RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFRKB (Homo sapiens)

Ensembl gene IDs: ENSG00000170322

Ensembl transcript IDs: ENST00000446488.7, ENST00000524746.5, ENST00000524794.5, ENST00000526884.1, ENST00000526940.1, ENST00000529319.5, ENST00000530278.5, ENST00000531318.1, ENST00000531755.5, ENST00000532147.1, ENST00000532225.5, ENST00000682444.1

Found 753 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGCTGCTGGGTCCGCCACTCCCGCTCCTCAGGTGTGCGGGATGGTaGAGGGCGTTTCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCG +
Preference number: 1 (lower is better)
Translates to: ALLGPPLPLLRCAGW*RAFLPEGKGGATPP
Trigger: CGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGAAACGCCCTTCACCATCCCGCACACCTGAGGAGCGGGAGTGGCGGACCCAGCAGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
3UTR GCA 90 bp CCTTCAAGTAGCGCTGCTGGGTCCGCCACTCCCGCTCCTCAGGTGTaGGGGATGGTGAAGGGCGTTTCTGCCGGAAGGGAAGGGCGGGGC +
Preference number: 1 (lower is better)
Translates to: PSSSAAGSATPAPQV*GMVKGVSAGREGRG
Trigger: GCCCCGCCCTTCCCTTCCGGCAGAAACGCCCTTCACCATCCCGCACACCTGAGGAGCGGGAGTGGCGGACCCAGCAGCGCTACTTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
3UTR GCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTaGCATCACCCCTCGCCTGGCTGCCTTGAACAGGCAAGCTTAAAA +
Preference number: 1 (lower is better)
Translates to: MARGSRIQATNPGHR*HHPSPGCLEQASLK
Trigger: TTTTAAGCTTGCCTGTTCAAGGCAGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR CCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATaGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTT +
Preference number: 1 (lower is better)
Translates to: RPWNPGVNLSQGAPL*HVAAESRPRIQATV
Trigger: AACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR TCA 90 bp CATCACCCCTCGCCTGGCTGCCTTGAACAGGCAAGCTTAAAACAATaGTGCAACCTCCCTGGTCCCTTCTCAGCCAGGACAGACCAGGCA +
Preference number: 1 (lower is better)
Translates to: HHPSPGCLEQASLKQ*CNLPGPFSARTDQA
Trigger: TGCCTGGTCTGTCCTGGCTGAGAAGGGACCAGGGAGGTTGCATCATTGTTTTAAGCTTGCCTGTTCAAGGCAGCCAGGCGAGGGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR GCA 90 bp GGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTaGTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCA +
Preference number: 1 (lower is better)
Translates to: GREQTLEPWSEPFSG*STMARGSRIQATNP
Trigger: TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR GCA 90 bp GGCGGCCACAATCAAGATCCCAACACCCCTATCTTTAAGAGGCAGTaGCAAGCGAATCCCATTTCAGGGGACCCACTCTACCTCGCTGCC +
Preference number: 1 (lower is better)
Translates to: GGHNQDPNTPIFKRQ*QANPISGDPLYLAA
Trigger: GGCAGCGAGGTAGAGTGGGTCCCCTGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGATAGGGGTGTTGGGATCTTGATTGTGGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR CCA 90 bp ACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTAAGCCTTCCCTaGGGGTCTTACTCTCAGAACTCTGGCTTGTTGGACGTAACTGGT +
Preference number: 1 (lower is better)
Translates to: TSLFAVCTLQLVSLP*GSYSQNSGLLDVTG
Trigger: ACCAGTTACGTCCAACAAGCCAGAGTTCTGAGAGTAAGACCCCCAGGGAAGGCTTACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR TCA 90 bp CCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTaGACTGCAACAAAGTTTCTGCTGCAAAAGCAGCACCTCTGCTGT +
Preference number: 1 (lower is better)
Translates to: PGLQLLLWSRAEGIL*TATKFLLQKQHLCC
Trigger: ACAGCAGAGGTGCTGCTTTTGCAGCAGAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 90 bp TTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTaGAACAAAGTTTCTGCTGCAAAAGCAGCACCTCTGCTGTCCGTC +
Preference number: 1 (lower is better)
Translates to: FATLALEQSRRYTLN*NKVSAAKAAPLLSV
Trigger: GACGGACAGCAGAGGTGCTGCTTTTGCAGCAGAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR CCA 90 bp GCAATTTCAACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTaGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCAC +
Preference number: 1 (lower is better)
Translates to: AISTEYSPRLVESRP*NPGVNLSQGAPLWH
Trigger: GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGTTGAAATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR GCA 90 bp TCGCTGCCTACGATGAATTCCCATCTTACAGCCTCTCGATTACTATaGAGTTACCAAGCTGGCTACCACCTTACTAAGATTCTTGCCATT +
Preference number: 1 (lower is better)
Translates to: SLPTMNSHLTASRLL*SYQAGYHLTKILAI
Trigger: AATGGCAAGAATCTTAGTAAGGTGGTAGCCAGCTTGGTAACTGCATAGTAATCGAGAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR TCA 90 bp GGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCTTCGAATCTaGAAGCAGCCACAGATAATACAAACACAAATTGGTCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: GHPVSMSTTQFCLRI*KQPQIIQTQIGLGC
Trigger: ACAGCCCAGACCAATTTGTGTTTGTATTATCTGTGGCTGCTTTCAGATTCGAAGGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCATGATGCAACCTCCCTaGTCCCTTCTCAGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAMMQPP*SLLSQD
Trigger: GTCCTGGCTGAGAAGGGACCAGGGAGGTTGCATCAT...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR-3UTR TCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTCTCTGGACGTCCATGTaGACAGGCTTGCCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGLWTSM*TGLPRR
Trigger: CCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGAG...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTAATCCAGGCCACCGTTaGCATCACCCCTCGCCTGGC +
Preference number: 2 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARNPGHR*HHPSPG
Trigger: GCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATT...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR-3UTR TCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAGCAAGCTTAAAACAATaGTGCAACCTCCCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPASLKQ*CNLPGP
Trigger: GGGACCAGGGAGGTTGCATCATTGTTTTAAGCTTGC...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR-3UTR TCA 90 bp GTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAGGACTAGGAGAACGTAGAGCTCGGAAGCCATaGGCTGAGATCTTCAAAAGA +
Preference number: 2 (lower is better)
Translates to: VVESVGTTRRGTAGLGERRARKP*AEIFKR
Trigger: TCTTTTGAAGATCTCAGCTCATGGCTTCCGAGCTCT...ACGTTCTCCTAGTCCTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
3UTR-3UTR CCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAATGATGCAACCTCCCTaGTCCCTTCTCAGCCAGGAC +
Preference number: 2 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEMMQPP*SLLSQD
Trigger: GTCCTGGCTGAGAAGGGACCAGGGAGGTTGCATCAT...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR-3UTR CCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGAGGACAGACCAGGCATaGTCTTTCACGGAAGCCATC +
Preference number: 2 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVRTDQA*SFTEAI
Trigger: GATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCT...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR-3UTR TCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTGCCCAAGTTTGTATTTaGGAAAGATGTACAACAGGT +
Preference number: 2 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGAQVCI*ERCTTG
Trigger: ACCTGTTGTACATCTTTCTCAAATACAAACTTGGGC...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR-3UTR GCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAAGCAGCACCTCTaGTGTCCGTCCCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQQKQHL*CPSPPL
Trigger: GAGAGGAGGGGACGGACAGCAGAGGTGCTGCTTTTG...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR-3UTR CCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCAGGACAGACCAGGCATaGTCTTTCACGGAAGCCATC +
Preference number: 2 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFRTDQA*SFTEAI
Trigger: GATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCT...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR-3UTR CCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCCAGACCTTGGAACCCTaGAGTGAACCTTTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFQTLEP*SEPFSG
Trigger: CCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR CAA 90 bp CTGGTAAGCCTTCCCTGGGGGTCTTACTCTCAGAACTCTGGCTTGTaGGACGTAACTGGTAATTCCTGCAATTTCAACAGAATATTCTCC +
Preference number: 2 (lower is better)
Translates to: LVSLPWGSYSQNSGL*DVTGNSCNFNRIFS
Trigger: GGAGAATATTCTGTTGAAATTGCAGGAATTACCAGTTACGTCCAACAAGCCAGAGTTCTGAGAGTAAGACCCCCAGGGAAGGCTTACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 72 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTaGCATCACCCCTCGCCTGGCTGCCTTGAACAGGCA +
Preference number: 3 (lower is better)
Translates to: GSRIQATNPGHR*HHPSPGCLEQA
Trigger: TGCCTGTTCAAGGCAGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR TCA 72 bp CCCCTCCTCTCTGTCCACTGGCTCTGGACGTCCATGTaGACAGGCTTGCCAAGAAGGACAAAGTGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: PLLSVHWLWTSM*TGLPRRTKWAG
Trigger: ACCTGCCCACTTTGTCCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGAGCCAGTGGACAGAGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 72 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTaGTCCACTATGGCACGTGGCAGCAGAATCCAGGCC +
Preference number: 3 (lower is better)
Translates to: QTLEPWSEPFSG*STMARGSRIQA
Trigger: GGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR CCA 72 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATaGCACGTGGCAGCAGAATCCAGGCCACGAATCCAG +
Preference number: 3 (lower is better)
Translates to: NPGVNLSQGAPL*HVAAESRPRIQ
Trigger: CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR GCA 72 bp ATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTaGACTCTGCAACTGGTAAGCCTTCCCTGGGGGTCT +
Preference number: 3 (lower is better)
Translates to: IQSSWRTSLFAV*TLQLVSLPWGS
Trigger: AGACCCCCAGGGAAGGCTTACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 72 bp GAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCTaGTGCAAAAGCAGCACCTCTGCTGTCCGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: EQKVYSELQQSF*CKSSTSAVRPL
Trigger: GAGGGGACGGACAGCAGAGGTGCTGCTTTTGCAGCAGAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR TCA 72 bp CATTTCAGGGGACCCACTCTACCTCGCTGCCTACGATaGATTCCCATCTTACAGCCTCTCGATTACTATGCA +
Preference number: 3 (lower is better)
Translates to: HFRGPTLPRCLR*IPILQPLDYYA
Trigger: TGCATAGTAATCGAGAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 72 bp TTACAAAAACAAATGGCCAGCCCCAAGGGCCTGGTTTaGAACTCTTGCTCTGGAGCAGAGCAGAAGGTATAC +
Preference number: 3 (lower is better)
Translates to: LQKQMASPKGLV*NSCSGAEQKVY
Trigger: GTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCCATTTGTTTTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 72 bp CTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTaGAACAAAGTTTCTGCTGCAAAAGCAGCACCTCTG +
Preference number: 3 (lower is better)
Translates to: LALEQSRRYTLN*NKVSAAKAAPL
Trigger: CAGAGGTGCTGCTTTTGCAGCAGAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR-3UTR CAA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAGAATATTCTCCTAGATaGGTAGAGAGCAGACCTTGG +
Preference number: 3 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQEYSPR*VESRPW
Trigger: CCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR TCA 72 bp CAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTaGACTGCAACAAAGTTTCTGCTGCAAAAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: QLLLWSRAEGIL*TATKFLLQKQH
Trigger: GTGCTGCTTTTGCAGCAGAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR GCA 72 bp ACGATGAATTCCCATCTTACAGCCTCTCGATTACTATaGAGTTACCAAGCTGGCTACCACCTTACTAAGATT +
Preference number: 3 (lower is better)
Translates to: TMNSHLTASRLL*SYQAGYHLTKI
Trigger: AATCTTAGTAAGGTGGTAGCCAGCTTGGTAACTGCATAGTAATCGAGAGGCTGTAAGATGGGAATTCATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR TCA 72 bp GTCTCTATGTCAACTACTCAATTCTGCCTTCGAATCTaGAAGCAGCCACAGATAATACAAACACAAATTGGT +
Preference number: 3 (lower is better)
Translates to: VSMSTTQFCLRI*KQPQIIQTQIG
Trigger: ACCAATTTGTGTTTGTATTATCTGTGGCTGCTTTCAGATTCGAAGGCAGAATTGAGTAGTTGACATAGAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp TTCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACCGTGGTTGAAAGTGTaGGCACCACCCGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FCRKGRAGPLRRAISSRSPWLKV*APPAGA
Trigger: TGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGG...TGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTGCCACCGAGGCCCCTTaGTTGGCGTGGGTTGCAACG +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAATEAP*LAWVAT
Trigger: CGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGC...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGAACTGCTGCTGGGAGTTaGGGTAGCGCTTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: EGKGGATPPGHLQQITPGTAAGS*GSACTV
Trigger: CACAGTACAAGCGCTACCTCAACTCCCAGCAGCAGT...TCCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCACACAACCGTGGTGCTaGCAGGGACCTGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVATQPWC*QGPAAR
Trigger: CCGTGCGGCAGGTCCCTGTCAGCACCACGGTTGTGT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTGCCGGCCCTCCCGACTaGTGGGGAACAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGAGPPD*WGTAGR
Trigger: CCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGC...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTCCGTGGTTGAAAGTGTaGGCACCACCCGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPPWLKV*APPAGA
Trigger: TGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGG...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCCGTGGTTGAAAGTGTaGGCACCACCCGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWPWLKV*APPAGA
Trigger: TGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGG...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCAGTTCCAGACCCACTaGCCACCGAGGCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSQFQTH*PPRPLA
Trigger: AGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTG...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGGCGTTTCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCGCTTGTACTGTGACTTaGAGCATAACTGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: GRFCRKGRAGPLRRAISSACTVT*SITAGT
Trigger: AGTACCGGCAGTTATGCTTCAAGTCACAGTACAAGC...GCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGAAACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCCGGAGAGGGGGCCTGTaGGAGAGGTGCGACCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILRRGGL*ERCDPF
Trigger: GAAGGGGTCGCACCTCTCTCACAGGCCCCCTCTCCG...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTACACAACCGTGGTGCTaGCAGGGACCTGCCGCACGG +
Preference number: 4 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGTQPWC*QGPAAR
Trigger: CCGTGCGGCAGGTCCCTGTCAGCACCACGGTTGTGT...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCGAGCGCAGCAGGGAGTaGTCCCGAGCCTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAERSRE*SRALLS
Trigger: GCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTC...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGCTGGAACCCGGATCTaGGGTCCTGCTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPAGTRI*GPAGIC
Trigger: ACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGC...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAACCGTGAGCCCTGTCTaGCCGGGTCCAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPTVSPV*PGPGRC
Trigger: GCAGCGGCCTGGACCCGGGCAGACAGGGCTCACGGT...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCAGGGACAGTCTGGATaGGCACCTGTGTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWQGQSG*APVWPD
Trigger: GTCAGGCCACACAGGTGCGCATCCAGACTGTCCCTG...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCAATCCAGGCCACCGTTaGCATCACCCCTCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVANPGHR*HHPSPG
Trigger: GCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCTGTGTGGCAGTGGCTaGAACCCGGATCTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQALCGSG*NPDLRS
Trigger: GGACCGCAGATCCGGGTTCCAGCCACTGCCACACAG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGTCACAGGGCTGGCTGTaGCAGGGAGACTTGTCACCG +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLSQGWL*QGDLSP
Trigger: CGGTGACAAGTCTCCCTGCCACAGCCAGCCCTGTGA...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCCCCTTGCTTGGCGTaGGTTGCAACGGTGATGGTC +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLAPCLA*VATVMV
Trigger: GACCATCACCGTTGCAACCCACGCCAAGCAAGGGGC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGGCAACTTCCCAGCCTaGGACGTGGACACAACCGTG +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWGNFPA*DVDTTV
Trigger: CACGGTTGTGTCCACGTCCCAGGCTGGGAAGTTGCC...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGAAGCAATTTCATATCCGTGGTTaGAAGTGTGGGCACCACCCG +
Preference number: 4 (lower is better)
Translates to: EGRGHSAGPSPADHSGKQFHIRG*KCGHHP
Trigger: CGGGTGGTGCCCACACTTTCAACCACGGATATGAAA...TTGCTTCCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCAGAGAACCAGCTGTTaGGGGAGCTGGCTGGCGATG +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAQRTSC*GSWLAM
Trigger: CATCGCCAGCCAGCTCCCTCAACAGCTGGTTCTCTG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTCGTGCATGCGAAAGGTaGACGCCTTATGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLARACER*TPYGVG
Trigger: GCCAACCCCATAAGGCGTTCACCTTTCGCATGCACG...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCTTGATAGCAGGAATTaGCAGCGGAGAGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSLDSRN*QRRGGL
Trigger: CAGGCCCCCTCTCCGCTGGCAATTCCTGCTATCAAG...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCCGGCCCTCCCGACTaGTGGGGAACAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAAGPPD*WGTAGR
Trigger: CCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGC...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCCGGGTCCAGGCCGCTaGACAGTGGCTGCCGTAGTC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSPGPGR*TVAAVV
Trigger: GACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACACCGTGAGCCCTGTCTaGCCGGGTCCAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHTVSPV*PGPGRC
Trigger: GCAGCGGCCTGGACCCGGGCAGACAGGGCTCACGGT...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAATCCAGGCCACCGTTaGCATCACCCCTCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPNPGHR*HHPSPG
Trigger: GCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGGCGTTTCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCCAGTTTTCATATCCGTaGTTGAAAGTGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: GRFCRKGRAGPLRRAISSQFSYP*LKVWAP
Trigger: TGGTGCCCACACTTTCAACCACGGATATGAAAACTG...GCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGAAACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCTGGTCTGTGTGGCAGTaGCTGGAACCCGGATCTGCG +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAWSVWQ*LEPGSA
Trigger: CGCAGATCCGGGTTCCAGCCACTGCCACACAGACCA...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTTCCCAGGAGAACTCGTaGCTGGCTTACTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPSQENS*LAYSQG
Trigger: GCCCTGTGAGTAAGCCAGCCACGAGTTCTCCTGGGA...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACAGTTCCAGACCCACTaGCCACCGAGGCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPQFQTH*PPRPLA
Trigger: AGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTG...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGGGATGCGCACCTGTGTaGCCTGACCTTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSGCAPV*PDLAAE
Trigger: TTCAGCAGCAAGGTCAGGCCACACAGGTGCGCATCC...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTACTGCTGCTGGGAGTTaGGGTAGCGCTTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLATAAGS*GSACTV
Trigger: CACAGTACAAGCGCTACCTCAACTCCCAGCAGCAGT...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAGGTGTGCGGGATGGTaGAGGGCGTTTCTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPRCAGW*RAFLPE
Trigger: TTCCGGCAGAAACGCCCTTCACCATCCCGCACACCT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCACCCGGGCGGCAGCCTaGGAACTGGGTGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLTRAAA*ELGAVW
Trigger: CCAGACTGCACCCAGTTCTCAGGCTGCCGCCCGGGT...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAACCCGGGCGGCAGCCTaGGAACTGGGTGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAETRAAA*ELGAVW
Trigger: CCAGACTGCACCCAGTTCTCAGGCTGCCGCCCGGGT...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCGGAGACTTGTCACCGTaGGCCCTGTCTGCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIGDLSP*ALSARV
Trigger: GACCCGGGCAGACAGGGCTCACGGTGACAAGTCTCC...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCGTGGGTTGCAACGGTaGTGGTCTGGCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHRGLQR*WSGLLW
Trigger: CCAAAGCAGGCCAGACCATCACCGTTGCAACCCACG...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTCCTTCATTGGCTGGCTaGTCACAGAGAGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAPSLAG*SQRGEL
Trigger: CAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGG...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTTCATTGGCTGGCTaGTCACAGAGAGGGGAACTG +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSPSLAG*SQRGEL
Trigger: CAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGG...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTCTTGGAACCCTGGAGTaGACCTTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPLGTLE*TFLRVL
Trigger: GAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAG...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ACCCGCAGGGGCACCGCAGGACTAGGAGAACGTGCTGGAGAGCTCGGAAGCCATGGCCTCTTCATCAGATaGCAGGGCTGTGTCACCACA +
Preference number: 4 (lower is better)
Translates to: TRRGTAGLGERAGELGSHGLFIR*QGCVTT
Trigger: TGTGGTGACACAGCCCTGTCATCTGATGAAGAGGCC...ATGGCTTCCGAGCTCTCCAGCACGTTCTCCTAGTCCTGCGGTGCCCCTGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp CCTCAGGTGTGCGGGATGGTGAAGGGCGTTTCTGCCGGAAGGGAAGGGCGGGGCGACTTGAAGCATAACTaGCGGTACTTGACCACCTCG +
Preference number: 4 (lower is better)
Translates to: PQVCGMVKGVSAGREGRGDLKHN*RYLTTS
Trigger: CGAGGTGGTCAAGTACCGGCAGTTATGCTTCAAGTC...GCCCCGCCCTTCCCTTCCGGCAGAAACGCCCTTCACCATCCCGCACACCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCGACCCCTTCAGTACTaGTTAGCGGCTCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGRPLQY*LAARPG
Trigger: ACCTGGCCGAGCCGCTAAGCAGTACTGAAGGGGTCG...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTGCCGCTTTTGTTCACTaGCGATACAGGTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAAAFVH*RYRWRG
Trigger: TCCCCTCCACCTGTATCGGCAGTGAACAAAAGCGGC...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCCGGATCTGCGGTCCTaGTGGCATCTGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAPDLRS*WHLWQC
Trigger: ACATTGCCACAGATGCCAGCAGGACCGCAGATCCGG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTCCGGGTCCAGGCCGCTaGACAGTGGCTGCCGTAGTC +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARPGPGR*TVAAVV
Trigger: GACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGG...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCAGTCCCTGCACGATaGGGATCGTGGCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPPVPAR*GSWQLV
Trigger: AACCAGCTGCCACGATCCGCATCGTGCAGGGACTGG...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCTTGCTTGGCGTGGGTTaGAACGGTGATGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQALLGVG*NGDGLA
Trigger: GGCCAGACCATCACCGTTGCAACCCACGCCAAGCAA...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCTGACAGGGACCTaGCGCACGGTGGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHVLTGT*RTVGAP
Trigger: AGGAGCCCCCACCGTGCGGCAGGTCCCTGTCAGCAC...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGTGCTGACAGGGACCTaGCGCACGGTGGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARVLTGT*RTVGAP
Trigger: AGGAGCCCCCACCGTGCGGCAGGTCCCTGTCAGCAC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTGTTGGAGATGGGATaGAGGGACAGTCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWLLEMG*RDSLDA
