCATCAGTCTGGTCCTTCAGA...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACAGTTTACGAAGAATCTaGAGGACCAGACTGATGGCT +
Preference number: 2 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINSLRRI*RTRLMA
Trigger: AGCCATCAGTCTGGTCCTTCAGATTCTTCGTAAACT...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGGCTTTCTTGCTGACTTaGCCTATATACCTAAAGTCC +
Preference number: 2 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWAFLLT*PIYLKS
Trigger: GGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGC...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp ACTCAGGGACTGGCCTGGCTCCTTTGGGTCATTCATCAAAGCCATTTTGAAGCAAATTATTACCAGCTCTaGCTTCCACAACTAGTGCCT +
Preference number: 2 (lower is better)
Translates to: TQGLAWLLWVIHQSHFEANYYQL*LPQLVP
Trigger: AGGCACTAGTTGTGGAAGGCAGAGCTGGTAATAATT...TGCTTCAAAATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR GCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACGCCATATACAGATCCTaGAGATTCATGACAAAGGGC +
Preference number: 2 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINAIYRS*RFMTKG
Trigger: GCCCTTTGTCATGAATCTGCAGGATCTGTATATGGC...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR CCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCTTTCAAGGTGAAGCTTaGAAGCTGTTCTCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFFQGEA*KLFSKS
Trigger: GGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAA...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAGGCCAATTCCCTGTaGGCCTGTCAACATCAACTT +
Preference number: 2 (lower is better)
Translates to: KQQSPICLVPTIKRVLEIKANSL*ACQHQL
Trigger: AAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTT...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATAGTATCTGGGGCTGGCTaGCTAGAGACGCTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KQFKGMALACRKCIGNEIVSGAG*LETLGK
Trigger: TTTCCCTAGCGTCTCTAGCCAGCCAGCCCCAGATAC...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCCCTAAGAGGTATGCATaGTTCTGGATGGGAATCTCA +
Preference number: 2 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFPKRYA*FWMGIS
Trigger: TGAGATTCCCATCCAGAACCATGCATACCTCTTAGG...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 90 bp AAAGGTAGACAAGGCTTCCTGAGTGTGTGGTGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAG +
Preference number: 2 (lower is better)
Translates to: KGRQGFLSVWCFLAD*PYIPKVHGRNLNLQ
Trigger: CTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCCTTGTCTACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CAA 90 bp AGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTaGAGATCAAAGTTTCCAAATGGAGACTTAGCTCTGGCAACTGCA +
Preference number: 2 (lower is better)
Translates to: SSNHLSVLCPPSREF*RSKFPNGDLALATA
Trigger: TGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESRLAST*TGKANS
Trigger: GGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCT...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCAGCTTTCTTGCTGACTTaGCCTATATACCTAAAGTCC +
Preference number: 2 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSAFLLT*PIYLKS
Trigger: GGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGC...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTAGCAGGGACTGTGAGTaGTTTTTATTCCATGCAAAA +
Preference number: 2 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESSRDCE*FLFHAK
Trigger: TTTTGCATGGAATAAAAAGCACTCACAGTCCCTGCT...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR GCA 90 bp TCAAATTATATACTTATTGACTGCACTGAGTGCTTATTCACTATCACCACCAACAGTGCTCACTGTGGGTaGGCTACACCAGGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: SNYILIDCTECLFTITTNSAHCG*ATPGLW
Trigger: CCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACT...GTTGGTGGTGATAGTGAATAAGCACTCAGTGCAGTCAATAAGTATATAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTTTTACAGTGGGAGACTaGAAAGAAGAACCTAATGTC +
Preference number: 2 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESFTVGD*KEEPNV
Trigger: GACATTAGGTTCTTCTTTCCAGTCTCCCACTGTAAA...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATACCATGTTGGCCAGGCTaGTCTCAAATTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: KQFKGMALACRKCIGNEIPCWPG*SQIPDL
Trigger: GAGGTCAGGAATTTGAGACCAGCCTGGCCAACATGG...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAGGCCTGAAGTACCCGTaGACTCTTTCTCAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEGLKYP*TLSQVL
Trigger: CAGCACCTGAGAAAGAGTCCACGGGTACTTCAGGCC...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR TCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACAAGCTTCTTTCAAGGTaGAGCTTGGAAGCTGTTCTC +
Preference number: 2 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDKLLSR*SLEAVL
Trigger: GAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTT...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
3UTR-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACTTACAGGAGGCCTCTaGCTGTATCACTATTTTAGA +
Preference number: 2 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPLTGGL*LYHYFR
Trigger: TCTAAAATAGTGATACAGTCAGAGGCCTCCTGTAAG...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCCTTACAGGAGGCCTCTaGCTGTATCACTATTTTAGA +
Preference number: 2 (lower is better)
Translates to: KQQSPICLVPTIKRVLEILTGGL*LYHYFR
Trigger: TCTAAAATAGTGATACAGTCAGAGGCCTCCTGTAAG...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGCTTAGCTCTGGCAACTaGAGAAAAGTTTACGAAGAA +
Preference number: 2 (lower is better)
Translates to: LAKESSNHLSVLCPPSRELSSGN*RKVYEE
Trigger: TTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAG...CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACCTTAGCTCTGGCAACTaGAGAAAAGTTTACGAAGAA +
Preference number: 2 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINLSSGN*RKVYEE
Trigger: TTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAG...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR GCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCAATGTCTTGAGTCTGTaGTGTTACAGTACAGGGAAT +
Preference number: 2 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFNVLSL*CYSTGN
Trigger: ATTCCCTGTACTGTAACAGCACAGACTCAAGACATT...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATAGGGATTCTCAGAGACTaGCTTCCACTTGAACAGGGA +
Preference number: 2 (lower is better)
Translates to: KQFKGMALACRKCIGNEIGILRD*LPLEQG
Trigger: TCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCC...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESGFLSV*CFLADL
Trigger: CAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCC...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp TCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAATGCATCCAAGTTTaGCAAAGGAAAGCAGCAATC +
Preference number: 2 (lower is better)
Translates to: SKFGKGKQQSPICLVPTIKCIQV*QRKAAI
Trigger: GATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTT...GATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTG +
Preference number: 2 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEGFLSV*CFLADL
Trigger: CAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCC...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACGTGAAGGAAGTGAATTaGGTTATGAGTTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDVKEVN*VMSSTA
Trigger: TGCTGTGGAACTCATAACCCAATTCACTTCCTTCAC...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACATCAAGAGAGTTCTTaGGATCAAAGTTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPHQESS*DQSFQM
Trigger: CATTTGGAAACTTTGATCTCAAGAACTCTCTTGATG...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR TCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAACCACAACAGATTAACTaGAGAGACCCCTTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEPQQIN*RDPLAS
Trigger: AGAAGCCAAGGGGTCTCTTCAGTTAATCTGTTGTGG...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR GCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGAGCAGGGACTGTGAGTaGTTTTTATTCCATGCAAAA +
Preference number: 2 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKSRDCE*FLFHAK
Trigger: TTTTGCATGGAATAAAAAGCACTCACAGTCCCTGCT...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CAA 90 bp CATACATTTATGGATATTAGTAACAGAGACGAGGAACCAAGGTTCTaGAGCTCTGAGTTTGGTGGCTTCCTTGCAGTATGTCACTTATTC +
Preference number: 2 (lower is better)
Translates to: HTFMDISNRDEEPRF*SSEFGGFLAVCHLF
Trigger: GAATAAGTGACATACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCTGTTACTAATATCCATAAATGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR GCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAGCTTTCTTGCTGACTTaGCCTATATACCTAAAGTCC +
Preference number: 2 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEAFLLT*PIYLKS
Trigger: GGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGC...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATATCTGGGCTTAAATTCTaGCTGTCACTTATTAGCTGT +
Preference number: 2 (lower is better)
Translates to: KQFKGMALACRKCIGNEISGLKF*LSLISC
Trigger: ACAGCTAATAAGTGACAGCCAGAATTTAAGCCCAGA...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATAGATAGCAAAATCTGTTaGGCTCCAAATAGAGAAACT +
Preference number: 2 (lower is better)
Translates to: KQFKGMALACRKCIGNEIDSKIC*APNRET
Trigger: AGTTTCTCTATTTGGAGCCCAACAGATTTTGCTATC...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 90 bp GGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTATaGCTGTTATCTATGAAACAAAATCTAAATTATTACCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GPSVSPSNVITPLLV*LLSMKQNLNYYQLC
Trigger: GCAGAGCTGGTAATAATTTAGATTTTGTTTCATAGATAACAGCAATACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp TGGCTGTGTGCTCCCCACACCCTGGAGCTCTTCCAGTaGTTCTTCCGGGTTCCCCTGGTAGGCTGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: WLCAPHTLELFQ*FFRVPLVGWPR
Trigger: TCTGGGCCAGCCTACCAGGGGAACCCGGAAGAAGCACTGGAAGAGCTCCAGGGTGTGGGGAGCACACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp GGGGCCCAAGCCAGGGGGCAGGGCTGGAATACAGCCTaGCTAGGCCAATTTGTCAAAGCAGGGATTTCCCTG +
Preference number: 3 (lower is better)
Translates to: GAQARGQGWNTA*LGQFVKAGISL
Trigger: CAGGGAAATCCCTGCTTTGACAAATTGGCCTAGCCAGGCTGTATTCCAGCCCTGCCCCCTGGCTTGGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp CCATGCATGATTCCCAACAGCACTGCTCTTGATCCCTaGGTGGAGACCCACACCCTGTGGGGCTTCCCTACC +
Preference number: 3 (lower is better)
Translates to: PCMIPNSTALDP*VETHTLWGFPT
Trigger: GGTAGGGAAGCCCCACAGGGTGTGGGTCTCCACTCAGGGATCAAGAGCAGTGCTGTTGGGAATCATGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp GTGAGCATCTCTCCTTCCCCCAGTGCTCACTGTGGGTaGGCTACACCAGGCCTGTGGAAGGATTTTGGTCTC +
Preference number: 3 (lower is better)
Translates to: VSISPSPSAHCG*ATPGLWKDFGL
Trigger: GAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTaGCACAGCCTCCGGAGTACCTGGGACTACAGGCGC +
Preference number: 3 (lower is better)
Translates to: GHKLPVFNKPTI*HSLRSTWDYRR
Trigger: GCGCCTGTAGTCCCAGGTACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp TCCCGCCAGCTTTGTACAGAGTACACAAGGGGCCCCTaGTTATCTCCCAACAAACGTGGGCTAAGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: SRQLCTEYTRGP*LSPNKRGLRRR
Trigger: CCTCCTCCTTAGCCCACGTTTGTTGGGAGATAAGCAGGGGCCCCTTGTGTACTCTGTACAAAGCTGGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp AGATGTGAGCATCTCTCCTTCCCCCAGTGCTCACTGTaGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGG +
Preference number: 3 (lower is better)
Translates to: RCEHLSFPQCSL*VRYTRPVEGFW
Trigger: CCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp AGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCCCTGTGGGCCTGTCAA +
Preference number: 3 (lower is better)
Translates to: RRARDSQRLAST*TGKANSLWACQ
Trigger: TTGACAGGCCCACAGGGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR GCA 72 bp AGTATCAAGAGATGTGAGCATCTCTCCTTCCCCCAGTaGTCACTGTGGGTGCGCTACACCAGGCCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: SIKRCEHLSFPQ*SLWVRYTRPVE
Trigger: TTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCTCTTGATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CCCAGTGCTCACTGTGGGTGCGCTACACCAGGCCTGTaGAAGGATTTTGGTCTCAACAGGCTAGACTCTTTC +
Preference number: 3 (lower is better)
Translates to: PSAHCGCATPGL*KDFGLNRLDSF
Trigger: GAAAGAGTCTAGCCTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CTCTTCCAGTGCTTCTTCCGGGTTCCCCTGGTAGGCTaGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LFQCFFRVPLVG*PRFLRTHKSWV
Trigger: CACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCGGAAGAAGCACTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAAATGCTTCTGTCCCACTaGGACCTCTTGTGTGGTGAC +
Preference number: 3 (lower is better)
Translates to: EESTGFSETGFHLNREGQMLLSH*DLLCGD
Trigger: GTCACCACACAAGAGGTCCAAGTGGGACAGAAGCAT...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR GCA 72 bp AACAGCAGAGAACACTTCAGGGTTTCTCACCTAGGGTaGTCTGTGATGACTCAGGGACTGGCCTGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: NSREHFRVSHLG*SVMTQGLAWLL
Trigger: AAGGAGCCAGGCCAGTCCCTGAGTCATCACAGAGCACCCTAGGTGAGAAACCCTGAAGTGTTCTCTGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTaGTCTCAACAGGCTAGACTCTTTCCAGTTCAGAGC +
Preference number: 3 (lower is better)
Translates to: LWVRYTRPVEGF*SQQARLFPVQS
Trigger: GCTCTGAACTGGAAAGAGTCTAGCCTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTAAGGATCTCCAGCGCCTaGATGCTTCTGTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLRISSA*MLLSHL
Trigger: CAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCCT...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR CAA 90 bp TGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCAG +
Preference number: 3 (lower is better)
Translates to: WACQHQLQFSRPYRRPLTAGKHC*RYEDLQ
Trigger: CTGGAGATCCTCATACCTCAAACAGTGCTTCCCTGC...AGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR TCA 72 bp AAAACGAGCAGCAGTAGGGCTGAGTATCAAGAGATGTaGGCATCTCTCCTTCCCCCAGTGCTCACTGTGGGT +
Preference number: 3 (lower is better)
Translates to: KTSSSRAEYQEM*ASLLPPVLTVG
Trigger: ACCCACAGTGAGCACTGGGGGAAGGAGAGATGCTCACATCTCTTGATACTCAGCCCTACTGCTGCTCGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp CTCATACCCTCCATGCACTGGATGTTCCGCTCATGGTaGGATCTTCTGAGGCCTTGGCCAAGAACACAAGGA +
Preference number: 3 (lower is better)
Translates to: LIPSMHWMFRSW*DLLRPWPRTQG
Trigger: TCCTTGTGTTCTTGGCCAAGGCCTCAGAAGATCTCACCATGAGCGGAACATCCAGTGCATGGAGGGTATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp ACTATGGGGGACCAGCCGGCAAGGCCAAGTAGGCCTTaGAATCTAGGTGGCGCTATTTCTCTACTTTTTAGG +
Preference number: 3 (lower is better)
Translates to: TMGDQPARPSRP*NLGGAISLLFR
Trigger: CCTAAAAAGTAGAGAAATAGCGCCACCTAGATTGCAAGGCCTACTTGGCCTTGCCGGCTGGTCCCCCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTaGCTTCCACTTGAACAGGGAAGGCCAATTCCCTGT +
Preference number: 3 (lower is better)
Translates to: HQKRGEHGILRD*LPLEQGRPIPC
Trigger: ACAGGGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CCA 72 bp GAGAGGGTTGGGGCTGAGGAGACCAGTTGTTCTGGCTaGTTTACACATTGGCTATCGATTCCTTGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: ERVGAEETSCSG*FTHWLSIPCRE
Trigger: TTCCCTGCAAGGAATCGATAGCCAATGTGTAAACCAGCCAGAACAACTGGTCTCCTCAGCCCCAACCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR CAA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGTATTTTCTCCAAGCTaGCAGGGGAAGCCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQVFSPS*QGKPFH
Trigger: ATGGAAAGGCTTCCCCTGCAAGCTTGGAGAAAATAC...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp GTGGTGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATaGGGCGGGAGGATTGATAAACTACCCCACGTGGTA +
Preference number: 3 (lower is better)
Translates to: VVCAFSPSYAEG*GGRIDKLPHVV
Trigger: TACCACGTGGGGTAGTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR TCA 72 bp GAGTCTGTGCTGTTACAGTACAGGGAATGCCCAGGGTaGAGAACCGGTATTTTCTCCAAGCTTGCAGGGGAA +
Preference number: 3 (lower is better)
Translates to: ESVLLQYRECPG*RTGIFSKLAGE
Trigger: TTCCCCTGCAAGCTTGGAGAAAATACCGGTTCTTCACCCTGGGCATTCCCTGTACTGTAACAGCACAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp CTAGCTCCCTCACTTGGCACTGTAATGCCAGACTCATaGCCATCAGAGGACGAATCAAATGTTGGGAGACCA +
Preference number: 3 (lower is better)
Translates to: LAPSLGTVMPDS*PSEDESNVGRP
Trigger: TGGTCTCCCAACATTTGATTCGTCCTCTGATGGGCATGAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
3UTR CCA 72 bp TGGGTGCTGAGTGGGTGGAAGGATAGCAAAATCTGTTaGGCTCCAAATAGAGAAACTGAGTGGGGTGGGACT +
Preference number: 3 (lower is better)
Translates to: WVLSGWKDSKIC*APNRETEWGGT
Trigger: AGTCCCACCCCACTCAGTTTCTCTATTTGGAGCCCAACAGATTTTGCTATCCTTCCACCCACTCAGCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CACCTAGGGTGCTCTGTGATGACTCAGGGACTGGCCTaGCTCCTTTGGGTCATTCATCAAAGCCATTTTGAA +
Preference number: 3 (lower is better)
Translates to: HLGCSVMTQGLA*LLWVIHQSHFE
Trigger: TTCAAAATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGAGTCATCACAGAGCACCCTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGTGTGTGGTGCTTTCTaGCTGACTTGCCCTATATAC +
Preference number: 3 (lower is better)
Translates to: TKREESTGFSETGFHLNRVCGAF*LTCPIY
Trigger: GTATATAGGGCAAGTCAGCAAGAAAGCACCACACAC...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CAA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCACTGGCCTGGCTCCTTaGGGTCATTCATCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFTGLAP*GHSSKP
