RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NHEG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000225391

Ensembl transcript IDs: ENST00000418699.1, ENST00000432330.5

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTGCCTCCAGCCTCACATCTGCATTCCCACCCACCTCGCCTGCGCTaGTCCGCAGACGCGCGCGGGGAAAGGCACGCGCGATGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LPPASHLHSHPPRLR*SADARGERHARCFP
Trigger: GGGAAAGCATCGCGCGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGTGGGTGGGAATGCAGATGTGAGGCTGGAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS GCA 90 bp CTCTACTGCCTCCAGCCTCACATCTGCATTCCCACCCACCTCGCCTaGGCTGATCCGCAGACGCGCGCGGGGAAAGGCACGCGCGATGCT +
Preference number: 5 (lower is better)
Translates to: LYCLQPHICIPTHLA*ADPQTRAGKGTRDA
Trigger: AGCATCGCGCGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGTGGGTGGGAATGCAGATGTGAGGCTGGAGGCAGTAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS TCA 90 bp TGGCTCTACTGCCTCCAGCCTCACATCTGCATTCCTCGCCTGCGCTaGTCCGCAGACGCGCGCGGGGAAAGGCACGCGCGATGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: WLYCLQPHICIPRLR*SADARGERHARCFP
Trigger: GGGAAAGCATCGCGCGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGAATGCAGATGTGAGGCTGGAGGCAGTAGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418699.1
CDS GCA 90 bp CGAGATGGCTCTACTGCCTCCAGCCTCACATCTGCATTCCTCGCCTaGGCTGATCCGCAGACGCGCGCGGGGAAAGGCACGCGCGATGCT +
Preference number: 5 (lower is better)
Translates to: RDGSTASSLTSAFLA*ADPQTRAGKGTRDA
Trigger: AGCATCGCGCGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGAATGCAGATGTGAGGCTGGAGGCAGTAGAGCCATCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418699.1
CDS CCA 90 bp AGGCACGCGCGATGCTTTCCCACTCGCTCAGCGGGCGCCGCTCACTaGAAACTCGCTCCGGATTCCGAACCCGAGAGCAGAGCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: RHARCFPTRSAGAAH*KLAPDSEPESRAEG
Trigger: TCCCTCTGCTCTGCTCTCGGGTTCGGAATCCGGAGCGAGTTTCCAGTGAGCGGCGCCCGCTGAGCGAGTGGGAAAGCATCGCGCGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 90 bp TGCTGCATGATTGCGAGATGGCTCTACTGCCTCCAGCCTCACATCTaGATTCCCACCCACCTCGCCTGCGCTGATCCGCAGACGCGCGCG +
Preference number: 5 (lower is better)
Translates to: CCMIARWLYCLQPHI*IPTHLACADPQTRA
Trigger: CGCGCGCGTCTGCGGATCAGCGCAGGCGAGGTGGGTGGGAATGCAGATGTGAGGCTGGAGGCAGTAGAGCCATCTCGCAATCATGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS GCA 90 bp CAGCTCTGCCTTGCTTGTTGCTGCATGATTGCGAGATGGCTCTACTaGCTCCAGCCTCACATCTGCATTCCCACCCACCTCGCCTGCGCT +
Preference number: 5 (lower is better)
Translates to: QLCLACCCMIARWLY*LQPHICIPTHLACA
Trigger: AGCGCAGGCGAGGTGGGTGGGAATGCAGATGTGAGGCTGGAGGCAGTAGAGCCATCTCGCAATCATGCAGCAACAAGCAAGGCAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS GCA 90 bp AACCTGCAAATACTGGTTGGGGGACGACATCACACTGAGGGAGGGTaGTGTGGGCAAAAGGGATCTCATATGCTGTGGGTGGAGCACAAA +
Preference number: 5 (lower is better)
Translates to: NLQILVGGRHHTEGG*CGQKGSHMLWVEHK
Trigger: TTTGTGCTCCACCCACAGCATATGAGATCCCTTTTGCCCACAGCACCCTCCCTCAGTGTGATGTCGTCCCCCAACCAGTATTTGCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 90 bp CGATGTTATCAGTCAACAACATGCCAGCTCTGCCTTGCTTGTTGCTaGATGATTGCGAGATGGCTCTACTGCCTCCAGCCTCACATCTGC +
Preference number: 5 (lower is better)
Translates to: RCYQSTTCQLCLACC*MIARWLYCLQPHIC