Trigger: CGCATCCAGACTGTCCCTGCATCCCATCTCCAACAG...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCACCCCTCGCCTGGCTaGCTTGAACAGGCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAHPSPG*LEQASL
Trigger: TAAGCTTGCCTGTTCAAGGCAGCCAGGCGAGGGGTG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCAAAAGCAGCACCTCTaGTGTCCGTCCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAQKQHL*CPSPPL
Trigger: GAGAGGAGGGGACGGACAGCAGAGGTGCTGCTTTTG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGGTTACAGGTGTGACTaGGGTGGGTGGCATACTGGA +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWGYRCD*GGWHTG
Trigger: TCCAGTATGCCACCCACCCCAGTCACACCTGTAACC...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTGGGTGCAGTCTGGCTaGAAGCTGGGGAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAWVQSG*KLGKAL
Trigger: CAATGCTTTCCCCAGCTTCCAGCCAGACTGCACCCA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCCAGCAGAGCCAGAGTaGCTCACGACCCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVPAEPE*LTTRAA
Trigger: TGCCGCCCGGGTCGTGAGCCACTCTGGCTCTGCTGG...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTTCCTGCTGGCATCTGTaGCAATGTCTGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGSCWHL*QCLCRP
Trigger: GGGCCGGCACAGACATTGCCACAGATGCCAGCAGGA...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGGATCTGCGGTCCTGCTaGCATCTGTGGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSDLRSC*HLWQCL
Trigger: CAGACATTGCCACAGATGCCAGCAGGACCGCAGATC...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTCTGGGGCACTACTTTaGTCTGTGTGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLASGALL*SVWQWL
Trigger: CAGCCACTGCCACACAGACCAAAGTAGTGCCCCAGA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACTCACAGGGCTGGCTGTaGCAGGGAGACTTGTCACCG +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHSQGWL*QGDLSP
Trigger: CGGTGACAAGTCTCCCTGCCACAGCCAGCCCTGTGA...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAGGAGAACTCGTGGCTaGCTTACTCACAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQARRTRG*LTHRAG
Trigger: GCCAGCCCTGTGAGTAAGCCAGCCACGAGTTCTCCT...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACGATGCAGGGACAGTCTaGATGCGCACCTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHDAGTV*MRTCVA
Trigger: GGCCACACAGGTGCGCATCCAGACTGTCCCTGCATC...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGATGATGCAACCTCCCTaGTCCCTTCTCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLMMQPP*SLLSQD
Trigger: GTCCTGGCTGAGAAGGGACCAGGGAGGTTGCATCAT...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGATGATGCAACCTCCCTaGTCCCTTCTCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWMMQPP*SLLSQD
Trigger: GTCCTGGCTGAGAAGGGACCAGGGAGGTTGCATCAT...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGTTTTCATATCCGTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAGGAGGCAATCCTCCATaGTGCGCGTGCCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: AVFISVVESVGTTRRGTAGGNPP*CACHGH
Trigger: ATGGCCATGGCACGCGCATCATGGAGGATTGCCTCC...TGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp TCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACGCCATGTTGAGAGGCTaGCAACATCAAAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SAGREGRGHSAGPSPADHAMLRG*QHQRRS
Trigger: AGATCTTCTTTGATGTTGTCAGCCTCTCAACATGGC...GTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp TTCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACACTTCCTGCCATGTTaGGAGGCTGACAACATCAAA +
Preference number: 4 (lower is better)
Translates to: FCRKGRAGPLRRAISSRSHFLPC*EADNIK
Trigger: TTTGATGTTGTCAGCCTCTCAACATGGCAGGAAGTG...TGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp TCTGCCGGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTGGAGGTGTTCACGTTaGGAATCACTTAACACTTCC +
Preference number: 4 (lower is better)
Translates to: SAGREGRGHSAGPSPADHWRCSR*ESLNTS
Trigger: GGAAGTGTTAAGTGATTCTCAACGTGAACACCTCCA...GTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp GTTTTCATATCCGTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAGGAAGGTGTGCGGGATGGTaGAGGGCGTTTCTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: VFISVVESVGTTRRGTAGRCAGW*RAFLPE
Trigger: TTCCGGCAGAAACGCCCTTCACCATCCCGCACACCT...TCCTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR TCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTAGAGCTCGGAAGCCATaGGCTGAGATCCTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPRARKP*AEILFI
Trigger: GATGAAGAGGATCTCAGCTCATGGCTTCCGAGCTCT...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTTTCATATCCGTGGTTaGAAGTGTGGGCACCACCCG +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAFHIRG*KCGHHP
Trigger: CGGGTGGTGCCCACACTTTCAACCACGGATATGAAA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGTTCCAAGGCAAGGCTTaGGGTCTTCAAGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWFQGKA*GLQGAL
Trigger: AAGAGCCCCTTGAAGACCTCAAGCCTTGCCTTGGAA...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGCAGAGAACCAGCTGTTaGGGGAGCTGGCTGGCGATG +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQQRTSC*GSWLAM
Trigger: CATCGCCAGCCAGCTCCCTCAACAGCTGGTTCTCTG...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGTCAGGAGTCACTTTaGCCACAGTGGTACCTGTTG +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLGQESL*PQWYLL
Trigger: CAACAGGTACCACTGTGGTCAAAGTGACTCCTGACC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGCGACCCCTTCAGTACTaGTTAGCGGCTCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQRPLQY*LAARPG
Trigger: ACCTGGCCGAGCCGCTAAGCAGTACTGAAGGGGTCG...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACGTTTCTCCTCCCCCGTaGTGGGACGCACCACATAGT +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHVSPPP*WDAPHS
Trigger: ACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAAC...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGACAGACTCAAAGCCGTaGATGCGAAAGGTGAACGCC +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLTDSKP*MRKVNA
Trigger: GGCGTTCACCTTTCGCATGCACGGCTTTGAGTCTGT...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGAGCGCAGCAGGGAGTaGTCCCGAGCCTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSERSRE*SRALLS
Trigger: GCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTGTGGCAATGTCTGTaGCGGCCCTCCCGACTGCTG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSLWQCL*RPSRLL
Trigger: CAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGTGGCTGCCGTAGTCTaGGCTTTGACGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQVAAVV*ALTGTV
Trigger: CACTGTGCCCGTCAAAGCGCAGACTACGGCAGCCAC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCATCACTCCCAGTCCCTaGACGATGCGGATCGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGITPSP*TMRIVA
Trigger: TGCCACGATCCGCATCGTGCAGGGACTGGGAGTGAT...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGAAGGTCCGGGTGATCTaGCTGATGTTTCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSKVRVI*LMFPLL
Trigger: GAGAAGCGGAAACATCAGCCAGATCACCCGGACCTT...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCCAACTCAGCCCAGTTaGGGGCCGCAGAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIPTQPS*GPQRTS
Trigger: GCTGGTTCTCTGCGGCCCCCAACTGGGCTGAGTTGG...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTGTGTGGCAGTGGCTaGAACCCGGATCTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSLCGSG*NPDLRS
Trigger: GGACCGCAGATCCGGGTTCCAGCCACTGCCACACAG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGGTCTGTGTGGCAGTaGCTGGAACCCGGATCTGCG +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILWSVWQ*LEPGSA
Trigger: CGCAGATCCGGGTTCCAGCCACTGCCACACAGACCA...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAGCTTACTCACAGGGCTaGCTGTGGCAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPAYSQG*LWQGDL
Trigger: CAAGTCTCCCTGCCACAGCCAGCCCTGTGAGTAAGC...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACTCCCAGGAGAACTCGTaGCTGGCTTACTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHSQENS*LAYSQG
Trigger: GCCCTGTGAGTAAGCCAGCCACGAGTTCTCCTGGGA...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGATGCTGTTGCCTGTTTaGGGCTTCACACCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLMLLPV*GFTPSC
Trigger: GCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCAT...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTTGACTGTGGTAACCTaGGACTTGGCCAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLALTVVT*DLANVA
Trigger: GGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCGGGCACTGGCTGAACTaGCCTTGGCAGGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILGHWLN*PWQGYQ
Trigger: CTGATAGCCCTGCCAAGGCCAGTTCAGCCAGTGCCC...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGGTGCTTTTTCCCTTCTaGTCAGCCACACTCACGCCA +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSVLFPF*SATLTP
Trigger: TGGCGTGAGTGTGGCTGACCAGAAGGGAAAAAGCAC...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCGCACGATGCGGATCGTaGCAGCTGGTTTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAARCGS*QLVLLL
Trigger: CAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGC...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGACACCGCTGAAGTATaGACAGTTCCAGACCCACTG +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLDTAEV*TVPDPL
Trigger: CAGTGGGTCTGGAACTGTCCATACTTCAGCGGTGTC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGCTCTTGCCCTTCATTaGCTGGCTGATCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPALALH*LADHRE
Trigger: CTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGC...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTAGGACAGACCAGGCATaGTCTTTCACGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLARTDQA*SFTEAI
Trigger: GATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCT...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGCTGGTAAGCCTTCCCTaGGGGTCTTACTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLLVSLP*GSYSQN
Trigger: GTTCTGAGAGTAAGACCCCCAGGGAAGGCTTACCAG...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCATAGGAAGGCTAGCCTaGCTCTCCAGCAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAIGRLA*LSSSKI
Trigger: GATCTTGCTGCTGGAGAGTCAGGCTAGCCTTCCTAT...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCGCTCCCGAGCCTTGTTaGGCGAGGTCTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILAPEPC*ARSPCQ
Trigger: TTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGC...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTGGGGGTTACAGGTGTaGCTGGGGTGGGTGGCATAC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIWGLQV*LGWVAY
Trigger: GTATGCCACCCACCCCAGTCACACCTGTAACCCCCA...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACCTTGGCATCTGTGGTaGTGGAAGAGGGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPPWHLW*WKRAAD
Trigger: GTCTGCCGCCCTCTTCCATCACCACAGATGCCAAGG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCAGGTGTGCGGGATGGTGAAGGGCGTTTCTGCCGGAAGGGAAGGGCGGGGCCAAGAGCTCGGAAGCCATaGGCTGAGATCTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SGVRDGEGRFCRKGRAGPRARKP*AEIFKR
Trigger: TCTTTTGAAGATCTCAGCTCATGGCTTCCGAGCTCT...TGGCCCCGCCCTTCCCTTCCGGCAGAAACGCCCTTCACCATCCCGCACACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGACTTGAAGCATAACTaGCGGTACTTGACCACCTCG +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWDLKHN*RYLTTS
Trigger: CGAGGTGGTCAAGTACCGGCAGTTATGCTTCAAGTC...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAGGACTAGGAGAACGTaGTGGAGAGCTCGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPRTRRT*WRARKP
Trigger: TGGCTTCCGAGCTCTCCAGCACGTTCTCCTAGTCCT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCAGTTCACAGATCTCTaGCCGTGTGCCTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWQFTDL*PCAFSI
Trigger: AATGGAGAAGGCACACGGGCAGAGATCTGTGAACTG...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGAGCTGCAGCTGCTTGTaGTTGGTGAATCCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLSCSCL*LVNPLK
Trigger: TTTGAGCGGATTCACCAAGCACAAGCAGCTGCAGCT...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCACTGTGGCAATGTCTGTaGCGGCCCTCCCGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSLWQCL*RPSRLL
Trigger: CAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAG...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGCTGGAACCCGGATCTaGGGTCCTGCTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPAGTRI*GPAGIC
Trigger: ACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGC...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCTGTCTTCAGGAAACTaGGGCAGAAACTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQALSSGN*GRNCWR
Trigger: CCTCCAGCAGTTTCTGCCCCAGTTTCCTGAAGACAG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGAAGCAAGAATTTGCTGTCTTCAGGAAACTaGGGCAGAAACTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GATPPGHLQQITPGSKNLLSSGN*GRNCWR
Trigger: CCTCCAGCAGTTTCTGCCCCAGTTTCCTGAAGACAG...CAAATTCTTGCTTCCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCATCTCCTCCCCCGTGCTaGGACGCACCACATAGTCAG +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVASPPPC*DAPHSQ
Trigger: CTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGA...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGAGTGCTGGTGACATCTaGTGCAAGAAACTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSSAGDI*CKKLGV
Trigger: GACTCCCAGTTTCTTGCACCAGATGTCACCAGCACT...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTCCTTGGATGGGGGCTTaGGTTTTTGCTGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAPWMGA*VFAEEL
Trigger: AAGCTCTTCAGCAAAAACCCAAGCCCCCATCCAAGG...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACTGTGACTGGGGTGGGTaGCATACTGGAGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHCDWGG*HTGVTE
Trigger: CTCAGTGACTCCAGTATGCCACCCACCCCAGTCACA...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTCTGGTTCTGAGACTGTaGAAGGGCCGCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLALVLRL*KGRFCS
Trigger: TGAACAAAAGCGGCCCTTCCACAGTCTCAGAACCAG...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCATGGGTGCAGTCTGGCTaGAAGCTGGGGAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPWVQSG*KLGKAL
Trigger: CAATGCTTTCCCCAGCTTCCAGCCAGACTGCACCCA...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCCCTCCCGACTGCTaGGGAACAGCAGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARGPPDC*GTAGRL
Trigger: TAGCCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCAGGAGAACTCGTGGCTaGCTTACTCACAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILRRTRG*LTHRAG
Trigger: GCCAGCCCTGTGAGTAAGCCAGCCACGAGTTCTCCT...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAATTCGCAGAACCGTCTaGCCCTTGGCATCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPIRRTV*PLASVV
Trigger: CACCACAGATGCCAAGGGCCAGACGGTTCTGCGAAT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCTGGTACCTGTTGGAGTaGATGAAGGGGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGWYLLE*MKGHWL
Trigger: CAGCCAGTGCCCCTTCATCCACTCCAACAGGTACCA...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCACTCACGCCAAGAGCTaGCATCAAGCGAAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVATHAKS*HQAKSR
Trigger: TCGGCTTTTCGCTTGATGCCAGCTCTTGGCGTGAGT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCGCCCCTTGCTTGGCGTaGGTTGCAACGGTGATGGTC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIAPCLA*VATVMV
Trigger: GACCATCACCGTTGCAACCCACGCCAAGCAAGGGGC...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTCAGCAGCATTCATACTaGGTAAGGACACCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPQQHSY*VRTPLK
Trigger: CTTCAGCGGTGTCCTTACCCAGTATGAATGCTGCTG...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCTTGCCCTTCATTGGCTaGCTGATCACAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVALPFIG*LITERG
Trigger: TCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAA...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCGCTCTTGCCCTTCATTaGCTGGCTGATCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAALALH*LADHRE
Trigger: CTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGC...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGATGCAGGGACAGTCTaGATGCGCACCTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSDAGTV*MRTCVA
Trigger: GGCCACACAGGTGCGCATCCAGACTGTCCCTGCATC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCGTTCCCTGTTGGAGATaGGATGCAGGGACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGVPCWR*DAGTVW
Trigger: CCAGACTGTCCCTGCATCCCATCTCCAACAGGGAAC...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGAGGCAATCCTCCATaGTGCGCGTGCCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARGGNPP*CACHGH
Trigger: ATGGCCATGGCACGCGCATCATGGAGGATTGCCTCC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGGAGGCAATCCTCCATaGTGCGCGTGCCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVGGNPP*CACHGH
Trigger: ATGGCCATGGCACGCGCATCATGGAGGATTGCCTCC...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTGTACTGTGACTTaGAGCATAACTGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLACTVT*SITAGT
Trigger: AGTACCGGCAGTTATGCTTCAAGTCACAGTACAAGC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCACTGCTGCTGGGAGTTaGGGTAGCGCTTGTACTGTG +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILTAAGS*GSACTV
Trigger: CACAGTACAAGCGCTACCTCAACTCCCAGCAGCAGT...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCCTCTTCATCAGATaGCAGGGCTGTGTCACCACA +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAILFIR*QGCVTT
Trigger: TGTGGTGACACAGCCCTGTCATCTGATGAAGAGGAT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAACAAGAGACAGAATGGTaGCGTAGGCAGGCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEQETEW*RRQAGR
Trigger: CCGACCGGCCTGCCTACGTCACCATTCTGTCTCTTG...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCGTACTGGATTGGAAGTaGCGTGTAAGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAVLDWK*RVRWQR
Trigger: TCTCTGCCACCTTACACGTCACTTCCAATCCAGTAC...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACGCGAAAAGCCGAACTTaGGGCTTCTGTTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHAKSRT*GFCWLE
Trigger: CTCAAGCCAACAGAAGCCTCAAGTTCGGCTTTTCGC...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCGACTTGAAGCATAACTaGCGGTACTTGACCACCTCG +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQADLKHN*RYLTTS
Trigger: CGAGGTGGTCAAGTACCGGCAGTTATGCTTCAAGTC...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTTTTCATATCCGTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAGGAAGGACTAGGAGAACGTaGTGGAGAGCTCGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VFISVVESVGTTRRGTAGRTRRT*WRARKP
Trigger: TGGCTTCCGAGCTCTCCAGCACGTTCTCCTAGTCCT...TCCTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTTGATAGCAGGAATTaGCAGCGGAGAGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSLDSRN*QRRGGL
Trigger: CAGGCCCCCTCTCCGCTGGCAATTCCTGCTATCAAG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTTTTTCTGGCTTTAGCTaGAGCTGCTTGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPFSGFS*SCLCLV
Trigger: CACCAAGCACAAGCAGCTGCAGCTAAAGCCAGAAAA...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGGAATGGCGGGCAATaGTGGTGTGGTGGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARGNGGQ*WCGGGY
Trigger: GTAACCCCCACCACACCAGCATTGCCCGCCATTCCC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCACCGGATCTGCGGTCCTaGTGGCATCTGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAPDLRS*WHLWQC
Trigger: ACATTGCCACAGATGCCAGCAGGACCGCAGATCCGG...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCCGCTGCACAGTGGCTaGCGTAGTCTGCGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVPLHSG*RSLRFD
Trigger: GTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGG...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACCCGCTGCACAGTGGCTaGCGTAGTCTGCGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHPLHSG*RSLRFD
Trigger: GTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGG...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCGGCTTCACACCAAGCTaGCCAGTGATTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIGFTPS*PVIATC
Trigger: GCAGGTGGCAATCACTGGGCAGCTTGGTGTGAAGCC...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAATCACTCCCAGTCCCTaGACGATGCGGATCGTGGCA +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPITPSP*TMRIVA
Trigger: TGCCACGATCCGCATCGTGCAGGGACTGGGAGTGAT...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCAGGGACAGTCTGGATaGGCACCTGTGTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVQGQSG*APVWPD
Trigger: GTCAGGCCACACAGGTGCGCATCCAGACTGTCCCTG...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGAACCTTTCTCAGGGTaGTCCACTATGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQEPFSG*STMARG
Trigger: GCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCTTGAGGAAGGGAAGCTaGACCAGGTCCTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLLRKGS*TRSSLP
Trigger: CGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAA...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp GAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTT +
Preference number: 4 (lower is better)
Translates to: EGKGGATPPGHLQQITPGGSVSI*SKESIV
Trigger: AACAATGGATTCCTTAGACCATATGCTGACAGATCC...TCCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAATGATGCGCGTGCCATaGCCATCTCCACACGGACCA +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAMMRVP*PSPHGP
Trigger: TGGTCCGTGTGGAGATGGCCATGGCACGCGCATCAT...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGTCTCGGAAAAGCTTCTaGGCAATGTGCAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSSRKSF*AMCRGF
Trigger: AAACCCTCTGCACATTGCCCAGAAGCTTTTCCGAGA...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTCCTCCCCCGTGCTaGGACGCACCACATAGTCAG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAESPPPC*DAPHSQ
Trigger: CTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGA...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAAACACGCCCTTCACTaGCCCCACCACAGACTCAAA +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPKHALH*PHHRLK
Trigger: TTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCCTTGGATGGGGGCTTaGGTTTTTGCTGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAPWMGA*VFAEEL
Trigger: AAGCTCTTCAGCAAAAACCCAAGCCCCCATCCAAGG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTACTGGACTTCACCTTaGATGGGGGCTTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAYWTSP*MGAWVF
Trigger: AAAAACCCAAGCCCCCATCCAAGGTGAAGTCCAGTA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAGCTCTCCTTGCTACTaGACTTCACCTTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPSSPCY*TSPWMG
Trigger: CCCCATCCAAGGTGAAGTCCAGTAGCAAGGAGAGCT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGTGTGACTGGGGTGGGTaGCATACTGGAGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQCDWGG*HTGVTE
Trigger: CTCAGTGACTCCAGTATGCCACCCACCCCAGTCACA...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGGTTACAGGTGTGACTaGGGTGGGTGGCATACTGGA +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQGYRCD*GGWHTG
Trigger: TCCAGTATGCCACCCACCCCAGTCACACCTGTAACC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCGTGGCCATTACTGTCTaGGGCACTACTTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAVAITV*GTTLVC
Trigger: ACAGACCAAAGTAGTGCCCCAGACAGTAATGGCCAC...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGTGGCTGAACTGGCCTTaGCAGGGCTATCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQWLNWP*QGYQLH
Trigger: ATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCA...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAGGGCACTGGCTGAACTaGCCTTGGCAGGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEGHWLN*PWQGYQ