Trigger: TGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGT...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp GGAGAATCACTTGAACACAGGAGGTGGAGTTTGCAGTaGGCCAAAATTGTGCGATTGTACTCCAGCCTAGGC +
Preference number: 3 (lower is better)
Translates to: GESLEHRRWSLQ*AKIVRLYSSLG
Trigger: GCCTAGGCTGGAGTACAATCGCACAATTTTGGCTCACTGCAAACTCCACCTCCTGTGTTCAAGTGATTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp CACTATCACCACCAACAGGGGCATTATGCTCCTTGCTaGATGGCCACAAACTGCCTGTGTTCAATAAGCCCA +
Preference number: 3 (lower is better)
Translates to: HYHHQQGHYAPC*MATNCLCSISP
Trigger: TGGGCTTATTGAACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGTGATAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp ACATTGGCTATCGATTCCTTGCAGGGAAGCACTGTTTaGGGTATGAGGATCTCCAGCGCCTTGATGCTTCTG +
Preference number: 3 (lower is better)
Translates to: TLAIDSLQGSTV*GMRISSALMLL
Trigger: CAGAAGCATCAAGGCGCTGGAGATCCTCATACCTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR GCA 72 bp TCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTGTaGTGTTACAGTACAGGGAATGCCCAGGGTGAAGAA +
Preference number: 3 (lower is better)
Translates to: SGPAVMKNVLSL*CYSTGNAQGEE
Trigger: TTCTTCACCCTGGGCATTCCCTGTACTGTAACAGCACAGACTCAAGACATTTTTCATCACAGCGGGGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp ATCCCTTGGAAATCCTCCTTGATCTGGGAGACTGGCTaGCTGGTGACAAGAGAAGAGAATGACCCTAGTGAT +
Preference number: 3 (lower is better)
Translates to: IPWKSSLIWETG*LVTREENDPSD
Trigger: ATCACTAGGGTCATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCAAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CTGGGAAGAAAAATCCCCACGGGAAGCTCCAGAGAATaGGCTATATTGCTGACCAGGAAGGGAGATATAGGA +
Preference number: 3 (lower is better)
Translates to: LGRKIPTGSSRE*AILLTRKGDIG
Trigger: TCCTATATCTCCCTTCCTGGTCAGCAATATAGCCCATTCTCTGGAGCTTCCCGTGGGGATTTTTCTTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp GCTGAGGAGACCAGTTGTTCTGGCTGGTTTACACATTaGCTATCGATTCCTTGCAGGGAAGCACTGTTTGAG +
Preference number: 3 (lower is better)
Translates to: AEETSCSGWFTH*LSIPCREALFE
Trigger: CTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCAATGTGTAAACCAGCCAGAACAACTGGTCTCCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
3UTR-3UTR CAA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGTGATGAAAAATGTCTaGAGTCTGTGCTGTTACAGT +
Preference number: 3 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQVMKNV*SLCCYS
Trigger: ACTGTAACAGCACAGACTCAAGACATTTTTCATCAC...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp ATACAACACATTTCAGAAGGGACTCCCAGCAGCCCCTaGACCCTACTCCCCAATTCTAACTCTGCTACTGTT +
Preference number: 3 (lower is better)
Translates to: IQHISEGTPSSP*TLLPNSNSATV
Trigger: AACAGTAGCAGAGTTAGAATTGGGGAGTAGGGTTCAGGGGCTGCTGGGAGTCCCTTCTGAAATGTGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp GGAACTTCCTCGAGGTCCCAAGTCCTGCTCCTGGTTTaGTGGCTTGCTCGTGTAAACCACCTTATATTATTT +
Preference number: 3 (lower is better)
Translates to: GTSSRSQVLLLV*WLARVNHLILF
Trigger: AAATAATATAAGGTGGTTTACACGAGCAAGCCAGCAAACCAGGAGCAGGACTTGGGACCTCGAGGAAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp CTGATGGCTAGACTTCATCCAGAGACAACAATGGGGTaGGACCCAGTGAAGGAAGTGAATTGGGTTATGAGT +
Preference number: 3 (lower is better)
Translates to: LMARLHPETTMG*DPVKEVNWVMS
Trigger: ACTCATAACCCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCTAGCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CAA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAATGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTC +
Preference number: 3 (lower is better)
Translates to: LHQKRGEHGILRDWLPLECFLAD*PYIPKV
Trigger: GACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCA...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CAA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATACCAACAGCACTGCTCTaGATCCCTGAGTGGAGACCC +
Preference number: 3 (lower is better)
Translates to: KQFKGMALACRKCIGNEIPTALL*IPEWRP
Trigger: GGGTCTCCACTCAGGGATCAAGAGCAGTGCTGTTGG...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCAGTGTGTGGTGCTTTCTaGCTGACTTGCCCTATATAC +
Preference number: 3 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPVCGAF*LTCPIY
Trigger: GTATATAGGGCAAGTCAGCAAGAAAGCACCACACAC...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CAA 90 bp ACCACCAACAGGGGCATTATGCTCCTTGCTGAATGGCCACAAACTGCCTGTGTTAAAATGCATCCAAGTTaGGCAAAGGAAAGCAGCAAT +
Preference number: 3 (lower is better)
Translates to: TTNRGIMLLAEWPQTACVKMHPS*AKESSN
Trigger: ATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTTT...AACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp TGTCACCCATTTCTGACTGGCCGTCAATCCTATCAGGGGTCCATAAAGCTAGGAAATACTCCAAAGCAATaGAAAGAGTCCCTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: CHPFLTGRQSYQGSIKLGNTPKQ*KESLLP
Trigger: TGGGAGAAGGGACTCTTTCAATTGCTTTGGAGTATT...TCCTAGCTTTATGGACCCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp TTTTCTGTCTTGAGTAAGGGCTGTCTTTACCATGCATaGTTCCCAACAGCACTGCTCTTGATCCCTGAGTGG +
Preference number: 3 (lower is better)
Translates to: FSVLSKGCLYHA*FPTALLLIPEW
Trigger: CCACTCAGGGATCAAGAGCAGTGCTGTTGGGAATCATGCATGGTAAAGACAGCCCTTACTCAAGACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp CACCAGAAAGACAACTTAGGAAATAGCTCCTGGCTGTaGGAACCTAAGAGGTATGCATGGTTCTGGATGGGA +
Preference number: 3 (lower is better)
Translates to: HQKDNLGNSSWL*EPKRYAWFWMG
Trigger: TCCCATCCAGAACCATGCATACCTCTTAGGTTCTCACAGCCAGGAGCTATTTCCTAAGTTGTCTTTCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CCA 72 bp GAAAAGTTATCAGCAGTGACTGGGAATGAGCCTTGGTaGAGATCTCAGACTCTGCTAGCAGGAAAAAGCATG +
Preference number: 3 (lower is better)
Translates to: EKLSAVTGNEPW*RSQTLLAGKSM
Trigger: CATGCTTTTTCCTGCTAGCAGAGTCTGAGATCTCCACCAAGGCTCATTCCCAGTCACTGCTGATAACTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAGACTGGCTTCCACTaGAACAGGGAAGGCCAATTC +
Preference number: 3 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESETGFH*NREGQF
Trigger: GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTC...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CAA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCAAGTGAAGGAAGTGAATaGGGTTATGAGTTCCACAGC +
Preference number: 3 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSEGSE*GYEFHS
Trigger: GCTGTGGAACTCATAACCCAATTCACTTCCTTCACT...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR TCA 72 bp TGGATATTAGTAACAGAGACGAGGAACCAAGGTTCTTaGGCTCTGAGTTTGGTGGCTTCCTTGCAGTATGTC +
Preference number: 3 (lower is better)
Translates to: WILVTETRNQGS*ALSLVASLQYV
Trigger: GACATACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCTGTTACTAATATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp AGAGGTATGCATGGTTCTGGATGGGAATCTCAAAGATaGTGGCGGTCATCAAATGGAACTGAAGCAGGTAGA +
Preference number: 3 (lower is better)
Translates to: RGMHGSGWESQR*WRSSNGTEAGR
Trigger: TCTACCTGCTTCAGTTCCATTTGATGACCGCCATCATCTTTGAGATTCCCATCCAGAACCATGCATACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp TGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACTaGTGGCTAGACTTCATCCAGAGACAACAATGGGGT +
Preference number: 3 (lower is better)
Translates to: CRKVYEESEGPD*WLDFIQRQQWG
Trigger: ACCCCATTGTTGTCTCTGGATGAAGTCTAGCCATCAGTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CCA 72 bp AAAGGAAGGAAAGAAAAGGGAGTCCAAATGTACCGCTaGATAAAAACGAGCAGCAGTAGGGCTGAGTATCAA +
Preference number: 3 (lower is better)
Translates to: KGRKEKGVQMYR*IKTSSSRAEYQ
Trigger: TTGATACTCAGCCCTACTGCTGCTCGTTTTTATCCAGCGGTACATTTGGACTCCCTTTTCTTTCCTTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR TCA 72 bp ATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTaGCTGTATCACTATTTTAGAAATATTGCTGCCATG +
Preference number: 3 (lower is better)
Translates to: INFSSLALTGGL*LYHYFRNIAAM
Trigger: CATGGCAGCAATATTTCTAAAATAGTGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR TCA 72 bp AAAGCCATTTTGAAGCAAGGACTGCTTAGTAGGAGCTaGGCTTTCCACCAGAAAGACAACTTAGGAAATAGC +
Preference number: 3 (lower is better)
Translates to: KAILKQGLLSRS*AFHQKDNLGNS
Trigger: GCTATTTCCTAAGTTGTCTTTCTGGTGGAAAGCTCAGCTCCTACTAAGCAGTCCTTGCTTCAAAATGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR GCA 72 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTaGCCACCATCAAGAGAGTTCTTGAGATCAAAGTTT +
Preference number: 3 (lower is better)
Translates to: LAKESSNHLSVL*PPSREFLRSKF
Trigger: AAACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR-3UTR CAA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTATTTTACCTACAATTTaGAGGGATTCACAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: HSSRAISITFKCHHTVISILPTI*RDSQAS
Trigger: AGAGGCCTGTGAATCCCTCAAAATTGTAGGTAAAAT...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp GATGGGATGAAAGATCAAGAAAGATGGACTTCTAGATGTTCAAATAGAGAAGGAAGATCTTCTGAGGCCTaGGCCAAGAACACAAGGAAA +
Preference number: 3 (lower is better)
Translates to: DGMKDQERWTSRCSNREGRSSEA*AKNTRK
Trigger: TTTCCTTGTGTTCTTGGCCAAGGCCTCAGAAGATCT...TCCTTCTCTATTTGAACATCTAGAAGTCCATCTTTCTTGATCTTTCATCCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATATCGGTCTCTATTGTTTaGAGTGAGGCCCAATATTTC +
Preference number: 3 (lower is better)
Translates to: KQFKGMALACRKCIGNEISVSIV*SEAQYF
Trigger: GAAATATTGGGCCTCACTCAAAACAATAGAGACCGA...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR-3UTR CAA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAATGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTC +
Preference number: 3 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFECFLAD*PYIPKV
Trigger: GACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCA...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR TCA 72 bp TTTAACCACAATATTCTCGGTCTCTATTGTTTTGAGTaGGGCCCAATATTTCCACAGCAGGATTATAGGATC +
Preference number: 3 (lower is better)
Translates to: FNHNILGLYCFE*GPIFPQQDYRI
Trigger: GATCCTATAATCCTGCTGTGGAAATATTGGGCCTCACTCAAAACAATAGAGACCGAGAATATTGTGGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTGCTTCGGGGCAAGAATaGCTGTGGCAGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAASGQE*LWQGLW
Trigger: CCAGAGGCCCTGCCACAGGCATTCTTGCCCCGAAGC...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTGCTCACTGCAGCCTCTaGCTCCCGGGTTCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAAHCSL*LPGSSD
Trigger: ATCGCTGGAACCCGGGAGGCAGAGGCTGCAGTGAGC...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCGCACGCACGCTTTCCTaGCCGCTCGCGCAAACCGAA +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFARTLS*PLAQTE
Trigger: TTCGGTTTGCGCGAGCGGGCAGGAAAGCGTGCGTGC...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTGCAGGAGGAGCAGTaGGCCGCTTGTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GEHGILRDWLPLEQGRPILQEEQ*AACSAP
Trigger: AGGAGCTGAACAAGCGGCTCACTGCTCCTCCTGCAG...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CGGGTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGAGCAACCTTTGGGGATaGTGGGGGCAGTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: RVPLVGWPRFLRTHKSWVSNLWG*WGQWME
Trigger: TTCCATCCACTGCCCCCATCATCCCCAAAGGTTGCT...CACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTGAGTGTGGCACTGCATaGTCCTTTAACTACTGGCCC +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAECGTA*SFNYWP
Trigger: GGGCCAGTAGTTAAAGGAGCATGCAGTGCCACACTC...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCAGCTCCTTGGCTCGCTaGCTGACCACACTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGSSLAR*LTTLVS
Trigger: GGACACTAGTGTGGTCAGCCAGCGAGCCAAGGAGCT...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CGGGTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGTCTCTGAGGAGTATCTaGGGCTGGCTGGCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: RVPLVGWPRFLRTHKSWVSLRSI*GWLARD
Trigger: GTCTCTAGCCAGCCAGCCCCAGATACTCCTCAGAGA...CACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCGTGCTCCCCACACCCTaGAGCTCTTCCAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGVLPTP*SSSSAS
Trigger: AGAAGCACTGGAAGAGCTCCAGGGTGTGGGGAGCAC...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TTCTGTCTTCAATCGATCTCGAATCAGCGTAGCCCCACTCTCCTGGTAGTCTTGGAGGAGGCAGGGTCTTaGGATACAGGGGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FCLQSISNQRSPTLLVVLEEAGS*DTGAGP
Trigger: AGGCCCCGCCCCTGTATCCCAAGACCCTGCCTCCTC...CAAGACTACCAGGAGAGTGGGGCTACGCTGATTCGAGATCGATTGAAGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450447.1
3UTR CAA 72 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTaGAACAGGGAAGGCCAATTCCCTGTGGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFH*NREGQFPVGLS
Trigger: TGACAGGCCCACAGGGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CGGGTTCCCCTGGTAGGCTGGCCCAGATTCTTGAGAACCCATAAGAGTTGGGTGGTAGCTTCGCTAGGGTaGGCAGCGTCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: RVPLVGWPRFLRTHKSWVVASLG*AASFNN
Trigger: ATTGTTGAAGGACGCTGCTCACCCTAGCGAAGCTAC...CACCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGCCCCCACTGAGGCATaGGAAAAGGAGGTGCTACCC +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDAPTEA*EKEVLP
Trigger: GGGTAGCACCTCCTTTTCTCATGCCTCAGTGGGGGC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTCTGCTTAGTAGGAGCTaGGCTTTCCACCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAALLSRS*AFHQKD
Trigger: GTCTTTCTGGTGGAAAGCTCAGCTCCTACTAAGCAG...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGTCGCCCAGGGTGGAGTaGAGTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLSPRVE*SGTISA
Trigger: AGCTGAGATCGTGCCACTGCACTCCACCCTGGGCGA...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCAAGGAGTATCTGGGGCTaGCTGGCTAGAGACGCTAGG +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPRSIWG*LARDAR
Trigger: CCTAGCGTCTCTAGCCAGCCAGCCCCAGATACTCCT...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATCTCTGAGGAGTATCTaGGGCTGGCTGGCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQSLRSI*GWLARD
Trigger: GTCTCTAGCCAGCCAGCCCCAGATACTCCTCAGAGA...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTATGTGCATGTAGAGTaGGGGTTGGGCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFYVHVE*GLGQAG
Trigger: CCCAGCCTGGCCCAACCCCCACTCTACATGCACATA...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACTCAGGGACTGGCCTGGCTCCTTTGGGTCATTCATCAAAGCCATTTTGAAGCACCCCAGTGCTCACTGTaGGTGCGCTACACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TQGLAWLLWVIHQSHFEAPQCSL*VRYTRP
Trigger: AGGCCTGGTGTAGCGCACCCACAGTGAGCACTGGGG...TGCTTCAAAATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGAATGCCGAGCTGGGATaGGCTTCCCCTTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRNAELG*ASPSSC
Trigger: GCAGCTGGAAGGGGAAGCCCATCCCAGCTCGGCATT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAAACAACAATGCCGAGCTaGGATGGGCTTCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQTTMPS*DGLPLP
Trigger: TGGAAGGGGAAGCCCATCCCAGCTCGGCATTGTTGT...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCTCTTGATCCCTGAGTaGAGACCCACACCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRLLIPE*RPTPCG
Trigger: CCCACAGGGTGTGGGTCTCCACTCAGGGATCAAGAG...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGCTGCAGGAGGAGCAGTaGGCCGCTTGTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWLQEEQ*AACSAP
Trigger: AGGAGCTGAACAAGCGGCTCACTGCTCCTCCTGCAG...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAAGGATCTCCAGCGCCTTaGTGCTTCTGTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEGSPAP*CFCPTW
Trigger: CCAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCC...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTTCTCTGCAGAGGGCCTaGAGTACCCGTGGACTCTTT +
Preference number: 4 (lower is better)
Translates to: WACQHQLQFSRPYRRPLTSLQRA*STRGLF
Trigger: AAAGAGTCCACGGGTACTTCAGGCCCTCTGCAGAGA...AGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
CDS-3UTR TCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAAAGAGAAGTGGGTCTCTaGGGAGTATCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEREVGL*GVSGAG
Trigger: GCCAGCCCCAGATACTCCTCAGAGACCCACTTCTCT...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGACTCCCAGCAGCCCCTaGACCCTACTCCCCAATTCT +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLTPSSP*TLLPNS
Trigger: AGAATTGGGGAGTAGGGTTCAGGGGCTGCTGGGAGT...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCAGTGCTCACTGTGGGTaGGCTACACCAGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLSAHCG*ATPGLW
Trigger: CCACAGGCCTGGTGTAGCGCACCCACAGTGAGCACT...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACTGGAGCTCTTCCAGTaGTTCTTCCGGGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLLELFQ*FFRVPL
Trigger: CAGGGGAACCCGGAAGAAGCACTGGAAGAGCTCCAG...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGAGCTCCTTGGCTCGCTaGCTGACCACACTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRSSLAR*LTTLVS
Trigger: GGACACTAGTGTGGTCAGCCAGCGAGCCAAGGAGCT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTGGCCTGAAGTACCCGTaGACTCTTTCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GEHGILRDWLPLEQGRPIGLKYP*TLSQVL
Trigger: CAGCACCTGAGAAAGAGTCCACGGGTACTTCAGGCC...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
