Pregenerated sensors for NGDN (Homo sapiens)
Ensembl gene IDs: ENSG00000129460Ensembl transcript IDs: ENST00000397154.7, ENST00000408901.8, ENST00000553336.5, ENST00000553439.5, ENST00000555128.5, ENST00000556022.3, ENST00000556103.1, ENST00000556378.5, ENST00000556483.5, ENST00000556580.4, ENST00000556699.1, ENST00000556953.1
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAGGTTCTATCTTGCTTTTGATTACAGCCAAGCTCAAGTTTCTTaGACCACTTATGCCACCTGGTGGCCAGCCCAGATAACACTAATA | + |
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Preference number: 1 (lower is better) Translates to: ERFYLAFDYSQAQVS*TTYATWWPAQITLI Trigger: TATTAGTGTTATCTGGGCTGGCCACCAGGTGGCATAAGTGGTTCAAGAAACTTGAGCTTGGCTGTAATCAAAAGCAAGATAGAACCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR CCA 90 bp | ATATCTCAATCTGTATTGTATTATAACAAATCATACAGGAAGTTGTaGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: ISQSVLYYNKSYRKL*QHGLKELIIPASSL Trigger: GAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATACAGATTGAGATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGTCCCTCCAAACTCTGAAAGCCTATCAATGTCCCAGCTGACCCCATCTCCTAGCCATTTCAGAGTGTaGCTCACTGTCCCACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: KVPPNSESLSMSQLTPSPSHFRV*LTVPPA Trigger: AGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCT...AGGAGATGGGGTCAGCTGGGACATTGATAGGCTTTCAGAGTTTGGAGGGACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| 3UTR-3UTR TCA 90 bp | AATGACAGAGCCATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCCCCTCAGTGGTCAGTaGGAGAAGCCAATACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: NDRAISECDSLSHLLTTPPLSGQ*EKPILS Trigger: ACTGAGTATTGGCTTCTCTCACTGACCACTGAGGGG...AGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCTCTGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| 3UTR-3UTR CCA 90 bp | CAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCAAGGGCTCACAGGGGTaGGGTCTCCTAGGCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: QIIQEVVATWVERVDYTSKGSQG*GLLGST Trigger: GGTACTGCCTAGGAGACCCCACCCCTGTGAGCCCTT...GCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR CAA 90 bp | CACCTAAGGAGATTATTGCCCAGTATGGAAGAGATACTACAGGGCTaGGTGAGACCCAGAATGGCAAATCCAAAGAGACTCAATTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: HLRRLLPSMEEILQG*VRPRMANPKRLNLY Trigger: GTACAAATTGAGTCTCTTTGGATTTGCCATTCTGGGTCTCACCAAGCCCTGTAGTATCTCTTCCATACTGGGCAATAATCTCCTTAGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR CCA 90 bp | CAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTCCTGAACAGGAGCTGTaGGACCTTAGAGGCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: QHGLKELIIPASSLNTFCPEQEL*DLRGRI Trigger: GATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGG...ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR TCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTAAAGGGAAACCAAGAATaGGGCAAAGGACAGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ATWWPAQITLIKPKIHVLKGNQE*GKGQLE Trigger: TTCCAACTGTCCTTTGCCTCATTCTTGGTTTCCCTT...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR TCA 90 bp | GTATTGTATTATAACAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGCTATTTAGGGAAGCCTaGACAGGAGCTGTGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: VLYYNKSYRKLWQHGLKELFREA*TGAVGP Trigger: AGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAG...CTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR TCA 90 bp | GACAAAAGACGAGAAGTAGGAATAAAATTGAAATGGGATAATGGTTCCTTCAAGTACTACAGGGCTTGGTaGGACCCAGAATGGCAAATC | + |
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Preference number: 2 (lower is better) Translates to: DKRREVGIKLKWDNGSFKYYRAW*DPEWQI Trigger: GATTTGCCATTCTGGGTCTCACCAAGCCCTGTAGTA...CTTGAAGGAACCATTATCCCATTTCAATTTTATTCCTACTTCTCGTCTTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR CCA 90 bp | CAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTGATTATTGCCCAGTATaGAAGAGATACTACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QHGLKELIIPASSLNTFCDYCPV*KRYYRA Trigger: AGCCCTGTAGTATCTCTTCCATACTGGGCAATAATC...ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR CAA 90 bp | TATAACAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTaGATTATACCAGCCTCGTCTCTCAATACTTTTTGTGACGTAACC | + |
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Preference number: 2 (lower is better) Translates to: YNKSYRKLWQHGLKE*IIPASSLNTFCDVT Trigger: GGTTACGTCACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR CAA 90 bp | GTATTGTATTATAACAAATCATACAGGAAGTTGTGGCAACATGGGTaGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VLYYNKSYRKLWQHG*KELIIPASSLNTFC Trigger: ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR CAA 90 bp | ATGTACACCCATAATCACCGCCGCCTCCGAAAACCTGAAAGGAAGGGAAACCAAGAGATACTACAGGGCTaGGTGAGACCCAGAATGGCA | + |
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Preference number: 3 (lower is better) Translates to: MYTHNHRRLRKPERKGNQEILQG*VRPRMA Trigger: TGCCATTCTGGGTCTCACCAAGCCCTGTAGTATCTC...TTGGTTTCCCTTCCTTTCAGGTTTTCGGAGGCGGCGGTGATTATGGGTGTACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR GCA 72 bp | CCCTCAGTGGTCAGTGAGAGAAGCCAATACTCAGTTTaGCAGGGTTGTAGATTCCATCCTGGTTCACTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PSVVSERSQYSV*QGCRFHPGSLS Trigger: AGAAAGTGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCTCTCACTGACCACTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCTATTTAGGGAAGCCTGAACAGGAGCTGTGGGACCTTAGAGGCAGAATCCACCTAAGGAGATTATaGCCCAGTATGGAAGAGATA | + |
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Preference number: 3 (lower is better) Translates to: QFYLGKPEQELWDLRGRIHLRRL*PSMEEI Trigger: TATCTCTTCCATACTGGGCAATAATCTCCTTAGGTG...GATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR-3UTR CAA 90 bp | AGTCCCAGACTCCTGACAGCCTATGGCACAGGAATGACAGAGCCATTTCAGAGTGGGCTGCTTTTATCATaGGGTGACATCTTTGATAAA | + |
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Preference number: 3 (lower is better) Translates to: SPRLLTAYGTGMTEPFQSGLLLS*GDIFDK Trigger: TTTATCAAAGATGTCACCCAATGATAAAAGCAGCCC...ACTCTGAAATGGCTCTGTCATTCCTGTGCCATAGGCTGTCAGGAGTCTGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| 3UTR TCA 72 bp | TATCTTGCTTTTGATTACAGCCAAGCTCAAGTTTCTTaGACCACTTATGCCACCTGGTGGCCAGCCCAGATA | + |
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Preference number: 3 (lower is better) Translates to: YLAFDYSQAQVS*TTYATWWPAQI Trigger: TATCTGGGCTGGCCACCAGGTGGCATAAGTGGTTCAAGAAACTTGAGCTTGGCTGTAATCAAAAGCAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR CCA 72 bp | TACCAGTTCTATTTAGGGAAGCCTGAACAGGAGCTGTaGGACCTTAGAGGCAGAATCCAGAGATTCATTTTG | + |