Trigger: CTGATAGCCCTGCCAAGGCCAGTTCAGCCAGTGCCC...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAGGCAACTTCCCAGCCTaGGACGTGGACACAACCGTG +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSGNFPA*DVDTTV
Trigger: CACGGTTGTGTCCACGTCCCAGGCTGGGAAGTTGCC...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGGATGCGCACCTGTGTaGCCTGACCTTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSGCAPV*PDLAAE
Trigger: TTCAGCAGCAAGGTCAGGCCACACAGGTGCGCATCC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCAGGACAGACCAGGCATaGTCTTTCACGGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGRTDQA*SFTEAI
Trigger: GATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCT...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCCACTATGGCACGTaGCAGCAGAATCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSLHYGT*QQNPGH
Trigger: GTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACTCCACTATGGCACGTaGCAGCAGAATCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPLHYGT*QQNPGH
Trigger: GTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGGTGCTCCACTATaGCACGTGGCAGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIQGAPL*HVAAES
Trigger: GGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCCATGTTGAGAGGCTaGCAACATCAAAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLAMLRG*QHQRRS
Trigger: AGATCTTCTTTGATGTTGTCAGCCTCTCAACATGGC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTTGGAGGTGTTCACGTTaGGAATCACTTAACACTTCC +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPWRCSR*ESLNTS
Trigger: GGAAGTGTTAAGTGATTCTCAACGTGAACACCTCCA...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAGGAGCTGGCTGGCGATaGCTGCCAATCCAAAACTCG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEGAGWR*LPIQNS
Trigger: CGAGTTTTGGATTGGCAGTCATCGCCAGCCAGCTCC...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTCGTGCATGCGAAAGGTaGACGCCTTATGGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARRACER*TPYGVG
Trigger: GCCAACCCCATAAGGCGTTCACCTTTCGCATGCACG...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACGCTGCTTGTGCTTGGTaGATCCGCTCAAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHAACAW*IRSNSS
Trigger: AGAAGAGTTTGAGCGGATTCACCAAGCACAAGCAGC...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTGGGTTTTTGCTaGAGAGCTTTTCTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPGLGFC*RAFLAL
Trigger: TAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAGCC...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATACCTTGGCATCTGTGGTaGTGGAAGAGGGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIPWHLW*WKRAAD
Trigger: GTCTGCCGCCCTCTTCCATCACCACAGATGCCAAGG...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCACCATCATGTCCGGAGTaGTTCGCAGAACCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSPSCPE*FAEPSG
Trigger: GCCAGACGGTTCTGCGAATCACTCCGGACATGATGG...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCGGCCTCTTCATCAGATaGCAGGGCTGTGTCACCACA +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIGLFIR*QGCVTT
Trigger: TGTGGTGACACAGCCCTGTCATCTGATGAAGAGGCC...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCGGGAAGCAAGAATTTaGTTCAGCAGCCGATGGAAA +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAREARI*FSSRWK
Trigger: TTTCCATCGGCTGCTGAAGCAAATTCTTGCTTCCCG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAGGACTAGGAGAACGTCGGGAAGCAAGAATTTaGTTCAGCAGCCGATGGAAA +
Preference number: 4 (lower is better)
Translates to: VVESVGTTRRGTAGLGERREARI*FSSRWK
Trigger: TTTCCATCGGCTGCTGAAGCAAATTCTTGCTTCCCG...ACGTTCTCCTAGTCCTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAAGGACTAGGAGAACGTaGTGGAGAGCTCGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVARTRRT*WRARKP
Trigger: TGGCTTCCGAGCTCTCCAGCACGTTCTCCTAGTCCT...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGGGAATGGCGGGCAATaGTGGTGTGGTGGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIGNGGQ*WCGGGY
Trigger: GTAACCCCCACCACACCAGCATTGCCCGCCATTCCC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGCCGCTTTTGTTCACTaGCGATACAGGTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSAAFVH*RYRWRG
Trigger: TCCCCTCCACCTGTATCGGCAGTGAACAAAAGCGGC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCCAGTGATTGCCACCTaGTTGATGATGTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAPVIAT*LMMFCP
Trigger: AGGACAGAACATCATCAAGCAGGTGGCAATCACTGG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAGCTGCCCAGTGATTaGCACCTGCTTGATGATGTT +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAKLPSD*HLLDDV
Trigger: AACATCATCAAGCAGGTGGCAATCACTGGGCAGCTT...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTCTGAAGAGGCCACTGTaGTTTTTCCCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGLKRPL*FFPSGQ
Trigger: CTGACCAGAAGGGAAAAAGCACAGTGGCCTCTTCAG...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGTGATGGTCTGGCCTaGTTTGGGAGGCATCACTCC +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARGDGLA*FGRHHS
Trigger: GGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCACTGTTGGAGATGGGATaGAGGGACAGTCTGGATGCG +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVALLEMG*RDSLDA
Trigger: CGCATCCAGACTGTCCCTGCATCCCATCTCCAACAG...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTCACCCCTCGCCTGGCTaGCTTGAACAGGCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARHPSPG*LEQASL
Trigger: TAAGCTTGCCTGTTCAAGGCAGCCAGGCGAGGGGTG...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACATGATGCGCGTGCCATaGCCATCTCCACACGGACCA +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHMMRVP*PSPHGP
Trigger: TGGTCCGTGTGGAGATGGCCATGGCACGCGCATCAT...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGAAGCAAGAATTTGTCTCGGAAAAGCTTCTaGGCAATGTGCAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GATPPGHLQQITPGSKNLSRKSF*AMCRGF
Trigger: AAACCCTCTGCACATTGCCCAGAAGCTTTTCCGAGA...CAAATTCTTGCTTCCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGAAGGTCCGGGTGATCTaGCTGATGTTTCCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQKVRVI*LMFPLL
Trigger: GAGAAGCGGAAACATCAGCCAGATCACCCGGACCTT...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGTCATTATCTTGGGATTaGCCAAGCAACTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLSLSWD*PSNFHC
Trigger: GCAGTGGAAGTTGCTTGGCCAATCCCAAGATAATGA...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACGAGGGACAGGTGTTGTaGCATCTGAGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHEGQVL*HLSCLH
Trigger: ATGAAGACAGCTCAGATGCCACAACACCTGTCCCTC...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCGAGGGACAGGTGTTGTaGCATCTGAGCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGEGQVL*HLSCLH
Trigger: ATGAAGACAGCTCAGATGCCACAACACCTGTCCCTC...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGGACTTCACCTTGGATaGGGGCTTGGGTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQGLHLG*GLGFLL
Trigger: CAGCAAAAACCCAAGCCCCCATCCAAGGTGAAGTCC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCATCACTGAGGCTCATCTaGCTCTGCTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPSLRLI*LCSEGP
Trigger: TGGCCCTTCTGAGCAGAGCCAGATGAGCCTCAGTGA...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGAATGGCGGGCAATGCTaGTGTGGTGGGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVNGGQC*CGGGYR
Trigger: CCTGTAACCCCCACCACACCAGCATTGCCCGCCATT...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCGTCCCGAAGAGGTCCTaGGTCAATTTGACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGVPKRS*VNLTVV
Trigger: TACCACAGTCAAATTGACCCAGGACCTCTTCGGGAC...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCACTCACGCCAAGAGCTaGCATCAAGCGAAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: GPFSARTDQAWSFTEAILTHAKS*HQAKSR
Trigger: TCGGCTTTTCGCTTGATGCCAGCTCTTGGCGTGAGT...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGCACGATGCGGATCGTaGCAGCTGGTTTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSARCGS*QLVLLL
Trigger: CAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACTGGTCTGGCCTGCTTTaGGAGGCATCACTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHWSGLL*EASLPV
Trigger: GACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCA...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAGCAACGGTGATGGTCTaGCCTGCTTTGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEATVMV*PALGGI
Trigger: GATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGC...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTTTGCAACTCTTGCTCTaGAGCAGAGCAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPLQLLL*SRAEGI
Trigger: TATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAA...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGGAGCTGGCTGGCGATaGCTGCCAATCCAAAACTCG +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIGAGWR*LPIQNS
Trigger: CGAGTTTTGGATTGGCAGTCATCGCCAGCCAGCTCC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCTGGACGTCCATGTGAACAGGCTTGCCAAGAAGGACAAAGTGGGCAGGTAAAGCAAGAGACAGAATGGTaGCGTAGGCAGGCCGGTCGG +
Preference number: 4 (lower is better)
Translates to: SGRPCEQACQEGQSGQVKQETEW*RRQAGR
Trigger: CCGACCGGCCTGCCTACGTCACCATTCTGTCTCTTG...CTTTACCTGCCCACTTTGTCCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCTGCTTGTGCTTGGTaGATCCGCTCAAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQAACAW*IRSNSS
Trigger: AGAAGAGTTTGAGCGGATTCACCAAGCACAAGCAGC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAGCATACTGGAGTCACTaGGGCTCATCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEAYWSH*GSSGSA
Trigger: AGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGC...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAAGACTTAGCTGGTTCTaGGACTGTGGAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSRLSWF*DCGRAA
Trigger: AGCGGCCCTTCCACAGTCTCAGAACCAGCTAAGTCT...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAATGTGGCATTGTTGGTaGAGACACCAGAAGAACACC +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPMWHCW*RHQKNT
Trigger: GGTGTTCTTCTGGTGTCTTCACCAACAATGCCACAT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGTCAGGAGTCACTTTaGCCACAGTGGTACCTGTTG +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPGQESL*PQWYLL
Trigger: CAACAGGTACCACTGTGGTCAAAGTGACTCCTGACC...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACCTTGGAACCCTGGAGTaGACCTTTCTCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHLGTLE*TFLRVL
Trigger: GAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAG...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACCTCGCTGCCTACGATaGATTCCCATCTTACAGCCT +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPPRCLR*IPILQP
Trigger: AGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCCTCTGGACGTCCATGTaGACAGGCTTGCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLLWTSM*TGLPRR
Trigger: CCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGAG...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCTCACTTAACACTTCCTaGCATGTTGAGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQASLNTS*HVERLT
Trigger: TGTCAGCCTCTCAACATGGCAGGAAGTGTTAAGTGA...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTACAGACTCAAAGCCGTaGATGCGAAAGGTGAACGCC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSTDSKP*MRKVNA
Trigger: GGCGTTCACCTTTCGCATGCACGGCTTTGAGTCTGT...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGGCTTTAGCTGCAGCTaGTTGTGCTTGGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAGFSCS*LCLVNP
Trigger: CGGATTCACCAAGCACAAGCAGCTGCAGCTAAAGCC...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCATTATGGAGCTCTCCTTaGTACTGGACTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPLWSSP*YWTSPW
Trigger: CCAAGGTGAAGTCCAGTAGCAAGGAGAGCTCCATAA...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAAGGCTCATCTGGCTCTaGTCAGAAGGGCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSRLIWL*SEGPLL
Trigger: TAGCAGTGGCCCTTCTGAGCAGAGCCAGATGAGCCT...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCAGTGATTGCCACCTaGTTGATGATGTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGPVIAT*LMMFCP
Trigger: AGGACAGAACATCATCAAGCAGGTGGCAATCACTGG...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAAGCTGCCCAGTGATTaGCACCTGCTTGATGATGTT +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPKLPSD*HLLDDV
Trigger: AACATCATCAAGCAGGTGGCAATCACTGGGCAGCTT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCAATGAGCTTAGTGCCTaGTGGCATAGTTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVANELSA*WHSCED
Trigger: ATCCTCACAACTATGCCAGCAGGCACTAAGCTCATT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAGAACCTTTCTCAGGGTaGTCCACTATGGCACGTGGC +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSEPFSG*STMARG
Trigger: GCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTC...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCCCCAAGGGCCTGGTTTaGAACTCTTGCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLPKGLV*NSCSGA
Trigger: TGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGG...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCAGTTTTCATATCCGTaGTTGAAAGTGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAQFSYP*LKVWAP
Trigger: TGGTGCCCACACTTTCAACCACGGATATGAAAACTG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGCAAATGGAGAGAAACTaGAAGGAACAGCTCGACTTT +
Preference number: 4 (lower is better)
Translates to: AAESRPRIQATVAITPRLQMERN*KEQLDF
Trigger: AAAGTCGAGCTGTTCCTTCCAGTTTCTCTCCATTTG...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGTCTCTAGCCATAGCTaGAAGAGGGCAGCTAATTCC +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQVSSHS*KRAANS
Trigger: GGAATTAGCTGCCCTCTTCCAGCTATGGCTAGAGAC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACAGAAGGCCTGATCTTTaGTCTCTAGCCATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHRRPDL*SLAIAG
Trigger: TCCAGCTATGGCTAGAGACCAAAGATCAGGCCTTCT...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGAGTGCTGGTGACATCTaGTGCAAGAAACTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQSAGDI*CKKLGV
Trigger: GACTCCCAGTTTCTTGCACCAGATGTCACCAGCACT...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCAGCTCTCCTTGCTACTaGACTTCACCTTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRISSPCY*TSPWMG
Trigger: CCCCATCCAAGGTGAAGTCCAGTAGCAAGGAGAGCT...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCCAGCAGAGCCAGAGTaGCTCACGACCCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNPAEPE*LTTRAA
Trigger: TGCCGCCCGGGTCGTGAGCCACTCTGGCTCTGCTGG...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACGTTAGTGGCTGTGAGTaGAATGCTGTTGCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHVSGCE*NAVACL
Trigger: CAAACAGGCAACAGCATTCCACTCACAGCCACTAAC...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTTGACTGTGGTAACCTaGGACTTGGCCAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRILTVVT*DLANVA
Trigger: GGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAA...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATATGGTCTGGCCTGCTTTaGGAGGCATCACTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIWSGLL*EASLPV
Trigger: GACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCA...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAGTTCCCTGTTGGAGATaGGATGCAGGGACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSVPCWR*DAGTVW
Trigger: CCAGACTGTCCCTGCATCCCATCTCCAACAGGGAAC...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGAAGCTGTTCCCTGTTaGAGATGGGATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAEAVPC*RWDAGT
Trigger: TGTCCCTGCATCCCATCTCCAACAGGGAACAGCTTC...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCACAGTGGAGACTGCTTTaGAGGAGCCAGAAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAQWRLL*RSQKLF
Trigger: GAACAGCTTCTGGCTCCTCCAAAGCAGTCTCCACTG...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATACAGGGTGCTCCACTATaGCACGTGGCAGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIQGAPL*HVAAES
Trigger: GGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGTTTCATATCCGTGGTTaGAAGTGTGGGCACCACCCG +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVFHIRG*KCGHHP
Trigger: CGGGTGGTGCCCACACTTTCAACCACGGATATGAAA...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTCAGGTCCTCTGCCTCTaGTTTGATCGTTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPQVLCL*FDRFYF
Trigger: AAAATAAAAACGATCAAATCAGAGGCAGAGGACCTG...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCCGGAGAGGGGGCCTGTaGGAGAGGTGCGACCCCTTC +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFRRGGL*ERCDPF
Trigger: GAAGGGGTCGCACCTCTCTCACAGGCCCCCTCTCCG...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACTTCCAAGGCAAGGCTTaGGGTCTTCAAGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHFQGKA*GLQGAL
Trigger: AAGAGCCCCTTGAAGACCTCAAGCCTTGCCTTGGAA...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCACTACTGTATTTACCTaGGTGCTGGTGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGTTVFT*VLVTSG
Trigger: ACCAGATGTCACCAGCACTCAGGTAAATACAGTAGT...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGTACTGGATTGGAAGTaGCGTGTAAGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAVLDWK*RVRWQR
Trigger: TCTCTGCCACCTTACACGTCACTTCCAATCCAGTAC...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGCGAAAAGCCGAACTTaGGGCTTCTGTTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHAKSRT*GFCWLE
Trigger: CTCAAGCCAACAGAAGCCTCAAGTTCGGCTTTTCGC...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp ATATCCGTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAGGACTAGGATCACTTAACACTTCCTaGCATGTTGAGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ISVVESVGTTRRGTAGLGSLNTS*HVERLT
Trigger: TGTCAGCCTCTCAACATGGCAGGAAGTGTTAAGTGA...TCCTAGTCCTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACCCAGAGAGCCCTTCCTaGCAGCATTTACTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHPESPS*QHLLES
Trigger: TGACTCGAGTAAATGCTGGCAGGAAGGGCTCTCTGG...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATACTGGCTGGCGATGACTaGCAATCCAAAACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLILAGDD*QSKTRS
Trigger: GGAGCGAGTTTTGGATTGGCAGTCATCGCCAGCCAG...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTCTCCAGCAAGATACTaGAGGGCTGGTAGTACCAAC +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRISPARY*RAGSTN
Trigger: GTTGGTACTACCAGCCCTGCAGTATCTTGCTGGAGA...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCCAAGCAACTTCCACTaGTGGGTTTTCTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAPSNFH*WVFSLN
Trigger: ATTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TCTGGACGTCCATGTGAACAGGCTTGCCAAGAAGGACAAAGTGGGCAGGTAAAGGTTTCTCCTCCCCCGTaGTGGGACGCACCACATAGT +
Preference number: 4 (lower is better)
Translates to: SGRPCEQACQEGQSGQVKVSPPP*WDAPHS
Trigger: ACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAAC...CTTTACCTGCCCACTTTGTCCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGTTCACAGATCTCTaGCCGTGTGCCTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIQFTDL*PCAFSI
Trigger: AATGGAGAAGGCACACGGGCAGAGATCTGTGAACTG...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCTTTAGCTGCAGCTaGTTGTGCTTGGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARGFSCS*LCLVNP
Trigger: CGGATTCACCAAGCACAAGCAGCTGCAGCTAAAGCC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTTCATTGTTGCTCAGGTaGCTGTTTAGGAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSSLLLR*LFRRRS
Trigger: GCTCCGTCTCCTAAACAGGCACCTGAGCAACAATGA...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGTCTCATAATCATTGTTaGTCAGGTGCCTGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWSHNHC*SGACLG
Trigger: TCCTAAACAGGCACCTGAGCAACAATGATTATGAGA...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCGGACTTCACCTTGGATaGGGGCTTGGGTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLGLHLG*GLGFLL
Trigger: CAGCAAAAACCCAAGCCCCCATCCAAGGTGAAGTCC...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTGGTTCTGAGACTGTaGAAGGGCCGCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSLVLRL*KGRFCS
Trigger: TGAACAAAAGCGGCCCTTCCACAGTCTCAGAACCAG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAAATACATCCTTACCCTaGATGCGGAAGTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPNTSLP*MRKLVA
Trigger: AGCCACTAACTTCCGCATCCAGGGTAAGGATGTATT...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCAATACATCCTTACCCTaGATGCGGAAGTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGCSTMARGSRIQATNPGNTSLP*MRKLVA
Trigger: AGCCACTAACTTCCGCATCCAGGGTAAGGATGTATT...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGACACCGCTGAAGTATaGACAGTTCCAGACCCACTG +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARDTAEV*TVPDPL
Trigger: CAGTGGGTCTGGAACTGTCCATACTTCAGCGGTGTC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGAAGCTGTTCCCTGTTaGAGATGGGATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHEAVPC*RWDAGT
Trigger: TGTCCCTGCATCCCATCTCCAACAGGGAACAGCTTC...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACCAGTGGAGACTGCTTTaGAGGAGCCAGAAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHQWRLL*RSQKLF
Trigger: GAACAGCTTCTGGCTCCTCCAAAGCAGTCTCCACTG...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACACTTCCTGCCATGTTaGGAGGCTGACAACATCAAA +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPHFLPC*EADNIK
Trigger: TTTGATGTTGTCAGCCTCTCAACATGGCAGGAAGTG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCACTTCCTGCCATGTTaGGAGGCTGACAACATCAAA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSHFLPC*EADNIK
Trigger: TTTGATGTTGTCAGCCTCTCAACATGGCAGGAAGTG...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTAGGTGTGCGGGATGGTaGAGGGCGTTTCTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: NTILMENQPIRCVHSATGRCAGW*RAFLPE
Trigger: TTCCGGCAGAAACGCCCTTCACCATCCCGCACACCT...ACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCAGGTCCTCTGCCTCTaGTTTGATCGTTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAQVLCL*FDRFYF
Trigger: AAAATAAAAACGATCAAATCAGAGGCAGAGGACCTG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCAAGCTTAAAACAATaGTGCAACCTCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARASLKQ*CNLPGP
Trigger: GGGACCAGGGAGGTTGCATCATTGTTTTAAGCTTGC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACGGGAAGCAAGAATTTaGTTCAGCAGCCGATGGAAA +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPREARI*FSSRWK
Trigger: TTTCCATCGGCTGCTGAAGCAAATTCTTGCTTCCCG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTCAGTTCTACTTTATCTaGAGTTTTCATATCCGTGGT +
Preference number: 4 (lower is better)
Translates to: AESRPRIQATVAITPRLAQFYFI*SFHIRG
Trigger: ACCACGGATATGAAAACTGCAGATAAAGTAGAACTG...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCTTCCGCTTCTCGTGGTaGTTCTTTAACATTATCTTC +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAFRFSW*FFNIIF
Trigger: GAAGATAATGTTAAAGAAGCACCACGAGAAGCGGAA...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTCCAGCAAGATACTaGAGGGCTGGTAGTACCAAC +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAESPARY*RAGSTN
Trigger: GTTGGTACTACCAGCCCTGCAGTATCTTGCTGGAGA...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAACTGAAGAGGCCACTGTaGTTTTTCCCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAELKRPL*FFPSGQ
Trigger: CTGACCAGAAGGGAAAAAGCACAGTGGCCTCTTCAG...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCGCCACCGAGGCCCCTTaGTTGGCGTGGGTTGCAACG +
Preference number: 4 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSAATEAP*LAWVAT
Trigger: CGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGC...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACAACAACAGTGGAGACTaGTTTGGAGGAGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHNNSGD*FGGARS