CDS-3UTR CCA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCATTAGCCGGGCTTGGTaGCAGGCATCTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: TEPPPKERRARDSQRLASISRAW*QASNPS
Trigger: GCTGGGATTAGATGCCTGCCACCAAGCCCGGCTAAT...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGGAGACCCACACCCTGTaGGGCTTCCCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LAKESSNHLSVLCPPSREETHTL*GFPTSS
Trigger: GGAGCTGGTAGGGAAGCCCCACAGGGTGTGGGTCTC...CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGGTAGCTTCGCTAGGGTaGGCAGCGTCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRVASLG*AASFNN
Trigger: ATTGTTGAAGGACGCTGCTCACCCTAGCGAAGCTAC...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTCAGGGAAGCACTGTTTaGGGTATGAGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALQGSTV*GMRISS
Trigger: GCTGGAGATCCTCATACCTCAAACAGTGCTTCCCTG...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: GEHGILRDWLPLEQGRPIRLAST*TGKANS
Trigger: GGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCT...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACTTGGAAATCCTCCTTaGTCTGGGAGACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLELGNPP*SGRLAA
Trigger: GGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCAAG...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTTGGTGTTCACAGACTTaGGCTGCAAGTGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAWCSQT*AASEKI
Trigger: GATTTTCTCACTTGCAGCTCAAGTCTGTGAACACCA...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp CTTGGATCTCTAGGTCTTTCATATGAAGTAACGTTGCTAGCTCCCTCACTTGGCGCACGCACGCTTTCCTaGCCGCTCGCGCAAACCGAA +
Preference number: 4 (lower is better)
Translates to: LGSLGLSYEVTLLAPSLGARTLS*PLAQTE
Trigger: TTCGGTTTGCGCGAGCGGGCAGGAAAGCGTGCGTGC...GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGAAAGACCTAGAGATCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR GCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATGCATCAACAGGCCTTaGTCCAGTTCTTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQCINRP*SSSSIV
Trigger: GACGATGGAAGAACTGGAGCAAGGCCTGTTGATGCA...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
CDS-3UTR GCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCATCTGGGAGACTGGCTaGCTGGTGACAAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFIWETG*LVTREE
Trigger: CTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGAT...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCATGTTAGACAACAATaGCGAGCTGGGATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGHVRQQ*RAGMGF
Trigger: GAAGCCCATCCCAGCTCGGCATTGTTGTCTAACATG...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGCTAGCTCCCTCACTTaGCACTGTAATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: WACQHQLQFSRPYRRPLTASSLT*HCNARL
Trigger: GAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGC...AGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGGCCTGAAGTACCCGTaGACTCTTTCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLGLKYP*TLSQVL
Trigger: CAGCACCTGAGAAAGAGTCCACGGGTACTTCAGGCC...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
CDS-3UTR CCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGTATCTGGGGCTGGCTaGCTAGAGACGCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDVSGAG*LETLGK
Trigger: TTTCCCTAGCGTCTCTAGCCAGCCAGCCCCAGATAC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGTATCTGGGGCTGGCTaGCTAGAGACGCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRVSGAG*LETLGK
Trigger: TTTCCCTAGCGTCTCTAGCCAGCCAGCCCCAGATAC...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCAGGAGTATCTGGGGCTaGCTGGCTAGAGACGCTAGG +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLRSIWG*LARDAR
Trigger: CCTAGCGTCTCTAGCCAGCCAGCCCCAGATACTCCT...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTTCCTTGAAGAGCCCCTaGGGAGCAGACATCCTATTG +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALSLKSP*GADILL
Trigger: CAATAGGATGTCTGCTCCCCAGGGGCTCTTCAAGGA...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTAAGCAGGGATTTCCCTaGAGTTGCCTTAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAAKQGFP*SCLRMN
Trigger: ATTCATCCTAAGGCAACTCCAGGGAAATCCCTGCTT...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCCTTGATCTGGGAGACTaGCTGCCTGGTGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: TEPPPKERRARDSQRLASLDLGD*LPGDKR
Trigger: TCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAG...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGAGCAATGAGCTGCCCTaGACAAGAGCACCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLSNELP*TRAPCS
Trigger: GCTACAGGGTGCTCTTGTCCAGGGCAGCTCATTGCT...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCCACAGCCTCCGGAGTCTGGCCTGGCTCCTTTaGGTCATTCATCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: GHKLPVFNKPTICHSLRSLAWLL*VIHQSH
Trigger: ATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAG...ACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCACCTGTTGAAGATCTaGAACCAACAAGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGHLLKI*NQQGIA
Trigger: GGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTG...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGTAGCTTCGCTAGGGTaGGCAGCGTCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDVASLG*AASFNN
Trigger: ATTGTTGAAGGACGCTGCTCACCCTAGCGAAGCTAC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTGGACCTCTTGTGTGGTaGCTGCCATATACAGATCCT +
Preference number: 4 (lower is better)
Translates to: GEHGILRDWLPLEQGRPIGPLVW*LPYTDP
Trigger: AGGATCTGTATATGGCAGTCACCACACAAGAGGTCC...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGTCTCTGCAGAGGGCCTaGAGTACCCGTGGACTCTTT +
Preference number: 4 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWSLQRA*STRGLF
Trigger: AAAGAGTCCACGGGTACTTCAGGCCCTCTGCAGAGA...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000418099.5
CDS-3UTR TCA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACTTCCTCTTGACCTTTaGCAGCTGAGGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLLPLDL*QLRSLQ
Trigger: CTGCAGAGACCTCAGCTGTCAAAGGTCAAGAGGAAG...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTTTGGCTTCTTCCTCTTaGCCTTTGACAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALLASSS*PLTAEV
Trigger: GACCTCAGCTGTCAAAGGTCAAGAGGAAGAAGCCAA...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCTTGGCTTCTTCCTCTTaGCCTTTGACAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TEPPPKERRARDSQRLASLASSS*PLTAEV
Trigger: GACCTCAGCTGTCAAAGGTCAAGAGGAAGAAGCCAA...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTTGGCTTCTTCCTCTTaGCCTTTGACAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFLASSS*PLTAEV
Trigger: GACCTCAGCTGTCAAAGGTCAAGAGGAAGAAGCCAA...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGTCCATCCTCAGCAGCTaGGGCCACAACAGATTAACT +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRSILSS*GHNRLT
Trigger: AGTTAATCTGTTGTGGCCTCAGCTGCTGAGGATGGA...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTTCCATCCTCAGCAGCTaGGGCCACAACAGATTAACT +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALSILSS*GHNRLT
Trigger: AGTTAATCTGTTGTGGCCTCAGCTGCTGAGGATGGA...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTGTAGACAAGGCTTCCTaGGTGTGTGGTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALVDKAS*VCGAFL
Trigger: CAAGAAAGCACCACACACTCAGGAAGCCTTGTCTAC...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGAGCAGTGACTGGGAATaGGCCTTGGTGGAGATCTCA +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRSSDWE*ALVEIS
Trigger: TGAGATCTCCACCAAGGCTCATTCCCAGTCACTGCT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCCAATTCACTTCGATaGCAGTCACTACCACACAGC +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRPNSLR*QSLPHS
Trigger: GCTGTGTGGTAGTGACTGTCATCGAAGTGAATTGGG...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCAGGCAGGAGAATCACTTaGACACAGGAGGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPGRRIT*TQEVEF
Trigger: AAACTCCACCTCCTGTGTTCAAGTGATTCTCCTGCC...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TGTCACCCATTTCTGACTGGCCGTCAATCCTATCAGGGGTCCATAAAGCTAGGAGCTAGGATAGAGAACTaGGAGCCCAGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: CHPFLTGRQSYQGSIKLGARIEN*EPRAER
Trigger: CCTCTCAGCTCTGGGCTCTCAGTTCTCTATCCTAGC...TCCTAGCTTTATGGACCCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGCTGGCCCAGATTCTTaGGAACCCATAAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDAGPDS*EPIRVG
Trigger: CCCAACTCTTATGGGTTCTCAAGAATCTGGGCCAGC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACCCTGTCACCCATTTCTaGCTGGCCGTCAATCCTATC +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDPVTHF*LAVNPI
Trigger: GATAGGATTGACGGCCAGTCAGAAATGGGTGACAGG...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCCATTATGCTCCTTGCTaGATGGCCACAAACTGCCTG +
Preference number: 4 (lower is better)
Translates to: TEPPPKERRARDSQRLASHYAPC*MATNCL
Trigger: CAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATG...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAAGTAATGCCAGACTCATaGCCATCAGAGGACGAATCA +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQVMPDS*PSEDES
Trigger: TGATTCGTCCTCTGATGGGCATGAGTCTGGCATTAC...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCTCTTGTGTGGTGACTaGCATATACAGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGLLCGD*HIQILQ
Trigger: CTGCAGGATCTGTATATGGCAGTCACCACACAAGAG...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTTCCTGAGTGTGTGGTaGTTTCTTGCTGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFFLSVW*FLADLP
Trigger: GGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAA...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAACACCTATCTGTCTTGTaGCCACCATCAAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQHLSVL*PPSREF
Trigger: GAACTCTCTTGATGGTGGGCACAAGACAGATAGGTG...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCGGGGAGGTGGGCCACTaGTTTATTAAACACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TEPPPKERRARDSQRLASGEVGH*FIKHRE
Trigger: TTCCCTGTGTTTAATAAAGCAGTGGCCCACCTCCCC...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCCTGGTTTGCTGGCTTaGTCGTGTAAACCACCTTAT +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGPGLLA*SCKPPY
Trigger: ATAAGGTGGTTTACACGAGCAAGCCAGCAAACCAGG...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCATGAGAAAAGGAGGTaGTACCCAGCTAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPHEKRR*YPARVE
Trigger: TTCCACTCTAGCTGGGTAGCACCTCCTTTTCTCATG...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCTTCCATCACCAATGCTaGATGCCTCTGGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGFHHQC*MPLAVS
Trigger: TGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAA...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGGACGAATCAAATGTTaGGAGACCAGGGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQGRIKC*ETREGL
Trigger: TAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCC...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGCTAGCTCCCTCACTTaGCACTGTAATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDASSLT*HCNARL
Trigger: GAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCAAGGCCAATTCCCTGTaGGCCTGTCAACATCAACTT +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGKANSL*ACQHQL
Trigger: AAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTT...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGGGGATTCTCAGAGACTaGCTTCCACTTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRGILRD*LPLEQG
Trigger: TCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCC...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGTCTCTGAGGAGTATCTaGGGCTGGCTGGCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWSLRSI*GWLARD
Trigger: GTCTCTAGCCAGCCAGCCCCAGATACTCCTCAGAGA...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGGCTACCCAGCTAGAGTaGAAAGGGATGAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRATQLE*KGMRLS
Trigger: AGAAAGCCTCATCCCTTTCCACTCTAGCTGGGTAGC...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCGAGGAGGTAAGGGCTTaGGAAAATGGGAGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFEEVRA*ENGRSK
Trigger: CTTAGACCTCCCATTTTCCCAAGCCCTTACCTCCTC...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGAGACGAGGAACCAAGGTTCTTGAGCTCTGAGTTTGGTGGCTTCCTTGCAGTAGTTCCCCTGGTAGGCTaGCCCAGATTCTTGAGAACC +
Preference number: 4 (lower is better)
Translates to: RDEEPRFLSSEFGGFLAVVPLVG*PRFLRT
Trigger: GGTTCTCAAGAATCTGGGCCAGCCTACCAGGGGAAC...TACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCTTAACTACTGGCCCTTaGCCCAGCAGGACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGLTTGP*PSRTSN
Trigger: ATTACTTGTCCTGCTGGGCCAAGGGCCAGTAGTTAA...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGTCACCCATTTCTGACTaGCCGTCAATCCTATCAGGG +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRSPISD*PSILSG
Trigger: CCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGA...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACCATGTTGGCCAGGCTaGTCTCAAATTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEPCWPG*SQIPDL
Trigger: GAGGTCAGGAATTTGAGACCAGCCTGGCCAACATGG...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGACTCAGGGACTGGCCTaGCTCCTTTGGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRTQGLA*LLWVIH
Trigger: ATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGAGT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCACCTGTTGAAGATCTaGAACCAACAAGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRHLLKI*NQQGIA
Trigger: GGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTG...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGCTGCAGGAGGAGCAGTaGGCCGCTTGTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKLQEEQ*AACSAP
Trigger: AGGAGCTGAACAAGCGGCTCACTGCTCCTCCTGCAG...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGGGATCTCCAGCGCCTTaGTGCTTCTGTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEGSPAP*CFCPTW
Trigger: CCAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCC...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCCTTCCTCTTGACCTTTaGCAGCTGAGGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLLPLDL*QLRSLQ
Trigger: CTGCAGAGACCTCAGCTGTCAAAGGTCAAGAGGAAG...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTATCCATCCTCAGCAGCTaGGGCCACAACAGATTAACT +
Preference number: 4 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLSILSS*GHNRLT
Trigger: AGTTAATCTGTTGTGGCCTCAGCTGCTGAGGATGGA...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCCACAGCCTCCGGAGTAAGCTTCTTTCAAGGTaGAGCTTGGAAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GHKLPVFNKPTICHSLRSKLLSR*SLEAVL
Trigger: GAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTT...ACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGAGAGAAGTGGGTCTCTaGGGAGTATCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEREVGL*GVSGAG
Trigger: GCCAGCCCCAGATACTCCTCAGAGACCCACTTCTCT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGTCTGAAGGACCAGACTaGTGGCTAGACTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRSEGPD*WLDFIQ
Trigger: CTGGATGAAGTCTAGCCATCAGTCTGGTCCTTCAGA...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAATCTGAAGGACCAGACTaGTGGCTAGACTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLESEGPD*WLDFIQ
Trigger: CTGGATGAAGTCTAGCCATCAGTCTGGTCCTTCAGA...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACAGGAACCAAGGTTCTTaGGCTCTGAGTTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDRNQGS*ALSLVA
Trigger: AGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCT...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGACTGCTCTTGATCCCTaGGTGGAGACCCACACCCTG +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGETALDP*VETHTL
Trigger: CAGGGTGTGGGTCTCCACTCAGGGATCAAGAGCAGT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCCACAGCCTCCGGAGTTGGGAATCTCAAAGATaGTGGCGGTCATCAAATGGA +
Preference number: 4 (lower is better)
Translates to: GHKLPVFNKPTICHSLRSWESQR*WRSSNG
Trigger: TCCATTTGATGACCGCCATCATCTTTGAGATTCCCA...ACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp ACCACCAACAGGGGCATTATGCTCCTTGCTGAATGGCCACAAACTGCCTGTGTTTGCATCAACAGGCCTTaGTCCAGTTCTTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: TTNRGIMLLAEWPQTACVCINRP*SSSSIV
Trigger: GACGATGGAAGAACTGGAGCAAGGCCTGTTGATGCA...AACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp ATGCCCATCAGAGGACGAATCAAATGTTGGGAGACCAGGGAAGGACTAGCTAGCTGCATCAACAGGCCTTaGTCCAGTTCTTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: MPIRGRIKCWETREGLASCINRP*SSSSIV
Trigger: GACGATGGAAGAACTGGAGCAAGGCCTGTTGATGCA...GCTAGCTAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCTCTGATGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR GCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAAGCCATATACAGATCCTaGAGATTCATGACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQAIYRS*RFMTKG
Trigger: GCCCTTTGTCATGAATCTGCAGGATCTGTATATGGC...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTCTTGTGTGGTGACTaGCATATACAGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPLLCGD*HIQILQ
Trigger: CTGCAGGATCTGTATATGGCAGTCACCACACAAGAG...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTTGGCTATCGATTCCTTaGAGGGAAGCACTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALWLSIP*REALFE