Trigger: GCAGATGTGAGGCTGGAGGCAGTAGAGCCATCTCGCAATCATGCAGCAACAAGCAAGGCAGAGCTGGCATGTTGTTGACTGATAACATCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CCA 90 bp TTAATTCGGAGGCGTTGCCTTCCATTCTTCCCAGTTCCACATGGCTaGGGAGACCTCAGAATCATGGCAGGAGGCGAAAGACACTTCTTA +
Preference number: 5 (lower is better)
Translates to: LIRRRCLPFFPVPHG*GDLRIMAGGERHFL
Trigger: TAAGAAGTGTCTTTCGCCTCCTGCCATGATTCTGAGGTCTCCCCAGCCATGTGGAACTGGGAAGAATGGAAGGCAACGCCTCCGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CCA 90 bp CACACTGAGGGAGGGTGCTGTGGGCAAAAGGGATCTCATATGCTGTaGGTGGAGCACAAACAGCAAGTTGTGAGAACAGCTAAAGCTAAC +
Preference number: 5 (lower is better)
Translates to: HTEGGCCGQKGSHML*VEHKQQVVRTAKAN
Trigger: GTTAGCTTTAGCTGTTCTCACAACTTGCTGTTTGTGCTCCACCCACAGCATATGAGATCCCTTTTGCCCACAGCACCCTCCCTCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 90 bp AATATAGCAGCTTCTCGATGTTATCAGTCAACAACATGCCAGCTCTaGCTTGCTTGTTGCTGCATGATTGCGAGATGGCTCTACTGCCTC +
Preference number: 5 (lower is better)
Translates to: NIAASRCYQSTTCQL*LACCCMIARWLYCL
Trigger: GAGGCAGTAGAGCCATCTCGCAATCATGCAGCAACAAGCAAGGCAGAGCTGGCATGTTGTTGACTGATAACATCGAGAAGCTGCTATATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CCA 90 bp AACCAAAAGAGTTTATGTTCCCAATATACCAAGAAGTTCAGAGATTaGCAGTCCAGGATTAATATAGCAGCTTCTCGATGTTATCAGTCA +
Preference number: 5 (lower is better)
Translates to: NQKSLCSQYTKKFRD*QSRINIAASRCYQS
Trigger: TGACTGATAACATCGAGAAGCTGCTATATTAATCCTGGACTGCCAATCTCTGAACTTCTTGGTATATTGGGAACATAAACTCTTTTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS TCA 72 bp GCCTCACATCTGCATTCCCACCCACCTCGCCTGCGCTaGTCCGCAGACGCGCGCGGGGAAAGGCACGCGCGA +
Preference number: 6 (lower is better)
Translates to: ASHLHSHPPRLR*SADARGERHAR
Trigger: TCGCGCGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGTGGGTGGGAATGCAGATGTGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS TCA 72 bp TGCCTCCAGCCTCACATCTGCATTCCTCGCCTGCGCTaGTCCGCAGACGCGCGCGGGGAAAGGCACGCGCGA +
Preference number: 6 (lower is better)
Translates to: CLQPHICIPRLR*SADARGERHAR
Trigger: TCGCGCGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGAATGCAGATGTGAGGCTGGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418699.1
CDS GCA 72 bp CTCCAGCCTCACATCTGCATTCCCACCCACCTCGCCTaGGCTGATCCGCAGACGCGCGCGGGGAAAGGCACG +
Preference number: 6 (lower is better)
Translates to: LQPHICIPTHLA*ADPQTRAGKGT
Trigger: CGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGTGGGTGGGAATGCAGATGTGAGGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS GCA 72 bp TCTACTGCCTCCAGCCTCACATCTGCATTCCTCGCCTaGGCTGATCCGCAGACGCGCGCGGGGAAAGGCACG +
Preference number: 6 (lower is better)
Translates to: STASSLTSAFLA*ADPQTRAGKGT
Trigger: CGTGCCTTTCCCCGCGCGCGTCTGCGGATCAGCGCAGGCGAGGAATGCAGATGTGAGGCTGGAGGCAGTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418699.1
CDS CCA 72 bp CGATGCTTTCCCACTCGCTCAGCGGGCGCCGCTCACTaGAAACTCGCTCCGGATTCCGAACCCGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: RCFPTRSAGAAH*KLAPDSEPESR
Trigger: TCTGCTCTCGGGTTCGGAATCCGGAGCGAGTTTCCAGTGAGCGGCGCCCGCTGAGCGAGTGGGAAAGCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CAA 90 bp TCGCTCCGGATTCCGAACCCGAGAGCAGAGCAGAGGGAAGCCCCTTaGCTGAGCAGCTCCTTAGTGGAGGGCAATGAACGCGCTGAAATC +
Preference number: 6 (lower is better)
Translates to: SLRIPNPRAEQREAP*LSSSLVEGNERAEI
Trigger: GATTTCAGCGCGTTCATTGCCCTCCACTAAGGAGCTGCTCAGCAAAGGGGCTTCCCTCTGCTCTGCTCTCGGGTTCGGAATCCGGAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CAA 72 bp ATTCCGAACCCGAGAGCAGAGCAGAGGGAAGCCCCTTaGCTGAGCAGCTCCTTAGTGGAGGGCAATGAACGC +