Trigger: GCTTCTGGCTCCTCCAAAGCAGTCTCCACTGTTGTT...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAAACAACAGTGGAGACTaGTTTGGAGGAGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSNNSGD*FGGARS
Trigger: GCTTCTGGCTCCTCCAAAGCAGTCTCCACTGTTGTT...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGTCATTGTTGCTCAGGTaGCTGTTTAGGAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVSLLLR*LFRRRS
Trigger: GCTCCGTCTCCTAAACAGGCACCTGAGCAACAATGA...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCTCTCATAATCATTGTTaGTCAGGTGCCTGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QGAPLWHVAAESRPRIQASHNHC*SGACLG
Trigger: TCCTAAACAGGCACCTGAGCAACAATGATTATGAGA...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTTGTAAATCCAACGTGGCCTCTTCATCAGATGACAGGGCTGTGTCACCACACATGATGCGCGTGCCATaGCCATCTCCACACGGACCA +
Preference number: 4 (lower is better)
Translates to: SCKSNVASSSDDRAVSPHMMRVP*PSPHGP
Trigger: TGGTCCGTGTGGAGATGGCCATGGCACGCGCATCAT...GTGTGGTGACACAGCCCTGTCATCTGATGAAGAGGCCACGTTGGATTTACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCATCTCGGAAAAGCTTCTaGGCAATGTGCAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPSRKSF*AMCRGF
Trigger: AAACCCTCTGCACATTGCCCAGAAGCTTTTCCGAGA...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTCCAACTCAGCCCAGTTaGGGGCCGCAGAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLPTQPS*GPQRTS
Trigger: GCTGGTTCTCTGCGGCCCCCAACTGGGCTGAGTTGG...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTAGAAGGCCTGATCTTTaGTCTCTAGCCATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSRRPDL*SLAIAG
Trigger: TCCAGCTATGGCTAGAGACCAAAGATCAGGCCTTCT...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAAGTCTGGCTGGAAGCTaGGGAAAGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLISLAGS*GKHCSQ
Trigger: CTGGGAACAATGCTTTCCCCAGCTTCCAGCCAGACT...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TCTGGACGTCCATGTGAACAGGCTTGCCAAGAAGGACAAAGTGGGCAGGTAAAGTCTGGGGCACTACTTTaGTCTGTGTGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGRPCEQACQEGQSGQVKSGALL*SVWQWL
Trigger: CAGCCACTGCCACACAGACCAAAGTAGTGCCCCAGA...CTTTACCTGCCCACTTTGTCCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGTGCTTTTTCCCTTCTaGTCAGCCACACTCACGCCA +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIVLFPF*SATLTP
Trigger: TGGCGTGAGTGTGGCTGACCAGAAGGGAAAAAGCAC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACCACAGCTACAGTCTTaGACACAGCAGCATTCATAC +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPPQLQS*TQQHSY
Trigger: GTATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCAAAATACAATCCTCATaGAGAACCAGCCTATTCGCT +
Preference number: 4 (lower is better)
Translates to: PLWHVAAESRPRIQATVAKIQSS*RTSLFA
Trigger: AGCGAATAGGCTGGTTCTCCATGAGGATTGTATTTT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCATGGAGGTGTTCACGTTaGGAATCACTTAACACTTCC +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPWRCSR*ESLNTS
Trigger: GGAAGTGTTAAGTGATTCTCAACGTGAACACCTCCA...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCTGCTTACAGAAGGCCTaGTCTTTGGTCTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLCLQKA*SLVSSH
Trigger: ATGGCTAGAGACCAAAGATCAGGCCTTCTGTAAGCA...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATGCTTACAGAAGGCCTaGTCTTTGGTCTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSCLQKA*SLVSSH
Trigger: ATGGCTAGAGACCAAAGATCAGGCCTTCTGTAAGCA...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACTGGGGGTTACAGGTGTaGCTGGGGTGGGTGGCATAC +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNWGLQV*LGWVAY
Trigger: GTATGCCACCCACCCCAGTCACACCTGTAACCCCCA...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GCAGTTTTCATATCCGTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAAAGATGAGTTCATTCTaGTGCTCAGCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVFISVVESVGTTRRGTAKMSSF*CSALSS
Trigger: TGAAGACAGTGCTGAGCAGCAGAATGAACTCATCTT...TGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR GCA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACTTCCGCTTCTCGTGGTaGTTCTTTAACATTATCTTC +
Preference number: 4 (lower is better)
Translates to: MARGSRIQATNPGHRCHHFRFSW*FFNIIF
Trigger: GAAGATAATGTTAAAGAAGCACCACGAGAAGCGGAA...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATTTTCTGGCTTTAGCTaGAGCTGCTTGTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEFSGFS*SCLCLV
Trigger: CACCAAGCACAAGCAGCTGCAGCTAAAGCCAGAAAA...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTGGCTTCACACCAAGCTaGCCAGTGATTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: NTILMENQPIRCVHSATGGFTPS*PVIATC
Trigger: GCAGGTGGCAATCACTGGGCAGCTTGGTGTGAAGCC...ACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGCCTCTCGATTACTATaGAGTTACCAAGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHASRLL*SYQAGY
Trigger: GTAGCCAGCTTGGTAACTGCATAGTAATCGAGAGGC...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp GGCCAGCCCCAAGGGCCTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTAGGTATACTCTGAACTaGAACAAAGTTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQPQGPGLQLLLWSRAEGRYTLN*NKVSAA
Trigger: TGCAGCAGAAACTTTGTTGCAGTTCAGAGTATACCT...ACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp TCTGGACGTCCATGTGAACAGGCTTGCCAAGAAGGACAAAGTGGGCAGGTAAAGCTGTCTTCAGGAAACTaGGGCAGAAACTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGRPCEQACQEGQSGQVKLSSGN*GRNCWR
Trigger: CCTCCAGCAGTTTCTGCCCCAGTTTCCTGAAGACAG...CTTTACCTGCCCACTTTGTCCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATACTGGACTTCACCTTaGATGGGGGCTTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEYWTSP*MGAWVF
Trigger: AAAAACCCAAGCCCCCATCCAAGGTGAAGTCCAGTA...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAAATGGCGGGCAATGCTaGTGTGGTGGGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQNGGQC*CGGGYR
Trigger: CCTGTAACCCCCACCACACCAGCATTGCCCGCCATT...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCGGCCCTCCCGACTGCTaGGGAACAGCAGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFGPPDC*GTAGRL
Trigger: TAGCCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCC...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACTCCTGCTGGCATCTGTaGCAATGTCTGTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNSCWHL*QCLCRP
Trigger: GGGCCGGCACAGACATTGCCACAGATGCCAGCAGGA...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGAGCTTAGTGCCTGCTaGCATAGTTGTGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHELSAC*HSCEDD
Trigger: ATCATCCTCACAACTATGCCAGCAGGCACTAAGCTC...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAGTCAATTTCCTTATTTaGGGAAGGGAAGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSVNFLI*GREAGP
Trigger: TGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGAC...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGCTTGTACTGTGACTTaGAGCATAACTGCCGGTACT +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIACTVT*SITAGT
Trigger: AGTACCGGCAGTTATGCTTCAAGTCACAGTACAAGC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACGCTCCCGAGCCTTGTTaGGCGAGGTCTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNAPEPC*ARSPCQ
Trigger: TTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGC...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAAGACTTAGCTGGTTCTaGGACTGTGGAAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQRLSWF*DCGRAA
Trigger: AGCGGCCCTTCCACAGTCTCAGAACCAGCTAAGTCT...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTCCATCATGTCCGGAGTaGTTCGCAGAACCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLPSCPE*FAEPSG
Trigger: GCCAGACGGTTCTGCGAATCACTCCGGACATGATGG...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCCGTGGGTTGCAACGGTaGTGGTCTGGCCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFRGLQR*WSGLLW
Trigger: CCAAAGCAGGCCAGACCATCACCGTTGCAACCCACG...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAAGAGCTCGGAAGCCATaGGCTGAGATCTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIRARKP*AEIFKR
Trigger: TCTTTTGAAGATCTCAGCTCATGGCTTCCGAGCTCT...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS-3UTR GCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTAAGATGAGTTCATTCTaGTGCTCAGCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSKMSSF*CSALSS
Trigger: TGAAGACAGTGCTGAGCAGCAGAATGAACTCATCTT...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACTGGCTGGCGATGACTaGCAATCCAAAACTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQLAGDD*QSKTRS
Trigger: GGAGCGAGTTTTGGATTGGCAGTCATCGCCAGCCAG...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTGGTGATGGTCTGGCCTaGTTTGGGAGGCATCACTCC +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLGDGLA*FGRHHS
Trigger: GGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACC...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTTTGCTTGGCGTGGGTTaGAACGGTGATGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLLLGVG*NGDGLA
Trigger: GGCCAGACCATCACCGTTGCAACCCACGCCAAGCAA...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTCTGCAACAAAGTTTCTaGTGCAAAAGCAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARLQQSF*CKSSTS
Trigger: AGAGGTGCTGCTTTTGCAGCAGAAACTTTGTTGCAG...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAGATCTGCGGTCCTGCTaGCATCTGTGGCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQDLRSC*HLWQCL
Trigger: CAGACATTGCCACAGATGCCAGCAGGACCGCAGATC...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp ATCCCAACACCCCTATCTTTAAGAGGCAGTGCCAAGCGAATCCCATTTCAGGGGGTGGCCATTACTGTCTaGGGCACTACTTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IPTPLSLRGSAKRIPFQGVAITV*GTTLVC
Trigger: ACAGACCAAAGTAGTGCCCCAGACAGTAATGGCCAC...CCCCTGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGATAGGGGTGTTGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp AATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTTGGCTGAACTGGCCTTaGCAGGGCTATCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: NTILMENQPIRCVHSATGWLNWP*QGYQLH
Trigger: ATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCA...ACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp AATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTTGGTACCTGTTGGAGTaGATGAAGGGGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NTILMENQPIRCVHSATGWYLLE*MKGHWL
Trigger: CAGCCAGTGCCCCTTCATCCACTCCAACAGGTACCA...ACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSAGFSL*IQQMER
Trigger: TCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ATCCCAACACCCCTATCTTTAAGAGGCAGTGCCAAGCGAATCCCATTTCAGGGGTTACCTGAGTGCTGGTaGCATCTGGTGCAAGAAACT +
Preference number: 4 (lower is better)
Translates to: IPTPLSLRGSAKRIPFQGLPECW*HLVQET
Trigger: AGTTTCTTGCACCAGATGTCACCAGCACTCAGGTAA...CCCCTGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGATAGGGGTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACGCATACTGGAGTCACTaGGGCTCATCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNAYWSH*GSSGSA
Trigger: AGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGC...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTTTCTGCCTTCGAATCTaGAAGCAGCCACAGATAATA +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARFCLRI*KQPQII
Trigger: TATTATCTGTGGCTGCTTTCAGATTCGAAGGCAGAA...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAATGAGTTCATTCTGCTaGTCAGCACTGTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIMSSFC*SALSSG
Trigger: TCCTGAAGACAGTGCTGAGCAGCAGAATGAACTCAT...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACAGGCTCATCTGGCTCTaGTCAGAAGGGCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNRLIWL*SEGPLL
Trigger: TAGCAGTGGCCCTTCTGAGCAGAGCCAGATGAGCCT...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTT +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPGSVSI*SKESIV
Trigger: AACAATGGATTCCTTAGACCATATGCTGACAGATCC...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTTGTTTCCGCTTCTCGTaGTGCTTCTTTAACATTATC +
Preference number: 4 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSCFRFS*CFFNII
Trigger: GATAATGTTAAAGAAGCACCACGAGAAGCGGAAACA...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACCAAATGGAGAGAAACTaGAAGGAACAGCTCGACTTT +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHQMERN*KEQLDF
Trigger: AAAGTCGAGCTGTTCCTTCCAGTTTCTCTCCATTTG...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTTCACTGAGGCTCATCTaGCTCTGCTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLSLRLI*LCSEGP
Trigger: TGGCCCTTCTGAGCAGAGCCAGATGAGCCTCAGTGA...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCGCTTACTCACAGGGCTaGCTGTGGCAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFAYSQG*LWQGDL
Trigger: CAAGTCTCCCTGCCACAGCCAGCCCTGTGAGTAAGC...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTATTCGCAGAACCGTCTaGCCCTTGGCATCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLIRRTV*PLASVV
Trigger: CACCACAGATGCCAAGGGCCAGACGGTTCTGCGAAT...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCGCAACGGTGATGGTCTaGCCTGCTTTGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFATVMV*PALGGI
Trigger: GATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGC...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAGACCTTGGAACCCTaGAGTGAACCTTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQQTLEP*SEPFSG
Trigger: CCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCCCAAGTTTGTATTTaGGAAAGATGTACAACAGGT +
Preference number: 4 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVAQVCI*ERCTTG
Trigger: ACCTGTTGTACATCTTTCTCAAATACAAACTTGGGC...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACTTACACCTTATCCTTaGACCCTAATTACAGCTAAA +
Preference number: 4 (lower is better)
Translates to: FSGCSTMARGSRIQATNPLTPYP*TLITAK
Trigger: TTTAGCTGTAATTAGGGTGCAAGGATAAGGTGTAAG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS-3UTR CCA 90 bp AGCAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACTCCTTTTCATTATCTTaGGATTGGCCAAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SRPWNPGVNLSQGAPLWHSFSLS*DWPSNF
Trigger: GAAGTTGCTTGGCCAATCCCAAGATAATGAAAAGGA...GTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTTCCTTTTCATTATCTTaGGATTGGCCAAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARSFSLS*DWPSNF
Trigger: GAAGTTGCTTGGCCAATCCCAAGATAATGAAAAGGA...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACAAACACGCCCTTCACTaGCCCCACCACAGACTCAAA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNKHALH*PHHRLK
Trigger: TTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTT...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACATGCTGTTGCCTGTTTaGGGCTTCACACCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNMLLPV*GFTPSC
Trigger: GCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCAT...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAGTCCCGAAGAGGTCCTaGGTCAATTTGACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQVPKRS*VNLTVV
Trigger: TACCACAGTCAAATTGACCCAGGACCTCTTCGGGAC...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACTTGCCCTTCATTGGCTaGCTGATCACAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNLPFIG*LITERG
Trigger: TCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAA...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTCAGACCTTGGAACCCTaGAGTGAACCTTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLQTLEP*SEPFSG
Trigger: CCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
3UTR CAA 72 bp AGCCTTCCCTGGGGGTCTTACTCTCAGAACTCTGGCTaGTTGGACGTAACTGGTAATTCCTGCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SLPWGSYSQNSG*LDVTGNSCNFN
Trigger: GTTGAAATTGCAGGAATTACCAGTTACGTCCAACAAGCCAGAGTTCTGAGAGTAAGACCCCCAGGGAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446488.7
3UTR CAA 72 bp TTTACAAAAACAAATGGCCAGCCCCAAGGGCCTGGTTaGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: FTKTNGQPQGPG*QLLLWSRAEGI
Trigger: TATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGGCTGGCCATTTGTTTTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAATGTGGCATTGTTGGTaGAGACACCAGAAGAACACC +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQMWHCW*RHQKNT
Trigger: GGTGTTCTTCTGGTGTCTTCACCAACAATGCCACAT...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCACAGTTCTACTTTATCTaGAGTTTTCATATCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSQFYFI*SFHIRG
Trigger: ACCACGGATATGAAAACTGCAGATAAAGTAGAACTG...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCCCAGAGAGCCCTTCCTaGCAGCATTTACTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSAPESPS*QHLLES
Trigger: TGACTCGAGTAAATGCTGGCAGGAAGGGCTCTCTGG...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACAGCTGCAGCTGCTTGTaGTTGGTGAATCCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNSCSCL*LVNPLK
Trigger: TTTGAGCGGATTCACCAAGCACAAGCAGCTGCAGCT...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTAGCCTATTCGCTGTGTaGACTCTGCAACTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLSLFAV*TLQLVS
Trigger: GCTTACCAGTTGCAGAGTGCACACAGCGAATAGGCT...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTT +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIGSVSI*SKESIV
Trigger: AACAATGGATTCCTTAGACCATATGCTGACAGATCC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCAGTCTGGCTGGAAGCTaGGGAAAGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSASLAGS*GKHCSQ
Trigger: CTGGGAACAATGCTTTCCCCAGCTTCCAGCCAGACT...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAGTTAGTGGCTGTGAGTaGAATGCTGTTGCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQVSGCE*NAVACL
Trigger: CAAACAGGCAACAGCATTCCACTCACAGCCACTAAC...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCAGCAGCATTCATACTaGGTAAGGACACCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNQQHSY*VRTPLK
Trigger: CTTCAGCGGTGTCCTTACCCAGTATGAATGCTGCTG...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACCACAGCTACAGTCTTaGACACAGCAGCATTCATAC +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQPQLQS*TQQHSY
Trigger: GTATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGG...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATACCTCTGCCTCTGATTTaGTCGTTTTTATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIPLPLI*SFLFSS
Trigger: AGAAGAAAATAAAAACGATCAAATCAGAGGCAGAGG...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp AAATTTTCTGGACACAAAACTCCTATCCAGACCACTAGTCATGGAGAAGACCAGATAGGAAGGCTAGCCTaGCTCTCCAGCAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: KFSGHKTPIQTTSHGEDQIGRLA*LSSSKI
Trigger: GATCTTGCTGCTGGAGAGTCAGGCTAGCCTTCCTAT...CTGGTCTTCTCCATGACTAGTGGTCTGGATAGGAGTTTTGTGTCCAGAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACTTACCTGAGTGCTGGTaGCATCTGGTGCAAGAAACT +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNLPECW*HLVQET
Trigger: AGTTTCTTGCACCAGATGTCACCAGCACTCAGGTAA...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACAGCTGGTTTTGCTTCTaGAGAGGCCACTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNSWFCF*RGHCAF
Trigger: AAAAGCACAGTGGCCTCTTCAGAAGCAAAACCAGCT...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTAGCTGGTTTTGCTTCTaGAGAGGCCACTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLSWFCF*RGHCAF
Trigger: AAAAGCACAGTGGCCTCTTCAGAAGCAAAACCAGCT...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAATCACTTAACACTTCCTaGCATGTTGAGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQSLNTS*HVERLT
Trigger: TGTCAGCCTCTCAACATGGCAGGAAGTGTTAAGTGA...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCGTCTCTAGCCATAGCTaGAAGAGGGCAGCTAATTCC +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFVSSHS*KRAANS
Trigger: GGAATTAGCTGCCCTCTTCCAGCTATGGCTAGAGAC...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTGAGCTTAGTGCCTGCTaGCATAGTTGTGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLELSAC*HSCEDD
Trigger: ATCATCCTCACAACTATGCCAGCAGGCACTAAGCTC...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATGGAGGCAATCCTCCATaGTGCGCGTGCCATGGCCAT +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYGGNPP*CACHGH
Trigger: ATGGCCATGGCACGCGCATCATGGAGGATTGCCTCC...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR TCA 90 bp ATCCCAACACCCCTATCTTTAAGAGGCAGTGCCAAGCGAATCCCATTTCAGGGGCCTCTGCCTCTGATTTaGTCGTTTTTATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IPTPLSLRGSAKRIPFQGPLPLI*SFLFSS
Trigger: AGAAGAAAATAAAAACGATCAAATCAGAGGCAGAGG...CCCCTGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGATAGGGGTGTTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTACTACTGTATTTACCTaGGTGCTGGTGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLTTVFT*VLVTSG
Trigger: ACCAGATGTCACCAGCACTCAGGTAAATACAGTAGT...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR TCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACGGCTTGGGTTTTTGCTaGAGAGCTTTTCTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNGLGFC*RAFLAL
Trigger: TAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAGCC...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCTTATGGAGCTCTCCTTaGTACTGGACTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSALWSSP*YWTSPW
Trigger: CCAAGGTGAAGTCCAGTAGCAAGGAGAGCTCCATAA...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAAATCTTTAAGAGGCAGTaGCAAGCGAATCCCATTTCA +
Preference number: 4 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQIFKRQ*QANPIS
Trigger: TGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGAT...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTCTGGACAAAGACATaGATCTTGAGACAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNLWTKT*ILRQKG
Trigger: GCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAG...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTCAGTTTTCATATCCGTaGTTGAAAGTGTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLQFSYP*LKVWAP
Trigger: TGGTGCCCACACTTTCAACCACGGATATGAAAACTG...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACTCATTATCTTGGGATTaGCCAAGCAACTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNSLSWD*PSNFHC
Trigger: GCAGTGGAAGTTGCTTGGCCAATCCCAAGATAATGA...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCATTTACAAAAACAAATaGCCAGCCCCAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSAIYKNK*PAPRAW
Trigger: CCAGGCCCTTGGGGCTGGCCATTTGTTTTTGTAAAT...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTGCAGAAGGTATACTCTaGACTGCAACAAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLAEGIL*TATKFL
Trigger: CAGAAACTTTGTTGCAGTTCAGAGTATACCTTCTGC...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTCCAAGCAACTTCCACTaGTGGGTTTTCTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLPSNFH*WVFSLN
Trigger: ATTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGG...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATATGATGCGCGTGCCATaGCCATCTCCACACGGACCA +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYMMRVP*PSPHGP
Trigger: TGGTCCGTGTGGAGATGGCCATGGCACGCGCATCAT...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR CCA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCTTACTCTCAGAACTCTaGCTTGTTGGACGTAACTGG +
Preference number: 4 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSALLSEL*LVGRNW
Trigger: CCAGTTACGTCCAACAAGCCAGAGTTCTGAGAGTAA...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp AAATTTTCTGGACACAAAACTCCTATCCAGACCACTAGTCATGGAGAAGACCAGGCCATGTTGAGAGGCTaGCAACATCAAAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: KFSGHKTPIQTTSHGEDQAMLRG*QHQRRS
Trigger: AGATCTTCTTTGATGTTGTCAGCCTCTCAACATGGC...CTGGTCTTCTCCATGACTAGTGGTCTGGATAGGAGTTTTGTGTCCAGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR TCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLAGFSL*IQQMER