Trigger: CTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCA...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCATGGCTATCGATTCCTTaGAGGGAAGCACTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPWLSIP*REALFE
Trigger: CTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCA...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTTCCTGAGTGTGTGGTaGTTTCTTGCTGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDFLSVW*FLADLP
Trigger: GGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAA...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTCACCTATCTGTCTTGTaGCCACCATCAAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALHLSVL*PPSREF
Trigger: GAACTCTCTTGATGGTGGGCACAAGACAGATAGGTG...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp GAGCTGCCCTGGACAAGAGCACCCTGTAGCAGCTTCCAGGGCATCAATGCAGCTAATGTCTTGAGTCTGTaGTGTTACAGTACAGGGAAT +
Preference number: 4 (lower is better)
Translates to: ELPWTRAPCSSFQGINAANVLSL*CYSTGN
Trigger: ATTCCCTGTACTGTAACAGCACAGACTCAAGACATT...AGCTGCATTGATGCCCTGGAAGCTGCTACAGGGTGCTCTTGTCCAGGGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp ACCACCAACAGGGGCATTATGCTCCTTGCTGAATGGCCACAAACTGCCTGTGTTAGGCCAAGTAGGCCTTaGAATCTAGGTGGCGCTATT +
Preference number: 4 (lower is better)
Translates to: TTNRGIMLLAEWPQTACVRPSRP*NLGGAI
Trigger: AATAGCGCCACCTAGATTGCAAGGCCTACTTGGCCT...AACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCCATAGAGCAATGAGCTaGCCTGGACAAGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLHRAMS*PGQEHP
Trigger: AGGGTGCTCTTGTCCAGGGCAGCTCATTGCTCTATG...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TGGAAATCCTCCTTGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAAGAGAATCCAACAGGGGCATTATaGTCCTTGCTGAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: WKSSLIWETGCLVTREENPTGAL*SLLNGH
Trigger: GTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGG...ATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTATCACCAATGCTGCATaGCTCTGGCAGTTTCATGAT +
Preference number: 4 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPITNAA*LWQFHD
Trigger: ATCATGAAACTGCCAGAGGCATGCAGCATTGGTGAT...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR CCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCAAGCTCCTTGGCTCGCTaGCTGACCACACTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSSLAR*LTTLVS
Trigger: GGACACTAGTGTGGTCAGCCAGCGAGCCAAGGAGCT...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTGCTAGCTCCCTCACTTaGCACTGTAATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESASSLT*HCNARL
Trigger: GAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGC...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGGGAGACCAGTTGTTCTaGCTGGTTTACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRGDQLF*LVYTLA
Trigger: AGCCAATGTGTAAACCAGCCAGAACAACTGGTCTCC...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGGGATTCTCAGAGACTaGCTTCCACTTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRGILRD*LPLEQG
Trigger: TCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCC...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAAGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEGFLSV*CFLADL
Trigger: CAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCC...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDGFLSV*CFLADL
Trigger: CAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAAGATGGGGGCAGTGGATaGAAGGTTACTAGCTATATT +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQDGGSG*KVTSYI
Trigger: AATATAGCTAGTAACCTTCCATCCACTGCCCCCATC...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGGCCAGGGGGCAGGGCTaGAATACAGCCTGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLARGQG*NTAWLG
Trigger: GCCTAGCCAGGCTGTATTCCAGCCCTGCCCCCTGGC...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTGATCTTCTGAGGCCTTaGCCAAGAACACAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPDLLRP*PRTQGK
Trigger: TTTTCCTTGTGTTCTTGGCCAAGGCCTCAGAAGATC...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCATCCCAGGTGAGTCAATaGCTGTGTGCTCCCCACACC +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSQVSQ*LCAPHT
Trigger: GGTGTGGGGAGCACACAGCCATTGACTCACCTGGGA...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATACAGGCGTAAGCCATaGAGCCCAGTCTTAAATTTC +
Preference number: 4 (lower is better)
Translates to: EESTGFSETGFHLNREGQYRRKP*SPVLNF
Trigger: GAAATTTAAGACTGGGCTCCATGGCTTACGCCTGTA...TTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGGTGAGCCACTGCGCCTaGCCCACCACGCTAATTTTA +
Preference number: 4 (lower is better)
Translates to: LAKESSNHLSVLCPPSREVSHCA*PTTLIL
Trigger: TAAAATTAGCGTGGTGGGCCAGGCGCAGTGGCTCAC...CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCCTAAGAGGTATGCATaGTTCTGGATGGGAATCTCA +
Preference number: 4 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPPKRYA*FWMGIS
Trigger: TGAGATTCCCATCCAGAACCATGCATACCTCTTAGG...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCTCTGCAGAGGGCCGTaGACTCTTTCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGELCRGP*TLSQVL
Trigger: CAGCACCTGAGAAAGAGTCCACGGCCCTCTGCAGAG...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409720.5
CDS-3UTR TCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGATCCTGCAGATTCATaGCAAAGGGCTTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRDPADS*QRAFHH
Trigger: GTGATGGAAAGCCCTTTGTCATGAATCTGCAGGATC...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGATCCTGCAGATTCATaGCAAAGGGCTTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLDPADS*QRAFHH
Trigger: GTGATGGAAAGCCCTTTGTCATGAATCTGCAGGATC...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCACAGGGAAGCACTGTTTaGGGTATGAGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSQGSTV*GMRISS
Trigger: GCTGGAGATCCTCATACCTCAAACAGTGCTTCCCTG...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTCTCTGCAGAGGGCCTaGAGTACCCGTGGACTCTTT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSISLQRA*STRGLF
Trigger: AAAGAGTCCACGGGTACTTCAGGCCCTCTGCAGAGA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp TCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCCTTCCTCTTGACCTTTaGCAGCTGAGGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SKFGKGKQQSPICLVPTILPLDL*QLRSLQ
Trigger: CTGCAGAGACCTCAGCTGTCAAAGGTCAAGAGGAAG...GATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCAAGCTTCTTTCAAGGTaGAGCTTGGAAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFKLLSR*SLEAVL
Trigger: GAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTT...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCTTACAGGAGGCCTCTaGCTGTATCACTATTTTAGA +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGLTGGL*LYHYFR
Trigger: TCTAAAATAGTGATACAGTCAGAGGCCTCCTGTAAG...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGAGAGAAGTGGGTCTCTaGGGAGTATCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKREVGL*GVSGAG
Trigger: GCCAGCCCCAGATACTCCTCAGAGACCCACTTCTCT...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCCAAAAGCAGGGACTGTaGGTGCTTTTTATTCCATGC +
Preference number: 4 (lower is better)
Translates to: TEPPPKERRARDSQRLASQKQGL*VLFIPC
Trigger: GCATGGAATAAAAAGCACTCACAGTCCCTGCTTTTG...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACAGGGAATGCCCAGGGTaGAGAACCGGTATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINRECPG*RTGIFS
Trigger: GGAGAAAATACCGGTTCTTCACCCTGGGCATTCCCT...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTCGGTCTCTATTGTTTTaGGTGAGGCCCAATATTTCC +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALRSLLF*VRPNIS
Trigger: GGAAATATTGGGCCTCACTCAAAACAATAGAGACCG...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTAGGCTTTTTCTGTCTTaGGTAAGGGCTGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALRLFLS*VRAVFT
Trigger: GGTAAAGACAGCCCTTACTCAAGACAGAAAAAGCCT...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAACCCATTCCTCTCACGTaGCAGGACGCCCTGAAATCC +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQPIPLT*QDALKS
Trigger: GGATTTCAGGGCGTCCTGTCACGTGAGAGGAATGGG...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGACTTGAGCTGCAAGTaGGAAAATCCAATGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQDLSCK*ENPMGK
Trigger: TTTTCCCATTGGATTTTCTCACTTGCAGCTCAAGTC...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGCACTGTTTGAGGTATaGGGATCTCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIALFEV*GSPLEG
Trigger: GCCCTCCAGAGGAGATCCTCATACCTCAAACAGTGC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426304.5
CDS-3UTR GCA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTAGTAATGCCAGACTCATaGCCATCAGAGGACGAATCA +
Preference number: 4 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLVMPDS*PSEDES
Trigger: TGATTCGTCCTCTGATGGGCATGAGTCTGGCATTAC...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp ATGCCCATCAGAGGACGAATCAAATGTTGGGAGACCAGGGAAGGACTAGCTAGCGTAATGCCAGACTCATaGCCATCAGAGGACGAATCA +
Preference number: 4 (lower is better)
Translates to: MPIRGRIKCWETREGLASVMPDS*PSEDES
Trigger: TGATTCGTCCTCTGATGGGCATGAGTCTGGCATTAC...GCTAGCTAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCTCTGATGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR GCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGGCTTTCCATCACCAATaGTGCATGCCTCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWAFHHQ*CMPLAV
Trigger: AACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGC...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAATGGCTATCGATTCCTTaGAGGGAAGCACTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEWLSIP*REALFE
Trigger: CTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCA...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACGTCCTGCTCCTGGTTTaGTGGCTTGCTCGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINVLLLV*WLARVN
Trigger: GTTTACACGAGCAAGCCAGCAAACCAGGAGCAGGAC...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACCGAGGTCCCAAGTCCTaGTCCTGGTTTGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDRGPKS*SWFAGL
Trigger: CAAGCCAGCAAACCAGGAGCAGGACTTGGGACCTCG...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTCTCTCCTTCCCCCAGTaGTCACTGTGGGTGCGCTAC +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISLSFPQ*SLWVRY
Trigger: GTAGCGCACCCACAGTGAGCACTGGGGGAAGGAGAG...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCCACAGCCTCCGGAGTAATTATTACCAGCTCTaGCTTCCACAACTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GHKLPVFNKPTICHSLRSNYYQL*LPQLVP
Trigger: AGGCACTAGTTGTGGAAGGCAGAGCTGGTAATAATT...ACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GGCCACAAACTGCCTGTGTTCAATAAGCCCACAATCTGCCACAGCCTCCGGAGTATTGACTGCACTGAGTaGTTATTCACTATCACCACC +
Preference number: 4 (lower is better)
Translates to: GHKLPVFNKPTICHSLRSIDCTE*LFTITT
Trigger: GGTGGTGATAGTGAATAAGCACTCAGTGCAGTCAAT...ACTCCGGAGGCTGTGGCAGATTGTGGGCTTATTGAACACAGGCAGTTTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGGACGAATCAAATGTTaGGAGACCAGGGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRGRIKC*ETREGL
Trigger: TAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCC...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGGCCTGAAGTACCCGTaGACTCTTTCTCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIGLKYP*TLSQVL
Trigger: CAGCACCTGAGAAAGAGTCCACGGGTACTTCAGGCC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCAAAGAGGCAAGGTCATaGGATAAGGAGGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGKEARS*DKEVYS
Trigger: ACTGTAAACCTCCTTATCCCATGACCTTGCCTCTTT...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGAGACGAGGAACCAAGGTTCTTGAGCTCTGAGTTTGGTGGCTTCCTTGCAGTACATGAGGGTAAGTCCTaGAGTCCTCAAGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RDEEPRFLSSEFGGFLAVHEGKS*SPQELL
Trigger: AAGGAGCTCTTGAGGACTCCAGGACTTACCCTCATG...TACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGGAAATCCTCCTTGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAAGAGAATGGGAATGAGCCTTGGTaGAGATCTCAGACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: WKSSLIWETGCLVTREENGNEPW*RSQTLL
Trigger: TAGCAGAGTCTGAGATCTCCACCAAGGCTCATTCCC...ATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGGCTGGAATACAGCCTaGCTAGGCCAATTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDGWNTA*LGQFVK
Trigger: TTTGACAAATTGGCCTAGCCAGGCTGTATTCCAGCC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTATCTCCCAACAAACGTaGGCTAAGGAGGAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESISQQT*AKEEVR
Trigger: CCTTACCTCCTCCTTAGCCCACGTTTGTTGGGAGAT...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTATGAGGATCTCCTCTaGAGGGCTCACCAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIYEDLL*RAHQRL
Trigger: AAGGCGCTGGTGAGCCCTCCAGAGGAGATCCTCATA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426304.5
3UTR CAA 72 bp CACATTGGCTATCGATTCCTTGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCAGCGCCTTGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HIGYRFLAGKHC*RYEDLQRLDAS
Trigger: AGAAGCATCAAGGCGCTGGAGATCCTCATACCTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGTAGCTTCGCTAGGGTaGGCAGCGTCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIVASLG*AASFNN
Trigger: ATTGTTGAAGGACGCTGCTCACCCTAGCGAAGCTAC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCATCTAGGTCTTTCATATaGAGTAACGTTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPSRSFI*SNVASS
Trigger: GGAGCTAGCAACGTTACTTCATATGAAAGACCTAGA...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACGGACCTCTTGTGTGGTaGCTGCCATATACAGATCCT +
Preference number: 4 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINGPLVW*LPYTDP
Trigger: AGGATCTGTATATGGCAGTCACCACACAAGAGGTCC...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCCTTCCTCTTGACCTTTaGCAGCTGAGGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSILPLDL*QLRSLQ
Trigger: CTGCAGAGACCTCAGCTGTCAAAGGTCAAGAGGAAG...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGERLAST*TGKANS
Trigger: GGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAAAAGCAGGGACTGTaGGTGCTTTTTATTCCATGC +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEQKQGL*VLFIPC
Trigger: GCATGGAATAAAAAGCACTCACAGTCCCTGCTTTTG...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCTCTTCTCTCGAGACTTaGCATCAGGACAGAAACGCC +
Preference number: 4 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFSSLET*HQDRNA
Trigger: GGCGTTTCTGTCCTGATGTCAAGTCTCGAGAGAAGA...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTAAAAAGTTATCAGCAGTaGCTGGGAATGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLKSYQQ*LGMSLG
Trigger: ACCAAGGCTCATTCCCAGTCACTGCTGATAACTTTT...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACGGAGTTGCCTTAGGATaGATGATTCTCAACCACTAC +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDGVALG*MILNHY
Trigger: GTAGTGGTTGAGAATCATTCATCCTAAGGCAACTCC...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCTGTCTTTACCATGCATaGTTCCCAACAGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLCLYHA*FPTALL
Trigger: GAGCAGTGCTGTTGGGAATCATGCATGGTAAAGACA...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCCCGGGTCTCCAGTTTTaGTGGGTATATCTTTTAACT +
Preference number: 4 (lower is better)
Translates to: ESTGFSETGFHLNREGQFPGLQF*WVYLLT
Trigger: AGTTAAAAGATATACCCATCAAAACTGGAGACCCGG...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR GCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCCATATACAGATCCTaGAGATTCATGACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLAIYRS*RFMTKG
Trigger: GCCCTTTGTCATGAATCTGCAGGATCTGTATATGGC...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCAGCTTTCTTGCTGACTTaGCCTATATACCTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPAFLLT*PIYLKS
Trigger: GGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGC...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TGTCACCCATTTCTGACTGGCCGTCAATCCTATCAGGGGTCCATAAAGCTAGGACACCTATCTGTCTTGTaGCCACCATCAAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CHPFLTGRQSYQGSIKLGHLSVL*PPSREF
Trigger: GAACTCTCTTGATGGTGGGCACAAGACAGATAGGTG...TCCTAGCTTTATGGACCCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTGGATTTCCCTGGAGTTaGCTTAGGATGAATGATTCT +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALGFPWS*LRMNDS
Trigger: AGAATCATTCATCCTAAGGCAACTCCAGGGAAATCC...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATAACGATCTCAGCTCACTaGAGCCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KQFKGMALACRKCIGNEITISAH*SLCLPG
Trigger: ACCCGGGAGGCAGAGGCTGCAGTGAGCTGAGATCGT...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGAGTTCTAGGCCAATATaGCGGGTCTCCAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLSSRPI*RVSSFD
Trigger: ATCAAAACTGGAGACCCGGCATATTGGCCTAGAACT...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGCTAGCTCCCTCACTTaGCACTGTAATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIASSLT*HCNARL
Trigger: GAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp CTTGGATCTCTAGGTCTTTCATATGAAGTAACGTTGCTAGCTCCCTCACTTGGCGCTAGCTCCCTCACTTaGCACTGTAATGCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LGSLGLSYEVTLLAPSLGASSLT*HCNARL
