Pregenerated sensors for NFU1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169599Ensembl transcript IDs: ENST00000303698.7, ENST00000394305.5, ENST00000474230.5, ENST00000484177.5
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTCTCTCCATAAGGCCATaGTTTTTGGTTGAGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: HTSLHSLIISLHKAMLFGLSIRP*FLVENH Trigger: GTGATTCTCAACCAAAAAGCATGGCCTTATGGAGAG...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS-3UTR TCA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTTCATCATCCATAACCTaGAATTCTGTGGGTTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: HTSLHSLIISLHKAMLFGSSSIT*NSVGWK Trigger: TTTCCAACCCACAGAATTTCAGGTTATGGATGATGA...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS-3UTR GCA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTGTTTCAGCTGTACAATaGCATCTTCAAAGCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: HTSLHSLIISLHKAMLFGVSAVQ*HLQSLC Trigger: ACAAAGGCTTTGAAGATGGCATTGTACAGCTGAAAC...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS-3UTR GCA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTTTACTGATGACAAGGTaGTGTGTTATACTCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: HTSLHSLIISLHKAMLFGLLMTR*CVILLF Trigger: GAACAGGAGTATAACACAGCACCTTGTCATCAGTAA...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| 3UTR CAA 72 bp | TTGGAAATTTCTAATTTCCACACATCCCTTCACTCCTaGATAATCTCTCTCCATAAGGCCATGCTTTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LEISNFHTSLHS*IISLHKAMLFG Trigger: ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTGGAAATTAGAAATTTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS CCA 90 bp | GACAGAACCACGAAAGATCTGCGCAGCCGCAGGCTGGCCGGTAGCTaGGCGGGCACTGGGAAGAGCCCACCCTACCGGCTGCGGGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: DRTTKDLRSRRLAGS*AGTGKSPPYRLRAV Trigger: GACCGCCCGCAGCCGGTAGGGTGGGCTCTTCCCAGTGCCCGCCCAGCTACCGGCCAGCCTGCGGCTGCGCAGATCTTTCGTGGTTCTGTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS GCA 90 bp | GAAGAGCCCACCCTACCGGCTGCGGGCGGTCCTGCTGCGGATAAGTaGGGTGGCCTACGCGCCGAGGTTTGCAGGCTACTGCGTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: EEPTLPAAGGPAADK*GGLRAEVCRLLRHP Trigger: AGGGTGACGCAGTAGCCTGCAAACCTCGGCGCGTAGGCCACCGCACTTATCCGCAGCAGGACCGCCCGCAGCCGGTAGGGTGGGCTCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS CCA 90 bp | AGGGTCTCCCTGACAGAACCACGAAAGATCTGCGCAGCCGCAGGCTaGCCGGTAGCTGGGCGGGCACTGGGAAGAGCCCACCCTACCGGC | + |
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Preference number: 5 (lower is better) Translates to: RVSLTEPRKICAAAG*PVAGRALGRAHPTG Trigger: GCCGGTAGGGTGGGCTCTTCCCAGTGCCCGCCCAGCTACCGGCCAGCCTGCGGCTGCGCAGATCTTTCGTGGTTCTGTCAGGGAGACCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS CCA 90 bp | AGAACCCGCCTCGAGAGAGGGTCTGCAAGGCGGCGACCGCTCCGCTaGCTAAGCCCAGCGGCACACCTATTCGGAGCTCCAGGCTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: RTRLERGSARRRPLR*LSPAAHLFGAPGSS Trigger: TGACGAGCCTGGAGCTCCGAATAGGTGTGCCGCTGGGCTTAGCCAGCGGAGCGGTCGCCGCCTTGCAGACCCTCTCTCGAGGCGGGTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303698.7 ENST00000394305.5 ENST00000484177.5 |
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| CDS GCA 90 bp | GGCGGTCCTGCTGCGGATAAGTGCGGTGGCCTACGCGCCGAGGTTTaGAGGCTACTGCGTCACCCTGACCAAGAGAGGCCGGGGAACCTT | + |