Trigger: TCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGC...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR GCA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCAAGATGAGTTCATTCTaGTGCTCAGCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFKMSSF*CSALSS
Trigger: TGAAGACAGTGCTGAGCAGCAGAATGAACTCATCTT...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR GCA 90 bp AAATTTTCTGGACACAAAACTCCTATCCAGACCACTAGTCATGGAGAAGACCAGAATGAGCTTAGTGCCTaGTGGCATAGTTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: KFSGHKTPIQTTSHGEDQNELSA*WHSCED
Trigger: ATCCTCACAACTATGCCAGCAGGCACTAAGCTCATT...CTGGTCTTCTCCATGACTAGTGGTCTGGATAGGAGTTTTGTGTCCAGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CCA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTTGTTTCCGCTTCTCGTaGTGCTTCTTTAACATTATC +
Preference number: 4 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLCFRFS*CFFNII
Trigger: GATAATGTTAAAGAAGCACCACGAGAAGCGGAAACA...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATCTGTCTTCAGGAAACTaGGGCAGAAACTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYLSSGN*GRNCWR
Trigger: CCTCCAGCAGTTTCTGCCCCAGTTTCCTGAAGACAG...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR TCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATCACTTCCTGCCATGTTaGGAGGCTGACAACATCAAA +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYHFLPC*EADNIK
Trigger: TTTGATGTTGTCAGCCTCTCAACATGGCAGGAAGTG...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR TCA 90 bp TGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATGTATGGAGGTGTTCACGTTaGGAATCACTTAACACTTCC +
Preference number: 4 (lower is better)
Translates to: CRCWLQADAGYKLNSYYVWRCSR*ESLNTS
Trigger: GGAAGTGTTAAGTGATTCTCAACGTGAACACCTCCA...TACATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR GCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATCACAAAACCGCTCTTTaGTGCCTCAGTATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYHKTAL*CLSISE
Trigger: TTCCGAGATACTGAGGCAGCAAAGAGCGGTTTTGTG...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR CCA 90 bp TGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATGTATTTTCTTCTCGGAAAAGCTTCTaGGCAATGTGCAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: CWLQADAGYKLNSYYVFSSRKSF*AMCRGF
Trigger: AAACCCTCTGCACATTGCCCAGAAGCTTTTCCGAGA...AGAAAATACATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR TCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATGCCATGTTGAGAGGCTaGCAACATCAAAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYAMLRG*QHQRRS
Trigger: AGATCTTCTTTGATGTTGTCAGCCTCTCAACATGGC...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR TCA 90 bp TTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATATGCTGGTTACAAGCTaGTGCTGGTTACAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LCRCWLQADAGYKLNSYYMLVTS*CWLQAE
Trigger: TTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCAT...ATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR GCA 90 bp TTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATTCACTTAACACTTCCTaGCATGTTGAGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LCRCWLQADAGYKLNSYYSLNTS*HVERLT
Trigger: TGTCAGCCTCTCAACATGGCAGGAAGTGTTAAGTGA...ATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR GCA 90 bp TGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATGTAAAGATGAGTTCATTCTaGTGCTCAGCACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CRCWLQADAGYKLNSYYVKMSSF*CSALSS
Trigger: TGAAGACAGTGCTGAGCAGCAGAATGAACTCATCTT...TACATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR CCA 90 bp TTTTTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTT +
Preference number: 4 (lower is better)
Translates to: FLCRCWLQADAGYKLNSYGSVSI*SKESIV
Trigger: AACAATGGATTCCTTAGACCATATGCTGACAGATCC...ATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR CCA 90 bp TGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATGTATTTTCTTTTTTATGTAGATGCTaGTTACAAGCTGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: CWLQADAGYKLNSYYVFSFLCRC*LQADAG
Trigger: ACCAGCATCAGCTTGTAACCAGCATCTACATAAAAA...AGAAAATACATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS TCA 90 bp CTGGCTTACTCACAGGGCTGGCTGTGGCAGGGAGACTTGTCACCGTaGGCCCTGTCTGCCCGGGTCCAGGCCGCTGCACAGTGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LAYSQGWLWQGDLSP*ALSARVQAAAQWLP
Trigger: CGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCAGACAGGGCTCACGGTGACAAGTCTCCCTGCCACAGCCAGCCCTGTGAGTAAGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS GCA 90 bp GGGAGACTTGTCACCGTGAGCCCTGTCTGCCCGGGTCCAGGCCGCTaGACAGTGGCTGCCGTAGTCTGCGCTTTGACGGGCACAGTGGCC +
Preference number: 5 (lower is better)
Translates to: GRLVTVSPVCPGPGR*TVAAVVCALTGTVA
Trigger: GGCCACTGTGCCCGTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCAGACAGGGCTCACGGTGACAAGTCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS GCA 90 bp ACAGGGCTGGCTGTGGCAGGGAGACTTGTCACCGTGAGCCCTGTCTaGCCGGGTCCAGGCCGCTGCACAGTGGCTGCCGTAGTCTGCGCT +
Preference number: 5 (lower is better)
Translates to: TGLAVAGRLVTVSPV*PGPGRCTVAAVVCA
Trigger: AGCGCAGACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCAGACAGGGCTCACGGTGACAAGTCTCCCTGCCACAGCCAGCCCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS GCA 90 bp GGTCCTGCTGGCATCTGTGGCAATGTCTGTGCCGGCCCTCCCGACTaGTGGGGAACAGCAGGAAGGCTAGGCTGGGCCACCACTCGCACC +
Preference number: 5 (lower is better)
Translates to: GPAGICGNVCAGPPD*WGTAGRLGWATTRT
Trigger: GGTGCGAGTGGTGGCCCAGCCTAGCCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 90 bp AGGCAGGCCGGTCGGAGCGCAGCAGGGAGTGCTCCCGAGCCTTGTTaGGCGAGGTCTCCTTGTCAAACACGCCCTTCACTGGCCCCACCA +
Preference number: 5 (lower is better)
Translates to: RQAGRSAAGSAPEPC*ARSPCQTRPSLAPP
Trigger: TGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTCCGACCGGCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 90 bp AGCTGGACCAGGTCCTCCCTCCCGTTATTTCCAATTCTGGAATCCTaGACCGCGGGCGCCGGCCCCCTAACCCGCAGCCCTTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: SWTRSSLPLFPILES*TAGAGPLTRSPSPA
Trigger: GGCCGGAGAAGGGCTGCGGGTTAGGGGGCCGGCGCCCGCGGTTCAGGATTCCAGAATTGGAAATAACGGGAGGGAGGACCTGGTCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526884.1
ENST00000529319.5
ENST00000532225.5
ENST00000682444.1
CDS GCA 90 bp TTCCCAGCCTGGGACGTGGACACAACCGTGGTGCTGACAGGGACCTaGCGCACGGTGGGGGCTCCTGTGCTGATGCTGATGGGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: FPAWDVDTTVVLTGT*RTVGAPVLMLMGVL
Trigger: AAGCACCCCCATCAGCATCAGCACAGGAGCCCCCACCGTGCGGCAGGTCCCTGTCAGCACCACGGTTGTGTCCACGTCCCAGGCTGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp TGTGGCAGTGGCTGGAACCCGGATCTGCGGTCCTGCTGGCATCTGTaGCAATGTCTGTGCCGGCCCTCCCGACTGCTGGGGAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: CGSGWNPDLRSCWHL*QCLCRPSRLLGNSR
Trigger: CCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp GCCACCGAGGCCCCTTGCTTGGCGTGGGTTGCAACGGTGATGGTCTaGCCTGCTTTGGGAGGCATCACTCCCAGTCCCTGCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: ATEAPCLAWVATVMV*PALGGITPSPCTMR
Trigger: CCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 90 bp ACCCACTGGCCACCGAGGCCCCTTGCTTGGCGTGGGTTGCAACGGTaGTGGTCTGGCCTGCTTTGGGAGGCATCACTCCCAGTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: THWPPRPLAWRGLQR*WSGLLWEASLPVPA
Trigger: TGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 90 bp TGGAACCCGGATCTGCGGTCCTGCTGGCATCTGTGGCAATGTCTGTaGCGGCCCTCCCGACTGCTGGGGAACAGCAGGAAGGCTAGGCTG +
Preference number: 5 (lower is better)
Translates to: WNPDLRSCWHLWQCL*RPSRLLGNSRKARL
Trigger: CAGCCTAGCCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 90 bp CCTGTCTGCCCGGGTCCAGGCCGCTGCACAGTGGCTGCCGTAGTCTaGGCTTTGACGGGCACAGTGGCCATTACTGTCTGGGGCACTACT +
Preference number: 5 (lower is better)
Translates to: PVCPGPGRCTVAAVV*ALTGTVAITVWGTT
Trigger: AGTAGTGCCCCAGACAGTAATGGCCACTGTGCCCGTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCAGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CCA 90 bp TTTGGTCTGTGTGGCAGTGGCTGGAACCCGGATCTGCGGTCCTGCTaGCATCTGTGGCAATGTCTGTGCCGGCCCTCCCGACTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FGLCGSGWNPDLRSC*HLWQCLCRPSRLLG
Trigger: CCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp CGGCAGCCGTGGAGGCACTGGGAGCAGAGGTCCCAGGAGAACTCGTaGCTGGCTTACTCACAGGGCTGGCTGTGGCAGGGAGACTTGTCA +
Preference number: 5 (lower is better)
Translates to: RQPWRHWEQRSQENS*LAYSQGWLWQGDLS
Trigger: TGACAAGTCTCCCTGCCACAGCCAGCCCTGTGAGTAAGCCAGCCACGAGTTCTCCTGGGACCTCTGCTCCCAGTGCCTCCACGGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS GCA 90 bp TGGGGCACTACTTTGGTCTGTGTGGCAGTGGCTGGAACCCGGATCTaGGGTCCTGCTGGCATCTGTGGCAATGTCTGTGCCGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: WGTTLVCVAVAGTRI*GPAGICGNVCAGPP
Trigger: GGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGTAGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 90 bp CGAGGCCCCTTGCTTGGCGTGGGTTGCAACGGTGATGGTCTGGCCTaGTTTGGGAGGCATCACTCCCAGTCCCTGCACGATGCGGATCGT +
Preference number: 5 (lower is better)
Translates to: RGPLLGVGCNGDGLA*FGRHHSQSLHDADR
Trigger: ACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 90 bp AGTTCCAGACCCACTGGCCACCGAGGCCCCTTGCTTGGCGTGGGTTaGAACGGTGATGGTCTGGCCTGCTTTGGGAGGCATCACTCCCAG +
Preference number: 5 (lower is better)
Translates to: SSRPTGHRGPLLGVG*NGDGLACFGRHHSQ
Trigger: CTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp AGCCGTGGAGGCACTGGGAGCAGAGGTCCCAGGAGAACTCGTGGCTaGCTTACTCACAGGGCTGGCTGTGGCAGGGAGACTTGTCACCGT +
Preference number: 5 (lower is better)
Translates to: SRGGTGSRGPRRTRG*LTHRAGCGRETCHR
Trigger: ACGGTGACAAGTCTCCCTGCCACAGCCAGCCCTGTGAGTAAGCCAGCCACGAGTTCTCCTGGGACCTCTGCTCCCAGTGCCTCCACGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS-3UTR CAA 90 bp GGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGCGCTTGTACTGTGACTaGAAGCATAACTGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: GREGRGHSAGPSPADHSGRLYCD*KHNCRY
Trigger: GTACCGGCAGTTATGCTTCAAGTCACAGTACAAGCG...CCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CAA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCCGTAGTCTGCGCTTaGACGGGCACAGTGGCCATT +
Preference number: 5 (lower is better)
Translates to: AAESRPRIQATVAITPRLAVVCA*TGTVAI
Trigger: AATGGCCACTGTGCCCGTCAAAGCGCAGACTACGGC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTCTGGCTGAACTGGCCTaGGCAGGGCTATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: AESRPRIQATVAITPRLALAELA*AGLSAA
Trigger: TGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAG...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGGCCACCGAGGCCCCTaGCTTGGCGTGGGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQGHRGP*LGVGCN
Trigger: GTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS GCA 90 bp TACTTTGGTCTGTGTGGCAGTGGCTGGAACCCGGATCTGCGGTCCTaGTGGCATCTGTGGCAATGTCTGTGCCGGCCCTCCCGACTGCTG +
Preference number: 5 (lower is better)
Translates to: YFGLCGSGWNPDLRS*WHLWQCLCRPSRLL
Trigger: CAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp CAGCAGAGCCAGAGTGGCTCACGACCCGGGCGGCAGCCTGAGAACTaGGTGCAGTCTGGCTGGAAGCTGGGGAAAGCATTGTTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QQSQSGSRPGRQPEN*VQSGWKLGKALFPD
Trigger: ATCTGGGAACAATGCTTTCCCCAGCTTCCAGCCAGACTGCACCCAGTTCTCAGGCTGCCGCCCGGGTCGTGAGCCACTCTGGCTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp TGGACAGTTCCAGACCCACTGGCCACCGAGGCCCCTTGCTTGGCGTaGGTTGCAACGGTGATGGTCTGGCCTGCTTTGGGAGGCATCACT +
Preference number: 5 (lower is better)
Translates to: WTVPDPLATEAPCLA*VATVMVWPALGGIT
Trigger: AGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS-3UTR CAA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGATGGTCTGGCCTGCTTaGGGAGGCATCACTCCCAGT +
Preference number: 5 (lower is better)
Translates to: AAESRPRIQATVAITPRLMVWPA*GGITPS
Trigger: ACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCAT...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGCTCCAAGGTTGCCTTaGATGATGGGGGCTGTGACC +
Preference number: 5 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWAPRLP*MMGAVT
Trigger: GGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGC...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGTTGTGAGGATGATGTaGCGGCCCAACCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWVVRMM*RPNPLR
Trigger: CCTCAGTGGGTTGGGCCGCAACATCATCCTCACAAC...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCCCCAAGGGCCTGGTTaGCAACTCTTGCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PLWHVAAESRPRIQATVAPQGPG*QLLLWS
Trigger: GCTCCAGAGCAAGAGTTGCAAACCAGGCCCTTGGGG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS GCA 90 bp GCTGAAGTATGGACAGTTCCAGACCCACTGGCCACCGAGGCCCCTTaGTTGGCGTGGGTTGCAACGGTGATGGTCTGGCCTGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: AEVWTVPDPLATEAP*LAWVATVMVWPALG
Trigger: TCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCATACTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp GGCTCACGACCCGGGCGGCAGCCTGAGAACTGGGTGCAGTCTGGCTaGAAGCTGGGGAAAGCATTGTTCCCAGATGTGGCATTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GSRPGRQPENWVQSG*KLGKALFPDVALLV
Trigger: CACCAACAATGCCACATCTGGGAACAATGCTTTCCCCAGCTTCCAGCCAGACTGCACCCAGTTCTCAGGCTGCCGCCCGGGTCGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp CGGGCACAGTGGCCATTACTGTCTGGGGCACTACTTTGGTCTGTGTaGCAGTGGCTGGAACCCGGATCTGCGGTCCTGCTGGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: RAQWPLLSGALLWSV*QWLEPGSAVLLASV
Trigger: CACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGTAGTGCCCCAGACAGTAATGGCCACTGTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS-3UTR CAA 90 bp GGAAGGGAAGGGCGGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: GREGRGHSAGPSPADHSGGLRNP*FLLHRY
Trigger: GTACCTGTGGAGAAGAAACAATGGATTCCTTAGACC...CCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCCGCCCTTCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CAA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCAGAGTGCTCCCGAGCCTaGTTGAGCGAGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPECSRA*LSEVSL
Trigger: CAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTC...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCGAGTGCTCCCGAGCCTaGTTGAGCGAGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SGCSTMARGSRIQATNPGECSRA*LSEVSL
Trigger: CAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTC...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGTGGTAACCTGGGACTaGGCCAATGTGGCCATCATG +
Preference number: 5 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPVVTWD*ANVAIM
Trigger: CATGATGGCCACATTGGCCAAGTCCCAGGTTACCAC...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGTGGTAACCTGGGACTaGGCCAATGTGGCCATCATG +
Preference number: 5 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWVVTWD*ANVAIM
Trigger: CATGATGGCCACATTGGCCAAGTCCCAGGTTACCAC...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCCTTTGCCTGTAGTGTaGCCTCCTGTCCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAPLPVV*PPVPKR
Trigger: CCTCTTCGGGACAGGAGGCAACACTACAGGCAAAGG...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTAGAAGCTGTTCCCTGTaGGAGATGGGATGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: AESRPRIQATVAITPRLARSCSL*EMGCRD
Trigger: GTCCCTGCATCCCATCTCCAACAGGGAACAGCTTCT...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTAGAAGCTGTTCCCTGTaGGAGATGGGATGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GSRIQATNPGHRCHHPSPRSCSL*EMGCRD
Trigger: GTCCCTGCATCCCATCTCCAACAGGGAACAGCTTCT...AGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGAATCCAGGCCACCGTaGCCATCACCCCTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSESRPP*PSPLAW
Trigger: CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCGAATCCAGGCCACCGTaGCCATCACCCCTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIESRPP*PSPLAW
Trigger: CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTC...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGGTAGAGAGCAGACCTaGGAACCCTGGAGTGAACCT +
Preference number: 5 (lower is better)
Translates to: AAESRPRIQATVAITPRLGREQT*EPWSEP
Trigger: AGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS GCA 90 bp TGGTCTGGCCTGCTTTGGGAGGCATCACTCCCAGTCCCTGCACGATaGGGATCGTGGCAGCTGGTTTTGCTTCTGAAGAGGCCACTGTGC +
Preference number: 5 (lower is better)
Translates to: WSGLLWEASLPVPAR*GSWQLVLLLKRPLC
Trigger: GCACAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 90 bp ACGGTGATGGTCTGGCCTGCTTTGGGAGGCATCACTCCCAGTCCCTaGACGATGCGGATCGTGGCAGCTGGTTTTGCTTCTGAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: TVMVWPALGGITPSP*TMRIVAAGFASEEA
Trigger: GGCCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp GGGCAATGCTGGTGTGGTGGGGGTTACAGGTGTGACTGGGGTGGGTaGCATACTGGAGTCACTGAGGCTCATCTGGCTCTGCTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GQCWCGGGYRCDWGG*HTGVTEAHLALLRR
Trigger: CCTTCTGAGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGCCACCCACCCCAGTCACACCTGTAACCCCCACCACACCAGCATTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS-3UTR CAA 90 bp CAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGTCAAGGGGCTCTTCCTaGATAGCAGGAATTGCCAGC +
Preference number: 5 (lower is better)
Translates to: QQNPGHESRPPLPSPLAWSRGSS*IAGIAS
Trigger: GCTGGCAATTCCTGCTATCAAGGAAGAGCCCCTTGA...CCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCCGAGGGACAGGTGTaGTGGCATCTGAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPPEGQV*WHLSCL
Trigger: AAGACAGCTCAGATGCCACAACACCTGTCCCTCGGG...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGTGCAGCTGCTTGTGCTaGGTGAATCCGCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: AAESRPRIQATVAITPRLCSCLC*VNPLKL
Trigger: GAGTTTGAGCGGATTCACCAAGCACAAGCAGCTGCA...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCAGAACCGTCTGGCCCTaGGCATCTGTGGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: PLWHVAAESRPRIQATVARTVWP*ASVVME
Trigger: TTCCATCACCACAGATGCCAAGGGCCAGACGGTTCT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTGAGGCTTCTGTTGGCTaGAGGTCAGGAGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: AESRPRIQATVAITPRLAEASVG*RSGVTL
Trigger: CAAAGTGACTCCTGACCTCAAGCCAACAGAAGCCTC...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGAGGCTTCTGTTGGCTaGAGGTCAGGAGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: AAESRPRIQATVAITPRLEASVG*RSGVTL
Trigger: CAAAGTGACTCCTGACCTCAAGCCAACAGAAGCCTC...CAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCATGGTCTGGCCTGCTTaGGGAGGCATCACTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SGCSTMARGSRIQATNPGMVWPA*GGITPS
Trigger: ACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCAT...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCCCAACCCACTGAGGTaGGCTCCAAGGTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SGCSTMARGSRIQATNPGPNPLR*APRLPL
Trigger: CAAAGGCAACCTTGGAGCCAACCTCAGTGGGTTGGG...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS GCA 90 bp GACTGCTTTGGAGGAGCCAGAAGCTGTTCCCTGTTGGAGATGGGATaGAGGGACAGTCTGGATGCGCACCTGTGTGGCCTGACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DCFGGARSCSLLEMG*RDSLDAHLCGLTLL
Trigger: CAGCAAGGTCAGGCCACACAGGTGCGCATCCAGACTGTCCCTGCATCCCATCTCCAACAGGGAACAGCTTCTGGCTCCTCCAAAGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp CCGAGCCTTGTTGAGCGAGGTCTCCTTGTCAAACACGCCCTTCACTaGCCCCACCACAGACTCAAAGCCGTGCATGCGAAAGGTGAACGC +
Preference number: 5 (lower is better)
Translates to: PSLVERGLLVKHALH*PHHRLKAVHAKGER
Trigger: GCGTTCACCTTTCGCATGCACGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp GGCCATTACTGTCTGGGGCACTACTTTGGTCTGTGTGGCAGTGGCTaGAACCCGGATCTGCGGTCCTGCTGGCATCTGTGGCAATGTCTG +
Preference number: 5 (lower is better)
Translates to: GHYCLGHYFGLCGSG*NPDLRSCWHLWQCL
Trigger: CAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGTAGTGCCCCAGACAGTAATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp CAGTGGCCATTACTGTCTGGGGCACTACTTTGGTCTGTGTGGCAGTaGCTGGAACCCGGATCTGCGGTCCTGCTGGCATCTGTGGCAATG +
Preference number: 5 (lower is better)
Translates to: QWPLLSGALLWSVWQ*LEPGSAVLLASVAM
Trigger: CATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGTAGTGCCCCAGACAGTAATGGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS-3UTR CAA 90 bp GGGGCCACTCCGCCGGGCCATCTCCAGCAGATCACTCCGGGAAGCAAGAATTTGCATAACTGCCGGTACTaGACCACCTCGGGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: GATPPGHLQQITPGSKNLHNCRY*TTSGLK
Trigger: CTTTAACCCCGAGGTGGTCAAGTACCGGCAGTTATG...CAAATTCTTGCTTCCCGGAGTGATCTGCTGGAGATGGCCCGGCGGAGTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CAA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTTTTCATATCCGTGGTaGAAAGTGTGGGCACCACCC +
Preference number: 5 (lower is better)
Translates to: AESRPRIQATVAITPRLAFSYPW*KVWAPP
Trigger: GGGTGGTGCCCACACTTTCAACCACGGATATGAAAA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGCCGTAGTCTGCGCTTaGACGGGCACAGTGGCCATT +
Preference number: 5 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSAVVCA*TGTVAI
Trigger: AATGGCCACTGTGCCCGTCAAAGCGCAGACTACGGC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCCTGTCCTGTGACATTTaGAATGACGGCAGCCGTGGA +
Preference number: 5 (lower is better)
Translates to: PLWHVAAESRPRIQATVALSCDI*NDGSRG
Trigger: TCCACGGCTGCCGTCATTCAAAATGTCACAGGACAG...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCAGGTCCTGGGTCAATTaGACTGTGGTAACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PLWHVAAESRPRIQATVARSWVN*TVVTWD
Trigger: GTCCCAGGTTACCACAGTCAAATTGACCCAGGACCT...GGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCACTGGCTGAACTGGCCTaGGCAGGGCTATCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVALAELA*AGLSAA
Trigger: TGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAG...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAACCGAGGCCCCTTGCTaGGCGTGGGTTGCAACGGTG +
Preference number: 5 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLITEAPC*AWVATV
Trigger: CACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGT...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGCTGTGACCACGCTCTaGCCCTTCATTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FSGCSTMARGSRIQATNPAVTTL*PFIGWL
Trigger: CAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGC...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp CAGTCTGGCCAAGAACCTCCAGCTCCAGTGGTCCCTGCTCCAGGATaGAGGATTGAGATCCACGTGGAAAGAGCCCCACCTACCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QSGQEPPAPVVPAPG*RIEIHVERAPPTCL
Trigger: CAAGCAGGTAGGTGGGGCTCTTTCCACGTGGATCTCAATCCTTCATCCTGGAGCAGGGACCACTGGAGCTGGAGGTTCTTGGCCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS GCA 90 bp ACCTGTAACGCTCCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTaGTGGGACGCACCACATAGTCAGTTCTTACCCGAGGGACAGGTG +
Preference number: 5 (lower is better)
Translates to: TCNAPAPEKPVSPPP*WDAPHSQFLPEGQV
Trigger: CACCTGTCCCTCGGGTAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGGAGCGTTACAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp ACTCTGGTGCCTCCCAGGAGGCAATCCTCCATGATGCGCGTGCCATaGCCATCTCCACACGGACCAAGTTCCAGAGGATCTGTCAGCATA +
Preference number: 5 (lower is better)
Translates to: TLVPPRRQSSMMRVP*PSPHGPSSRGSVSI
Trigger: TATGCTGACAGATCCTCTGGAACTTGGTCCGTGTGGAGATGGCCATGGCACGCGCATCATGGAGGATTGCCTCCTGGGAGGCACCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000526884.1
ENST00000526940.1
ENST00000529319.5
ENST00000530278.5
ENST00000531318.1
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CCA 90 bp GGTGTGACTGGGGTGGGTGGCATACTGGAGTCACTGAGGCTCATCTaGCTCTGCTCAGAAGGGCCACTGCTAAGGACCTTTATGGAGCTC +