Trigger: GAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGC...GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGAAAGACCTAGAGATCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGACCAGTTGTTCTGGCTaGTTTACACATTGGCTATCG +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRTSCSG*FTHWLS
Trigger: CGATAGCCAATGTGTAAACCAGCCAGAACAACTGGT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGACCAGTTGTTCTGGCTaGTTTACACATTGGCTATCG +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLTSCSG*FTHWLS
Trigger: CGATAGCCAATGTGTAAACCAGCCAGAACAACTGGT...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGTTTCAAGGTGAAGCTTaGAAGCTGTTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TKREESTGFSETGFHLNRFQGEA*KLFSKS
Trigger: GGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAA...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGGAGACAACAATGGGGTaGGACCCAGTGAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEETTMG*DPVKEV
Trigger: CACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTC...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTCCCAAGTCCTGCTCCTaGTTTGCTGGCTTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVPKSCS*FAGLLV
Trigger: CACGAGCAAGCCAGCAAACCAGGAGCAGGACTTGGG...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGGAAATCCTCCTTGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAAGAGAATGGCCAGGGAGGCCGTTaGTTGAAATTTAACCACAAT +
Preference number: 4 (lower is better)
Translates to: WKSSLIWETGCLVTREENGQGGR*LKFNHN
Trigger: ATTGTGGTTAAATTTCAACCAACGGCCTCCCTGGCC...ATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 72 bp AGGAACTTCCTCGAGGTCCCAAGTCCTGCTCCTGGTTaGCTGGCTTGCTCGTGTAAACCACCTTATATTATT +
Preference number: 4 (lower is better)
Translates to: RNFLEVPSPAPG*LACSCKPPYII
Trigger: AATAATATAAGGTGGTTTACACGAGCAAGCCAGCAAACCAGGAGCAGGACTTGGGACCTCGAGGAAGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGGACCTCTTGTGTGGTaGCTGCCATATACAGATCCT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIGPLVW*LPYTDP
Trigger: AGGATCTGTATATGGCAGTCACCACACAAGAGGTCC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGGATCTCCAGCGCCTTaGTGCTTCTGTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESGSPAP*CFCPTW
Trigger: CCAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCC...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTTGGCTTCTTCCTCTTaGCCTTTGACAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSILASSS*PLTAEV
Trigger: GACCTCAGCTGTCAAAGGTCAAGAGGAAGAAGCCAA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTCCATCCTCAGCAGCTaGGGCCACAACAGATTAACT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSISILSS*GHNRLT
Trigger: AGTTAATCTGTTGTGGCCTCAGCTGCTGAGGATGGA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAGACTGGCTTCCACTTaGACAGGGAAGGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQRLAST*TGKANS
Trigger: GGAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCT...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCATCTGAAGGACCAGACTaGTGGCTAGACTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSEGPD*WLDFIQ
Trigger: CTGGATGAAGTCTAGCCATCAGTCTGGTCCTTCAGA...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCATCAAGAGAGTTCTTaGGATCAAAGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPHQESS*DQSFQM
Trigger: CATTTGGAAACTTTGATCTCAAGAACTCTCTTGATG...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCATCTTCTCTCGAGACTTaGCATCAGGACAGAAACGCC +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSSLET*HQDRNA
Trigger: GGCGTTTCTGTCCTGATGTCAAGTCTCGAGAGAAGA...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACCCTCATATGATGCTATaGGGATCAATGTCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDPHMML*GSMSSA
Trigger: AGCACTTGACATTGATCCTCATAGCATCATATGAGG...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp ACTCAGGGACTGGCCTGGCTCCTTTGGGTCATTCATCAAAGCCATTTTGAAGCAATACTCCAAAGCAATTaGAAGAGTCCCTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TQGLAWLLWVIHQSHFEAILQSN*KSPFSH
Trigger: GTGGGAGAAGGGACTCTTTCAATTGCTTTGGAGTAT...TGCTTCAAAATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGAGCTTACCATATCATaGGGAAGGGCTATTAAGAGA +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLELTIS*GRAIKR
Trigger: TCTCTTAATAGCCCTTCCTCATGATATGGTAAGCTC...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCGCAGAACAGACAAAGTaGGCTTACCATATCATGAGG +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLAEQTK*AYHIMR
Trigger: CCTCATGATATGGTAAGCTCACTTTGTCTGTTCTGC...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGAAGGTTCTTGAGCTCTaGGTTTGGTGGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEKVLEL*VWWLPC
Trigger: GCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCAAAAAACATAGAGCAATaGGCTGCCCTGGACAAGAGC +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSKNIEQ*AALDKS
Trigger: GCTCTTGTCCAGGGCAGCTCATTGCTCTATGTTTTT...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGATAAGAGTTGGGTGCTaGGTGGGTGGAAGGATAGCA +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEIRVGC*VGGRIA
Trigger: TGCTATCCTTCCACCCACTCAGCACCCAACTCTTAT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAACACAATCTTCCCAGGTaGGTCAATGGCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQHNLPR*VNGCVL
Trigger: GAGCACACAGCCATTGACTCACCTGGGAAGATTGTG...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCCAGGGAAGCACTGTTTaGGGTATGAGGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIQGSTV*GMRISS
Trigger: AGAGGAGATCCTCATACCTCAAACAGTGCTTCCCTG...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426304.5
CDS-3UTR GCA 90 bp TCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCGTAATGCCAGACTCATaGCCATCAGAGGACGAATCA +
Preference number: 4 (lower is better)
Translates to: SKFGKGKQQSPICLVPTIVMPDS*PSEDES
Trigger: TGATTCGTCCTCTGATGGGCATGAGTCTGGCATTAC...GATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACTTCCATCACCAATGCTaGATGCCTCTGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINFHHQC*MPLAVS
Trigger: AGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAA...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000409720.5
CDS-3UTR GCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCGCTTTCCATCACCAATaGTGCATGCCTCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: KQQSPICLVPTIKRVLEIAFHHQ*CMPLAV
Trigger: AACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGC...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGCTTTCCATCACCAATaGTGCATGCCTCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIAFHHQ*CMPLAV
Trigger: AACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR GCA 90 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGCTCTTGTGTGGTGACTaGCATATACAGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LAKESSNHLSVLCPPSRELLCGD*HIQILQ
Trigger: CTGCAGGATCTGTATATGGCAGTCACCACACAAGAG...CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTTCTTGCTGACTTaGCCTATATACCTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLAFLLT*PIYLKS
Trigger: GGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGC...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGAGCAGGGACTGTGAGTaGTTTTTATTCCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRSRDCE*FLFHAK
Trigger: TTTTGCATGGAATAAAAAGCACTCACAGTCCCTGCT...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCTTAGCTCTGGCAACTaGAGAAAAGTTTACGAAGAA +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRLSSGN*RKVYEE
Trigger: TTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAG...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCACCTCATACCCTCCATaGACTGGATGTTCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSITSYPP*TGCSAH
Trigger: ATGAGCGGAACATCCAGTGCATGGAGGGTATGAGGT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGGTTTCTCACCTAGGGTaGTCTGTGATGACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEVSHLG*SVMTQG
Trigger: TCCCTGAGTCATCACAGAGCACCCTAGGTGAGAAAC...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGAGCGTCCTTCAACAATaGGCGAAGGAGATTATCCAA +
Preference number: 4 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWSVLQQ*AKEIIQ
Trigger: TTGGATAATCTCCTTCGCCCATTGTTGAAGGACGCT...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTTTTCAAGGTGAAGCTTaGAAGCTGTTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESFQGEA*KLFSKS
Trigger: GGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAA...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTAGGAGTATCTGGGGCTaGCTGGCTAGAGACGCTAGG +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESRSIWG*LARDAR
Trigger: CCTAGCGTCTCTAGCCAGCCAGCCCCAGATACTCCT...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTAGTGAAGGAAGTGAATTaGGTTATGAGTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLVKEVN*VMSSTA
Trigger: TGCTGTGGAACTCATAACCCAATTCACTTCCTTCAC...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAGAGACAACAATGGGGTaGGACCCAGTGAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQETTMG*DPVKEV
Trigger: CACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTC...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGAAATGCATCCAAGTTTaGCAAAGGAAAGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRKCIQV*QRKAAI
Trigger: GATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTT...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCACTGGGAATGAGCCTTaGTGGAGATCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSITGNEP*WRSQTL
Trigger: CAGAGTCTGAGATCTCCACCAAGGCTCATTCCCAGT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGCTACACCAGGCCTGTaGAAGGATTTTGGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIATPGL*KDFGLN
Trigger: GTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAGCCTCCGGAGTACCTaGGACTACAGGCGCACATCA +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLSLRST*DYRRTS
Trigger: TGATGTGCGCCTGTAGTCCCAGGTACTCCGGAGGCT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGGGAAGCTCCAGAGAATaGGCTATATTGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEGSSRE*AILLTR
Trigger: CCTGGTCAGCAATATAGCCCATTCTCTGGAGCTTCC...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ACCACCAACAGGGGCATTATGCTCCTTGCTGAATGGCCACAAACTGCCTGTGTTAGGTATGCATGGTTCTaGATGGGAATCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: TTNRGIMLLAEWPQTACVRYAWF*MGISKM
Trigger: CATCTTTGAGATTCCCATCCAGAACCATGCATACCT...AACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACACCTGTTGAAGATCTaGAACCAACAAGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPHLLKI*NQQGIA
Trigger: GGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTG...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CTTGGATCTCTAGGTCTTTCATATGAAGTAACGTTGCTAGCTCCCTCACTTGGCCACCTGTTGAAGATCTaGAACCAACAAGGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LGSLGLSYEVTLLAPSLGHLLKI*NQQGIA
Trigger: GGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTG...GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGAAAGACCTAGAGATCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR TCA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCTCTAGGTCTTTCATATaGAGTAACGTTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLSRSFI*SNVASS
Trigger: GGAGCTAGCAACGTTACTTCATATGAAAGACCTAGA...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TTCTGTCTTCAATCGATCTCGAATCAGCGTAGCCCCACTCTCCTGGTAGTCTTGTCTAGGTCTTTCATATaGAGTAACGTTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: FCLQSISNQRSPTLLVVLSRSFI*SNVASS
Trigger: GGAGCTAGCAACGTTACTTCATATGAAAGACCTAGA...CAAGACTACCAGGAGAGTGGGGCTACGCTGATTCGAGATCGATTGAAGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGATCCTGCAGATTCATaGCAAAGGGCTTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIDPADS*QRAFHH
Trigger: GTGATGGAAAGCCCTTTGTCATGAATCTGCAGGATC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCCACAACAGATTAACTaGAGAGACCCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEPQQIN*RDPLAS
Trigger: AGAAGCCAAGGGGTCTCTTCAGTTAATCTGTTGTGG...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCACAACAGATTAACTaGAGAGACCCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPPQQIN*RDPLAS
Trigger: AGAAGCCAAGGGGTCTCTTCAGTTAATCTGTTGTGG...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCCCACAACAGATTAACTaGAGAGACCCCTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIPQQIN*RDPLAS
Trigger: AGAAGCCAAGGGGTCTCTTCAGTTAATCTGTTGTGG...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACGTAGACAAGGCTTCCTaGGTGTGTGGTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDVDKAS*VCGAFL
Trigger: CAAGAAAGCACCACACACTCAGGAAGCCTTGTCTAC...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTCATCAAGAGAGTTCTTaGGATCAAAGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALHQESS*DQSFQM
Trigger: CATTTGGAAACTTTGATCTCAAGAACTCTCTTGATG...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGGAAATCCTCCTTGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAAGAGAATAGGGAGGCCGTTGGTTaGAATTTAACCACAATATTC +
Preference number: 4 (lower is better)
Translates to: WKSSLIWETGCLVTREENREAVG*NLTTIF
Trigger: GAATATTGTGGTTAAATTTCAACCAACGGCCTCCCT...ATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGTAATGCCAGACTCATaGCCATCAGAGGACGAATCA +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIVMPDS*PSEDES
Trigger: TGATTCGTCCTCTGATGGGCATGAGTCTGGCATTAC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTTCCATCACCAATGCTaGATGCCTCTGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIFHHQC*MPLAVS
Trigger: AGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000426304.5
CDS-3UTR GCA 90 bp CACTTGGACCTCTTGTGTGGTGACTGCCATATACAGATCCTGCAGATTCATGACGCCATATACAGATCCTaGAGATTCATGACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: HLDLLCGDCHIQILQIHDAIYRS*RFMTKG
Trigger: GCCCTTTGTCATGAATCTGCAGGATCTGTATATGGC...GTCATGAATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCCTCTTGTGTGGTGACTaGCATATACAGATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSILLCGD*HIQILQ
Trigger: CTGCAGGATCTGTATATGGCAGTCACCACACAAGAG...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTGGCTATCGATTCCTTaGAGGGAAGCACTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIWLSIP*REALFE
Trigger: CTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR GCA 90 bp AGAGACGAGGAACCAAGGTTCTTGAGCTCTGAGTTTGGTGGCTTCCTTGCAGTAGCTTTCTTGCTGACTTaGCCTATATACCTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RDEEPRFLSSEFGGFLAVAFLLT*PIYLKS
Trigger: GGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGC...TACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTCCTGAGTGTGTGGTaGTTTCTTGCTGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKFLSVW*FLADLP
Trigger: GGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAA...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCGGTAGTTTAACCTGTTaGCTATACTTTGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: REESTGFSETGFHLNREGGSLTC*LYFGNK
Trigger: TTTGTTTCCAAAGTATAGGCAACAGGTTAAACTACC...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTACACAAGGGGCCCCTaGTTATCTCCCAACAAACGT +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKYTRGP*LSPNKR
Trigger: ACGTTTGTTGGGAGATAAGCAGGGGCCCCTTGTGTA...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGGACGAATCAAATGTTaGGAGACCAGGGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIGRIKC*ETREGL
Trigger: TAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGGGAGACCAGTTGTTCTaGCTGGTTTACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEGDQLF*LVYTLA
Trigger: AGCCAATGTGTAAACCAGCCAGAACAACTGGTCTCC...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGGAGACCAGTTGTTCTaGCTGGTTTACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIGDQLF*LVYTLA
Trigger: AGCCAATGTGTAAACCAGCCAGAACAACTGGTCTCC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCATGCAAAAGAGAGAAGTaGGTCTCTGAGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSCKREK*VSEEYL
Trigger: CAGATACTCCTCAGAGACCCACTTCTCTCTTTTGCA...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAAAAATGCATCCAAGTTTaGCAAAGGAAAGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: LHQKRGEHGILRDWLPLEKCIQV*QRKAAI
Trigger: GATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTT...TTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCAGTCCAAATGTACCGCTaGATAAAAACGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSVQMYR*IKTSSS
Trigger: ACTGCTGCTCGTTTTTATCCAGCGGTACATTTGGAC...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGAGAACCCATAAGAGTTaGGTGCTGAGTGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKRTHKS*VLSGWK
Trigger: CTTCCACCCACTCAGCACCCAACTCTTATGGGTTCT...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCTCTTCCCTTCTCATGTaGCATCAGGCTTTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFSSLLM*HQAFSV
Trigger: GACAGAAAAAGCCTGATGCCACATGAGAAGGGAAGA...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 72 bp CAAGGCTTCCTGAGTGTGTGGTGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTCCATGGTAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: QGFLSVWCFLAD*PYIPKVHGRNL
Trigger: CAGGTTTCTACCATGGACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CAA 72 bp GTAGGGGTTAGGCAAACAGGCCAGGGAGGCCGTTGGTaGAAATTTAACCACAATATTCTCGGTCTCTATTGT +
Preference number: 4 (lower is better)