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Preference number: 3 (lower is better) Translates to: YQFYLGKPEQEL*DLRGRIQRFIL Trigger: CAAAATGAATCTCTGGATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAGAACTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| 3UTR CCA 72 bp | TCTGTATTGTATTATAACAAATCATACAGGAAGTTGTaGCAACATGGGTTGAAAGAGTTGATTATACCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SVLYYNKSYRKL*QHGLKELIIPA Trigger: GGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR CCA 90 bp | ATGTACACCCATAATCACCGCCGCCTCCGAAAACCTGAAAGGAAGGGAAACCAACTCTGGCGGGTAACATaGGGATGCCGAGCATCACGG | + |
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Preference number: 4 (lower is better) Translates to: MYTHNHRRLRKPERKGNQLWRVT*GCRASR Trigger: CCGTGATGCTCGGCATCCCCATGTTACCCGCCAGAG...TTGGTTTCCCTTCCTTTCAGGTTTTCGGAGGCGGCGGTGATTATGGGTGTACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR CCA 90 bp | CAGTTCTATTTAGGGAAGCCTGAACAGGAGCTGTGGGACCTTAGAGGCAGAATCAAGGGCTCACAGGGGTaGGGTCTCCTAGGCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: QFYLGKPEQELWDLRGRIKGSQG*GLLGST Trigger: GGTACTGCCTAGGAGACCCCACCCCTGTGAGCCCTT...GATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | ATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCTAGCTGAGGAATATCAATGTCCCAGCTaGCCCCATCTCCTCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ISECDSLSHLLTTPLAEEYQCPS*PHLLPP Trigger: GGGAGGGAGGAGATGGGGTCAGCTGGGACATTGATA...TTCCTCAGCTAGAGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR CCA 90 bp | AGAGCCATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCTAGCTACTCCTGACAGCCTATaGCACAGGAATGACAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RAISECDSLSHLLTTPLATPDSL*HRNDRA Trigger: GGCTCTGTCATTCCTGTGCCATAGGCTGTCAGGAGT...AGCTAGAGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | GAAAAGCTAAAGGGACAGGAAAACAGGACATCTAGAGGGAAGGGCTCACAGGGGCTTTCTCTCGCTTACTaGCGCTCAAACGCACCATCA | + |
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Preference number: 4 (lower is better) Translates to: EKLKGQENRTSRGKGSQGLSLAY*RSNAPS Trigger: TGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAG...CCCCTGTGAGCCCTTCCCTCTAGATGTCCTGTTTTCCTGTCCCTTTAGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | GACAGAGCCATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCTACTTTCTCTCGCTTACTaGCGCTCAAACGCACCATCA | + |
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Preference number: 4 (lower is better) Translates to: DRAISECDSLSHLLTTPLLSLAY*RSNAPS Trigger: TGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAG...TAGAGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | AAGGTCCCTCCAAACTCTGAAAGCCTATCAATGTCCCAGCTGACCCCATCTCCTTTCTTCCGACCTTTCTaGGGTATCTTCTTCCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KVPPNSESLSMSQLTPSPFFRPF*GIFFRF Trigger: GAAGCGGAAGAAGATACCTCAGAAAGGTCGGAAGAA...AGGAGATGGGGTCAGCTGGGACATTGATAGGCTTTCAGAGTTTGGAGGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | CAGTTCTATTTAGGGAAGCCTGAACAGGAGCTGTGGGACCTTAGAGGCAGAATCTACTACAGGGCTTGGTaGGACCCAGAATGGCAAATC | + |
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Preference number: 4 (lower is better) Translates to: QFYLGKPEQELWDLRGRIYYRAW*DPEWQI Trigger: GATTTGCCATTCTGGGTCTCACCAAGCCCTGTAGTA...GATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAGAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | AGAGCCATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCTAGCTCCAACACTCAGATACTaGGCAGTTGTCAGTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RAISECDSLSHLLTTPLAPTLRY*AVVSSR Trigger: TCTGCTACTGACAACTGCTCAGTATCTGAGTGTTGG...AGCTAGAGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTACTGTGTTGGTCCTCCTaGCTCTGGCGGGTAACATGG | + |
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Preference number: 4 (lower is better) Translates to: ATWWPAQITLIKPKIHVLLCWSS*LWRVTW Trigger: CCATGTTACCCGCCAGAGTCAGGAGGACCAACACAG...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | ATGTACACCCATAATCACCGCCGCCTCCGAAAACCTGAAAGGAAGGGAAACCAAGAAGTTGTGAGCTCATaGCATTTGCTCGTTTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: MYTHNHRRLRKPERKGNQEVVSS*HLLVFA Trigger: GGCGAAAACGAGCAAATGTCATGAGCTCACAACTTC...TTGGTTTCCCTTCCTTTCAGGTTTTCGGAGGCGGCGGTGATTATGGGTGTACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | AAGGTCCCTCCAAACTCTGAAAGCCTATCAATGTCCCAGCTGACCCCATCTCCTAAGGGAATGAAGTTGTaGGCTCATGACATTTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: KVPPNSESLSMSQLTPSPKGMKL*AHDICS Trigger: CGAGCAAATGTCATGAGCTCACAACTTCATTCCCTT...AGGAGATGGGGTCAGCTGGGACATTGATAGGCTTTCAGAGTTTGGAGGGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | ATGTACACCCATAATCACCGCCGCCTCCGAAAACCTGAAAGGAAGGGAAACCAACAAGCTCAAGTTTCTTaGACCACTTATGCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: MYTHNHRRLRKPERKGNQQAQVS*TTYATW Trigger: CCAGGTGGCATAAGTGGTTCAAGAAACTTGAGCTTG...TTGGTTTCCCTTCCTTTCAGGTTTTCGGAGGCGGCGGTGATTATGGGTGTACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | AGAAGCCAATACTCAGTTTGCCAGGGTTGTAGATTCCATCCTGGTTCACTTTCTGAAGTCCCAGACTCCTaGCAGCCTATGGCACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RSQYSVCQGCRFHPGSLSEVPDS*QPMAQE Trigger: TTCCTGTGCCATAGGCTGTCAGGAGTCTGGGACTTC...AGAAAGTGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR GCA 90 bp | GAAAAGCTAAAGGGACAGGAAAACAGGACATCTAGAGGGAAGGGCTCACAGGGGCACCAGTCTCAAAACTaGATCATGTCCCTGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: EKLKGQENRTSRGKGSQGHQSQN*IMSLKR Trigger: TCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTG...CCCCTGTGAGCCCTTCCCTCTAGATGTCCTGTTTTCCTGTCCCTTTAGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | GACAGAGCCATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCTAAAGTGTGTAAGGGAATaGAGTTGTGAGCTCATGACA | + |
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Preference number: 4 (lower is better) Translates to: DRAISECDSLSHLLTTPLKCVRE*SCELMT Trigger: TGTCATGAGCTCACAACTTCATTCCCTTACACACTT...TAGAGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | ATGTACACCCATAATCACCGCCGCCTCCGAAAACCTGAAAGGAAGGGAAACCAAAACTCCCTCAGTAACTaGCCAAAGATCAGCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: MYTHNHRRLRKPERKGNQNSLSN*PKISLM Trigger: CATAAGGCTGATCTTTGGTCAGTTACTGAGGGAGTT...TTGGTTTCCCTTCCTTTCAGGTTTTCGGAGGCGGCGGTGATTATGGGTGTACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | AGATTATTGCCCAGTATGGAAGAGATACTACAGGGCTTGGTGAGACCCAGAATGTTGACTCTGGTAAAATaGCCCTCAGTTGAAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: RLLPSMEEILQGLVRPRMLTLVK*PSVEGG Trigger: CCCGCCTTCAACTGAGGGTCATTTTACCAGAGTCAA...CATTCTGGGTCTCACCAAGCCCTGTAGTATCTCTTCCATACTGGGCAATAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | AGAAGCCAATACTCAGTTTGCCAGGGTTGTAGATTCCATCCTGGTTCACTTTCTCCCCTCAGTGGTCAGTaGGAGAAGCCAATACTCAGT | + |