Preference number: 6 (lower is better)
Translates to: IPNPRAEQREAP*LSSSLVEGNER
Trigger: GCGTTCATTGCCCTCCACTAAGGAGCTGCTCAGCAAAGGGGCTTCCCTCTGCTCTGCTCTCGGGTTCGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 72 bp ATACTGGTTGGGGGACGACATCACACTGAGGGAGGGTaGTGTGGGCAAAAGGGATCTCATATGCTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: ILVGGRHHTEGG*CGQKGSHMLWV
Trigger: CACCCACAGCATATGAGATCCCTTTTGCCCACAGCACCCTCCCTCAGTGTGATGTCGTCCCCCAACCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 72 bp CTTGCTTGTTGCTGCATGATTGCGAGATGGCTCTACTaGCTCCAGCCTCACATCTGCATTCCCACCCACCTC +
Preference number: 6 (lower is better)
Translates to: LACCCMIARWLY*LQPHICIPTHL
Trigger: GAGGTGGGTGGGAATGCAGATGTGAGGCTGGAGGCAGTAGAGCCATCTCGCAATCATGCAGCAACAAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432330.5
CDS CCA 72 bp AGGCGTTGCCTTCCATTCTTCCCAGTTCCACATGGCTaGGGAGACCTCAGAATCATGGCAGGAGGCGAAAGA +
Preference number: 6 (lower is better)
Translates to: RRCLPFFPVPHG*GDLRIMAGGER
Trigger: TCTTTCGCCTCCTGCCATGATTCTGAGGTCTCCCCAGCCATGTGGAACTGGGAAGAATGGAAGGCAACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 72 bp CAGTCAACAACATGCCAGCTCTGCCTTGCTTGTTGCTaGATGATTGCGAGATGGCTCTACTGCCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: QSTTCQLCLACC*MIARWLYCLQP
Trigger: AGGCTGGAGGCAGTAGAGCCATCTCGCAATCATGCAGCAACAAGCAAGGCAGAGCTGGCATGTTGTTGACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CCA 72 bp GGAGGGTGCTGTGGGCAAAAGGGATCTCATATGCTGTaGGTGGAGCACAAACAGCAAGTTGTGAGAACAGCT +
Preference number: 6 (lower is better)
Translates to: GGCCGQKGSHML*VEHKQQVVRTA
Trigger: AGCTGTTCTCACAACTTGCTGTTTGTGCTCCACCCACAGCATATGAGATCCCTTTTGCCCACAGCACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 72 bp GCTTCTCGATGTTATCAGTCAACAACATGCCAGCTCTaGCTTGCTTGTTGCTGCATGATTGCGAGATGGCTC +
Preference number: 6 (lower is better)
Translates to: ASRCYQSTTCQL*LACCCMIARWL
Trigger: GAGCCATCTCGCAATCATGCAGCAACAAGCAAGGCAGAGCTGGCATGTTGTTGACTGATAACATCGAGAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 72 bp TCGATGTTATCAGTCAACAACATGCCAGCTCTGCCTTaGTTGTTGCTGCATGATTGCGAGATGGCTCTACTG +
Preference number: 6 (lower is better)
Translates to: SMLSVNNMPALP*LLLHDCEMALL
Trigger: CAGTAGAGCCATCTCGCAATCATGCAGCAACAAGCAAGGCAGAGCTGGCATGTTGTTGACTGATAACATCGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS GCA 72 bp CCCAGAGCCTTCTCTGTCAAAGACATGCCAAGTTTGTaGATTCTCAGATCAGTTCTGGGCTTTCCTGAAATT +
Preference number: 6 (lower is better)
Translates to: PRAFSVKDMPSL*ILRSVLGFPEI
Trigger: AATTTCAGGAAAGCCCAGAACTGATCTGAGAATGCACAAACTTGGCATGTCTTTGACAGAGAAGGCTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CAA 72 bp AATCCCAGAGCCTTCTCTGTCAAAGACATGCCAAGTTaGTGCATTCTCAGATCAGTTCTGGGCTTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: NPRAFSVKDMPS*CILRSVLGFPE
Trigger: TTCAGGAAAGCCCAGAACTGATCTGAGAATGCACAAACTTGGCATGTCTTTGACAGAGAAGGCTCTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5
CDS CAA 90 bp GCTAAAGCTAACTTAGGTAAAGGGGTATTTCAATCTAGATTGCATTaGGCTGCATGTAGTAGAAATCTGACGCAGTGCCTAACCAAAAGA +
Preference number: 6 (lower is better)
Translates to: AKANLGKGVFQSRLH*AACSRNLTQCLTKR
Trigger: TCTTTTGGTTAGGCACTGCGTCAGATTTCTACTACATGCAGCCAAATGCAATCTAGATTGAAATACCCCTTTACCTAAGTTAGCTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418699.1
ENST00000432330.5