Preference number: 5 (lower is better)
Translates to: GVTGVGGILESLRLI*LCSEGPLLRTFMEL
Trigger: GAGCTCCATAAAGGTCCTTAGCAGTGGCCCTTCTGAGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGCCACCCACCCCAGTCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp TTGGCCAATGTGGCCATCATGTCCGGAGTGATTCGCAGAACCGTCTaGCCCTTGGCATCTGTGGTGATGGAAGAGGGCGGCAGACGCAAT +
Preference number: 5 (lower is better)
Translates to: LANVAIMSGVIRRTV*PLASVVMEEGGRRN
Trigger: ATTGCGTCTGCCGCCCTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTCTGCGAATCACTCCGGACATGATGGCCACATTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp TTGGACACAGCAGCATTCATACTGGGTAAGGACACCGCTGAAGTATaGACAGTTCCAGACCCACTGGCCACCGAGGCCCCTTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LDTAAFILGKDTAEV*TVPDPLATEAPCLA
Trigger: CGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCATACTTCAGCGGTGTCCTTACCCAGTATGAATGCTGCTGTGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS-3UTR CAA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCTCAAGGGGCTCTTCCTaGATAGCAGGAATTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SGCSTMARGSRIQATNPGSRGSS*IAGIAS
Trigger: GCTGGCAATTCCTGCTATCAAGGAAGAGCCCCTTGA...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCATTGAGCGAGGTCTCCTaGTCAAACACGCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: RVLHYGTWQQNPGHESRPLSEVS*SNTPFT
Trigger: AGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAA...TGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCATGCTCCCGAGCCTTGTaGAGCGAGGTCTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FSGCSTMARGSRIQATNPCSRAL*SEVSLS
Trigger: TGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCA...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCCTTTGCCTGTAGTGTaGCCTCCTGTCCCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIPLPVV*PPVPKR
Trigger: CCTCTTCGGGACAGGAGGCAACACTACAGGCAAAGG...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCGCCACAGCTACAGTCTaGGACACAGCAGCATTCATA +
Preference number: 5 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAATATV*DTAAFI
Trigger: TATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGGC...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCTGTGACCACGCTCTaGCCCTTCATTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVAVTTL*PFIGWL
Trigger: CAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGC...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGTTGTGAGGATGATGTaGCGGCCCAACCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: FSGCSTMARGSRIQATNPVVRMM*RPNPLR
Trigger: CCTCAGTGGGTTGGGCCGCAACATCATCCTCACAAC...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGGTAGAGAGCAGACCTaGGAACCCTGGAGTGAACCT +
Preference number: 5 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQGREQT*EPWSEP
Trigger: AGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp TCCCAGTCCCTGCACGATGCGGATCGTGGCAGCTGGTTTTGCTTCTaGAGAGGCCACTGTGCTTTTTCCCTTCTGGTCAGCCACACTCAC +
Preference number: 5 (lower is better)
Translates to: SQSLHDADRGSWFCF*RGHCAFSLLVSHTH
Trigger: GTGAGTGTGGCTGACCAGAAGGGAAAAAGCACAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 90 bp AGAGCCCCACCTACCTGCTTGATGATGTTCTGTCCTGTGACATTTTaGATGACGGCAGCCGTGGAGGCACTGGGAGCAGAGGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RAPPTCLMMFCPVTF*MTAAVEALGAEVPG
Trigger: TCCTGGGACCTCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTAGGTGGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS GCA 90 bp GGAGAGAAACTGGAAGGAACAGCTCGACTTTCTCCAGCAAGATACTaGAGGGCTGGTAGTACCAACTCAGCCCAGTTGGGGGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GEKLEGTARLSPARY*RAGSTNSAQLGAAE
Trigger: CTCTGCGGCCCCCAACTGGGCTGAGTTGGTACTACCAGCCCTGCAGTATCTTGCTGGAGAAAGTCGAGCTGTTCCTTCCAGTTTCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 90 bp ATCTGGTGCAAGAAACTGGGAGTCCTTAAGCAGTTCACAGATCTCTaGCCGTGTGCCTTCTCCATTAGGCAGTCGAGCCGCAGCGTCCCG +
Preference number: 5 (lower is better)
Translates to: IWCKKLGVLKQFTDL*PCAFSIRQSSRSVP
Trigger: CGGGACGCTGCGGCTCGACTGCCTAATGGAGAAGGCACACGGGCAGAGATCTGTGAACTGCTTAAGGACTCCCAGTTTCTTGCACCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 90 bp ACTGGGGTGGGTGGCATACTGGAGTCACTGAGGCTCATCTGGCTCTaGTCAGAAGGGCCACTGCTAAGGACCTTTATGGAGCTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TGVGGILESLRLIWL*SEGPLLRTFMELSL
Trigger: CAAGGAGAGCTCCATAAAGGTCCTTAGCAGTGGCCCTTCTGAGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGCCACCCACCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 90 bp ACCTGTAACGCTCCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTaGTGGGACGCACCACATAGTCAGTTCTTCCGAGGGACAGGTGTT +
Preference number: 5 (lower is better)
Translates to: TCNAPAPEKPVSPPP*WDAPHSQFFRGTGV
Trigger: AACACCTGTCCCTCGGAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGGAGCGTTACAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS CCA 90 bp TGTAACGCTCCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTGCTaGGACGCACCACATAGTCAGTTCTTACCCGAGGGACAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: CNAPAPEKPVSPPPC*DAPHSQFLPEGQVL
Trigger: CAACACCTGTCCCTCGGGTAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGGAGCGTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp TGTAACGCTCCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTGCTaGGACGCACCACATAGTCAGTTCTTCCGAGGGACAGGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: CNAPAPEKPVSPPPC*DAPHSQFFRGTGVV
Trigger: CACAACACCTGTCCCTCGGAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGGAGCGTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS-3UTR CAA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSGLRNP*FLLHRY
Trigger: GTACCTGTGGAGAAGAAACAATGGATTCCTTAGACC...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGGCTGTCTTCATTTTCTaGCTTACAGAAGGCCTGATC +
Preference number: 5 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSAVFIF*LTEGLI
Trigger: GATCAGGCCTTCTGTAAGCAAGAAAATGAAGACAGC...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCCCGAGGGACAGGTGTaGTGGCATCTGAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVPEGQV*WHLSCL
Trigger: AAGACAGCTCAGATGCCACAACACCTGTCCCTCGGG...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTTGCTCCCGAGCCTTGTaGAGCGAGGTCTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARCSRAL*SEVSLS
Trigger: TGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCA...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGTGCAGCTGCTTGTGCTaGGTGAATCCGCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQCSCLC*VNPLKL
Trigger: GAGTTTGAGCGGATTCACCAAGCACAAGCAGCTGCA...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTGTGGAAGGGCCGCTTTaGTTCACTGCCGATACAGGT +
Preference number: 5 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSVEGPL*FTADTG
Trigger: ACCTGTATCGGCAGTGAACAAAAGCGGCCCTTCCAC...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCAAGCTGGGGAAAGCATaGTTCCCAGATGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: SGCSTMARGSRIQATNPGKLGKA*FPDVAL
Trigger: CAATGCCACATCTGGGAACAATGCTTTCCCCAGCTT...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAAGTCTGGGGCACTACTTaGGTCTGTGTGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEVWGTT*VCVAVA
Trigger: AGCCACTGCCACACAGACCAAAGTAGTGCCCCAGAC...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGTCTGGGGCACTACTTaGGTCTGTGTGGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARVWGTT*VCVAVA
Trigger: AGCCACTGCCACACAGACCAAAGTAGTGCCCCAGAC...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGCTGTCCTGTGACATTTaGAATGACGGCAGCCGTGGA +
Preference number: 5 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQLSCDI*NDGSRG
Trigger: TCCACGGCTGCCGTCATTCAAAATGTCACAGGACAG...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAACCACAGTGGTACCTGTaGGAGTGGATGAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: NPGVNLSQGAPLWHVAAEPQWYL*EWMKGH
Trigger: GTGCCCCTTCATCCACTCCAACAGGTACCACTGTGG...TTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAGCTCCAAGGTTGCCTTaGATGATGGGGGCTGTGACC +
Preference number: 5 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSAPRLP*MMGAVT
Trigger: GGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGC...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAAGGTTGGCTCCAAGGTaGCCTTTGATGATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVARLAPR*PLMMGA
Trigger: AGCCCCCATCATCAAAGGCAACCTTGGAGCCAACCT...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCACCCAACCCACTGAGGTaGGCTCCAAGGTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSPNPLR*APRLPL
Trigger: CAAAGGCAACCTTGGAGCCAACCTCAGTGGGTTGGG...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGGAATATTCTCCTAGATaGGTAGAGAGCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSEYSPR*VESRPW
Trigger: CCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp CCAGTGATTGCCACCTGCTTGATGATGTTCTGTCCTGTGACATTTTaGATGACGGCAGCCGTGGAGGCACTGGGAGCAGAGGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PVIATCLMMFCPVTF*MTAAVEALGAEVPG
Trigger: TCCTGGGACCTCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTGGCAATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp CCTCCTGTCCCGAAGAGGTCCTGGGTCAATTTGACTGTGGTAACCTaGGACTTGGCCAATGTGGCCATCATGTCCGGAGTGATTCGCAGA +
Preference number: 5 (lower is better)
Translates to: PPVPKRSWVNLTVVT*DLANVAIMSGVIRR
Trigger: TCTGCGAATCACTCCGGACATGATGGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGGGACAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp GAGATGCCTTTGCCTGTAGTGTTGCCTCCTGTCCCGAAGAGGTCCTaGGTCAATTTGACTGTGGTAACCTGGGACTTGGCCAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: EMPLPVVLPPVPKRS*VNLTVVTWDLANVA
Trigger: GGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGGGACAGGAGGCAACACTACAGGCAAAGGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp CCTTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTaGCTGATCACAGAGAGGGGAACTGTGATCCGTGTAGGCAACTTC +
Preference number: 5 (lower is better)
Translates to: PLMMGAVTTLLPFIG*LITERGTVIRVGNF
Trigger: GAAGTTGCCTACACGGATCACAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp GTTGCCTTTGATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTaGCTGGCTGATCACAGAGAGGGGAACTGTGATCCGTGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: VAFDDGGCDHALALH*LADHREGNCDPCRQ
Trigger: TTGCCTACACGGATCACAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS-3UTR CAA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCACATAACTGCCGGTACTaGACCACCTCGGGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: FSGCSTMARGSRIQATNPHNCRY*TTSGLK
Trigger: CTTTAACCCCGAGGTGGTCAAGTACCGGCAGTTATG...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GCAGTTTTCATATCCGTGGTTGAAAGTGTGGGCACCACCCGCAGGGGCACCGCATTTTCATATCCGTGGTaGAAAGTGTGGGCACCACCC +
Preference number: 5 (lower is better)
Translates to: AVFISVVESVGTTRRGTAFSYPW*KVWAPP
Trigger: GGGTGGTGCCCACACTTTCAACCACGGATATGAAAA...TGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS-3UTR CAA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCGAGTCATGATGTCATaGAGAGTCAGGTCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIRVMMS*RVRSPV
Trigger: GACAGGGGACCTGACTCTCAATGACATCATGACTCG...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCTGGAAGATATTTCATaGATTCCAAGGCAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSLEDIS*IPRQGL
Trigger: CAAGCCTTGCCTTGGAATCAATGAAATATCTTCCAG...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCTTTATGGAGCTCTCCTaGCTACTGGACTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: SGCSTMARGSRIQATNPGFMELS*LLDFTL
Trigger: CAAGGTGAAGTCCAGTAGCAAGGAGAGCTCCATAAA...GCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTAGAACCGTCTGGCCCTaGGCATCTGTGGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARRTVWP*ASVVME
Trigger: TTCCATCACCACAGATGCCAAGGGCCAGACGGTTCT...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAAGGTCCTGGGTCAATTaGACTGTGGTAACCTGGGAC +
Preference number: 5 (lower is better)
Translates to: FSGCSTMARGSRIQATNPRSWVN*TVVTWD
Trigger: GTCCCAGGTTACCACAGTCAAATTGACCCAGGACCT...TGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTTCGTGGCAGCTGGTTTaGCTTCTGAAGAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARSWQLV*LLKRPL
Trigger: CAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGA...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTACCGAGGCCCCTTGCTaGGCGTGGGTTGCAACGGTG +
Preference number: 5 (lower is better)
Translates to: NTILMENQPIRCVHSATGTEAPC*AWVATV
Trigger: CACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGT...ACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGAGGTTGGCTCCAAGGTaGCCTTTGATGATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVRLAPR*PLMMGA
Trigger: AGCCCCCATCATCAAAGGCAACCTTGGAGCCAACCT...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGAAACTAACAGGCTTATaGCCAGCAATGAGCTTAGTG +
Preference number: 5 (lower is better)
Translates to: RGSRIQATNPGHRCHHPSKLTGL*PAMSLV
Trigger: CACTAAGCTCATTGCTGGCAATAAGCCTGTTAGTTT...CGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCGAATATTCTCCTAGATaGGTAGAGAGCAGACCTTGG +
Preference number: 5 (lower is better)
Translates to: QGAPLWHVAAESRPRIQAEYSPR*VESRPW
Trigger: CCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC...GGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp CCAAGAACCTCCAGCTCCAGTGGTCCCTGCTCCAGGATGAAGGATTaGGATCCACGTGGAAAGAGCCCCACCTACCTGCTTGATGATGTT +
Preference number: 5 (lower is better)
Translates to: PRTSSSSGPCSRMKD*DPRGKSPTYLLDDV
Trigger: AACATCATCAAGCAGGTAGGTGGGGCTCTTTCCACGTGGATCTCAATCCTTCATCCTGGAGCAGGGACCACTGGAGCTGGAGGTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS CCA 90 bp TGGATGCGGAAGTTAGTGGCTGTGAGTGGAATGCTGTTGCCTGTTTaGGGCTTCACACCAAGCTGCCCAGTGATTGCCACCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: WMRKLVAVSGMLLPV*GFTPSCPVIATCLM
Trigger: CATCAAGCAGGTGGCAATCACTGGGCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATTCCACTCACAGCCACTAACTTCCGCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp CCCCAGAAGCCACAGCTACAGTCTTGGACACAGCAGCATTCATACTaGGTAAGGACACCGCTGAAGTATGGACAGTTCCAGACCCACTGG +
Preference number: 5 (lower is better)
Translates to: PQKPQLQSWTQQHSY*VRTPLKYGQFQTHW
Trigger: CCAGTGGGTCTGGAACTGTCCATACTTCAGCGGTGTCCTTACCCAGTATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGGCTTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp CTGAGAGTCGAAGATGACAAATCTTCTTCCCATGGGCATGCAGTCTaGCCAAGAACCTCCAGCTCCAGTGGTCCCTGCTCCAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: LRVEDDKSSSHGHAV*PRTSSSSGPCSRMK
Trigger: CTTCATCCTGGAGCAGGGACCACTGGAGCTGGAGGTTCTTGGCCAGACTGCATGCCCATGGGAAGAAGATTTGTCATCTTCGACTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS-3UTR CAA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCAATTCCAAGGCAAGGCTaGAGGTCTTCAAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSIPRQG*RSSRGS
Trigger: AGAGCCCCTTGAAGACCTCAAGCCTTGCCTTGGAAT...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCTTGAGCGAGGTCTCCTaGTCAAACACGCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLLSEVS*SNTPFT
Trigger: AGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAA...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp CTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCACTACTGGACTTCACCTaGGATGGGGGCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LLSQDRPGMVFHGSHPLSLLDFT*DGGLGF
Trigger: AAAACCCAAGCCCCCATCCAAGGTGAAGTCCAGTAG...TGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTAAGCTGGGGAAAGCATaGTTCCCAGATGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: VPSQPGQTRHGLSRKPSSKLGKA*FPDVAL
Trigger: CAATGCCACATCTGGGAACAATGCTTTCCCCAGCTT...AGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGAATGCTGTTGCCTGTTaGGGGCTTCACACCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVNAVAC*GLHTKL
Trigger: CAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATT...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCTGCATGTACTGGATaGGAAGTGACGTGTAAGGTG +
Preference number: 5 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVAAACTG*EVTCKV
Trigger: CACCTTACACGTCACTTCCAATCCAGTACATGCAGC...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAAGGTCAGGAGTCACTTaGACCACAGTGGTACCTGTT +
Preference number: 5 (lower is better)
Translates to: PWNPGVNLSQGAPLWHVARSGVT*TTVVPV
Trigger: AACAGGTACCACTGTGGTCAAAGTGACTCCTGACCT...TGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp AGCCACACTCACGCCAAGAGCTGGCATCAAGCGAAAAGCCGAACTTaGGGCTTCTGTTGGCTTGAGGTCAGGAGTCACTTTGACCACAGT +
Preference number: 5 (lower is better)
Translates to: SHTHAKSWHQAKSRT*GFCWLEVRSHFDHS
Trigger: ACTGTGGTCAAAGTGACTCCTGACCTCAAGCCAACAGAAGCCTCAAGTTCGGCTTTTCGCTTGATGCCAGCTCTTGGCGTGAGTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 90 bp TGCCTGTTTAGGAGACGGAGCTGTAGTCACAACAACAGTGGAGACTaGTTTGGAGGAGCCAGAAGCTGTTCCCTGTTGGAGATGGGATGC +
Preference number: 5 (lower is better)
Translates to: CLFRRRSCSHNNSGD*FGGARSCSLLEMGC
Trigger: GCATCCCATCTCCAACAGGGAACAGCTTCTGGCTCCTCCAAAGCAGTCTCCACTGTTGTTGTGACTACAGCTCCGTCTCCTAAACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 90 bp ACGCAATACATCCTTACCCTGGATGCGGAAGTTAGTGGCTGTGAGTaGAATGCTGTTGCCTGTTTGGGGCTTCACACCAAGCTGCCCAGT +
Preference number: 5 (lower is better)
Translates to: TQYILTLDAEVSGCE*NAVACLGLHTKLPS
Trigger: ACTGGGCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATTCCACTCACAGCCACTAACTTCCGCATCCAGGGTAAGGATGTATTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp TCTGTGGTGATGGAAGAGGGCGGCAGACGCAATACATCCTTACCCTaGATGCGGAAGTTAGTGGCTGTGAGTGGAATGCTGTTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SVVMEEGGRRNTSLP*MRKLVAVSGMLLPV
Trigger: AACAGGCAACAGCATTCCACTCACAGCCACTAACTTCCGCATCCAGGGTAAGGATGTATTGCGTCTGCCGCCCTCTTCCATCACCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS-3UTR CAA 90 bp GGTCCCTTCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: GPFSARTDQAWSFTEAILGLRNP*FLLHRY
Trigger: GTACCTGTGGAGAAGAAACAATGGATTCCTTAGACC...GAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGAAGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CAGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTCGCTTGTACTGTGACTaGAAGCATAACTGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: QTLEPWSEPFSGCSTMARRLYCD*KHNCRY
Trigger: GTACCGGCAGTTATGCTTCAAGTCACAGTACAAGCG...ACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCAGGGGACCCACTCTACCTCGCTGCCTACGATGAATTCCCATCTTACAGCCTCTTTTCATATCCGTGGTaGAAAGTGTGGGCACCACCC +
Preference number: 5 (lower is better)
Translates to: SGDPLYLAAYDEFPSYSLFSYPW*KVWAPP
Trigger: GGGTGGTGCCCACACTTTCAACCACGGATATGAAAA...GAGGCTGTAAGATGGGAATTCATCGTAGGCAGCGAGGTAGAGTGGGTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp GCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACCCCTCGCCTGGCTTCCTCTGCCTCTGATTaGATCGTTTTTATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: AESRPRIQATVAITPRLASSASD*IVFIFF
Trigger: GAAGAAAATAAAAACGATCAAATCAGAGGCAGAGGA...AGCCAGGCGAGGGGTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCTGTCTTCATTTTCTaGCTTACAGAAGGCCTGATC +
Preference number: 5 (lower is better)
Translates to: SQGAPLWHVAAESRPRIQAVFIF*LTEGLI
Trigger: GATCAGGCCTTCTGTAAGCAAGAAAATGAAGACAGC...CTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGAACGCCTTATGGGGTaGGCTATACCTGTAACGCTC +
Preference number: 5 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIERLMG*AIPVTL
Trigger: GAGCGTTACAGGTATAGCCAACCCCATAAGGCGTTC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AAATTTTCTGGACACAAAACTCCTATCCAGACCACTAGTCATGGAGAAGACCAGGGCCACCGAGGCCCCTaGCTTGGCGTGGGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: KFSGHKTPIQTTSHGEDQGHRGP*LGVGCN
Trigger: GTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCC...CTGGTCTTCTCCATGACTAGTGGTCTGGATAGGAGTTTTGTGTCCAGAAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTGTCAATTTCCTTATTaGAGGAAGGGAAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: PWSEPFSGCSTMARGSRICQFPY*RKGSWT
Trigger: GGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACA...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp CCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGGCAGCAGAATCTTCATTATCTTGGGATaGGCCAAGCAACTTCCACTG +
Preference number: 5 (lower is better)
Translates to: PWSEPFSGCSTMARGSRIFIILG*AKQLPL
Trigger: CAGTGGAAGTTGCTTGGCCAATCCCAAGATAATGAA...GATTCTGCTGCCACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAGTGATTGCCACCTGCTaGATGATGTTCTGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIVIATC*MMFCPV
Trigger: CACAGGACAGAACATCATCAAGCAGGTGGCAATCAC...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTGGACGTCCATGTGAACAGGCTTGCCAAGAAGGACAAAGTGGGCAGGTAAAGAATGCTGTTGCCTGTTaGGGGCTTCACACCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SGRPCEQACQEGQSGQVKNAVAC*GLHTKL
Trigger: CAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATT...CTTTACCTGCCCACTTTGTCCTTCTTGGCAAGCCTGTTCACATGGACGTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATAAGGTCAGGAGTCACTTaGACCACAGTGGTACCTGTT +
Preference number: 5 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIRSGVT*TTVVPV
Trigger: AACAGGTACCACTGTGGTCAAAGTGACTCCTGACCT...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp ATCCCAACACCCCTATCTTTAAGAGGCAGTGCCAAGCGAATCCCATTTCAGGGGACAGTGGAGACTGCTTaGGAGGAGCCAGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: IPTPLSLRGSAKRIPFQGTVETA*EEPEAV
Trigger: AACAGCTTCTGGCTCCTCCAAAGCAGTCTCCACTGT...CCCCTGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGATAGGGGTGTTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS GCA 90 bp GGGCTTGGGTTTTTGCTGAAGAGCTTTTCTGGCTTTAGCTGCAGCTaGTTGTGCTTGGTGAATCCGCTCAAACTCTTCTTCACTCCGGTC +
Preference number: 5 (lower is better)
Translates to: GLGFLLKSFSGFSCS*LCLVNPLKLFFTPV
Trigger: GACCGGAGTGAAGAAGAGTTTGAGCGGATTCACCAAGCACAAGCAGCTGCAGCTAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp GAGGAAACTAACAGGCTTATTGCCAGCAATGAGCTTAGTGCCTGCTaGCATAGTTGTGAGGATGATGTTGCGGCCCAACCCACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: EETNRLIASNELSAC*HSCEDDVAAQPTEV
Trigger: AACCTCAGTGGGTTGGGCCGCAACATCATCCTCACAACTATGCCAGCAGGCACTAAGCTCATTGCTGGCAATAAGCCTGTTAGTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS-3UTR CAA 90 bp ATGGCACGTGGCAGCAGAATCCAGGCCACGAATCCAGGCCACCGTTGCCATCACTCCTCTGCCTCTGATTaGATCGTTTTTATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: MARGSRIQATNPGHRCHHSSASD*IVFIFF
Trigger: GAAGAAAATAAAAACGATCAAATCAGAGGCAGAGGA...GTGATGGCAACGGTGGCCTGGATTCGTGGCCTGGATTCTGCTGCCACGTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp GTTTCTTCTCCACAGGTACTCACGCCAGGTGTCAATTTCCTTATTTaGGGAAGGGAAGCTGGACCAGGTCCTCCCTCCCGTTATTTCCAA +
Preference number: 5 (lower is better)
Translates to: VSSPQVLTPGVNFLI*GREAGPGPPSRYFQ
Trigger: TTGGAAATAACGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACACCTGGCGTGAGTACCTGTGGAGAAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446488.7
ENST00000531755.5
ENST00000682444.1
CDS TCA 90 bp AACATGGCAAAACCCCTTCTCACGCCAGGTGTCAATTTCCTTATTTaGGGAAGGGAAGCTGGACCAGGTCCTCCCTCCCGTTATTTCCAA +
Preference number: 5 (lower is better)
Translates to: NMAKPLLTPGVNFLI*GREAGPGPPSRYFQ
Trigger: TTGGAAATAACGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACACCTGGCGTGAGAAGGGGTTTTGCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524746.5
ENST00000526884.1
ENST00000529319.5
ENST00000532225.5
CDS CCA 90 bp TGGCCATCTCCACACGGACCAAGTTCCAGAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTTTCTTCTCCACAGGTACTCACGCCA +