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Preference number: 4 (lower is better) Translates to: RSQYSVCQGCRFHPGSLSPLSGQ*EKPILS Trigger: ACTGAGTATTGGCTTCTCTCACTGACCACTGAGGGG...AGAAAGTGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR TCA 90 bp | AGTGAGAGAAGCCAATACTCAGTTTGCCAGGGTTGTAGATTCCATCCTGGTTCAGGTCCCTCCAAACTCTaGAAGCCTATCAATGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SERSQYSVCQGCRFHPGSGPSKL*KPINVP Trigger: TGGGACATTGATAGGCTTTCAGAGTTTGGAGGGACC...TGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCTCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR GCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTAGACAGAGCTGCTCAATaGCCGTCTCTTGGCTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: ATWWPAQITLIKPKIHVLDRAAQ*PSLGSF Trigger: GAACGAGCCAAGAGACGGGCATTGAGCAGCTCTGTC...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR GCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTACGGGTAACATGGGGATaGCGAGCATCACGGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ATWWPAQITLIKPKIHVLRVTWG*RASRIS Trigger: GGAAATCCGTGATGCTCGGCATCCCCATGTTACCCG...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR GCA 90 bp | AAGTCCCAGACTCCTGACAGCCTATGGCACAGGAATGACAGAGCCATTTCAGAGAGCCAATACTCAGTTTaGCAGGGTTGTAGATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KSQTPDSLWHRNDRAISESQYSV*QGCRFH Trigger: ATGGAATCTACAACCCTGGCAAACTGAGTATTGGCT...CTCTGAAATGGCTCTGTCATTCCTGTGCCATAGGCTGTCAGGAGTCTGGGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
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| CDS-3UTR CCA 90 bp | AAACCCAACGACTCCAGTCGTACAATACATGTGCAAAAAGGGGCTTTAATTCATAAGTGTCACGGCACTTaGCAGGTCGGACTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KPNDSSRTIHVQKGALIHKCHGT*QVGLQH Trigger: GTGCTGGAGTCCGACCTGCCAAGTGCCGTGACACTT...ATGAATTAAAGCCCCTTTTTGCACATGTATTGTACGACTGGAGTCGTTGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | CAGCTCTTTATAGAAGGGTTGGCCTTTATTGACTCTGGTAAAATGACCCTCAGTACTGCATCATGTCCCTaGAGAGATCCTCCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QLFIEGLAFIDSGKMTLSTASCP*RDPPEA Trigger: AGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGT...ACTGAGGGTCATTTTACCAGAGTCAATAAAGGCCAACCCTTCTATAAAGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | GAAAAGCTAAAGGGACAGGAAAACAGGACATCTAGAGGGAAGGGCTCACAGGGGATCAGCTTGTCAATTTaGTACTTCAGCTTTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EKLKGQENRTSRGKGSQGISLSI*YFSFWS Trigger: GGACCAAAAGCTGAAGTATCAAATTGACAAGCTGAT...CCCCTGTGAGCCCTTCCCTCTAGATGTCCTGTTTTCCTGTCCCTTTAGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS-3UTR TCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTACCGCCTCCGAAAACCTaGAAGGAAGGGAAACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATWWPAQITLIKPKIHVLPPPKT*KEGKPR Trigger: TCTTGGTTTCCCTTCCTTTCAGGTTTTCGGAGGCGG...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGCCAATACTCAGTTTGCCAGGGTTGTAGATTCCATCCTGGTTCACTTTCCTATGGCACAGGAATaGCAGAGCCATTTCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: REANTQFARVVDSILVHFPMAQE*QSHFRV Trigger: CACTCTGAAATGGCTCTGTCATTCCTGTGCCATAGG...AAAGTGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTATTTAGGGAAGCCTGAACAGGAGCTGTGGGACCTTAGAGGCAGAATCGATTATTGCCCAGTATaGAAGAGATACTACAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QFYLGKPEQELWDLRGRIDYCPV*KRYYRA Trigger: AGCCCTGTAGTATCTCTTCCATACTGGGCAATAATC...GATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | GTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTCCTCTGGAGCATCTaGGTACTGCTCCTTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVATWVERVDYTSLVSQYFLWSI*VLLLKF Trigger: GAACTTAAGGAGCAGTACTCAGATGCTCCAGAGGAA...GTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | AATGGCAAATCCAAAGAGACTCAATTTGTACTCCCCACCTTGCACCTGATCACCAAGGGAATGAAGTTGTaGGCTCATGACATTTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NGKSKETQFVLPTLHLITKGMKL*AHDICS Trigger: CGAGCAAATGTCATGAGCTCACAACTTCATTCCCTT...GGTGATCAGGTGCAAGGTGGGGAGTACAAATTGAGTCTCTTTGGATTTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | CAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTATTTAGGGAAGCCTaGACAGGAGCTGTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QIIQEVVATWVERVDYTSLFREA*TGAVGP Trigger: AGGTCCCACAGCTCCTGTTCAGGCTTCCCTAAATAG...GCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | AGATTATTGCCCAGTATGGAAGAGATACTACAGGGCTTGGTGAGACCCAGAATGCCTCAGAGCTCAACTTaGTCATCATATTGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLPSMEEILQGLVRPRMPQSST*SSYCWD Trigger: ATCCCAGCAATATGATGAGCAAGTTGAGCTCTGAGG...CATTCTGGGTCTCACCAAGCCCTGTAGTATCTCTTCCATACTGGGCAATAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | CAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCCTGAACAGGAGCTGTaGGACCTTAGAGGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QIIQEVVATWVERVDYTSPEQEL*DLRGRI Trigger: GATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGG...GCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | AAACCCAACGACTCCAGTCGTACAATACATGTGCAAAAAGGGGCTTTAATTCATCACAGATTTCTTCCCTaGAGCCTCAGACTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: KPNDSSRTIHVQKGALIHHRFLP*SLRLVI Trigger: GATGACCAGTCTGAGGCTTCAGGGAAGAAATCTGTG...ATGAATTAAAGCCCCTTTTTGCACATGTATTGTACGACTGGAGTCGTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | GGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTGACGTAAAGGCTGCCTGTCACTaGAGTCTTGATCAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKELIIPASSLNTFCDVKAACH*SLDQLV Trigger: GACAAGCTGATCAAGACTGCAGTGACAGGCAGCCTT...TACGTCACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | AAACCCAACGACTCCAGTCGTACAATACATGTGCAAAAAGGGGCTTTAATTCATTCAATGCCCGTCTCTTaGCTCGTTCTAGACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPNDSSRTIHVQKGALIHSMPVS*LVLDAS Trigger: AGAAGCGTCTAGAACGAGCCAAGAGACGGGCATTGA...ATGAATTAAAGCCCCTTTTTGCACATGTATTGTACGACTGGAGTCGTTGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | AGATTATTGCCCAGTATGGAAGAGATACTACAGGGCTTGGTGAGACCCAGAATGTCATACAGGAAGTTGTaGCAACATGGGTTGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPSMEEILQGLVRPRMSYRKL*QHGLKE Trigger: CTCTTTCAACCCATGTTGCCACAACTTCCTGTATGA...CATTCTGGGTCTCACCAAGCCCTGTAGTATCTCTTCCATACTGGGCAATAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | CAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTACCACTTATGCCACCTaGTGGCCAGCCCAGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: QHGLKELIIPASSLNTFCTTYAT*WPAQIT Trigger: TGTTATCTGGGCTGGCCACCAGGTGGCATAAGTGGT...ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | GAAAAGCTAAAGGGACAGGAAAACAGGACATCTAGAGGGAAGGGCTCACAGGGGATAATCTTGCTGATGTaGAAAGGTTCTATCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKLKGQENRTSRGKGSQGIILLM*KGSILL Trigger: AAGCAAGATAGAACCTTTCCACATCAGCAAGATTAT...CCCCTGTGAGCCCTTCCCTCTAGATGTCCTGTTTTCCTGTCCCTTTAGCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | TGTAGATTCCATCCTGGTTCACTTTCTCTTCTAGAGCCTGTTTTATCTCTCCAAGAAGTTGTGAGCTCATaGCATTTGCTCGTTTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CRFHPGSLSLLEPVLSLQEVVSS*HLLVFA Trigger: GGCGAAAACGAGCAAATGTCATGAGCTCACAACTTC...TTGGAGAGATAAAACAGGCTCTAGAAGAGAAAGTGAACCAGGATGGAATCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556699.1 |
||
| CDS-3UTR TCA 90 bp | TTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTAAGGGAAACCAAGAATaGGGCAAAGGACAGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWQHGLKELIIPASSLNTKGNQE*GKGQLE Trigger: TTCCAACTGTCCTTTGCCTCATTCTTGGTTTCCCTT...AGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | CAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCGCTTTTCCAAAACCGTaGGAATCTCCACCAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QIIQEVVATWVERVDYTSAFPKP*ESPPVS Trigger: TGAGACTGGTGGAGATTCGCACGGTTTTGGAAAAGC...GCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTAAGACTGGTCATCTTCTaGTTCATCTTCCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ATWWPAQITLIKPKIHVLRLVIF*FIFLLI Trigger: GATGAGGAGGAAGATGAAGCAGAAGATGACCAGTCT...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | GTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTGTCCAGAATGAGGTaGGTCAAATCCATAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VVATWVERVDYTSLVSQYLSRMR*VKSIRY Trigger: GTACCTTATGGATTTGACCCACCTCATTCTGGACAA...GTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | CAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTACTTATGCCACCTGGTaGCCAGCCCAGATAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: QHGLKELIIPASSLNTFCTYATW*PAQITL Trigger: TAGTGTTATCTGGGCTGGCCACCAGGTGGCATAAGT...ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | CAGCTCTTTATAGAAGGGTTGGCCTTTATTGACTCTGGTAAAATGACCCTCAGTAACACAAGACTATACTaGCTCTTCACTCTAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLFIEGLAFIDSGKMTLSNTRLY*LFTLAF Trigger: GAAGGCTAGAGTGAAGAGTCAGTATAGTCTTGTGTT...ACTGAGGGTCATTTTACCAGAGTCAATAAAGGCCAACCCTTCTATAAAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTAGTTACAGCCATCACTTaGTCCTGGAGATTTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATWWPAQITLIKPKIHVLVTAIT*SWRFFR Trigger: TCTGAAAAATCTCCAGGAGCAAGTGATGGCTGTAAC...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | CAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCGGAGCATCTGAGTACTaGTCCTTAAGTTCACGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QIIQEVVATWVERVDYTSGASEY*SLSSRM Trigger: CATTCGTGAACTTAAGGAGCAGTACTCAGATGCTCC...GCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR GCA 90 bp | GTATTGTATTATAACAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTCTTGAACCACTTATaGCACCTGGTGGCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLYYNKSYRKLWQHGLKEFLNHL*HLVASP Trigger: TGGGCTGGCCACCAGGTGGCATAAGTGGTTCAAGAA...CTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | GGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTGACGTAAAGTGTGTAAGGGAATaGAGTTGTGAGCTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLKELIIPASSLNTFCDVKCVRE*SCELMT Trigger: TGTCATGAGCTCACAACTTCATTCCCTTACACACTT...TACGTCACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | AAACCCAACGACTCCAGTCGTACAATACATGTGCAAAAAGGGGCTTTAATTCATTTCATCATAATGTACTaGAACCAAGCGTGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KPNDSSRTIHVQKGALIHFIIMY*NQAWRN Trigger: GTTCCTCCACGCTTGGTTCCAGTACATTATGATGAA...ATGAATTAAAGCCCCTTTTTGCACATGTATTGTACGACTGGAGTCGTTGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | TTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTAACTTTTTGTGTCAGTaGTTTCACTTGTGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LWQHGLKELIIPASSLNTNFLCQ*FHLCSY Trigger: GTAACTGCACAAGTGAAATCACTGACACAAAAAGTT...AGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | GACAAAAGACGAGAAGTAGGAATAAAATTGAAATGGGATAATGGTTCCTTCAAGTTCTTCCGACCTTTCTaGGGTATCTTCTTCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DKRREVGIKLKWDNGSFKFFRPF*GIFFRF Trigger: GAAGCGGAAGAAGATACCTCAGAAAGGTCGGAAGAA...CTTGAAGGAACCATTATCCCATTTCAATTTTATTCCTACTTCTCGTCTTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CCA 90 bp | CAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCTACTGGAACCAAGCGTaGAGGAACATATTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QIIQEVVATWVERVDYTSYWNQA*RNIFLR Trigger: TCTAAGAAATATGTTCCTCCACGCTTGGTTCCAGTA...GCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | GACAAAAGACGAGAAGTAGGAATAAAATTGAAATGGGATAATGGTTCCTTCAAGATCATATTGCTGGGATaGGGCTTAAAACGAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DKRREVGIKLKWDNGSFKIILLG*GLKRSG Trigger: CCCACTTCGTTTTAAGCCTCATCCCAGCAATATGAT...CTTGAAGGAACCATTATCCCATTTCAATTTTATTCCTACTTCTCGTCTTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| 3UTR CAA 72 bp | TATAACAAATCATACAGGAAGTTGTGGCAACATGGGTaGAAAGAGTTGATTATACCAGCCTCGTCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNKSYRKLWQHG*KELIIPASSLN Trigger: ATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR TCA 90 bp | GTATTGTATTATAACAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGGTTCTATCTTGCTTTTaGTTACAGCCAAGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLYYNKSYRKLWQHGLKEVLSCF*LQPSSS Trigger: ACTTGAGCTTGGCTGTAATCAAAAGCAAGATAGAAC...CTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| 3UTR CAA 72 bp | ATAAGAATAATCTTGCTGATGTGGAAAGGTTCTATCTaGCTTTTGATTACAGCCAAGCTCAAGTTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRIILLMWKGSI*LLITAKLKFLE Trigger: TTCAAGAAACTTGAGCTTGGCTGTAATCAAAAGCAAGATAGAACCTTTCCACATCAGCAAGATTATTCTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS TCA 90 bp | TTGGGTTACCGGACAGGAACGGTAACTCTAGGGAGGCCGCCTCCCTaGAGCAACTTTCATCACCACCCTTCCCTGGTACCAACAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGYRTGTVTLGRPPP*SNFHHHPSLVPTVC Trigger: GCAAACTGTTGGTACCAGGGAAGGGTGGTGATGAAAGTTGCTTCAGGGAGGCGGCCTCCCTAGAGTTACCGTTCCTGTCCGGTAACCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS GCA 90 bp | TGGGGATGCCGAGCATCACGGATTTCCTCTGGAGCATCTGAGTACTaGTCCTTAAGTTCACGAATGACAGAGCTGCTCAATGCCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WGCRASRISSGASEY*SLSSRMTELLNARL Trigger: GAGACGGGCATTGAGCAGCTCTGTCATTCGTGAACTTAAGGAGCAGTACTCAGATGCTCCAGAGGAAATCCGTGATGCTCGGCATCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 ENST00000556580.4 |