Translates to: VGVRQTGQGGRW*KFNHNILGLYC
Trigger: ACAATAGAGACCGAGAATATTGTGGTTAAATTTCAACCAACGGCCTCCCTGGCCTGTTTGCCTAACCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGTCATGCCACACCTGTTaGAGATCTGAAACCAACAAG +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGESCHTC*RSETNK
Trigger: CTTGTTGGTTTCAGATCTTCAACAGGTGTGGCATGA...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCAAGCTTCTTTCAAGGTaGAGCTTGGAAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIKLLSR*SLEAVL
Trigger: GAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTGTAGACAAGGCTTCCTaGGTGTGTGGTGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVVDKAS*VCGAFL
Trigger: CAAGAAAGCACCACACACTCAGGAAGCCTTGTCTAC...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCAAGTTTACGAAGAATCTaGAGGACCAGACTGATGGCT +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSLRRI*RTRLMA
Trigger: AGCCATCAGTCTGGTCCTTCAGATTCTTCGTAAACT...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TCAAATTATATACTTATTGACTGCACTGAGTGCTTATTCACTATCACCACCAACCAAGAGCTCCTTCCTTaGAGAGCCCCTGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNYILIDCTECLFTITTNQELLP*RAPGEQ
Trigger: CTGCTCCCCAGGGGCTCTTCAAGGAAGGAGCTCTTG...GTTGGTGGTGATAGTGAATAAGCACTCAGTGCAGTCAATAAGTATATAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCATCACCAATGCTGCATaGCTCTGGCAGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIITNAA*LWQFLY
Trigger: ATAGAGAAACTGCCAGAGGCATGCAGCATTGGTGAT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000426304.5
CDS-3UTR GCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGCCATATACAGATCCTaGAGATTCATGACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIAIYRS*RFMTKG
Trigger: GCCCTTTGTCATGAATCTGCAGGATCTGTATATGGC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR GCA 90 bp CAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCAGGTAGTTTAACCTGTTaGCTATACTTTGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: QNLHQKRGEHGILRDWLPGSLTC*LYFGNK
Trigger: TTTGTTTCCAAAGTATAGGCAACAGGTTAAACTACC...TGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCAGTTTGGTGGCTTCCTTaGAGTATGTCACTTATTCCT +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSVWWLP*SMSLIP
Trigger: AGGAATAAGTGACATACTGCAAGGAAGCCACCAAAC...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GATGGGATGAAAGATCAAGAAAGATGGACTTCTAGATGTTCAAATAGAGAAGGAGAGTCAATGGCTGTGTaGTCCCCACACCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: DGMKDQERWTSRCSNREGESMAV*SPHPGA
Trigger: AGCTCCAGGGTGTGGGGAGCACACAGCCATTGACTC...TCCTTCTCTATTTGAACATCTAGAAGTCCATCTTTCTTGATCTTTCATCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAGCGTCCTTCAACAATaGGCGAAGGAGATTATCCAA +
Preference number: 4 (lower is better)
Translates to: KQQSPICLVPTIKRVLEISVLQQ*AKEIIQ
Trigger: TTGGATAATCTCCTTCGCCCATTGTTGAAGGACGCT...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTGGAATTTTCTTCAAATaGTTCTGTCTTCAATCGATC +
Preference number: 4 (lower is better)
Translates to: GRPIPCGPVNINFSSLALGIFFK*FCLQSI
Trigger: GATCGATTGAAGACAGAACCATTTGAAGAAAATTCC...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCACCAGTTGTTCTGGCTaGTTTACACATTGGCTATCG +
Preference number: 4 (lower is better)
Translates to: KQQSPICLVPTIKRVLEITSCSG*FTHWLS
Trigger: CGATAGCCAATGTGTAAACCAGCCAGAACAACTGGT...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCACCAGTTGTTCTGGCTaGTTTACACATTGGCTATCG +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSITSCSG*FTHWLS
Trigger: CGATAGCCAATGTGTAAACCAGCCAGAACAACTGGT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACGGAGACCAGTTGTTCTaGCTGGTTTACACATTGGCT +
Preference number: 4 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDGDQLF*LVYTLA
Trigger: AGCCAATGTGTAAACCAGCCAGAACAACTGGTCTCC...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTTTCAAGGTGAAGCTTaGAAGCTGTTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIFQGEA*KLFSKS
Trigger: GGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTGGGATTCTCAGAGACTaGCTTCCACTTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVGILRD*LPLEQG
Trigger: TCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCC...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTGGCTTCCTGAGTGTGTaGTGCTTTCTTGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISGFLSV*CFLADL
Trigger: CAAGTCAGCAAGAAAGCACCACACACTCAGGAAGCC...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAGTATCTGGGGCTGGCTaGCTAGAGACGCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEVSGAG*LETLGK
Trigger: TTTCCCTAGCGTCTCTAGCCAGCCAGCCCCAGATAC...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCGTGAAGGAAGTGAATTaGGTTATGAGTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SKFGKGKQQSPICLVPTIVKEVN*VMSSTA
Trigger: TGCTGTGGAACTCATAACCCAATTCACTTCCTTCAC...GATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGTCTGGGCTTAAATTCTaGCTGTCACTTATTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWSGLKF*LSLISC
Trigger: ACAGCTAATAAGTGACAGCCAGAATTTAAGCCCAGA...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCAGGAATCAGGGAAAGATaGAGACTAGAAGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSGIRER*RLEAFF
Trigger: GAAGAAAGCTTCTAGTCTCCATCTTTCCCTGATTCC...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 72 bp GACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATaGGGTTATGAGTTCCACAGCATAAGTAATCCCAAA +
Preference number: 4 (lower is better)
Translates to: DNNGVGPSEGSE*GYEFHSISNPK
Trigger: TTTGGGATTACTTATGCTGTGGAACTCATAACCCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CAA 72 bp CTTCTCAATAACTTTACTATCCCTTGGAAATCCTCCTaGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LLNNFTIPWKSS*IWETGCLVTRE
Trigger: TTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCAAGGGATAGTAAAGTTATTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 72 bp TATTCACTATCACCACCAACAGGGGCATTATGCTCCTaGCTGAATGGCCACAAACTGCCTGTGTTCAATAAG +
Preference number: 4 (lower is better)
Translates to: YSLSPPTGALCS*LNGHKLPVFNK
Trigger: CTTATTGAACACAGGCAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCCTGTTGGTGGTGATAGTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 72 bp AGTCTTGGATCTCTAGGTCTTTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGCACTGTAATGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SLGSLGLSYEVT*LAPSLGTVMPD
Trigger: GTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGAAAGACCTAGAGATCCAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR TCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTCTAGGTCTTTCATATaGAGTAACGTTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSISRSFI*SNVASS
Trigger: GGAGCTAGCAACGTTACTTCATATGAAAGACCTAGA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR TCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATAGGACCTCTTGTGTGGTaGCTGCCATATACAGATCCT +
Preference number: 4 (lower is better)
Translates to: KQFKGMALACRKCIGNEIGPLVW*LPYTDP
Trigger: AGGATCTGTATATGGCAGTCACCACACAAGAGGTCC...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp ACTCAGGGACTGGCCTGGCTCCTTTGGGTCATTCATCAAAGCCATTTTGAAGCACATCAAGAGAGTTCTTaGGATCAAAGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: TQGLAWLLWVIHQSHFEAHQESS*DQSFQM
Trigger: CATTTGGAAACTTTGATCTCAAGAACTCTCTTGATG...TGCTTCAAAATGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGTCCCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTTCTTCTCTCGAGACTTaGCATCAGGACAGAAACGCC +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESSSLET*HQDRNA
Trigger: GGCGTTTCTGTCCTGATGTCAAGTCTCGAGAGAAGA...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp AAGCAATTCAAGGGAATGGCACTGGCTTGTAGGAAATGTATTGGGAATGAGATAGAGTATCAAGAGATGTaGGCATCTCTCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KQFKGMALACRKCIGNEIEYQEM*ASLLPP
Trigger: TGGGGGAAGGAGAGATGCTCACATCTCTTGATACTC...TATCTCATTCCCAATACATTTCCTACAAGCCAGTGCCATTCCCTTGAATTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTAGGGAAAAGCCAGGATaGAGTGCCAGTCAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISREKPG*SASQKD
Trigger: ATCCTTTTGACTGGCACTTCATCCTGGCTTTTCCCT...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAATCACCAATGCTGCATaGCTCTGGCAGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQITNAA*LWQFLY
Trigger: ATAGAGAAACTGCCAGAGGCATGCAGCATTGGTGAT...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000409720.5
CDS-3UTR GCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGCTTTCCATCACCAATaGTGCATGCCTCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESAFHHQ*CMPLAV
Trigger: AACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGC...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAGGGTTTCGCCATGTTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLRVSPC*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGGCAACATGGCGAAACCCT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGGAATTTTCTTCAAATaGTTCTGTCTTCAATCGATC +
Preference number: 4 (lower is better)
Translates to: EPTEPPPKERRARDSQRLGIFFK*FCLQSI
Trigger: GATCGATTGAAGACAGAACCATTTGAAGAAAATTCC...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCAAAATGCATCCAAGTTTaGCAAAGGAAAGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSKCIQV*QRKAAI
Trigger: GATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTT...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTCCTGTGGAAGGATTTTaGTCTCAACAGGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISPVEGF*SQQARL
Trigger: GAGTCTAGCCTGTTGAGACCAAAATCCTTCCACAGG...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
3UTR CAA 72 bp AGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTaGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAG +
Preference number: 4 (lower is better)
Translates to: SLAKESSNHLSV*CPPSREFLRSK
Trigger: CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
3UTR CAA 72 bp ATGGATATTAGTAACAGAGACGAGGAACCAAGGTTCTaGAGCTCTGAGTTTGGTGGCTTCCTTGCAGTATGT +
Preference number: 4 (lower is better)
Translates to: MDISNRDEEPRF*SSEFGGFLAVC
Trigger: ACATACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCTGTTACTAATATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAATCTAGGTCTTTCATATaGAGTAACGTTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQSRSFI*SNVASS
Trigger: GGAGCTAGCAACGTTACTTCATATGAAAGACCTAGA...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp GATGGGATGAAAGATCAAGAAAGATGGACTTCTAGATGTTCAAATAGAGAAGGACAGGGAAGCACTGTTTaGGGTATGAGGATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DGMKDQERWTSRCSNREGQGSTV*GMRISS
Trigger: GCTGGAGATCCTCATACCTCAAACAGTGCTTCCCTG...TCCTTCTCTATTTGAACATCTAGAAGTCCATCTTTCTTGATCTTTCATCCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTCAAAAGCAGGGACTGTaGGTGCTTTTTATTCCATGC +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVQKQGL*VLFIPC
Trigger: GCATGGAATAAAAAGCACTCACAGTCCCTGCTTTTG...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTAGTTTACGAAGAATCTaGAGGACCAGACTGATGGCT +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISSLRRI*RTRLMA
Trigger: AGCCATCAGTCTGGTCCTTCAGATTCTTCGTAAACT...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTAGGTGGAGTTTGCAGTaGGCCAAAATTGTGCGATTG +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESRWSLQ*AKIVRL
Trigger: CAATCGCACAATTTTGGCTCACTGCAAACTCCACCT...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGCTCTATTGTTTTGAGTaGGGCCCAATATTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKLYCFE*GPIFPQ
Trigger: CTGTGGAAATATTGGGCCTCACTCAAAACAATAGAG...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCATCATCAAAGCCATTTTaGAGCAAGGACTGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPSSKPF*SKDCLV
Trigger: TACTAAGCAGTCCTTGCTTCAAAATGGCTTTGATGA...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGTTCCATCACCAATGCTaGATGCCTCTGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLFHHQC*MPLAVS
Trigger: AGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAA...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000409720.5
CDS-3UTR GCA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAGCAGGGACTGTGAGTaGTTTTTATTCCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: KQQSPICLVPTIKRVLEISRDCE*FLFHAK
Trigger: TTTTGCATGGAATAAAAAGCACTCACAGTCCCTGCT...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGTTTAGGTCAAGTTCCTaGAGGAACTTCCTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLFRSSS*RNFLEV
Trigger: GACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAA...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTTTTCAAGGTGAAGCTTaGAAGCTGTTCTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVFQGEA*KLFSKS
Trigger: GGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAA...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGCCAATTCCCTGTaGGCCTGTCAACATCAACTT +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLKANSL*ACQHQL
Trigger: AAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTTGCAAAAGAGAGAAGTaGGTCTCTGAGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVCKREK*VSEEYL
Trigger: CAGATACTCCTCAGAGACCCACTTCTCTCTTTTGCA...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp GATGGGATGAAAGATCAAGAAAGATGGACTTCTAGATGTTCAAATAGAGAAGGACTGCTCCTGGTTTGCTaGCTTGCTCGTGTAAACCAC +
Preference number: 4 (lower is better)
Translates to: DGMKDQERWTSRCSNREGLLLVC*LARVNH
Trigger: GTGGTTTACACGAGCAAGCCAGCAAACCAGGAGCAG...TCCTTCTCTATTTGAACATCTAGAAGTCCATCTTTCTTGATCTTTCATCCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGGCCTTGCAATCTAGGTaGCGCTATTTCTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKALQSR*RYFSTF
Trigger: AAAAGTAGAGAAATAGCGCCACCTAGATTGCAAGGC...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TCAAATTATATACTTATTGACTGCACTGAGTGCTTATTCACTATCACCACCAACTGCTCCTTTAACTACTaGCCCTTGGCCCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SNYILIDCTECLFTITTNCSFNY*PLAQQD
Trigger: GTCCTGCTGGGCCAAGGGCCAGTAGTTAAAGGAGCA...GTTGGTGGTGATAGTGAATAAGCACTCAGTGCAGTCAATAAGTATATAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGCTTCTTTCAAGGTaGAGCTTGGAAGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: FPNGDLALATAEKFTKNLKLLSR*SLEAVL
Trigger: GAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR TCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAAATAGCTCCTGGCTGTaGGAACCTAAGAGGTATGCA +
Preference number: 4 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFENSSWL*EPKRYA
Trigger: TGCATACCTCTTAGGTTCTCACAGCCAGGAGCTATT...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACCTTAGCTCTGGCAACTaGAGAAAAGTTTACGAAGAA +
Preference number: 4 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDLSSGN*RKVYEE
Trigger: TTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAG...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR GCA 90 bp AGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGCTTAGCTCTGGCAACTaGAGAAAAGTTTACGAAGAA +
Preference number: 4 (lower is better)
Translates to: SNHLSVLCPPSREFLRSKLSSGN*RKVYEE
Trigger: TTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAG...CTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTGTGAAGGAAGTGAATTaGGTTATGAGTTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISVKEVN*VMSSTA
Trigger: TGCTGTGGAACTCATAACCCAATTCACTTCCTTCAC...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp GATGGGATGAAAGATCAAGAAAGATGGACTTCTAGATGTTCAAATAGAGAAGGAGAGCAGACATCCTATTaGAAAGAGGCAAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: DGMKDQERWTSRCSNREGEQTSY*KEARSW
Trigger: CCATGACCTTGCCTCTTTTCAATAGGATGTCTGCTC...TCCTTCTCTATTTGAACATCTAGAAGTCCATCTTTCTTGATCTTTCATCCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAATCACCAATGCTGCATaGCTCTGGCAGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEITNAA*LWQFLY
Trigger: ATAGAGAAACTGCCAGAGGCATGCAGCATTGGTGAT...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000409720.5
CDS-3UTR CCA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGGGAATTTTCTTCAAATaGTTCTGTCTTCAATCGATC +
Preference number: 4 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGEGIFFK*FCLQSI
Trigger: GATCGATTGAAGACAGAACCATTTGAAGAAAATTCC...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGGAATTTTCTTCAAATaGTTCTGTCTTCAATCGATC +
Preference number: 4 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIGIFFK*FCLQSI
Trigger: GATCGATTGAAGACAGAACCATTTGAAGAAAATTCC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CCA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAATGCAAAAGAGAGAAGTaGGTCTCTGAGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFECKREK*VSEEYL
Trigger: CAGATACTCCTCAGAGACCCACTTCTCTCTTTTGCA...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAGATAGCAAAATCTGTTaGGCTCCAAATAGAGAAACT +
Preference number: 4 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQDSKIC*APNRET
Trigger: AGTTTCTCTATTTGGAGCCCAACAGATTTTGCTATC...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR TCA 90 bp CACTCAAGTAGGGCCATCAGTATCACCTTCAAATGTCATCACACCGTTATTAGTCAGGATTATAGGATCTaGTTAACCATGTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: HSSRAISITFKCHHTVISQDYRI*LTMLDN