Preference number: 5 (lower is better)
Translates to: WPSPHGPSSRGSVSI*SKESIVSSPQVLTP
Trigger: TGGCGTGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGGAACTTGGTCCGTGTGGAGATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446488.7
ENST00000531755.5
ENST00000682444.1
CDS-3UTR CAA 90 bp AATACAATCCTCATGGAGAACCAGCCTATTCGCTGTGTGCACTCTGCAACTGGTCATAACTGCCGGTACTaGACCACCTCGGGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: NTILMENQPIRCVHSATGHNCRY*TTSGLK
Trigger: CTTTAACCCCGAGGTGGTCAAGTACCGGCAGTTATG...ACCAGTTGCAGAGTGCACACAGCGAATAGGCTGGTTCTCCATGAGGATTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp AGACCTTGGAACCCTGGAGTGAACCTTTCTCAGGGTGCTCCACTATGGCACGTGCTGGAAGATATTTCATaGATTCCAAGGCAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: RPWNPGVNLSQGAPLWHVLEDIS*IPRQGL
Trigger: CAAGCCTTGCCTTGGAATCAATGAAATATCTTCCAG...CACGTGCCATAGTGGAGCACCCTGAGAAAGGTTCACTCCAGGGTTCCAAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp TCTCAGCCAGGACAGACCAGGCATGGTCTTTCACGGAAGCCATCCTCTCTCATATTCATTATCTTGGGATaGGCCAAGCAACTTCCACTG +
Preference number: 5 (lower is better)
Translates to: SQPGQTRHGLSRKPSSLIFIILG*AKQLPL
Trigger: CAGTGGAAGTTGCTTGGCCAATCCCAAGATAATGAA...TATGAGAGAGGATGGCTTCCGTGAAAGACCATGCCTGGTCTGTCCTGGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACTACTGGACTTCACCTaGGATGGGGGCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQLLDFT*DGGLGF
Trigger: AAAACCCAAGCCCCCATCCAAGGTGAAGTCCAGTAG...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTGTGGAAGGGCCGCTTTaGTTCACTGCCGATACAGGT +
Preference number: 5 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLVEGPL*FTADTG
Trigger: ACCTGTATCGGCAGTGAACAAAAGCGGCCCTTCCAC...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCCCACAGTGGTACCTGTaGGAGTGGATGAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFPQWYL*EWMKGH
Trigger: GTGCCCCTTCATCCACTCCAACAGGTACCACTGTGG...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACTCGTGGCAGCTGGTTTaGCTTCTGAAGAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNSWQLV*LLKRPL
Trigger: CAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGA...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp ATCCCAACACCCCTATCTTTAAGAGGCAGTGCCAAGCGAATCCCATTTCAGGGGCAGAACTCTGGCTTGTaGGACGTAACTGGTAATTCC +
Preference number: 5 (lower is better)
Translates to: IPTPLSLRGSAKRIPFQGQNSGL*DVTGNS
Trigger: GGAATTACCAGTTACGTCCAACAAGCCAGAGTTCTG...CCCCTGAAATGGGATTCGCTTGGCACTGCCTCTTAAAGATAGGGGTGTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS CCA 90 bp TGGCCATCTCCACACGGACCAAGTTCCAGAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTTTCTTCTCCACAGGTACTCTGGACA +
Preference number: 5 (lower is better)
Translates to: WPSPHGPSSRGSVSI*SKESIVSSPQVLWT
Trigger: TGTCCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGGAACTTGGTCCGTGTGGAGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS CCA 90 bp GCTCTTTTCTCAGAATGCTCCTACAGTAACTCAATCTCAGTACTTTaGGAGGTCCAGGCGGGCAGTCCCCTTGAATCCATGAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: ALFSECSYSNSISVL*EVQAGSPLESMSLR
Trigger: TCTCAAACTCATGGATTCAAGGGGACTGCCCGCCTGGACCTCCCAAAGTACTGAGATTGAGTTACTGTAGGAGCATTCTGAGAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526884.1
CDS CCA 90 bp TGGCCATCTCCACACGGACCAAGTTCCAGAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTTTCTTCTCCACAGGTACTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: WPSPHGPSSRGSVSI*SKESIVSSPQVLWK
Trigger: CTTCCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGGAACTTGGTCCGTGTGGAGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526884.1
ENST00000531318.1
ENST00000532225.5
CDS-3UTR CAA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTATTCCAAGGCAAGGCTaGAGGTCTTCAAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLIPRQG*RSSRGS
Trigger: AGAGCCCCTTGAAGACCTCAAGCCTTGCCTTGGAAT...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACACAGTGGAGACTGCTTaGGAGGAGCCAGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNTVETA*EEPEAV
Trigger: AACAGCTTCTGGCTCCTCCAAAGCAGTCTCCACTGT...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS TCA 90 bp GTTCACGTTGAGAATCACTTAACACTTCCTGCCATGTTGAGAGGCTaGCAACATCAAAGAAGATCTCAGGATCCTCCAGAAGGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: VHVENHLTLPAMLRG*QHQRRSQDPPEGPR
Trigger: CCGAGGACCTTCTGGAGGATCCTGAGATCTTCTTTGATGTTGTCAGCCTCTCAACATGGCAGGAAGTGTTAAGTGATTCTCAACGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000526884.1
ENST00000526940.1
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CCA 90 bp AAGGAATCCATTGTTTCTTCTCCACAGGTACTAATCTCAGTACTTTaGGAGGTCCAGGCGGGCAGTCCCCTTGAATCCATGAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: KESIVSSPQVLISVL*EVQAGSPLESMSLR
Trigger: TCTCAAACTCATGGATTCAAGGGGACTGCCCGCCTGGACCTCCCAAAGTACTGAGATTAGTACCTGTGGAGAAGAAACAATGGATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524746.5
ENST00000529319.5
CDS-3UTR CAA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCCGAGTCATGATGTCATaGAGAGTCAGGTCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSARVMMS*RVRSPV
Trigger: GACAGGGGACCTGACTCTCAATGACATCATGACTCG...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCGAACGCCTTATGGGGTaGGCTATACCTGTAACGCTC +
Preference number: 5 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSAERLMG*AIPVTL
Trigger: GAGCGTTACAGGTATAGCCAACCCCATAAGGCGTTC...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp CTGGTTTGCAACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACCAGATGTGGCATTGTaGGTGAAGACACCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LVCNSCSGAEQKVYSELQPDVAL*VKTPEE
Trigger: TTCTTCTGGTGTCTTCACCAACAATGCCACATCTGG...TTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTTGCAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp ACAGAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACGTGATTGCCACCTGCTaGATGATGTTCTGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: TEYSPRLVESRPWNPGVNVIATC*MMFCPV
Trigger: CACAGGACAGAACATCATCAAGCAGGTGGCAATCAC...GTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTGCCACAGCTACAGTCTaGGACACAGCAGCATTCATA +
Preference number: 5 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLATATV*DTAAFI
Trigger: TATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGGC...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS CCA 90 bp TGGCCATCTCCACACGGACCAAGTTCCAGAGGATCTGTCAGCATATaGTCTAAGGAATCCATTGTTTCTTCTCCACAGGTACTAATCTCA +
Preference number: 5 (lower is better)
Translates to: WPSPHGPSSRGSVSI*SKESIVSSPQVLIS
Trigger: TGAGATTAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGGAACTTGGTCCGTGTGGAGATGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524746.5
ENST00000529319.5
CDS-3UTR CAA 90 bp AATACTTTAGGCTTCAGGGCCATCCAGTCTCTATGTCAACTACTCAATTCTGCCCGCTTGTACTGTGACTaGAAGCATAACTGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: NTLGFRAIQSLCQLLNSARLYCD*KHNCRY
Trigger: GTACCGGCAGTTATGCTTCAAGTCACAGTACAAGCG...GGCAGAATTGAGTAGTTGACATAGAGACTGGATGGCCCTGAAGCCTAAAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS-3UTR CAA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTTTTATGGAGCTCTCCTaGCTACTGGACTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLFMELS*LLDFTL
Trigger: CAAGGTGAAGTCCAGTAGCAAGGAGAGCTCCATAAA...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp GAATATTCTCCTAGATTGGTAGAGAGCAGACCTTGGAACCCTGGAGTGAACCTTCCAGATGTGGCATTGTaGGTGAAGACACCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: EYSPRLVESRPWNPGVNLPDVAL*VKTPEE
Trigger: TTCTTCTGGTGTCTTCACCAACAATGCCACATCTGG...AAGGTTCACTCCAGGGTTCCAAGGTCTGCTCTCTACCAATCTAGGAGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000446488.7
ENST00000524794.5
CDS-3UTR CAA 90 bp AACTCTTGCTCTGGAGCAGAGCAGAAGGTATACTCTGAACTGCAACAAAGTTTCGCTGCATGTACTGGATaGGAAGTGACGTGTAAGGTG +
Preference number: 5 (lower is better)
Translates to: NSCSGAEQKVYSELQQSFAACTG*EVTCKV
Trigger: CACCTTACACGTCACTTCCAATCCAGTACATGCAGC...GAAACTTTGTTGCAGTTCAGAGTATACCTTCTGCTCTGCTCCAGAGCAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446488.7
CDS CCA 90 bp GCCAAGCAACTTCCACTGCTGGGTTTTCTCTTTGAATTCAACAAATaGAGAGAAACTGGAAGGAACAGCTCGACTTTCTCCAGCAAGATA +
Preference number: 5 (lower is better)
Translates to: AKQLPLLGFLFEFNK*RETGRNSSTFSSKI
Trigger: TATCTTGCTGGAGAAAGTCGAGCTGTTCCTTCCAGTTTCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 90 bp TATCTTGGGATTGGCCAAGCAACTTCCACTGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGAAACTGGAAGGAACAGCTCGACTTT +
Preference number: 5 (lower is better)
Translates to: YLGIGQATSTAGFSL*IQQMERNWKEQLDF
Trigger: AAAGTCGAGCTGTTCCTTCCAGTTTCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGGCCAATCCCAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 90 bp AGCATATGGTCTAAGGAATCCATTGTTTCTTCTCCACAGGTACTCTaGACAAAGACATGCATCTTGAGACAGAAAGGCAGAAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: SIWSKESIVSSPQVL*TKTCILRQKGRNSR
Trigger: CCTGGAATTTCTGCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS GCA 90 bp AAGGAATCCATTGTTTCTTCTCCACAGGTACTCTGGACAAAGACATaGATCTTGAGACAGAAAGGCAGAAATTCCAGGGATCTAGTTGAT +
Preference number: 5 (lower is better)
Translates to: KESIVSSPQVLWTKT*ILRQKGRNSRDLVD
Trigger: ATCAACTAGATCCCTGGAATTTCTGCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS-3UTR CAA 90 bp TTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATACACAAAACCGCTCTTaGCTGCCTCAGTATCTCGGA +
Preference number: 5 (lower is better)
Translates to: LCRCWLQADAGYKLNSYYTQNRS*LPQYLG
Trigger: TCCGAGATACTGAGGCAGCAAAGAGCGGTTTTGTGT...ATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS-3UTR CAA 90 bp TTATGTAGATGCTGGTTACAAGCTGATGCTGGTTACAAGCTGAATTCATATTATGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: LCRCWLQADAGYKLNSYYGLRNP*FLLHRY
Trigger: GTACCTGTGGAGAAGAAACAATGGATTCCTTAGACC...ATAATATGAATTCAGCTTGTAACCAGCATCAGCTTGTAACCAGCATCTACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS TCA 72 bp ACTTCCCAGCCTGGGACGTGGACACAACCGTGGTGCTaGCAGGGACCTGCCGCACGGTGGGGGCTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: TSQPGTWTQPWC*QGPAARWGLLC
Trigger: GCACAGGAGCCCCCACCGTGCGGCAGGTCCCTGTCAGCACCACGGTTGTGTCCACGTCCCAGGCTGGGAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp CCCTGTCTGCCCGGGTCCAGGCCGCTGCACAGTGGCTaGCGTAGTCTGCGCTTTGACGGGCACAGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: PCLPGSRPLHSG*RSLRFDGHSGH
Trigger: ATGGCCACTGTGCCCGTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCAGACAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS GCA 72 bp GCTGTGGCAGGGAGACTTGTCACCGTGAGCCCTGTCTaGCCGGGTCCAGGCCGCTGCACAGTGGCTGCCGTA +
Preference number: 6 (lower is better)
Translates to: AVAGRLVTVSPV*PGPGRCTVAAV
Trigger: TACGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCAGACAGGGCTCACGGTGACAAGTCTCCCTGCCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CCA 72 bp GGCTGGAACCCGGATCTGCGGTCCTGCTGGCATCTGTaGCAATGTCTGTGCCGGCCCTCCCGACTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GWNPDLRSCWHL*QCLCRPSRLLG
Trigger: CCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp GGCATCTGTGGCAATGTCTGTGCCGGCCCTCCCGACTaGTGGGGAACAGCAGGAAGGCTAGGCTGGGCCACC +
Preference number: 6 (lower is better)
Translates to: GICGNVCAGPPD*WGTAGRLGWAT
Trigger: GGTGGCCCAGCCTAGCCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 72 bp GTCGAGCCGCAGCGTCCCGAACAAGAGACAGAATGGTaGCGTAGGCAGGCCGGTCGGAGCGCAGCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: VEPQRPEQETEW*RRQAGRSAAGS
Trigger: ACTCCCTGCTGCGCTCCGACCGGCCTGCCTACGTCACCATTCTGTCTCTTGTTCGGGACGCTGCGGCTCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp CTGTGTGGCAGTGGCTGGAACCCGGATCTGCGGTCCTaGTGGCATCTGTGGCAATGTCTGTGCCGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LCGSGWNPDLRS*WHLWQCLCRPS
Trigger: GGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp CCCACTGGCCACCGAGGCCCCTTGCTTGGCGTGGGTTaGAACGGTGATGGTCTGGCCTGCTTTGGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: PTGHRGPLLGVG*NGDGLACFGRH
Trigger: ATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp TGTGGCAGTGGCTGGAACCCGGATCTGCGGTCCTGCTaGCATCTGTGGCAATGTCTGTGCCGGCCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: CGSGWNPDLRSC*HLWQCLCRPSR
Trigger: TCGGGAGGGCCGGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp GGCCGGTCGGAGCGCAGCAGGGAGTGCTCCCGAGCCTaGTTGAGCGAGGTCTCCTTGTCAAACACGCCCTTC +
Preference number: 6 (lower is better)
Translates to: GRSERSRECSRA*LSEVSLSNTPF
Trigger: GAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTCCGACCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 72 bp CCACCGAGGCCCCTTGCTTGGCGTGGGTTGCAACGGTaGTGGTCTGGCCTGCTTTGGGAGGCATCACTCCCA +
Preference number: 6 (lower is better)
Translates to: PPRPLAWRGLQR*WSGLLWEASLP
Trigger: TGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 72 bp AGGTCCTCCCTCCCGTTATTTCCAATTCTGGAATCCTaGACCGCGGGCGCCGGCCCCCTAACCCGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RSSLPLFPILES*TAGAGPLTRSP
Trigger: AGGGCTGCGGGTTAGGGGGCCGGCGCCCGCGGTTCAGGATTCCAGAATTGGAAATAACGGGAGGGAGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000526884.1
ENST00000529319.5
ENST00000532225.5
ENST00000682444.1
CDS GCA 72 bp TGGACAGTTCCAGACCCACTGGCCACCGAGGCCCCTTaGTTGGCGTGGGTTGCAACGGTGATGGTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: WTVPDPLATEAP*LAWVATVMVWP
Trigger: AGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp ATCTGTGGCAATGTCTGTGCCGGCCCTCCCGACTGCTaGGGAACAGCAGGAAGGCTAGGCTGGGCCACCACT +
Preference number: 6 (lower is better)
Translates to: ICGNVCAGPPDC*GTAGRLGWATT
Trigger: AGTGGTGGCCCAGCCTAGCCTTCCTGCTGTTCCCCAGCAGTCGGGAGGGCCGGCACAGACATTGCCACAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp GGCACTGGGAGCAGAGGTCCCAGGAGAACTCGTGGCTaGCTTACTCACAGGGCTGGCTGTGGCAGGGAGACT +
Preference number: 6 (lower is better)
Translates to: GTGSRGPRRTRG*LTHRAGCGRET
Trigger: AGTCTCCCTGCCACAGCCAGCCCTGTGAGTAAGCCAGCCACGAGTTCTCCTGGGACCTCTGCTCCCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CCA 72 bp TGGAGGCACTGGGAGCAGAGGTCCCAGGAGAACTCGTaGCTGGCTTACTCACAGGGCTGGCTGTGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WRHWEQRSQENS*LAYSQGWLWQG
Trigger: TCCCTGCCACAGCCAGCCCTGTGAGTAAGCCAGCCACGAGTTCTCCTGGGACCTCTGCTCCCAGTGCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CCA 72 bp GCCCCTTGCTTGGCGTGGGTTGCAACGGTGATGGTCTaGCCTGCTTTGGGAGGCATCACTCCCAGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: APCLAWVATVMV*PALGGITPSPC
Trigger: GCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp CCAGGCCGCTGCACAGTGGCTGCCGTAGTCTGCGCTTaGACGGGCACAGTGGCCATTACTGTCTGGGGCACT +
Preference number: 6 (lower is better)
Translates to: PGRCTVAAVVCA*TGTVAITVWGT
Trigger: AGTGCCCCAGACAGTAATGGCCACTGTGCCCGTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CAA 72 bp ACAGTTCCAGACCCACTGGCCACCGAGGCCCCTTGCTaGGCGTGGGTTGCAACGGTGATGGTCTGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: TVPDPLATEAPC*AWVATVMVWPA
Trigger: AGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp TGCCCGGGTCCAGGCCGCTGCACAGTGGCTGCCGTAGTCTGCGCTTaGACGGGCACAGTGGCCATTACTGTCTGGGGCACTACTTTGGTC +
Preference number: 6 (lower is better)
Translates to: CPGPGRCTVAAVVCA*TGTVAITVWGTTLV
Trigger: GACCAAAGTAGTGCCCCAGACAGTAATGGCCACTGTGCCCGTCAAAGCGCAGACTACGGCAGCCACTGTGCAGCGGCCTGGACCCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CAA 90 bp GCCCCTTGCTTGGCGTGGGTTGCAACGGTGATGGTCTGGCCTGCTTaGGGAGGCATCACTCCCAGTCCCTGCACGATGCGGATCGTGGCA +
Preference number: 6 (lower is better)
Translates to: APCLAWVATVMVWPA*GGITPSPCTMRIVA
Trigger: TGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp GAGCGCAGCAGGGAGTGCTCCCGAGCCTTGTTGAGCGAGGTCTCCTaGTCAAACACGCCCTTCACTGGCCCCACCACAGACTCAAAGCCG +
Preference number: 6 (lower is better)
Translates to: ERSRECSRALLSEVS*SNTPFTGPTTDSKP
Trigger: CGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 90 bp GAAGTATGGACAGTTCCAGACCCACTGGCCACCGAGGCCCCTTGCTaGGCGTGGGTTGCAACGGTGATGGTCTGGCCTGCTTTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: EVWTVPDPLATEAPC*AWVATVMVWPALGG
Trigger: GCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCATACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 72 bp GGTCGGAGCGCAGCAGGGAGTGCTCCCGAGCCTTGTTaGGCGAGGTCTCCTTGTCAAACACGCCCTTCACTG +
Preference number: 6 (lower is better)
Translates to: GRSAAGSAPEPC*ARSPCQTRPSL
Trigger: CAGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp AGGGGGCCTGTGAGAGAGGTGCGACCCCTTCAGTACTaGTTAGCGGCTCGGCCAGGTCCTCTGCCTCTGATT +
Preference number: 6 (lower is better)
Translates to: RGPVREVRPLQY*LAARPGPLPLI
Trigger: AATCAGAGGCAGAGGACCTGGCCGAGCCGCTAAGCAGTACTGAAGGGGTCGCACCTCTCTCACAGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp CCCGGGCGGCAGCCTGAGAACTGGGTGCAGTCTGGCTaGAAGCTGGGGAAAGCATTGTTCCCAGATGTGGCA +
Preference number: 6 (lower is better)
Translates to: PGRQPENWVQSG*KLGKALFPDVA
Trigger: TGCCACATCTGGGAACAATGCTTTCCCCAGCTTCCAGCCAGACTGCACCCAGTTCTCAGGCTGCCGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp CGGTCGGAGCGCAGCAGGGAGTGCTCCCGAGCCTTGTaGAGCGAGGTCTCCTTGTCAAACACGCCCTTCACT +
Preference number: 6 (lower is better)
Translates to: RSERSRECSRAL*SEVSLSNTPFT
Trigger: AGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTCCCTGCTGCGCTCCGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp TTGGCGTGGGTTGCAACGGTGATGGTCTGGCCTGCTTaGGGAGGCATCACTCCCAGTCCCTGCACGATGCGG +
Preference number: 6 (lower is better)
Translates to: LAWVATVMVWPA*GGITPSPCTMR
Trigger: CCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp GTGGCCATCATGTCCGGAGTGATTCGCAGAACCGTCTaGCCCTTGGCATCTGTGGTGATGGAAGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: VAIMSGVIRRTV*PLASVVMEEGG
Trigger: GCCGCCCTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTCTGCGAATCACTCCGGACATGATGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp AGGACACCGCTGAAGTATGGACAGTTCCAGACCCACTaGCCACCGAGGCCCCTTGCTTGGCGTGGGTTGCAA +
Preference number: 6 (lower is better)
Translates to: RTPLKYGQFQTH*PPRPLAWRGLQ
Trigger: TTGCAACCCACGCCAAGCAAGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCATACTTCAGCGGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp AGGGAGTGCTCCCGAGCCTTGTTGAGCGAGGTCTCCTaGTCAAACACGCCCTTCACTGGCCCCACCACAGAC +
Preference number: 6 (lower is better)
Translates to: RECSRALLSEVS*SNTPFTGPTTD
Trigger: GTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAACAAGGCTCGGGAGCACTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp CGGCCCAACCCACTGAGGTTGGCTCCAAGGTTGCCTTaGATGATGGGGGCTGTGACCACGCTCTTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: RPNPLRLAPRLP*MMGAVTTLLPF
Trigger: GAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAACCTCAGTGGGTTGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 72 bp CCTGGGACTTGGCCAATGTGGCCATCATGTCCGGAGTaGTTCGCAGAACCGTCTGGCCCTTGGCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: PGTWPMWPSCPE*FAEPSGPWHLW
Trigger: CCACAGATGCCAAGGGCCAGACGGTTCTGCGAATCACTCCGGACATGATGGCCACATTGGCCAAGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp ACTTTGGTCTGTGTGGCAGTGGCTGGAACCCGGATCTaGGGTCCTGCTGGCATCTGTGGCAATGTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: TLVCVAVAGTRI*GPAGICGNVCA
Trigger: GGCACAGACATTGCCACAGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp GTCTGGCCTGCTTTGGGAGGCATCACTCCCAGTCCCTaGACGATGCGGATCGTGGCAGCTGGTTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: VWPALGGITPSP*TMRIVAAGFAS
Trigger: AGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp TTGCTTGGCGTGGGTTGCAACGGTGATGGTCTGGCCTaGTTTGGGAGGCATCACTCCCAGTCCCTGCACGAT +
Preference number: 6 (lower is better)
Translates to: LLGVGCNGDGLA*FGRHHSQSLHD
Trigger: ATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAGGCCAGACCATCACCGTTGCAACCCACGCCAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp GCTCCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTaGTGGGACGCACCACATAGTCAGTTCTTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: APAPEKPVSPPP*WDAPHSQFFRG
Trigger: CCCTCGGAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS CCA 72 bp CCTCCCAGGAGGCAATCCTCCATGATGCGCGTGCCATaGCCATCTCCACACGGACCAAGTTCCAGAGGATCT +
Preference number: 6 (lower is better)
Translates to: PPRRQSSMMRVP*PSPHGPSSRGS
Trigger: AGATCCTCTGGAACTTGGTCCGTGTGGAGATGGCCATGGCACGCGCATCATGGAGGATTGCCTCCTGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000526884.1
ENST00000526940.1
ENST00000529319.5
ENST00000530278.5
ENST00000531318.1
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CCA 72 bp TGGTGTGGTGGGGGTTACAGGTGTGACTGGGGTGGGTaGCATACTGGAGTCACTGAGGCTCATCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: WCGGGYRCDWGG*HTGVTEAHLAL
Trigger: CAGAGCCAGATGAGCCTCAGTGACTCCAGTATGCCACCCACCCCAGTCACACCTGTAACCCCCACCACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp GAGGCATCACTCCCAGTCCCTGCACGATGCGGATCGTaGCAGCTGGTTTTGCTTCTGAAGAGGCCACTGTGC +
Preference number: 6 (lower is better)
Translates to: EASLPVPARCGS*QLVLLLKRPLC
Trigger: GCACAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp ATCATGTCCGGAGTGATTCGCAGAACCGTCTGGCCCTaGGCATCTGTGGTGATGGAAGAGGGCGGCAGACGC +
Preference number: 6 (lower is better)
Translates to: IMSGVIRRTVWP*ASVVMEEGGRR
Trigger: GCGTCTGCCGCCCTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTCTGCGAATCACTCCGGACATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 90 bp CCCGAGCTAGACTTAGCTGGTTCTGAGACTGTGGAAGGGCCGCTTTaGTTCACTGCCGATACAGGTGGAGGGGAGATGGGAATGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PELDLAGSETVEGPL*FTADTGGGEMGMAG
Trigger: GCCCGCCATTCCCATCTCCCCTCCACCTGTATCGGCAGTGAACAAAAGCGGCCCTTCCACAGTCTCAGAACCAGCTAAGTCTAGCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp GCTCCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTaGTGGGACGCACCACATAGTCAGTTCTTACCCGAG +
Preference number: 6 (lower is better)
Translates to: APAPEKPVSPPP*WDAPHSQFLPE
Trigger: CTCGGGTAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp ACGCCCTTCACTGGCCCCACCACAGACTCAAAGCCGTaGATGCGAAAGGTGAACGCCTTATGGGGTTGGCTA +
Preference number: 6 (lower is better)
Translates to: TPFTGPTTDSKP*MRKVNALWGWL
Trigger: TAGCCAACCCCATAAGGCGTTCACCTTTCGCATGCACGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp CTGCTTTGGGAGGCATCACTCCCAGTCCCTGCACGATaGGGATCGTGGCAGCTGGTTTTGCTTCTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LLWEASLPVPAR*GSWQLVLLLKR
Trigger: CCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGCCTCCCAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp CCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTGCTaGGACGCACCACATAGTCAGTTCTTACCCGAGGGA +
Preference number: 6 (lower is better)
Translates to: PAPEKPVSPPPC*DAPHSQFLPEG
Trigger: TCCCTCGGGTAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp GGGGTGGGTGGCATACTGGAGTCACTGAGGCTCATCTaGCTCTGCTCAGAAGGGCCACTGCTAAGGACCTTT +
Preference number: 6 (lower is better)
Translates to: GVGGILESLRLI*LCSEGPLLRTF
Trigger: AAAGGTCCTTAGCAGTGGCCCTTCTGAGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGCCACCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp TGTGGAAGGGCCGCTTTTGTTCACTGCCGATACAGGTaGAGGGGAGATGGGAATGGCGGGCAATGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: CGRAAFVHCRYR*RGDGNGGQCWC
Trigger: ACACCAGCATTGCCCGCCATTCCCATCTCCCCTCCACCTGTATCGGCAGTGAACAAAAGCGGCCCTTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp TTACTGTCTGGGGCACTACTTTGGTCTGTGTGGCAGTaGCTGGAACCCGGATCTGCGGTCCTGCTGGCATCT +