||
| CDS TCA 90 bp | GATCCTGGAGACAGATGGAGAAGTGATGGAATGGCACTGTGGTTCTaGGAGCCAGCATCCCTTCCCAAGTTCCTCATGGTAATAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DPGDRWRSDGMALWF*EPASLPKFLMVISP Trigger: GGGGCTTATTACCATGAGGAACTTGGGAAGGGATGCTGGCTCTCAGAACCACAGTGCCATTCCATCACTTCTCCATCTGTCTCCAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556103.1 |
||
| CDS CCA 90 bp | AAGTCATTCTTTCCTCAGGATTATAGGAAAGTGGAACGTCTAGGGTaGGAAACTGCCCTCTCTCCGTCAGACACCCAGACTCGGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSFFPQDYRKVERLG*ETALSPSDTQTRGL Trigger: AAGGCCCCGAGTCTGGGTGTCTGACGGAGAGAGGGCAGTTTCCCACCCTAGACGTTCCACTTTCCTATAATCCTGAGGAAAGAATGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS TCA 90 bp | GGTAACATGGGGATGCCGAGCATCACGGATTTCCTCTGGAGCATCTaGGTACTGCTCCTTAAGTTCACGAATGACAGAGCTGCTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GNMGMPSITDFLWSI*VLLLKFTNDRAAQC Trigger: GCATTGAGCAGCTCTGTCATTCGTGAACTTAAGGAGCAGTACTCAGATGCTCCAGAGGAAATCCGTGATGCTCGGCATCCCCATGTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 ENST00000556580.4 |
||
| CDS TCA 90 bp | CATACCGTGCGAATCTCCACCAGTCTCAAAACTGCATCATGTCCCTaGAGAGATCCTCCTGAGGCTTTGTCCAGAATGAGGTGGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HTVRISTSLKTASCP*RDPPEALSRMRWVK Trigger: TTTGACCCACCTCATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAGATTCGCACGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000553336.5 ENST00000553439.5 ENST00000556022.3 |
||
| CDS TCA 90 bp | CTCAACGTGCGAATCTCCACCAGTCTCAAAACTGCATCATGTCCCTaGAGAGATCCTCCTGAGGCTTTGTCCAGAATGAGGTGGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNVRISTSLKTASCP*RDPPEALSRMRWVK Trigger: TTTGACCCACCTCATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAGATTCGCACGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556483.5 |
||
| CDS TCA 90 bp | AAAACCGTGCGAATCTCCACCAGTCTCAAAACTGCATCATGTCCCTaGAGAGATCCTCCTGAGGCTTTGTCCAGAATGAGGTGGGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KTVRISTSLKTASCP*RDPPEALSRMRWVK Trigger: TTTGACCCACCTCATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAGATTCGCACGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000555128.5 |
||
| CDS CCA 90 bp | CTTAATAGGATTCTGATCCTGGAGACAGATGGAGAAGTGATGGAATaGCACTGTGGTTCTGAGAGCCAGCATCCCTTCCCAAGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LNRILILETDGEVME*HCGSESQHPFPSSS Trigger: TGAGGAACTTGGGAAGGGATGCTGGCTCTCAGAACCACAGTGCCATTCCATCACTTCTCCATCTGTCTCCAGGATCAGAATCCTATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556103.1 |
||
| CDS TCA 90 bp | CTCCACCAGTCTCAAAACTGCATCATGTCCCTGAAGAGATCCTCCTaGGGCTTTGTCCAGAATGAGGTGGGTCAAATCCATAAGGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: LHQSQNCIMSLKRSS*GFVQNEVGQIHKVH Trigger: ATGTACCTTATGGATTTGACCCACCTCATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556022.3 ENST00000556483.5 |
||
| CDS TCA 90 bp | GTTCCCCCTGTCAAAGCACTGATGTCACTGAAGTGTGTAAGGGAATaGAGTTGTGAGCTCATGACATTTGCTCGTTTTCGCCGTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPPVKALMSLKCVRE*SCELMTFARFRRPF Trigger: GAAAGGACGGCGAAAACGAGCAAATGTCATGAGCTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTGCTTTGACAGGGGGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556103.1 ENST00000556483.5 ENST00000556580.4 ENST00000556699.1 |
||
| CDS-3UTR CAA 90 bp | GTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACATAGTTAATCCTGTGTaGGTCCTCCTGACTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVATWVERVDYTSLVSQYIVNPV*VLLTLA Trigger: CGCCAGAGTCAGGAGGACCAACACAGGATTAACTAT...GTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCAATACTCAGTTTGCCAGGGTTGTAGATTCCATCCTGGTTCACTTTCTTCAGATACTGAGCAGTaGTCAGTAGCAGAGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RSQYSVCQGCRFHPGSLSSDTEQ*SVAEAL Trigger: GAGTGCCTCTGCTACTGACAACTGCTCAGTATCTGA...AGAAAGTGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556699.1 |
||
| CDS-3UTR CAA 90 bp | AGAGCCATTTCAGAGTGTGACTCACTGTCCCACCTGCTGACTACTCCTCTAGCTCATTGGGTGACATCTTaGATAAATTATCCCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAISECDSLSHLLTTPLAHWVTS*INYPLS Trigger: ACTGAGGGGATAATTTATCAAAGATGTCACCCAATG...AGCTAGAGGAGTAGTCAGCAGGTGGGACAGTGAGTCACACTCTGAAATGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
||
| CDS TCA 90 bp | TGTCAAAGCACTGATGTCACTGAAGTGTGTAAGGGAATGAAGTTGTaGGCTCATGACATTTGCTCGTTTTCGCCGTCCTTTCTCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CQSTDVTEVCKGMKL*AHDICSFSPSFLSL Trigger: AAGCGAGAGAAAGGACGGCGAAAACGAGCAAATGTCATGAGCTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTGCTTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556103.1 ENST00000556483.5 ENST00000556580.4 ENST00000556699.1 |
||
| CDS CCA 90 bp | CTCCCGCTCAGCTTCTGTTTCATCATAATGTACTGGAACCAAGCGTaGAGGAACATATTTCTTAGACACTCCCTTCACAGATTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLSFCFIIMYWNQA*RNIFLRHSLHRFLP Trigger: GGGAAGAAATCTGTGAAGGGAGTGTCTAAGAAATATGTTCCTCCACGCTTGGTTCCAGTACATTATGATGAAACAGAAGCTGAGCGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGACGAGAAGTAGGAATAAAATTGAAATGGGATAATGGTTCCTTCAAGGAAGTGTCACGGCACTaGGCAGGTCGGACTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DKRREVGIKLKWDNGSFKEVSRH*AGRTPA Trigger: TGCTGGAGTCCGACCTGCCAAGTGCCGTGACACTTC...CTTGAAGGAACCATTATCCCATTTCAATTTTATTCCTACTTCTCGTCTTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | GTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTCCTCAGAGCTCAACTaGCTCATCATATTGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVATWVERVDYTSLVSQYSSELN*LIILLG Trigger: TCCCAGCAATATGATGAGCAAGTTGAGCTCTGAGGA...GTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS TCA 90 bp | ACCCTTTTCTGTAGGATAGGCACCAGCTTGAACTTTTTGTGTCAGTaGTTTCACTTGTGCAGTTACAGCCATCACTTGCTCCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: TLFCRIGTSLNFLCQ*FHLCSYSHHLLLEI Trigger: AATCTCCAGGAGCAAGTGATGGCTGTAACTGCACAAGTGAAATCACTGACACAAAAAGTTCAAGCTGGTGCCTATCCTACAGAAAAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556483.5 |