Trigger: GTTGTCTAACATGGTTAATCAGATCCTATAATCCTG...ACTAATAACGGTGTGATGACATTTGAAGGTGATACTGATGGCCCTACTTGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR GCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTAGCAGGGACTGTGAGTaGTTTTTATTCCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESSRDCE*FLFHAK
Trigger: TTTTGCATGGAATAAAAAGCACTCACAGTCCCTGCT...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CCA 90 bp TCAAATTATATACTTATTGACTGCACTGAGTGCTTATTCACTATCACCACCAACTGGGTGCTGAGTGGGTaGAAGGATAGCAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: SNYILIDCTECLFTITTNWVLSG*KDSKIC
Trigger: ACAGATTTTGCTATCCTTCCACCCACTCAGCACCCA...GTTGGTGGTGATAGTGAATAAGCACTCAGTGCAGTCAATAAGTATATAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTAATGCTGCATGCCTCTaGCAGTTTCATGATAAAAAG +
Preference number: 4 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESNAACL*QFHDKK
Trigger: CTTTTTATCATGAAACTGCCAGAGGCATGCAGCATT...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR GCA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTTTTCCATTTTCCATGTaGCTTGTAGATACTGAAATC +
Preference number: 4 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVFPFSM*LVDTEI
Trigger: GATTTCAGTATCTACAAGGCACATGGAAAATGGAAA...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CCA 90 bp TCAAATTATATACTTATTGACTGCACTGAGTGCTTATTCACTATCACCACCAACTTTACAGTGGGAGACTaGAAAGAAGAACCTAATGTC +
Preference number: 4 (lower is better)
Translates to: SNYILIDCTECLFTITTNFTVGD*KEEPNV
Trigger: GACATTAGGTTCTTCTTTCCAGTCTCCCACTGTAAA...GTTGGTGGTGATAGTGAATAAGCACTCAGTGCAGTCAATAAGTATATAATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS GCA 90 bp GCGGCCGCGAGAGCGCCCACTCTCTTAGCCGCACGCACGCTTTCCTaGCCGCTCGCGCAAACCGAAAGGCCTAGAGTAAGAGGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: AAARAPTLLAARTLS*PLAQTERPRVRGRF
Trigger: AAAGCGGCCTCTTACTCTAGGCCTTTCGGTTTGCGCGAGCGGGCAGGAAAGCGTGCGTGCGGCTAAGAGAGTGGGCGCTCTCGCGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000450447.1
CDS GCA 90 bp TTGGCCAAGAGGGAGTTCTCTGCAAGCTGTAGCCACGCCCATGGCTaGATCAACAGGCCTTGCTCCAGTTCTTCCATCGTCAGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LAKREFSASCSHAHG*INRPCSSSSIVSGR
Trigger: GCGGCCGCTGACGATGGAAGAACTGGAGCAAGGCCTGTTGATGCAGCCATGGGCGTGGCTACAGCTTGCAGAGAACTCCCTCTTGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000450447.1
CDS-3UTR CAA 90 bp TGCTCACTGTGGGTGCGCTACACCAGGCCTGTGGAAGGATTTTGGTCTCAACAGGGAGCAGTGAGCCGCTaGTTCAGCTCCTTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: CSLWVRYTRPVEGFWSQQGAVSR*FSSLAR
Trigger: GCGAGCCAAGGAGCTGAACAAGCGGCTCACTGCTCC...CTGTTGAGACCAAAATCCTTCCACAGGCCTGGTGTAGCGCACCCACAGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCGGAGCAGTGAGCCGCTaGTTCAGCTCCTTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: REESTGFSETGFHLNREGGAVSR*FSSLAR
Trigger: GCGAGCCAAGGAGCTGAACAAGCGGCTCACTGCTCC...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTGGAGCAGTGAGCCGCTaGTTCAGCTCCTTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: SLWACQHQLQFSRPYRRPGAVSR*FSSLAR
Trigger: GCGAGCCAAGGAGCTGAACAAGCGGCTCACTGCTCC...AGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCCCACTACCCCTAGCTTaGCGGGGTAAGGGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: TEPPPKERRARDSQRLASPLPLA*RGKGFG
Trigger: CCCGAAGCCCTTACCCCGCAAAGCTAGGGGTAGTGG...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS GCA 90 bp TTGGCCAAGAGGGAGTTCTCTGCAAGCTGTAGCCACGCCCATGGCTaGATCAACAGGCCTTGCTCCAGTTCTTCCATCTTCACTCGAGCC +
Preference number: 5 (lower is better)
Translates to: LAKREFSASCSHAHG*INRPCSSSSIFTRA
Trigger: GGCTCGAGTGAAGATGGAAGAACTGGAGCAAGGCCTGTTGATGCAGCCATGGGCGTGGCTACAGCTTGCAGAGAACTCCCTCTTGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457600.2
CDS-3UTR CAA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCGCTTGTTCAGCTCCTaGGCTCGCTGGCTGACCACA +
Preference number: 5 (lower is better)
Translates to: GEHGILRDWLPLEQGRPIRLFSS*ARWLTT
Trigger: TGTGGTCAGCCAGCGAGCCAAGGAGCTGAACAAGCG...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCGAGACTGGCTTCCACTaGAACAGGGAAGGCCAATTC +
Preference number: 5 (lower is better)
Translates to: REESTGFSETGFHLNREGETGFH*NREGQF
Trigger: GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTC...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS GCA 90 bp CTTCAACAATGGGCGAAGGAGATTATCCAAATGACAGAGGAAAGCTaGAGGAGGAGCAGTGAGCCGCTTGTTCAGCTCCTTGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LQQWAKEIIQMTEES*RRSSEPLVQLLGSL
Trigger: CAGCGAGCCAAGGAGCTGAACAAGCGGCTCACTGCTCCTCCTGCAGCTTTCCTCTGTCATTTGGATAATCTCCTTCGCCCATTGTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
ENST00000457600.2
CDS-3UTR CAA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: GRPIPCGPVNINFSSLALAGKHC*RYEDLQ
Trigger: CTGGAGATCCTCATACCTCAAACAGTGCTTCCCTGC...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp GGAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTGAGACTGGCTTCCACTaGAACAGGGAAGGCCAATTC +
Preference number: 5 (lower is better)
Translates to: GRPIPCGPVNINFSSLALETGFH*NREGQF
Trigger: GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTC...AAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTTCAAGAGCTCCTTCCTaGAAGAGCCCCTGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESSRAPS*KSPWGA
Trigger: TGCTCCCCAGGGGCTCTTCAAGGAAGGAGCTCTTGA...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCAGTCCTGCTCCTGGTTaGCTGGCTTGCTCGTGTAAA +
Preference number: 5 (lower is better)
Translates to: ESTGFSETGFHLNREGQFSPAPG*LACSCK
Trigger: TTTACACGAGCAAGCCAGCAAACCAGGAGCAGGACT...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp ACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCGGGGCATTATGCTCCTaGCTGAATGGCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: TEPPPKERRARDSQRLASGALCS*LNGHKL
Trigger: CAGTTTGTGGCCATTCAGCAAGGAGCATAATGCCCC...GGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCAGGACGAATCAAATGTaGGGAGACCAGGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: ESTGFSETGFHLNREGQFRTNQM*GDQGRT
Trigger: AGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCT...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp ACGTTGCTAGCTCCCTCACTTGGCACTGTAATGCCAGACTCATGCCCATCAGAGAGGACGAATCAAATGTaGGGAGACCAGGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: TLLAPSLGTVMPDSCPSERTNQM*GDQGRT
Trigger: AGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCT...CTCTGATGGGCATGAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGCAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR CAA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGGCCAAAATTGTGCGATaGTACTCCAGCCTAGGCAAC +
Preference number: 5 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRAKIVR*YSSLGN
Trigger: GTTGCCTAGGCTGGAGTACAATCGCACAATTTTGGC...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGCCTTGGAAATCCTCCTaGATCTGGGAGACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWPWKSS*IWETGC
Trigger: GCAGCCAGTCTCCCAGATCAAGGAGGATTTCCAAGG...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCCTCCTCCCGCCAGCTTaGTACAGAGTACACAAGGGG +
Preference number: 5 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFLLPPA*YRVHKG
Trigger: CCCCTTGTGTACTCTGTACAAAGCTGGCGGGAGGAG...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTGTATCACCAACAGCACTGCTCTaGATCCCTGAGTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: CQHQLQFSRPYRRPLTVSPTALL*IPEWRP
Trigger: GGGTCTCCACTCAGGGATCAAGAGCAGTGCTGTTGG...TGATACAGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGCAGGGTTTCGCCATGTaGCCTAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWQGFAM*PRLVSN
Trigger: GTTTGAGACCAGCCTAGGCAACATGGCGAAACCCTG...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGGGCTCACCAGCGCCTaGATGCTTCTGTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIGLTSA*MLLSHL
Trigger: CAAGTGGGACAGAAGCATCAAGGCGCTGGTGAGCCC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426304.5
CDS-3UTR CAA 90 bp GAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGAGGACGAATCAAATGTaGGGAGACCAGGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: EPTEPPPKERRARDSQRLRTNQM*GDQGRT
Trigger: AGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCT...CAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: ESTGFSETGFHLNREGQFSYEVT*LAPSLG
Trigger: GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGA...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp ACGTTGCTAGCTCCCTCACTTGGCACTGTAATGCCAGACTCATGCCCATCAGAGTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: TLLAPSLGTVMPDSCPSESYEVT*LAPSLG
Trigger: GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGA...CTCTGATGGGCATGAGTCTGGCATTACAGTGCCAAGTGAGGGAGCTAGCAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR CAA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACAGGATCTCCAGCGCCTaGATGCTTCTGTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINRISSA*MLLSHL
Trigger: CAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCCT...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TGTCACCCATTTCTGACTGGCCGTCAATCCTATCAGGGGTCCATAAAGCTAGGAGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: CHPFLTGRQSYQGSIKLGAGKHC*RYEDLQ
Trigger: CTGGAGATCCTCATACCTCAAACAGTGCTTCCCTGC...TCCTAGCTTTATGGACCCCTGATAGGATTGACGGCCAGTCAGAAATGGGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTACAGGAGGCCTCTGACTTGGCTGGTTTACACATaGGCTATCGATTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: WACQHQLQFSRPYRRPLTWLVYT*AIDSLQ
Trigger: CTGCAAGGAATCGATAGCCAATGTGTAAACCAGCCA...AGTCAGAGGCCTCCTGTAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp ACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGAGGCAGGAGAATCACTaGAACACAGGAGGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: TKREESTGFSETGFHLNRRQENH*NTGGGV
Trigger: AACTCCACCTCCTGTGTTCAAGTGATTCTCCTGCCT...CCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCTGGAGACAGCAACCTTaGGGGATGATGGGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: KQQSPICLVPTIKRVLEIWRQQP*GMMGAV
Trigger: CACTGCCCCCATCATCCCCAAAGGTTGCTGTCTCCA...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AGAGACGAGGAACCAAGGTTCTTGAGCTCTGAGTTTGGTGGCTTCCTTGCAGTAGAGGAACCAAGGTTCTaGAGCTCTGAGTTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: RDEEPRFLSSEFGGFLAVEEPRF*SSEFGG
Trigger: GCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTC...TACTGCAAGGAAGCCACCAAACTCAGAGCTCAAGAACCTTGGTTCCTCGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS GCA 90 bp AGCGCCTTGATGCTTCTGTCCCACTTGGACCTCTTGTGTGGTGACTaGCATATACAGATCCTGCAGATTCATGACAAAGGGCTTTCCATC +
Preference number: 5 (lower is better)
Translates to: SALMLLSHLDLLCGD*HIQILQIHDKGLSI
Trigger: GATGGAAAGCCCTTTGTCATGAATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTGGGACAGAAGCATCAAGGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
ENST00000426304.5
ENST00000483627.1
ENST00000491159.5
ENST00000494211.5
CDS-3UTR CAA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCTTGGTGATAAAAACCTaGGCCAAGAGGGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ESTGFSETGFHLNREGQFLVIKT*AKREFS
Trigger: AGAGAACTCCCTCTTGGCCAAGGTTTTTATCACCAA...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGAGGACGAATCAAATGTaGGGAGACCAGGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWRTNQM*GDQGRT
Trigger: AGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCT...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp CACTTGGACCTCTTGTGTGGTGACTGCCATATACAGATCCTGCAGATTCATGACATGCTTCTGTCCCACTaGGACCTCTTGTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: HLDLLCGDCHIQILQIHDMLLSH*DLLCGD
Trigger: GTCACCACACAAGAGGTCCAAGTGGGACAGAAGCAT...GTCATGAATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR CAA 90 bp CACTTGGACCTCTTGTGTGGTGACTGCCATATACAGATCCTGCAGATTCATGACGAGACTGGCTTCCACTaGAACAGGGAAGGCCAATTC +
Preference number: 5 (lower is better)
Translates to: HLDLLCGDCHIQILQIHDETGFH*NREGQF
Trigger: GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTC...GTCATGAATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418099.5
CDS-3UTR CAA 90 bp GAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTCAGTGAAGGAAGTGAATaGGGTTATGAGTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: ESTGFSETGFHLNREGQFSEGSE*GYEFHS
Trigger: GCTGTGGAACTCATAACCCAATTCACTTCCTTCACT...GAATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACAATCACCTATCTGTCTaGTGCCCACCATCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDNHLSV*CPPSRE
Trigger: CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATT...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS TCA 90 bp GACCACACTAGTGTCCACCTGTTCATGCCACACCTGTTGAAGATCTaGAACCAACAAGGCATAGCCCTGCTTGGTGATAAAAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: DHTSVHLFMPHLLKI*NQQGIALLGDKNLG
Trigger: GCCAAGGTTTTTATCACCAAGCAGGGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTGTGGCATGAACAGGTGGACACTAGTGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
ENST00000457600.2
CDS-3UTR CAA 90 bp ATGCCCATCAGAGGACGAATCAAATGTTGGGAGACCAGGGAAGGACTAGCTAGCTTGGTGATAAAAACCTaGGCCAAGAGGGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: MPIRGRIKCWETREGLASLVIKT*AKREFS
Trigger: AGAGAACTCCCTCTTGGCCAAGGTTTTTATCACCAA...GCTAGCTAGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCTCTGATGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR CAA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWSYEVT*LAPSLG
Trigger: GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGA...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCATGCTTCTGTCCCACTaGGACCTCTTGTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIMLLSH*DLLCGD
Trigger: GTCACCACACAAGAGGTCCAAGTGGGACAGAAGCAT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CAA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: KQQSPICLVPTIKRVLEIAGKHC*RYEDLQ
Trigger: CTGGAGATCCTCATACCTCAAACAGTGCTTCCCTGC...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp GGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCCAATTTGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: GEHGILRDWLPLEQGRPICFLAD*PYIPKV
Trigger: GACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCA...AATTGGCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TTTGAGGGATTCACAGGCCTCTGGCCCCGCTGTGATGAAAAATGTCTTGAGTCTGTGTGTGGTGCTTTCTaGCTGACTTGCCCTATATAC +
Preference number: 5 (lower is better)
Translates to: FEGFTGLWPRCDEKCLESVCGAF*LTCPIY
Trigger: GTATATAGGGCAAGTCAGCAAGAAAGCACCACACAC...AGACTCAAGACATTTTTCATCACAGCGGGGCCAGAGGCCTGTGAATCCCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGCGTGATGAAAAATGTCTaGAGTCTGTGCTGTTACAGT +
Preference number: 5 (lower is better)
Translates to: REESTGFSETGFHLNREGVMKNV*SLCCYS
Trigger: ACTGTAACAGCACAGACTCAAGACATTTTTCATCAC...GCCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCTC +
Preference number: 5 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIAGKHC*RYEDLL
Trigger: GAGGAGATCCTCATACCTCAAACAGTGCTTCCCTGC...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426304.5
CDS TCA 90 bp CCCGTAGAATCAGTGCATCTGTTCATGCCACACCTGTTGAAGATCTaGAACCAACAAGGCATAGCCCTGCTTGGTGATAAAAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: PVESVHLFMPHLLKI*NQQGIALLGDKNLG
Trigger: GCCAAGGTTTTTATCACCAAGCAGGGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTGTGGCATGAACAGATGCACTGATTCTACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS-3UTR CAA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCAGGACGAATCAAATGTaGGGAGACCAGGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIRTNQM*GDQGRT
Trigger: AGTCCTTCCCTGGTCTCCCAACATTTGATTCGTCCT...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CAA 90 bp ATCTGTTCATATAGGGTAGGGGTGGAGCAACAGCAGAGAACACTTCAGGGTTTCTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: ICSYRVGVEQQQRTLQGFSYEVT*LAPSLG
Trigger: GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGA...GAAACCCTGAAGTGTTCTCTGCTGTTGCTCCACCCCTACCCTATATGAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACATGCTTCTGTCCCACTaGGACCTCTTGTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDMLLSH*DLLCGD
Trigger: GTCACCACACAAGAGGTCCAAGTGGGACAGAAGCAT...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp CTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGCACGGGATTCTCAGAGACTGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: LNLQNLHQKRGEHGILRDCFLAD*PYIPKV
Trigger: GACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCA...GTCTCTGAGAATCCCGTGCTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACGGAGCAGACATCCTATaGAAAAGAGGCAAGGTCATG +
Preference number: 5 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINGADIL*KRGKVM
Trigger: CATGACCTTGCCTCTTTTCAATAGGATGTCTGCTCC...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp GAAGGCCAATTCCCTGTGGGCCTGTCAACATCAACTTCAGTTCTCTCGCCCTTAAATACTCCAAAGCAATaGAAAGAGTCCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: EGQFPVGLSTSTSVLSPLNTPKQ*KESLLP
Trigger: TGGGAGAAGGGACTCTTTCAATTGCTTTGGAGTATT...TAAGGGCGAGAGAACTGAAGTTGATGTTGACAGGCCCACAGGGAATTGGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TGGAAATCCTCCTTGATCTGGGAGACTGGCTGCCTGGTGACAAGAGAAGAGAATAGAGTGATGAAGCCTTaGCTAGAATACTTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: WKSSLIWETGCLVTREENRVMKP*LEYLGA