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Preference number: 5 (lower is better) Translates to: GGPAADKCGGLRAEV*RLLRHPDQERPGNL Trigger: AAGGTTCCCCGGCCTCTCTTGGTCAGGGTGACGCAGTAGCCTGCAAACCTCGGCGCGTAGGCCACCGCACTTATCCGCAGCAGGACCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS GCA 90 bp | AGTCCGGAGTGCCTAAGGGTCTCCCTGACAGAACCACGAAAGATCTaGGCAGCCGCAGGCTGGCCGGTAGCTGGGCGGGCACTGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SPECLRVSLTEPRKI*AAAGWPVAGRALGR Trigger: TCTTCCCAGTGCCCGCCCAGCTACCGGCCAGCCTGCGGCTGCGCAGATCTTTCGTGGTTCTGTCAGGGAGACCCTTAGGCACTCCGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS-3UTR CAA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTGGCCATGCTTTTTGGTaGAGAATCACTGCAGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: HTSLHSLIISLHKAMLFGGHAFW*RITAVR Trigger: TCTCACTGCAGTGATTCTCAACCAAAAAGCATGGCC...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS-3UTR CAA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTATAAGGCCATGCTTTTaGGTTGAGAATCACTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HTSLHSLIISLHKAMLFGIRPCF*VENHCS Trigger: ACTGCAGTGATTCTCAACCAAAAAGCATGGCCTTAT...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS-3UTR CAA 90 bp | CACACATCCCTTCACTCCTTGATAATCTCTCTCCATAAGGCCATGCTTTTTGGTACATCCCTTCACTCCTaGATAATCTCTCTCCATAAG | + |
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Preference number: 5 (lower is better) Translates to: HTSLHSLIISLHKAMLFGTSLHS*IISLHK Trigger: CTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGT...ACCAAAAAGCATGGCCTTATGGAGAGAGATTATCAAGGAGTGAAGGGATGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474230.5 |
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| CDS CCA 72 bp | ACGAAAGATCTGCGCAGCCGCAGGCTGGCCGGTAGCTaGGCGGGCACTGGGAAGAGCCCACCCTACCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TKDLRSRRLAGS*AGTGKSPPYRL Trigger: CAGCCGGTAGGGTGGGCTCTTCCCAGTGCCCGCCCAGCTACCGGCCAGCCTGCGGCTGCGCAGATCTTTCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS GCA 72 bp | ACCCTACCGGCTGCGGGCGGTCCTGCTGCGGATAAGTaGGGTGGCCTACGCGCCGAGGTTTGCAGGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: TLPAAGGPAADK*GGLRAEVCRLL Trigger: CAGTAGCCTGCAAACCTCGGCGCGTAGGCCACCGCACTTATCCGCAGCAGGACCGCCCGCAGCCGGTAGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS CCA 72 bp | CTCGAGAGAGGGTCTGCAAGGCGGCGACCGCTCCGCTaGCTAAGCCCAGCGGCACACCTATTCGGAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LERGSARRRPLR*LSPAAHLFGAP Trigger: TGGAGCTCCGAATAGGTGTGCCGCTGGGCTTAGCCAGCGGAGCGGTCGCCGCCTTGCAGACCCTCTCTCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303698.7 ENST00000394305.5 ENST00000484177.5 |
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| CDS GCA 72 bp | GCTGCGGATAAGTGCGGTGGCCTACGCGCCGAGGTTTaGAGGCTACTGCGTCACCCTGACCAAGAGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AADKCGGLRAEV*RLLRHPDQERP Trigger: CGGCCTCTCTTGGTCAGGGTGACGCAGTAGCCTGCAAACCTCGGCGCGTAGGCCACCGCACTTATCCGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS GCA 72 bp | TGCCTAAGGGTCTCCCTGACAGAACCACGAAAGATCTaGGCAGCCGCAGGCTGGCCGGTAGCTGGGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CLRVSLTEPRKI*AAAGWPVAGRA Trigger: TGCCCGCCCAGCTACCGGCCAGCCTGCGGCTGCGCAGATCTTTCGTGGTTCTGTCAGGGAGACCCTTAGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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| CDS GCA 72 bp | AGTGCGGTGGCCTACGCGCCGAGGTTTGCAGGCTACTaGGTCACCCTGACCAAGAGAGGCCGGGGAACCTTT | + |
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Preference number: 6 (lower is better) Translates to: SAVAYAPRFAGY*VTLTKRGRGTF Trigger: AAAGGTTCCCCGGCCTCTCTTGGTCAGGGTGACGCAGTAGCCTGCAAACCTCGGCGCGTAGGCCACCGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394305.5 |
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