||
| CDS TCA 90 bp | AGTCACATCCTACTACAACCATATCTCAACCTCACCTCATCAAGATaGACAGTTCCCCCTGTCAAAGCACTGATGTCACTGAAGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHILLQPYLNLTSSR*TVPPVKALMSLKCV Trigger: TACACACTTCAGTGACATCAGTGCTTTGACAGGGGGAACTGTTCATCTTGATGAGGTGAGGTTGAGATATGGTTGTAGTAGGATGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556103.1 |
||
| CDS GCA 90 bp | CACAACTTCATGATGGTCTCCTCACTTACTAAGGCTGCCTGTCACTaGAGTCTTGATCAGCTTGTCAATTTGATACTTCAGCTTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HNFMMVSSLTKAACH*SLDQLVNLILQLLV Trigger: GACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACTGCAGTGACAGGCAGCCTTAGTAAGTGAGGAGACCATCATGAAGTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553439.5 |
||
| CDS TCA 90 bp | TACCTTTTCTGTAGGATAGGCACCAGCTTGAACTTTTTGTGTCAGTaGTTTCACTTGTGCAGTTACAGCCATCACTTGCTCCTGGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: YLFCRIGTSLNFLCQ*FHLCSYSHHLLLEI Trigger: AATCTCCAGGAGCAAGTGATGGCTGTAACTGCACAAGTGAAATCACTGACACAAAAAGTTCAAGCTGGTGCCTATCCTACAGAAAAGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000556378.5 ENST00000556953.1 |
||
| CDS-3UTR CAA 90 bp | GCCACCTGGTGGCCAGCCCAGATAACACTAATAAAACCTAAAATTCATGTGTTAAGTTACAGCCATCACTaGCTCCTGGAGATTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATWWPAQITLIKPKIHVLSYSHH*LLEIFQ Trigger: CTGAAAAATCTCCAGGAGCAAGTGATGGCTGTAACT...TAACACATGAATTTTAGGTTTTATTAGTGTTATCTGGGCTGGCCACCAGGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGACGAGAAGTAGGAATAAAATTGAAATGGGATAATGGTTCCTTCAAGGATCCTCCTGAGGCTTaGTCCAGAATGAGGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DKRREVGIKLKWDNGSFKDPPEA*SRMRWV Trigger: GACCCACCTCATTCTGGACAAAGCCTCAGGAGGATC...CTTGAAGGAACCATTATCCCATTTCAATTTTATTCCTACTTCTCGTCTTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | GTATTGTATTATAACAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGCTCAATGCCCGTCTCTaGGCTCGTTCTAGACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLYYNKSYRKLWQHGLKELNARL*ARSRRF Trigger: GAAGCGTCTAGAACGAGCCAAGAGACGGGCATTGAG...CTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGTGACACTTTACCAGTTCTATTTAGGGAAGCCTGAACAGGAGCTGTGGAAATCATACAGGAAGTaGTGGCAACATGGGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQVTLYQFYLGKPEQELWKSYRK*WQHGLK Trigger: TTTCAACCCATGTTGCCACAACTTCCTGTATGATTT...CCACAGCTCCTGTTCAGGCTTCCCTAAATAGAACTGGTAAAGTGTCACTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS GCA 90 bp | AAATTTAGAAACCTAAAACTCCAAGAAGCCAAATGCTTCATACCGTaGGAATCTCCACCAGTCTCAAAACTGCATCATGTCCCTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KFRNLKLQEAKCFIP*ESPPVSKLHHVPEE Trigger: CTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAGATTCGCACGGTATGAAGCATTTGGCTTCTTGGAGTTTTAGGTTTCTAAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553336.5 ENST00000553439.5 ENST00000556022.3 |
||
| CDS-3UTR CAA 90 bp | GGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTGACGTATTGATACTTCAGCTTTaGGTCCAAGGGACGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLKELIIPASSLNTFCDVLILQL*VQGTKL Trigger: AAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAA...TACGTCACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | GTATTGTATTATAACAAATCATACAGGAAGTTGTGGCAACATGGGTTGAAAGAGGAGATACTACAGGGCTaGGTGAGACCCAGAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLYYNKSYRKLWQHGLKEEILQG*VRPRMA Trigger: TGCCATTCTGGGTCTCACCAAGCCCTGTAGTATCTC...CTCTTTCAACCCATGTTGCCACAACTTCCTGTATGATTTGTTATAATACAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | CAGCTCTTTATAGAAGGGTTGGCCTTTATTGACTCTGGTAAAATGACCCTCAGTGGTTCTATCTTGCTTTaGATTACAGCCAAGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QLFIEGLAFIDSGKMTLSGSILL*ITAKLK Trigger: CTTGAGCTTGGCTGTAATCAAAAGCAAGATAGAACC...ACTGAGGGTCATTTTACCAGAGTCAATAAAGGCCAACCCTTCTATAAAGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | GTTGTGGCAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTGGAAAGGTTCTATCTaGCTTTTGATTACAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVATWVERVDYTSLVSQYWKGSI*LLITAK Trigger: CTTGGCTGTAATCAAAAGCAAGATAGAACCTTTCCA...GTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTGCCACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | AGAGAAGCCAATACTCAGTTTGCCAGGGTTGTAGATTCCATCCTGGTTCACTTTGGGCTGCTTTTATCATaGGGTGACATCTTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: REANTQFARVVDSILVHFGLLLS*GDIFDK Trigger: TTTATCAAAGATGTCACCCAATGATAAAAGCAGCCC...AAAGTGAACCAGGATGGAATCTACAACCCTGGCAAACTGAGTATTGGCTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
||
| CDS TCA 90 bp | AGGAGAATACTACAACCCCTTACCTTGCTCATCATATTGCTGGGATaGGGCTTAAAACGAAGTGGGTCATTCTCACCTGAAATAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRILQPLTLLIILLG*GLKRSGSFSPEINN Trigger: GTTATTTATTTCAGGTGAGAATGACCCACTTCGTTTTAAGCCTCATCCCAGCAATATGATGAGCAAGGTAAGGGGTTGTAGTATTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553439.5 |
||
| CDS TCA 90 bp | AAGTTCCTCATGGTAATAAGCCCCACATACATTTTGCTGAAAGCATaGAAGTCACATCCTACTACAACCATATCTCAACCTCACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KFLMVISPTYILLKA*KSHPTTTISQPHLI Trigger: GATGAGGTGAGGTTGAGATATGGTTGTAGTAGGATGTGACTTTCATGCTTTCAGCAAAATGTATGTGGGGCTTATTACCATGAGGAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556103.1 |
||
| CDS-3UTR CAA 90 bp | GGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTGACGTACACCTAAGGAGATTATaGCCCAGTATGGAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: GLKELIIPASSLNTFCDVHLRRL*PSMEEI Trigger: TATCTCTTCCATACTGGGCAATAATCTCCTTAGGTG...TACGTCACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTCATGGGTTGAAAGAGTaGATTATACCAGCCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QHGLKELIIPASSLNTFCHGLKE*IIPASS Trigger: AGACGAGGCTGGTATAATCAACTCTTTCAACCCATG...ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | AAACCCAACGACTCCAGTCGTACAATACATGTGCAAAAAGGGGCTTTAATTCATGATCAGCTTGTCAATTaGATACTTCAGCTTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPNDSSRTIHVQKGALIHDQLVN*ILQLLV Trigger: GACCAAAAGCTGAAGTATCAAATTGACAAGCTGATC...ATGAATTAAAGCCCCTTTTTGCACATGTATTGTACGACTGGAGTCGTTGGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGTTGAAAGAGTTGATTATACCAGCCTCGTCTCTCAATACTTTTTGTCTCTTTATAGAAGGGTaGGCCTTTATTGACTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QHGLKELIIPASSLNTFCLFIEG*AFIDSG Trigger: ACCAGAGTCAATAAAGGCCAACCCTTCTATAAAGAG...ACAAAAAGTATTGAGAGACGAGGCTGGTATAATCAACTCTTTCAACCCATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397154.7 |