Trigger: AGCACCCAAGTATTCTAGCAAAGGCTTCATCACTCT...ATTCTCTTCTCTTGTCACCAGGCAGCCAGTCTCCCAGATCAAGGAGGATTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TACTTTTTAGGTCAAGTTCCTGCAGGAACTTCCTCGAGGTCCCAAGTCCTGCTCCAGGCTTTTTCTGTCTaGAGTAAGGGCTGTCTTTAC +
Preference number: 5 (lower is better)
Translates to: YFLGQVPAGTSSRSQVLLQAFSV*SKGCLY
Trigger: GTAAAGACAGCCCTTACTCAAGACAGAAAAAGCCTG...GAGCAGGACTTGGGACCTCGAGGAAGTTCCTGCAGGAACTTGACCTAAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp AAGAGAGGAGAGCACGGGATTCTCAGAGACTGGCTTCCACTTGAACAGGGAAGGTTCATCAAAGCCATTTaGAAGCAAGGACTGCTTAGT +
Preference number: 5 (lower is better)
Translates to: KRGEHGILRDWLPLEQGRFIKAI*KQGLLS
Trigger: ACTAAGCAGTCCTTGCTTCAAAATGGCTTTGATGAA...CCTTCCCTGTTCAAGTGGAAGCCAGTCTCTGAGAATCCCGTGCTCTCCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAACTGGCCTGGCTCCTTaGGGTCATTCATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQTGLAP*GHSSKP
Trigger: TGGCTTTGATGAATGACCCAAAGGAGCCAGGCCAGT...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACTTGGTGATAAAAACCTaGGCCAAGAGGGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINLVIKT*AKREFS
Trigger: AGAGAACTCCCTCTTGGCCAAGGTTTTTATCACCAA...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTCATATGAAGTAACGTaGCTAGCTCCCTCACTTGGC +
Preference number: 5 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSISYEVT*LAPSLG
Trigger: GCCAAGTGAGGGAGCTAGCAACGTTACTTCATATGA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CAA 90 bp GTTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTAGGATCTCCAGCGCCTaGATGCTTCTGTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: VSKWRLSSGNCRKVYEESRISSA*MLLSHL
Trigger: CAAGTGGGACAGAAGCATCAAGGCGCTGGAGATCCT...AGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp ATGCATCCAAGTTTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCATGGCTGGTTTACACATaGGCTATCGATTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: MHPSLAKESSNHLSVLCPWLVYT*AIDSLQ
Trigger: CTGCAAGGAATCGATAGCCAATGTGTAAACCAGCCA...TGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAAACTTGGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TGCCATGTAAGCTTCTTTCAAGGTGAAGCTTGGAAGCTGTTCTCCAAGTCCATCTGGCTGGTTTACACATaGGCTATCGATTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: CHVSFFQGEAWKLFSKSIWLVYT*AIDSLQ
Trigger: CTGCAAGGAATCGATAGCCAATGTGTAAACCAGCCA...GATGGACTTGGAGAACAGCTTCCAAGCTTCACCTTGAAAGAAGCTTACATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000426304.5
CDS-3UTR CAA 90 bp AAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCGTGTGTGGTGCTTTCTaGCTGACTTGCCCTATATAC +
Preference number: 5 (lower is better)
Translates to: KQQSPICLVPTIKRVLEIVCGAF*LTCPIY
Trigger: GTATATAGGGCAAGTCAGCAAGAAAGCACCACACAC...GATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp AAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAGAGAGGAGAGAGATCTTCTGAGGCCTaGGCCAAGAACACAAGGAAA +
Preference number: 5 (lower is better)
Translates to: KVHGRNLNLQNLHQKRGERSSEA*AKNTRK
Trigger: TTTCCTTGTGTTCTTGGCCAAGGCCTCAGAAGATCT...CTCTCCTCTCTTTTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGATGCTTCTGTCCCACTaGGACCTCTTGTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: FPNGDLALATAEKFTKNLMLLSH*DLLCGD
Trigger: GTCACCACACAAGAGGTCCAAGTGGGACAGAAGCAT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp AGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAAGGACCAGACAATCACCTATCTGTCTaGTGCCCACCATCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: RLSSGNCRKVYEESEGPDNHLSV*CPPSRE
Trigger: CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATT...GTCTGGTCCTTCAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp AGACTTCATCCAGAGACAACAATGGGGTGGGACCCAGTGAAGGAAGTGAATTGGAAAATGCATCCAAGTTaGGCAAAGGAAAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: RLHPETTMGWDPVKEVNWKMHPS*AKESSN
Trigger: ATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTTT...CCAATTCACTTCCTTCACTGGGTCCCACCCCATTGTTGTCTCTGGATGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TGTGTGCCTTTAGTCCCAGTTATGCAGAAGGATGAGGCGGGAGGATTGATAAACTCGGTCTCTATTGTTTaGAGTGAGGCCCAATATTTC +
Preference number: 5 (lower is better)
Translates to: CVPLVPVMQKDEAGGLINSVSIV*SEAQYF
Trigger: GAAATATTGGGCCTCACTCAAAACAATAGAGACCGA...GTTTATCAATCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp CAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGTTCTTGAGATCAAAGTTTGGCTGGTTTACACATaGGCTATCGATTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QSPICLVPTIKRVLEIKVWLVYT*AIDSLQ
Trigger: CTGCAAGGAATCGATAGCCAATGTGTAAACCAGCCA...AACTTTGATCTCAAGAACTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TTGGCAAAGGAAAGCAGCAATCACCTATCTGTCTTGTGCCCACCATCAAGAGAGAAAATGCATCCAAGTTaGGCAAAGGAAAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: LAKESSNHLSVLCPPSREKMHPS*AKESSN
Trigger: ATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTTT...CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATTGCTGCTTTCCTTTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGGTGTGTGGTGCTTTCTaGCTGACTTGCCCTATATAC +
Preference number: 5 (lower is better)
Translates to: FPNGDLALATAEKFTKNLVCGAF*LTCPIY
Trigger: GTATATAGGGCAAGTCAGCAAGAAAGCACCACACAC...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAACAGGGAGGCCGTTGGTaGAAATTTAACCACAATATT +
Preference number: 5 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQQGGRW*KFNHNI
Trigger: AATATTGTGGTTAAATTTCAACCAACGGCCTCCCTG...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAGAGAATGGGCTATATaGCTGACCAGGAAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: FPNGDLALATAEKFTKNLREWAI*LTRKGD
Trigger: ATCTCCCTTCCTGGTCAGCAATATAGCCCATTCTCT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS CCA 90 bp CCTCTAGAATTATATGAAAATGTTATGTGTACACGCATATATGCATaGGGAGGGGGAAGAGGTCTACAGCTATCATCAAACTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: PLELYENVMCTRIYA*GGGRGLQLSSNSQG
Trigger: TCCCTGAGAGTTTGATGATAGCTGTAGACCTCTTCCCCCTCCCCATGCATATATGCGTGTACACATAACATTTTCATATAATTCTAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481764.1
CDS-3UTR CAA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGAGTGAAGGAAGTGAATaGGGTTATGAGTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: FPNGDLALATAEKFTKNLSEGSE*GYEFHS
Trigger: GCTGTGGAACTCATAACCCAATTCACTTCCTTCACT...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAAATCACCTATCTGTCTaGTGCCCACCATCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFENHLSV*CPPSRE
Trigger: CTCTCTTGATGGTGGGCACAAGACAGATAGGTGATT...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp CCCTATATACCTAAAGTCCATGGTAGAAACCTGAACCTACAGAACCTCCACCAAAAAATGCATCCAAGTTaGGCAAAGGAAAGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: PYIPKVHGRNLNLQNLHQKMHPS*AKESSN
Trigger: ATTGCTGCTTTCCTTTGCCAAACTTGGATGCATTTT...TTGGTGGAGGTTCTGTAGGTTCAGGTTTCTACCATGGACTTTAGGTATATAGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAATTGGTGATAAAAACCTaGGCCAAGAGGGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFELVIKT*AKREFS
Trigger: AGAGAACTCCCTCTTGGCCAAGGTTTTTATCACCAA...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TTTCCAAATGGAGACTTAGCTCTGGCAACTGCAGAAAAGTTTACGAAGAATCTGTGCTTTCTTGCTGACTaGCCCTATATACCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: FPNGDLALATAEKFTKNLCFLAD*PYIPKV
Trigger: GACTTTAGGTATATAGGGCAAGTCAGCAAGAAAGCA...CAGATTCTTCGTAAACTTTTCTGCAGTTGCCAGAGCTAAGTCTCCATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
CDS-3UTR CAA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAAGTTTGGTGGCTTCCTaGCAGTATGTCACTTATTCC +
Preference number: 5 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFESLVAS*QYVTYS
Trigger: GGAATAAGTGACATACTGCAAGGAAGCCACCAAACT...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp GATGGGATGAAAGATCAAGAAAGATGGACTTCTAGATGTTCAAATAGAGAAGGAAGTGAAGGAAGTGAATaGGGTTATGAGTTCCACAGC +
Preference number: 5 (lower is better)
Translates to: DGMKDQERWTSRCSNREGSEGSE*GYEFHS
Trigger: GCTGTGGAACTCATAACCCAATTCACTTCCTTCACT...TCCTTCTCTATTTGAACATCTAGAAGTCCATCTTTCTTGATCTTTCATCCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAATTTTACCTACAATTTaGAGGGATTCACAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEILPTI*RDSQAS
Trigger: AGAGGCCTGTGAATCCCTCAAAATTGTAGGTAAAAT...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS-3UTR CAA 90 bp TCTCGAGACTTGACATCAGGACAGAAACGCCAGTATATATACAGGATATTTGAAGGCTTAAACCTCATGTaGATTAAACCTCATGGTGTT +
Preference number: 5 (lower is better)
Translates to: SRDLTSGQKRQYIYRIFEGLNLM*IKPHGV
Trigger: AACACCATGAGGTTTAATCAACATGAGGTTTAAGCC...TTCAAATATCCTGTATATATACTGGCGTTTCTGTCCTGATGTCAAGTCTCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356853.10
CDS GCA 72 bp AGCTGTAGCCACGCCCATGGCTGCATCAACAGGCCTTaGTCCAGTTCTTCCATCGTCAGCGGCCGCGAGAGC +
Preference number: 6 (lower is better)
Translates to: SCSHAHGCINRP*SSSSIVSGRES
Trigger: GCTCTCGCGGCCGCTGACGATGGAAGAACTGGAGCAAGGCCTGTTGATGCAGCCATGGGCGTGGCTACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356853.10
ENST00000418099.5
ENST00000450447.1
CDS GCA 72 bp AGAGCGCCCACTCTCTTAGCCGCACGCACGCTTTCCTaGCCGCTCGCGCAAACCGAAAGGCCTAGAGTAAGA +
Preference number: 6 (lower is better)
Translates to: RAPTLLAARTLS*PLAQTERPRVR
Trigger: TCTTACTCTAGGCCTTTCGGTTTGCGCGAGCGGGCAGGAAAGCGTGCGTGCGGCTAAGAGAGTGGGCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356853.10
ENST00000450447.1
CDS CAA 72 bp CCCTCCTCTTTCCAGCCGGCCACCACACAAGGGATCTaGTCTTGTGGTCCCTGCGATCCTTTCATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: PSSFQPATTQGI*SCGPCDPFIWA
Trigger: AGCCCAGATGAAAGGATCGCAGGGACCACAAGACAAGATCCCTTGTGTGGTGGCCGGCTGGAAAGAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483627.1
ENST00000491159.5
CDS CAA 90 bp ACACTCACTCCCTCCTCTTTCCAGCCGGCCACCACACAAGGGATCTaGTCTTGTGGTCCCTGCGATCCTTTCATCTGGGCTCCAAACCCA +
Preference number: 6 (lower is better)
Translates to: TLTPSSFQPATTQGI*SCGPCDPFIWAPNP
Trigger: TGGGTTTGGAGCCCAGATGAAAGGATCGCAGGGACCACAAGACAAGATCCCTTGTGTGGTGGCCGGCTGGAAAGAGGAGGGAGTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483627.1
ENST00000491159.5
CDS GCA 72 bp AGCTGTAGCCACGCCCATGGCTGCATCAACAGGCCTTaGTCCAGTTCTTCCATCTTCACTCGAGCCCTACCA +
Preference number: 6 (lower is better)
Translates to: SCSHAHGCINRP*SSSSIFTRALP
Trigger: TGGTAGGGCTCGAGTGAAGATGGAAGAACTGGAGCAAGGCCTGTTGATGCAGCCATGGGCGTGGCTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457600.2
CDS CCA 72 bp TTTCCAGCCGGCCACCACACAAGGGATCTTGTCTTGTaGTCCCTGCGATCCTTTCATCTGGGCTCCAAACCC +
Preference number: 6 (lower is better)
Translates to: FPAGHHTRDLVL*SLRSFHLGSKP
Trigger: GGGTTTGGAGCCCAGATGAAAGGATCGCAGGGACCACAAGACAAGATCCCTTGTGTGGTGGCCGGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483627.1
ENST00000491159.5
CDS CAA 72 bp GGTATGAGGATCTCCTCTGGAGGGCTCACCAGCGCCTaGATGCTTCTGTCCCACTTGGACCTCTTGTGTGGT +
Preference number: 6 (lower is better)
Translates to: GMRISSGGLTSA*MLLSHLDLLCG
Trigger: ACCACACAAGAGGTCCAAGTGGGACAGAAGCATCAAGGCGCTGGTGAGCCCTCCAGAGGAGATCCTCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426304.5
ENST00000491159.5
CDS TCA 72 bp TTCATCTGGGCTCCAAACCCACTGTCACCTTGGCCCTaGATCACTCCCCAGGAGACACTGGGAAAACAGAGC +
Preference number: 6 (lower is better)
Translates to: FIWAPNPLSPWP*ITPQETLGKQS
Trigger: GCTCTGTTTTCCCAGTGTCTCCTGGGGAGTGATTCAGGGCCAAGGTGACAGTGGGTTTGGAGCCCAGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483627.1
ENST00000491159.5
CDS CAA 72 bp CTCTTTCCAGCCGGCCACCACACAAGGGATCTTGTCTaGTGGTCCCTGCGATCCTTTCATCTGGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: LFPAGHHTRDLV*WSLRSFHLGSK
Trigger: TTTGGAGCCCAGATGAAAGGATCGCAGGGACCACAAGACAAGATCCCTTGTGTGGTGGCCGGCTGGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483627.1
ENST00000491159.5
CDS CAA 90 bp ATCTCCTCTGGAGGGCTCACCAGCGCCTTGATGCTTCTGTCCCACTaGGACCTCTTGTGTGGTGACTGCCATATACAGATCCTGCAGATT +
Preference number: 6 (lower is better)
Translates to: ISSGGLTSALMLLSH*DLLCGDCHIQILQI
Trigger: AATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTGGGACAGAAGCATCAAGGCGCTGGTGAGCCCTCCAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426304.5
ENST00000491159.5
CDS TCA 72 bp GCCACACAATCACAGGAGAAGGTAGCTTCGCTAGGGTaGGCAGCGTCCTTCAACAATGGGCGAAGGAGATTA +
Preference number: 6 (lower is better)
Translates to: ATQSQEKVASLG*AASFNNGRRRL
Trigger: TAATCTCCTTCGCCCATTGTTGAAGGACGCTGCTCACCCTAGCGAAGCTACCTTCTCCTGTGATTGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
ENST00000457600.2
CDS TCA 72 bp ACATTGGCTATCGATTCCTTGCAGGGAAGCACTGTTTaGGGTATGAGGATCTCCTCTGGAGGGCTCACCAGC +
Preference number: 6 (lower is better)
Translates to: TLAIDSLQGSTV*GMRISSGGLTS
Trigger: GCTGGTGAGCCCTCCAGAGGAGATCCTCATACCTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426304.5
ENST00000491159.5
CDS GCA 72 bp CTTCCACTTAACTCATCCTCCACATTCCCACTCCAGTaGACTGCCACCAATGACAACATGCCCAGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LPLNSSSTFPLQ*TATNDNMPSLE
Trigger: TTCCAGGCTGGGCATGTTGTCATTGGTGGCAGTGCACTGGAGTGGGAATGTGGAGGATGAGTTAAGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481764.1
CDS CAA 72 bp CACATTGGCTATCGATTCCTTGCAGGGAAGCACTGTTaGAGGTATGAGGATCTCCTCTGGAGGGCTCACCAG +
Preference number: 6 (lower is better)
Translates to: HIGYRFLAGKHC*RYEDLLWRAHQ
Trigger: CTGGTGAGCCCTCCAGAGGAGATCCTCATACCTCAAACAGTGCTTCCCTGCAAGGAATCGATAGCCAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426304.5
ENST00000491159.5
CDS CAA 90 bp GGAGGGCTCACCAGCGCCTTGATGCTTCTGTCCCACTTGGACCTCTaGTGTGGTGACTGCCATATACAGATCCTGCAGATTCATGACAAA +
Preference number: 6 (lower is better)
Translates to: GGLTSALMLLSHLDL*CGDCHIQILQIHDK
Trigger: TTTGTCATGAATCTGCAGGATCTGTATATGGCAGTCACCACACAAGAGGTCCAAGTGGGACAGAAGCATCAAGGCGCTGGTGAGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426304.5
ENST00000491159.5
CDS CCA 72 bp GGTAGCTTCGCTAGGGTGAGCAGCGTCCTTCAACAATaGGCGAAGGAGATTATCCAAATGACAGAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: GSFARVSSVLQQ*AKEIIQMTEES
Trigger: GCTTTCCTCTGTCATTTGGATAATCTCCTTCGCCCATTGTTGAAGGACGCTGCTCACCCTAGCGAAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
ENST00000457600.2
CDS TCA 72 bp AGTGTCCACCTGTTCATGCCACACCTGTTGAAGATCTaGAACCAACAAGGCATAGCCCTGCTTGGTGATAAA +
Preference number: 6 (lower is better)
Translates to: SVHLFMPHLLKI*NQQGIALLGDK
Trigger: TTTATCACCAAGCAGGGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTGTGGCATGAACAGGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000418099.5
ENST00000457600.2
CDS GCA 72 bp ATTCATGACAAAGGGCTTTCCATCACCAATGCTGCATaGCTCTGGCAGTTTCACAGCACACTCCTTCTTAAG +
Preference number: 6 (lower is better)
Translates to: IHDKGLSITNAA*LWQFHSTLLLK
Trigger: CTTAAGAAGGAGTGTGCTGTGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGCCCTTTGTCATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494211.5
CDS CAA 72 bp AGGCTTAACCTAGTAGACAATCAGAACTACGGCTGCTaGACAGAGAATGTGATTGTTTTTCCGTCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: RLNLVDNQNYGC*TENVIVFPSAA
Trigger: GGCCGCTGACGGAAAAACAATCACATTCTCTGTCAAGCAGCCGTAGTTCTGATTGTCTACTAGGTTAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481764.1
CDS TCA 72 bp TCAGTGCATCTGTTCATGCCACACCTGTTGAAGATCTaGAACCAACAAGGCATAGCCCTGCTTGGTGATAAA +
Preference number: 6 (lower is better)
Translates to: SVHLFMPHLLKI*NQQGIALLGDK
Trigger: TTTATCACCAAGCAGGGCTATGCCTTGTTGGTTTCAGATCTTCAACAGGTGTGGCATGAACAGATGCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450447.1
CDS GCA 72 bp ATTCATGACAAAGGGCTTTCCATCACCAATGCTGCATaGCTCTGGCAGTTTCATGATAAAAAGAGACCGATG +
Preference number: 6 (lower is better)
Translates to: IHDKGLSITNAA*LWQFHDKKRPM
Trigger: CATCGGTCTCTTTTTATCATGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGCCCTTTGTCATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418099.5
ENST00000483627.1
CDS GCA 72 bp AGTAGGCTTAACCTAGTAGACAATCAGAACTACGGCTaGTTGACAGAGAATGTGATTGTTTTTCCGTCAGCG +
Preference number: 6 (lower is better)
Translates to: SRLNLVDNQNYG*LTENVIVFPSA
Trigger: CGCTGACGGAAAAACAATCACATTCTCTGTCAAGCAGCCGTAGTTCTGATTGTCTACTAGGTTAAGCCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481764.1
CDS CAA 72 bp TGTAGAGTTCTAGGCCAATATGCCGGGTCTCCAGTTTaGATGGGTATATCTTTTAACTCCACACACACTCAC +
Preference number: 6 (lower is better)
Translates to: CRVLGQYAGSPV*MGISFNSTHTH
Trigger: GTGAGTGTGTGTGGAGTTAAAAGATATACCCATCAAAACTGGAGACCCGGCATATTGGCCTAGAACTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483627.1
CDS GCA 72 bp ATTCATGACAAAGGGCTTTCCATCACCAATGCTGCATaGCTCTGGCAGTTTCTCTATCATAAATTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: IHDKGLSITNAA*LWQFLYHKLFQ
Trigger: TTGGAACAATTTATGATAGAGAAACTGCCAGAGGCATGCAGCATTGGTGATGGAAAGCCCTTTGTCATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356853.10
ENST00000409720.5
ENST00000426304.5
ENST00000457600.2
CDS CAA 72 bp TGTAGAGTTCTAGGCCAATATGCCGGGTCTCCAGTTTaGATGGGTATATCTTTTAACTCTATCATAAATTGT +
Preference number: 6 (lower is better)
Translates to: CRVLGQYAGSPV*MGISFNSIINC
Trigger: ACAATTTATGATAGAGTTAAAAGATATACCCATCAAAACTGGAGACCCGGCATATTGGCCTAGAACTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418099.5