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| CDS GCA 90 bp | TTTCCTTCCCAAAATGAAGCACACACCAGAGTCCCTATATTAAGGTaGCACATAAGGCACCTAAAATATGTACAAAGTAGAGCAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: FPSQNEAHTRVPILR*HIRHLKYVQSRANE Trigger: TTCATTTGCTCTACTTTGTACATATTTTAGGTGCCTTATGTGGCACCTTAATATAGGGACTCTGGTGTGTGCTTCATTTTGGGAAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553336.5 ENST00000553439.5 ENST00000556022.3 |
||
| CDS-3UTR CAA 90 bp | AAACCCAACGACTCCAGTCGTACAATACATGTGCAAAAAGGGGCTTTAATTCATGAGATAAGAATAATCTaGCTGATGTGGAAAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KPNDSSRTIHVQKGALIHEIRII*LMWKGS Trigger: AGAACCTTTCCACATCAGCAAGATTATTCTTATCTC...ATGAATTAAAGCCCCTTTTTGCACATGTATTGTACGACTGGAGTCGTTGGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397154.7 |
||
| CDS CAA 90 bp | GGGCCTTCACACTCGGGTTCACAGACTCGCCTTAAAGCCAGCCCCTaGGGTTACCGGACAGGAACGGTAACTCTAGGGAGGCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSHSGSQTRLKASP*GYRTGTVTLGRPPP Trigger: GGGAGGCGGCCTCCCTAGAGTTACCGTTCCTGTCCGGTAACCCAAGGGGCTGGCTTTAAGGCGAGTCTGTGAACCCGAGTGTGAAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS TCA 72 bp | CGGACAGGAACGGTAACTCTAGGGAGGCCGCCTCCCTaGAGCAACTTTCATCACCACCCTTCCCTGGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: RTGTVTLGRPPP*SNFHHHPSLVP Trigger: TGGTACCAGGGAAGGGTGGTGATGAAAGTTGCTTCAGGGAGGCGGCCTCCCTAGAGTTACCGTTCCTGTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS CAA 72 bp | CACTCGGGTTCACAGACTCGCCTTAAAGCCAGCCCCTaGGGTTACCGGACAGGAACGGTAACTCTAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSGSQTRLKASP*GYRTGTVTLGR Trigger: CCTCCCTAGAGTTACCGTTCCTGTCCGGTAACCCAAGGGGCTGGCTTTAAGGCGAGTCTGTGAACCCGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS CAA 72 bp | CTTGCTCCTGGAGATTTTTCAGAAGTGTCACGGCACTaGGCAGGTCGGACTCCAGCACCCCCTACAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPGDFSEVSRH*AGRTPAPPTEG Trigger: CCCTTCTGTAGGGGGTGCTGGAGTCCGACCTGCCAAGTGCCGTGACACTTCTGAAAAATCTCCAGGAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS CCA 72 bp | TTGCTCCTGGAGATTTTTCAGAAGTGTCACGGCACTTaGCAGGTCGGACTCCAGCACCCCCTACAGAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLEIFQKCHGT*QVGLQHPLQKG Trigger: TCCCTTCTGTAGGGGGTGCTGGAGTCCGACCTGCCAAGTGCCGTGACACTTCTGAAAAATCTCCAGGAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS CAA 72 bp | AGTTCACGAATGACAGAGCTGCTCAATGCCCGTCTCTaGGCTCGTTCTAGACGCTTCTTCTCCCGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRMTELLNARL*ARSRRFFSRSA Trigger: AGCTGAGCGGGAGAAGAAGCGTCTAGAACGAGCCAAGAGACGGGCATTGAGCAGCTCTGTCATTCGTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 ENST00000556580.4 |
||
| CDS CAA 72 bp | CAACTTTCATCACCACCCTTCCCTGGTACCAACAGTTaGCCTCCAGCCGCTGAAGGCAAAGGACAACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLSSPPFPGTNS*PPAAEGKGQLH Trigger: GTGGAGTTGTCCTTTGCCTTCAGCGGCTGGAGGCAAACTGTTGGTACCAGGGAAGGGTGGTGATGAAAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS GCA 72 bp | AACTTTCATCACCACCCTTCCCTGGTACCAACAGTTTaGCTCCAGCCGCTGAAGGCAAAGGACAACTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: NFHHHPSLVPTV*LQPLKAKDNST Trigger: TGTGGAGTTGTCCTTTGCCTTCAGCGGCTGGAGGCAAACTGTTGGTACCAGGGAAGGGTGGTGATGAAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000555128.5 ENST00000556953.1 |
||
| CDS CAA 90 bp | TGCTCCTTAAGTTCACGAATGACAGAGCTGCTCAATGCCCGTCTCTaGGCTCGTTCTAGACGCTTCTTCTCCCGCTCAGCTTCTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSLSSRMTELLNARL*ARSRRFFSRSASVS Trigger: TGAAACAGAAGCTGAGCGGGAGAAGAAGCGTCTAGAACGAGCCAAGAGACGGGCATTGAGCAGCTCTGTCATTCGTGAACTTAAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 ENST00000556580.4 |
||
| CDS TCA 72 bp | GGGATGCCGAGCATCACGGATTTCCTCTGGAGCATCTaGGTACTGCTCCTTAAGTTCACGAATGACAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GMPSITDFLWSI*VLLLKFTNDRA Trigger: AGCTCTGTCATTCGTGAACTTAAGGAGCAGTACTCAGATGCTCCAGAGGAAATCCGTGATGCTCGGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 ENST00000556580.4 |
||
| CDS TCA 72 bp | CGAATCTCCACCAGTCTCAAAACTGCATCATGTCCCTaGAGAGATCCTCCTGAGGCTTTGTCCAGAATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RISTSLKTASCP*RDPPEALSRMR Trigger: CCTCATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGACTGGTGGAGATTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556022.3 ENST00000556483.5 |
||
| CDS TCA 72 bp | CATTTGCTCGTTTTCGCCGTCCTTTCTCTCGCTTACTaGCGCTCAAACGCACCATCATGCTCTCCTCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLLVFAVLSLAY*RSNAPSCSPHS Trigger: ACTATGAGGAGAGCATGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAGGACGGCGAAAACGAGCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556103.1 ENST00000556483.5 ENST00000556580.4 |
||
| CDS GCA 72 bp | CGAGCATCACGGATTTCCTCTGGAGCATCTGAGTACTaGTCCTTAAGTTCACGAATGACAGAGCTGCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RASRISSGASEY*SLSSRMTELLN Trigger: ATTGAGCAGCTCTGTCATTCGTGAACTTAAGGAGCAGTACTCAGATGCTCCAGAGGAAATCCGTGATGCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 ENST00000556580.4 |
||
| CDS TCA 72 bp | TCTCAAAACTGCATCATGTCCCTGAAGAGATCCTCCTaGGGCTTTGTCCAGAATGAGGTGGGTCAAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQNCIMSLKRSS*GFVQNEVGQIH Trigger: ATGGATTTGACCCACCTCATTCTGGACAAAGCCTCAGGAGGATCTCTTCAGGGACATGATGCAGTTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556022.3 ENST00000556483.5 |
||
| CDS TCA 72 bp | TCTAGAGCCTGTTTTATCTCTCCAACACTCAGATACTaGGCAGTTGTCAGTAGCAGAGGCACTCCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRACFISPTLRY*AVVSSRGTPEL Trigger: AAGCTCTGGAGTGCCTCTGCTACTGACAACTGCTCAGTATCTGAGTGTTGGAGAGATAAAACAGGCTCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556699.1 |
||
| CDS CCA 72 bp | AGGTGGGTCAAATCCATAAGGTACATGAGCAGCAGCTaGTCTTTCACTTCCAAGAAGCTGAGACCCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RWVKSIRYMSSS*SFTSKKLRPFS Trigger: AGAAAAGGGTCTCAGCTTCTTGGAAGTGAAAGACCAGCTGCTGCTCATGTACCTTATGGATTTGACCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556483.5 |
||
| CDS CAA 72 bp | GCTGCCTGTCACTGCAGTCTTGATCAGCTTGTCAATTaGATACTTCAGCTTTTGGTCCAAGGGACGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AACHCSLDQLVN*ILQLLVQGTKL Trigger: AAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACTGCAGTGACAGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556022.3 |
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| CDS CAA 90 bp | TGTCACTGCAGTCTTGATCAGCTTGTCAATTTGATACTTCAGCTTTaGGTCCAAGGGACGAAGCTTTTCCAAAACCGTGCGAATCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: CHCSLDQLVNLILQL*VQGTKLFQNRANLH Trigger: GTGGAGATTCGCACGGTTTTGGAAAAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACTGCAGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000555128.5 |
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| CDS TCA 72 bp | CTGCCTGTCACTGCAGTCTTGATCAGCTTGTCAATTTaGTACTTCAGCTTTTGGTCCAAGGGACGAAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPVTAVLISLSI*YFSFWSKGRSF Trigger: AAAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACTGCAGTGACAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556022.3 |
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| CDS TCA 72 bp | CTACAACCCCTTACCTTGCTCATCATATTGCTGGGATaGGGCTTAAAACGAAGTGGGTCATTCTCACCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LQPLTLLIILLG*GLKRSGSFSPE Trigger: TTCAGGTGAGAATGACCCACTTCGTTTTAAGCCTCATCCCAGCAATATGATGAGCAAGGTAAGGGGTTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553439.5 |
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| CDS TCA 72 bp | CTACTACAACCATATCTCAACCTCACCTCATCAAGATaGACAGTTCCCCCTGTCAAAGCACTGATGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: LLQPYLNLTSSR*TVPPVKALMSL Trigger: CAGTGACATCAGTGCTTTGACAGGGGGAACTGTTCATCTTGATGAGGTGAGGTTGAGATATGGTTGTAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556103.1 |
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| CDS GCA 72 bp | ACGAAGTGGGTCATTCTCACTAAGGCTGCCTGTCACTaGAGTCTTGATCAGCTTGTCAATTTGATACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TKWVILTKAACH*SLDQLVNLILQ Trigger: CTGAAGTATCAAATTGACAAGCTGATCAAGACTGCAGTGACAGGCAGCCTTAGTGAGAATGACCCACTTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000555128.5 ENST00000556022.3 |
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| CDS TCA 72 bp | TGTAGGATAGGCACCAGCTTGAACTTTTTGTGTCAGTaGTTTCACTTGTGCAGTTACAGCCATCACTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CRIGTSLNFLCQ*FHLCSYSHHLL Trigger: GAGCAAGTGATGGCTGTAACTGCACAAGTGAAATCACTGACACAAAAAGTTCAAGCTGGTGCCTATCCTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553336.5 ENST00000553439.5 ENST00000555128.5 ENST00000556378.5 ENST00000556483.5 ENST00000556953.1 |
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| CDS TCA 72 bp | GTCAAAGCACTGATGTCACTGAAGTGTGTAAGGGAATaGAGTTGTGAGCTCATGACATTTGCTCGTTTTCGC | + |
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Preference number: 6 (lower is better) Translates to: VKALMSLKCVRE*SCELMTFARFR Trigger: GCGAAAACGAGCAAATGTCATGAGCTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTGCTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556103.1 ENST00000556483.5 ENST00000556580.4 ENST00000556699.1 |
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| CDS CAA 72 bp | AGTCTTGATCAGCTTGTCAATTTGATACTTCAGCTTTaGGTCCAAGGGACGAAGCTTTTCCAAAACCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: SLDQLVNLILQL*VQGTKLFQNRA Trigger: CGCACGGTTTTGGAAAAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000555128.5 |
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| CDS CAA 90 bp | TGTCACTGCAGTCTTGATCAGCTTGTCAATTTGATACTTCAGCTTTaGGTCCAAGGGACGAAGCTTTTCCAAAACCTACAACATGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: CHCSLDQLVNLILQL*VQGTKLFQNLQHGS Trigger: ACTACCATGTTGTAGGTTTTGGAAAAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACTGCAGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553336.5 ENST00000553439.5 ENST00000556022.3 |
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| CDS CCA 72 bp | AGCTTCTGTTTCATCATAATGTACTGGAACCAAGCGTaGAGGAACATATTTCTTAGACACTCCCTTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SFCFIIMYWNQA*RNIFLRHSLHR Trigger: TCTGTGAAGGGAGTGTCTAAGAAATATGTTCCTCCACGCTTGGTTCCAGTACATTATGATGAAACAGAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000397154.7 ENST00000408901.8 ENST00000553439.5 ENST00000556022.3 ENST00000556483.5 |
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| CDS CCA 72 bp | TTGCTTTGTCTTCCCTCTAGACTTCAGCACAGAAACTaGATCATATTTATGTTTGAAGCTCGAGCACTTAGG | + |
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Preference number: 6 (lower is better) Translates to: LLCLPSRLQHRN*IIFMFEARALR Trigger: CCTAAGTGCTCGAGCTTCAAACATAAATATGATCCAGTTTCTGTGCTGAAGTCTAGAGGGAAGACAAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000556378.5 ENST00000556953.1 |
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| CDS CAA 90 bp | AATGAAAGAACTACTGAGAACATTAAGTCAGGGGATGCTTACTGTTaGAGTACATCTTACCTTTTCTGTAGGATAGGCACCAGCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: NERTTENIKSGDAYC*STSYLFCRIGTSLN Trigger: GTTCAAGCTGGTGCCTATCCTACAGAAAAGGTAAGATGTACTCAAACAGTAAGCATCCCCTGACTTAATGTTCTCAGTAGTTCTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556378.5 ENST00000556953.1 |
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| CDS CAA 72 bp | AGTCTTGATCAGCTTGTCAATTTGATACTTCAGCTTTaGGTCCAAGGGACGAAGCTTTTCCAAAACCTACAA | + |
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Preference number: 6 (lower is better) Translates to: SLDQLVNLILQL*VQGTKLFQNLQ Trigger: TTGTAGGTTTTGGAAAAGCTTCGTCCCTTGGACCAAAAGCTGAAGTATCAAATTGACAAGCTGATCAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553336.5 ENST00000553439.5 ENST00000556022.3 |
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| CDS TCA 72 bp | ATGGTAATAAGCCCCACATACATTTTGCTGAAAGCATaGAAGTCACATCCTACTACAACCATATCTCAACCT | + |
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Preference number: 6 (lower is better) Translates to: MVISPTYILLKA*KSHPTTTISQP Trigger: AGGTTGAGATATGGTTGTAGTAGGATGTGACTTTCATGCTTTCAGCAAAATGTATGTGGGGCTTATTACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556103.1 |
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| CDS GCA 72 bp | CAAAATGAAGCACACACCAGAGTCCCTATATTAAGGTaGCACATAAGGCACCTAAAATATGTACAAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: QNEAHTRVPILR*HIRHLKYVQSR Trigger: TCTACTTTGTACATATTTTAGGTGCCTTATGTGGCACCTTAATATAGGGACTCTGGTGTGTGCTTCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553336.5 ENST00000553439.5 ENST00000556022.3 |
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