Preference number: 6 (lower is better)
Translates to: LLSGALLWSVWQ*LEPGSAVLLAS
Trigger: AGATGCCAGCAGGACCGCAGATCCGGGTTCCAGCCACTGCCACACAGACCAAAGTAGTGCCCCAGACAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000532147.1
ENST00000682444.1
CDS CCA 72 bp GCAGCATTCATACTGGGTAAGGACACCGCTGAAGTATaGACAGTTCCAGACCCACTGGCCACCGAGGCCCCT +
Preference number: 6 (lower is better)
Translates to: AAFILGKDTAEV*TVPDPLATEAP
Trigger: AGGGGCCTCGGTGGCCAGTGGGTCTGGAACTGTCCATACTTCAGCGGTGTCCTTACCCAGTATGAATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp GATGATGGGGGCTGTGACCACGCTCTTGCCCTTCATTaGCTGGCTGATCACAGAGAGGGGAACTGTGATCCG +
Preference number: 6 (lower is better)
Translates to: DDGGCDHALALH*LADHREGNCDP
Trigger: CGGATCACAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp GAGACTGCTTTGGAGGAGCCAGAAGCTGTTCCCTGTTaGAGATGGGATGCAGGGACAGTCTGGATGCGCACC +
Preference number: 6 (lower is better)
Translates to: ETALEEPEAVPC*RWDAGTVWMRT
Trigger: GGTGCGCATCCAGACTGTCCCTGCATCCCATCTCCAACAGGGAACAGCTTCTGGCTCCTCCAAAGCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp CCTGCTCCTGAAAAACCCGTTTCTCCTCCCCCGTGCTaGGACGCACCACATAGTCAGTTCTTCCGAGGGACA +
Preference number: 6 (lower is better)
Translates to: PAPEKPVSPPPC*DAPHSQFFRGT
Trigger: TGTCCCTCGGAAGAACTGACTATGTGGTGCGTCCCAGCACGGGGGAGGAGAAACGGGTTTTTCAGGAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS CAA 72 bp GGAGACTGCTTTGGAGGAGCCAGAAGCTGTTCCCTGTaGGAGATGGGATGCAGGGACAGTCTGGATGCGCAC +
Preference number: 6 (lower is better)
Translates to: GDCFGGARSCSL*EMGCRDSLDAH
Trigger: GTGCGCATCCAGACTGTCCCTGCATCCCATCTCCAACAGGGAACAGCTTCTGGCTCCTCCAAAGCAGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp CTCCAGCTCCAGTGGTCCCTGCTCCAGGATGAAGGATaGAGATCCACGTGGAAAGAGCCCCACCTACCTGCT +
Preference number: 6 (lower is better)
Translates to: LQLQWSLLQDEG*RSTWKEPHLPA
Trigger: AGCAGGTAGGTGGGGCTCTTTCCACGTGGATCTCAATCCTTCATCCTGGAGCAGGGACCACTGGAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS CAA 90 bp CCCAGTGATTGCCACCTGCTTGATGATGTTCTGTCCTGTGACATTTaGAATGACGGCAGCCGTGGAGGCACTGGGAGCAGAGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: PSDCHLLDDVLSCDI*NDGSRGGTGSRGPR
Trigger: CCTGGGACCTCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTGGCAATCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 90 bp AATGTGGCCATCATGTCCGGAGTGATTCGCAGAACCGTCTGGCCCTaGGCATCTGTGGTGATGGAAGAGGGCGGCAGACGCAATACATCC +
Preference number: 6 (lower is better)
Translates to: NVAIMSGVIRRTVWP*ASVVMEEGGRRNTS
Trigger: GGATGTATTGCGTCTGCCGCCCTCTTCCATCACCACAGATGCCAAGGGCCAGACGGTTCTGCGAATCACTCCGGACATGATGGCCACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp GCATCACTCCCAGTCCCTGCACGATGCGGATCGTGGCAGCTGGTTTaGCTTCTGAAGAGGCCACTGTGCTTTTTCCCTTCTGGTCAGCCA +
Preference number: 6 (lower is better)
Translates to: ASLPVPARCGSWQLV*LLKRPLCFFPSGQP
Trigger: TGGCTGACCAGAAGGGAAAAAGCACAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGGGAGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp AAGAGCCCCACCTACCTGCTTGATGATGTTCTGTCCTGTGACATTTaGAATGACGGCAGCCGTGGAGGCACTGGGAGCAGAGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: KSPTYLLDDVLSCDI*NDGSRGGTGSRGPR
Trigger: CCTGGGACCTCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTAGGTGGGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS TCA 72 bp TCCAGCTCCAGTGGTCCCTGCTCCAGGATGAAGGATTaGGATCCACGTGGAAAGAGCCCCACCTACCTGCTT +
Preference number: 6 (lower is better)
Translates to: SSSSGPCSRMKD*DPRGKSPTYLL
Trigger: AAGCAGGTAGGTGGGGCTCTTTCCACGTGGATCTCAATCCTTCATCCTGGAGCAGGGACCACTGGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS CCA 72 bp GTTGAGCGAGGTCTCCTTGTCAAACACGCCCTTCACTaGCCCCACCACAGACTCAAAGCCGTGCATGCGAAA +
Preference number: 6 (lower is better)
Translates to: VERGLLVKHALH*PHHRLKAVHAK
Trigger: TTTCGCATGCACGGCTTTGAGTCTGTGGTGGGGCCAGTGAAGGGCGTGTTTGACAAGGAGACCTCGCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp ATGGGGGCTGTGACCACGCTCTTGCCCTTCATTGGCTaGCTGATCACAGAGAGGGGAACTGTGATCCGTGTA +
Preference number: 6 (lower is better)
Translates to: MGAVTTLLPFIG*LITERGTVIRV
Trigger: TACACGGATCACAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp GTGTTGCCTCCTGTCCCGAAGAGGTCCTGGGTCAATTaGACTGTGGTAACCTGGGACTTGGCCAATGTGGCC +
Preference number: 6 (lower is better)
Translates to: VLPPVPKRSWVN*TVVTWDLANVA
Trigger: GGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGGGACAGGAGGCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp AGGTTGCCTTTGATGATGGGGGCTGTGACCACGCTCTaGCCCTTCATTGGCTGGCTGATCACAGAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: RLPLMMGAVTTL*PFIGWLITERG
Trigger: TCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp GTCCCGAAGAGGTCCTGGGTCAATTTGACTGTGGTAACCTGGGACTaGGCCAATGTGGCCATCATGTCCGGAGTGATTCGCAGAACCGTC +
Preference number: 6 (lower is better)
Translates to: VPKRSWVNLTVVTWD*ANVAIMSGVIRRTV
Trigger: GACGGTTCTGCGAATCACTCCGGACATGATGGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp GTGGTACCTGTTGGAGTGGATGAAGGGGCACTGGCTGAACTGGCCTaGGCAGGGCTATCAGCTGCATGTACTGGATTGGAAGTGACGTGT +
Preference number: 6 (lower is better)
Translates to: VVPVGVDEGALAELA*AGLSAACTGLEVTC
Trigger: ACACGTCACTTCCAATCCAGTACATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAGTGCCCCTTCATCCACTCCAACAGGTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp TTGGCTCCAAGGTTGCCTTTGATGATGGGGGCTGTGACCACGCTCTaGCCCTTCATTGGCTGGCTGATCACAGAGAGGGGAACTGTGATC +
Preference number: 6 (lower is better)
Translates to: LAPRLPLMMGAVTTL*PFIGWLITERGTVI
Trigger: GATCACAGTTCCCCTCTCTGTGATCAGCCAGCCAATGAAGGGCAAGAGCGTGGTCACAGCCCCCATCATCAAAGGCAACCTTGGAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp GACCAAGTTCCAGAGGATCTGTCAGCATATGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTACTCTGAACCGCGGGCGCCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: DQVPEDLSAYGLRNP*FLLHRYSEPRAPAP
Trigger: GGGGGCCGGCGCCCGCGGTTCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGGAACTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS TCA 72 bp GCCACCTGCTTGATGATGTTCTGTCCTGTGACATTTTaGATGACGGCAGCCGTGGAGGCACTGGGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: ATCLMMFCPVTF*MTAAVEALGAE
Trigger: CTCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 72 bp CTCAGTACTTTGGGAGGTCCAGGCGGGCAGTCCCCTTaGATCCATGAGTTTGAGACCAGCCTAGCGAACATG +
Preference number: 6 (lower is better)
Translates to: LSTLGGPGGQSP*IHEFETSLANM
Trigger: CATGTTCGCTAGGCTGGTCTCAAACTCATGGATTCAAGGGGACTGCCCGCCTGGACCTCCCAAAGTACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524746.5
ENST00000526884.1
ENST00000529319.5
ENST00000532225.5
CDS GCA 72 bp GAGAACCAGCTGTTGAGGGAGCTGGCTGGCGATGACTaGCAATCCAAAACTCGCTCCTCTAGCATAGGAAGG +
Preference number: 6 (lower is better)
Translates to: ENQLLRELAGDD*QSKTRSSSIGR
Trigger: CCTTCCTATGCTAGAGGAGCGAGTTTTGGATTGGCAGTCATCGCCAGCCAGCTCCCTCAACAGCTGGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp CTGGAAGGAACAGCTCGACTTTCTCCAGCAAGATACTaGAGGGCTGGTAGTACCAACTCAGCCCAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: LEGTARLSPARY*RAGSTNSAQLG
Trigger: CCCCAACTGGGCTGAGTTGGTACTACCAGCCCTGCAGTATCTTGCTGGAGAAAGTCGAGCTGTTCCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp GGTGGCATACTGGAGTCACTGAGGCTCATCTGGCTCTaGTCAGAAGGGCCACTGCTAAGGACCTTTATGGAG +
Preference number: 6 (lower is better)
Translates to: GGILESLRLIWL*SEGPLLRTFME
Trigger: CTCCATAAAGGTCCTTAGCAGTGGCCCTTCTGAGCAGAGCCAGATGAGCCTCAGTGACTCCAGTATGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp CCGAAGAGGTCCTGGGTCAATTTGACTGTGGTAACCTaGGACTTGGCCAATGTGGCCATCATGTCCGGAGTG +
Preference number: 6 (lower is better)
Translates to: PKRSWVNLTVVT*DLANVAIMSGV
Trigger: CACTCCGGACATGATGGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp TTGCCTGTAGTGTTGCCTCCTGTCCCGAAGAGGTCCTaGGTCAATTTGACTGTGGTAACCTGGGACTTGGCC +
Preference number: 6 (lower is better)
Translates to: LPVVLPPVPKRS*VNLTVVTWDLA
Trigger: GGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGGGACAGGAGGCAACACTACAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp TTGGAGTGGATGAAGGGGCACTGGCTGAACTGGCCTTaGCAGGGCTATCAGCTGCATGTACTGGATTGGAAG +
Preference number: 6 (lower is better)
Translates to: LEWMKGHWLNWP*QGYQLHVLDWK
Trigger: CTTCCAATCCAGTACATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAGTGCCCCTTCATCCACTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp TACCTGTTGGAGTGGATGAAGGGGCACTGGCTGAACTaGCCTTGGCAGGGCTATCAGCTGCATGTACTGGAT +
Preference number: 6 (lower is better)
Translates to: YLLEWMKGHWLN*PWQGYQLHVLD
Trigger: ATCCAGTACATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAGTGCCCCTTCATCCACTCCAACAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp TCCACAGGTACTCACGCCAGGTGTCAATTTCCTTATTaGAGGAAGGGAAGCTGGACCAGGTCCTCCCTCCCG +
Preference number: 6 (lower is better)
Translates to: STGTHARCQFPY*RKGSWTRSSLP
Trigger: CGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACACCTGGCGTGAGTACCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446488.7
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp GACTTAGCTGGTTCTGAGACTGTGGAAGGGCCGCTTTaGTTCACTGCCGATACAGGTGGAGGGGAGATGGGA +
Preference number: 6 (lower is better)
Translates to: DLAGSETVEGPL*FTADTGGGEMG
Trigger: TCCCATCTCCCCTCCACCTGTATCGGCAGTGAACAAAAGCGGCCCTTCCACAGTCTCAGAACCAGCTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp GTTGGAGTGGATGAAGGGGCACTGGCTGAACTGGCCTaGGCAGGGCTATCAGCTGCATGTACTGGATTGGAA +
Preference number: 6 (lower is better)
Translates to: VGVDEGALAELA*AGLSAACTGLE
Trigger: TTCCAATCCAGTACATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAGTGCCCCTTCATCCACTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp CCAGTCCCTGCACGATGCGGATCGTGGCAGCTGGTTTaGCTTCTGAAGAGGCCACTGTGCTTTTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: PVPARCGSWQLV*LLKRPLCFFPS
Trigger: AGAAGGGAAAAAGCACAGTGGCCTCTTCAGAAGCAAAACCAGCTGCCACGATCCGCATCGTGCAGGGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp CTGGATGCGGAAGTTAGTGGCTGTGAGTGGAATGCTGTTGCCTGTTaGGGGCTTCACACCAAGCTGCCCAGTGATTGCCACCTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: LDAEVSGCEWNAVAC*GLHTKLPSDCHLLD
Trigger: ATCAAGCAGGTGGCAATCACTGGGCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATTCCACTCACAGCCACTAACTTCCGCATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 90 bp TTGCCTGTAGTGTTGCCTCCTGTCCCGAAGAGGTCCTGGGTCAATTaGACTGTGGTAACCTGGGACTTGGCCAATGTGGCCATCATGTCC +
Preference number: 6 (lower is better)
Translates to: LPVVLPPVPKRSWVN*TVVTWDLANVAIMS
Trigger: GGACATGATGGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCTCTTCGGGACAGGAGGCAACACTACAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp CTGGCTGAACTGGCCTTGGCAGGGCTATCAGCTGCATGTACTGGATaGGAAGTGACGTGTAAGGTGGCAGAGATGCCTTTGCCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: LAELALAGLSAACTG*EVTCKVAEMPLPVV
Trigger: CACTACAGGCAAAGGCATCTCTGCCACCTTACACGTCACTTCCAATCCAGTACATGCAGCTGATAGCCCTGCCAAGGCCAGTTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp ATGCTGATGGGGGTGCTTGCAGCCCCAGAAGCCACAGCTACAGTCTaGGACACAGCAGCATTCATACTGGGTAAGGACACCGCTGAAGTA +
Preference number: 6 (lower is better)
Translates to: MLMGVLAAPEATATV*DTAAFILGKDTAEV
Trigger: TACTTCAGCGGTGTCCTTACCCAGTATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGGCTTCTGGGGCTGCAAGCACCCCCATCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 72 bp CAGTTCTACTTTATCTGCAGTTTTCATATCCGTGGTTaGAAGTGTGGGCACCACCCGCAGGGGCACCGCAGG +
Preference number: 6 (lower is better)
Translates to: QFYFICSFHIRG*KCGHHPQGHRR
Trigger: CCTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAACTGCAGATAAAGTAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 72 bp CACCAGAAGAACACCCGAGCTAGACTTAGCTGGTTCTaGGACTGTGGAAGGGCCGCTTTTGTTCACTGCCGA +
Preference number: 6 (lower is better)
Translates to: HQKNTRARLSWF*DCGRAAFVHCR
Trigger: TCGGCAGTGAACAAAAGCGGCCCTTCCACAGTCTCAGAACCAGCTAAGTCTAGCTCGGGTGTTCTTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 72 bp CCTACCTGCTTGATGATGTTCTGTCCTGTGACATTTTaGATGACGGCAGCCGTGGAGGCACTGGGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: PTCLMMFCPVTF*MTAAVEALGAE
Trigger: CTCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS GCA 72 bp GCCATCTCCAGCAGATCACTCCGGGAAGCAAGAATTTaGTTCAGCAGCCGATGGAAATACTGCTGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: AISSRSLREARI*FSSRWKYCCWE
Trigger: CTCCCAGCAGCAGTATTTCCATCGGCTGCTGAAGCAAATTCTTGCTTCCCGGAGTGATCTGCTGGAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS GCA 72 bp AAGAAACTGGGAGTCCTTAAGCAGTTCACAGATCTCTaGCCGTGTGCCTTCTCCATTAGGCAGTCGAGCCGC +
Preference number: 6 (lower is better)
Translates to: KKLGVLKQFTDL*PCAFSIRQSSR
Trigger: GCGGCTCGACTGCCTAATGGAGAAGGCACACGGGCAGAGATCTGTGAACTGCTTAAGGACTCCCAGTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp AGGAGACGGAGCTGTAGTCACAACAACAGTGGAGACTaGTTTGGAGGAGCCAGAAGCTGTTCCCTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: RRRSCSHNNSGD*FGGARSCSLLE
Trigger: CTCCAACAGGGAACAGCTTCTGGCTCCTCCAAAGCAGTCTCCACTGTTGTTGTGACTACAGCTCCGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp AAGTTAGTGGCTGTGAGTGGAATGCTGTTGCCTGTTTaGGGCTTCACACCAAGCTGCCCAGTGATTGCCACC +
Preference number: 6 (lower is better)
Translates to: KLVAVSGMLLPV*GFTPSCPVIAT
Trigger: GGTGGCAATCACTGGGCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATTCCACTCACAGCCACTAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp ATGGAAGAGGGCGGCAGACGCAATACATCCTTACCCTaGATGCGGAAGTTAGTGGCTGTGAGTGGAATGCTG +
Preference number: 6 (lower is better)
Translates to: MEEGGRRNTSLP*MRKLVAVSGML
Trigger: CAGCATTCCACTCACAGCCACTAACTTCCGCATCCAGGGTAAGGATGTATTGCGTCTGCCGCCCTCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp GGCCATCTCCAGCAGATCACTCCGGGAAGCAAGAATTaGCTTCAGCAGCCGATGGAAATACTGCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: GHLQQITPGSKN*LQQPMEILLLG
Trigger: TCCCAGCAGCAGTATTTCCATCGGCTGCTGAAGCAAATTCTTGCTTCCCGGAGTGATCTGCTGGAGATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CAA 72 bp CCAGTTCTACTTTATCTGCAGTTTTCATATCCGTGGTaGAAAGTGTGGGCACCACCCGCAGGGGCACCGCAG +
Preference number: 6 (lower is better)
Translates to: PVLLYLQFSYPW*KVWAPPAGAPQ
Trigger: CTGCGGTGCCCCTGCGGGTGGTGCCCACACTTTCAACCACGGATATGAAAACTGCAGATAAAGTAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp TGCCACCTGCTTGATGATGTTCTGTCCTGTGACATTTaGAATGACGGCAGCCGTGGAGGCACTGGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: CHLLDDVLSCDI*NDGSRGGTGSR
Trigger: TCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp GAAGTTAGTGGCTGTGAGTGGAATGCTGTTGCCTGTTaGGGGCTTCACACCAAGCTGCCCAGTGATTGCCAC +
Preference number: 6 (lower is better)
Translates to: EVSGCEWNAVAC*GLHTKLPSDCH
Trigger: GTGGCAATCACTGGGCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATTCCACTCACAGCCACTAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp AGGTCCTGGGTCAATTTGACTGTGGTAACCTGGGACTaGGCCAATGTGGCCATCATGTCCGGAGTGATTCGC +
Preference number: 6 (lower is better)
Translates to: RSWVNLTVVTWD*ANVAIMSGVIR
Trigger: GCGAATCACTCCGGACATGATGGCCACATTGGCCAAGTCCCAGGTTACCACAGTCAAATTGACCCAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp ACGTGTAAGGTGGCAGAGATGCCTTTGCCTGTAGTGTaGCCTCCTGTCCCGAAGAGGTCCTGGGTCAATTTG +
Preference number: 6 (lower is better)
Translates to: TCKVAEMPLPVV*PPVPKRSWVNL
Trigger: CAAATTGACCCAGGACCTCTTCGGGACAGGAGGCAACACTACAGGCAAAGGCATCTCTGCCACCTTACACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp CTGGCCTTGGCAGGGCTATCAGCTGCATGTACTGGATaGGAAGTGACGTGTAAGGTGGCAGAGATGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LALAGLSAACTG*EVTCKVAEMPL
Trigger: CAAAGGCATCTCTGCCACCTTACACGTCACTTCCAATCCAGTACATGCAGCTGATAGCCCTGCCAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp AAAGCCGAACTTGAGGCTTCTGTTGGCTTGAGGTCAGGAGTCACTTaGACCACAGTGGTACCTGTTGGAGTGGATGAAGGGGCACTGGCT +
Preference number: 6 (lower is better)
Translates to: KAELEASVGLRSGVT*TTVVPVGVDEGALA
Trigger: AGCCAGTGCCCCTTCATCCACTCCAACAGGTACCACTGTGGTCAAAGTGACTCCTGACCTCAAGCCAACAGAAGCCTCAAGTTCGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS TCA 72 bp CACGCCAAGAGCTGGCATCAAGCGAAAAGCCGAACTTaGGGCTTCTGTTGGCTTGAGGTCAGGAGTCACTTT +
Preference number: 6 (lower is better)
Translates to: HAKSWHQAKSRT*GFCWLEVRSHF
Trigger: AAAGTGACTCCTGACCTCAAGCCAACAGAAGCCTCAAGTTCGGCTTTTCGCTTGATGCCAGCTCTTGGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp GGAATGCTGTTGCCTGTTTGGGGCTTCACACCAAGCTaGCCAGTGATTGCCACCTGCTTGATGATGTTCTGT +
Preference number: 6 (lower is better)
Translates to: GMLLPVWGFTPS*PVIATCLMMFC
Trigger: ACAGAACATCATCAAGCAGGTGGCAATCACTGGGCAGCTTGGTGTGAAGCCCCAAACAGGCAACAGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp ACCTCGGGGTTAAAGTGTCCGTCTCGGAAAAGCTTCTaGGCAATGTGCAGAGGGTTTCCAAAGCGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: TSGLKCPSRKSF*AMCRGFPKRKF
Trigger: GAACTTCCGCTTTGGAAACCCTCTGCACATTGCCCAGAAGCTTTTCCGAGACGGACACTTTAACCCCGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CCA 72 bp TTTGCTTCTGAAGAGGCCACTGTGCTTTTTCCCTTCTaGTCAGCCACACTCACGCCAAGAGCTGGCATCAAG +
Preference number: 6 (lower is better)
Translates to: FASEEATVLFPF*SATLTPRAGIK
Trigger: CTTGATGCCAGCTCTTGGCGTGAGTGTGGCTGACCAGAAGGGAAAAAGCACAGTGGCCTCTTCAGAAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp CTTGAGGCTTCTGTTGGCTTGAGGTCAGGAGTCACTTaGACCACAGTGGTACCTGTTGGAGTGGATGAAGGG +
Preference number: 6 (lower is better)
Translates to: LEASVGLRSGVT*TTVVPVGVDEG
Trigger: CCCTTCATCCACTCCAACAGGTACCACTGTGGTCAAAGTGACTCCTGACCTCAAGCCAACAGAAGCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp ACCTACCTGCTTGATGATGTTCTGTCCTGTGACATTTaGAATGACGGCAGCCGTGGAGGCACTGGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: TYLLDDVLSCDI*NDGSRGGTGSR
Trigger: TCTGCTCCCAGTGCCTCCACGGCTGCCGTCATTCAAAATGTCACAGGACAGAACATCATCAAGCAGGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS CAA 90 bp TTGGAAGTGACGTGTAAGGTGGCAGAGATGCCTTTGCCTGTAGTGTaGCCTCCTGTCCCGAAGAGGTCCTGGGTCAATTTGACTGTGGTA +
Preference number: 6 (lower is better)
Translates to: LEVTCKVAEMPLPVV*PPVPKRSWVNLTVV
Trigger: TACCACAGTCAAATTGACCCAGGACCTCTTCGGGACAGGAGGCAACACTACAGGCAAAGGCATCTCTGCCACCTTACACGTCACTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 90 bp GAACATGGCAAAACCCCTTCTCACGCCAGGTGTCAATTTCCTTATTaGAGGAAGGGAAGCTGGACCAGGTCCTCCCTCCCGTTATTTCCA +
Preference number: 6 (lower is better)
Translates to: EHGKTPSHARCQFPY*RKGSWTRSSLPLFP
Trigger: TGGAAATAACGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACACCTGGCGTGAGAAGGGGTTTTGCCATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524746.5
ENST00000526884.1
ENST00000529319.5
ENST00000532225.5
CDS CCA 72 bp CCACAGCTACAGTCTTGGACACAGCAGCATTCATACTaGGTAAGGACACCGCTGAAGTATGGACAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: PQLQSWTQQHSY*VRTPLKYGQFQ
Trigger: CTGGAACTGTCCATACTTCAGCGGTGTCCTTACCCAGTATGAATGCTGCTGTGTCCAAGACTGTAGCTGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CCA 72 bp TCAGAATGCTCCTACAGTAACTCAATCTCAGTACTTTaGGAGGTCCAGGCGGGCAGTCCCCTTGAATCCATG +
Preference number: 6 (lower is better)
Translates to: SECSYSNSISVL*EVQAGSPLESM
Trigger: CATGGATTCAAGGGGACTGCCCGCCTGGACCTCCCAAAGTACTGAGATTGAGTTACTGTAGGAGCATTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526884.1
CDS CAA 72 bp CGCTTGTACTGTGACTTGAAGCATAACTGCCGGTACTaGACCACCTCGGGGTTAAAGTGTCCGTCTCGGAAA +
Preference number: 6 (lower is better)
Translates to: RLYCDLKHNCRY*TTSGLKCPSRK
Trigger: TTTCCGAGACGGACACTTTAACCCCGAGGTGGTCAAGTACCGGCAGTTATGCTTCAAGTCACAGTACAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CAA 72 bp AAAGCCGTGCATGCGAAAGGTGAACGCCTTATGGGGTaGGCTATACCTGTAACGCTCCTGCTCCTGAAAAAC +
Preference number: 6 (lower is better)
Translates to: KAVHAKGERLMG*AIPVTLLLLKN
Trigger: GTTTTTCAGGAGCAGGAGCGTTACAGGTATAGCCAACCCCATAAGGCGTTCACCTTTCGCATGCACGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp CCAGAGGATCTGTCAGCATATGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTACTCTGAACCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: PEDLSAYGLRNP*FLLHRYSEPRA
Trigger: CGCCCGCGGTTCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530278.5
CDS CAA 90 bp TGTTTCTTCTCCACAGGTACTCACGCCAGGTGTCAATTTCCTTATTaGAGGAAGGGAAGCTGGACCAGGTCCTCCCTCCCGTTATTTCCA +
Preference number: 6 (lower is better)
Translates to: CFFSTGTHARCQFPY*RKGSWTRSSLPLFP
Trigger: TGGAAATAACGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACACCTGGCGTGAGTACCTGTGGAGAAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446488.7
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp TCCCCACTGAACAAGGCTAAGATGAGTTCATTCTGCTaGTCAGCACTGTCTTCAGGAAACTGGGGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SPLNKAKMSSFC*SALSSGNWGRN
Trigger: GTTTCTGCCCCAGTTTCCTGAAGACAGTGCTGAGCAGCAGAATGAACTCATCTTAGCCTTGTTCAGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000526940.1
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CCA 72 bp GCCAGGTGTCAATTTCCTTATTTGAGGAAGGGAAGCTaGACCAGGTCCTCCCTCCCGTTATTTCCAATTCTG +
Preference number: 6 (lower is better)
Translates to: ARCQFPYLRKGS*TRSSLPLFPIL
Trigger: CAGAATTGGAAATAACGGGAGGGAGGACCTGGTCCAGCTTCCCTTCCTCAAATAAGGAAATTGACACCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000526884.1
ENST00000529319.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS CCA 72 bp ATTGTTTCTTCTCCACAGGTACTAATCTCAGTACTTTaGGAGGTCCAGGCGGGCAGTCCCCTTGAATCCATG +
Preference number: 6 (lower is better)
Translates to: IVSSPQVLISVL*EVQAGSPLESM
Trigger: CATGGATTCAAGGGGACTGCCCGCCTGGACCTCCCAAAGTACTGAGATTAGTACCTGTGGAGAAGAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524746.5
ENST00000529319.5
CDS TCA 72 bp TCCAAAACTCGCTCCTCTAGCATAGGAAGGCTAGCCTaGCTCTCCAGCAGCAAGATCTCTAATAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: SKTRSSSIGRLA*LSSSKISNRRE
Trigger: CTCTCTTCTATTAGAGATCTTGCTGCTGGAGAGTCAGGCTAGCCTTCCTATGCTAGAGGAGCGAGTTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp CTTGGGTTTTTGCTGAAGAGCTTTTCTGGCTTTAGCTaGAGCTGCTTGTGCTTGGTGAATCCGCTCAAACTC +
Preference number: 6 (lower is better)
Translates to: LGFLLKSFSGFS*SCLCLVNPLKL
Trigger: GAGTTTGAGCGGATTCACCAAGCACAAGCAGCTGCAGCTAAAGCCAGAAAAGCTCTTCAGCAAAAACCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp CACCACATAGTCAGTTCTTCCGAGGGACAGGTGTTGTaGCATCTGAGCTGTCTTCATTTTCTTACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: HHIVSSSEGQVL*HLSCLHFLTEG
Trigger: GCCTTCTGTAAGAAAATGAAGACAGCTCAGATGCCACAACACCTGTCCCTCGGAAGAACTGACTATGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS CAA 72 bp CCAGAGGATCTGTCAGCATATGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTACTCACGCCAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: PEDLSAYGLRNP*FLLHRYSRQVS
Trigger: TGACACCTGGCGTGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446488.7
ENST00000531755.5
ENST00000682444.1
CDS CAA 72 bp GCACCACATAGTCAGTTCTTACCCGAGGGACAGGTGTaGTGGCATCTGAGCTGTCTTCATTTTCTTGCTTAC +
Preference number: 6 (lower is better)
Translates to: APHSQFLPEGQV*WHLSCLHFLAY
Trigger: GTAAGCAAGAAAATGAAGACAGCTCAGATGCCACAACACCTGTCCCTCGGGTAAGAACTGACTATGTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS GCA 72 bp AGCCTAGACAGCAAAGTGTTACACAAAACCGCTCTTTaGTGCCTCAGTATCTCGGAAAAGCTTCTGGGCAAT +
Preference number: 6 (lower is better)
Translates to: SLDSKVLHKTAL*CLSISEKLLGN
Trigger: ATTGCCCAGAAGCTTTTCCGAGATACTGAGGCAGCAAAGAGCGGTTTTGTGTAACACTTTGCTGTCTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526940.1
CDS CCA 72 bp CCACATAGTCAGTTCTTACCCGAGGGACAGGTGTTGTaGCATCTGAGCTGTCTTCATTTTCTTGCTTACAGA +
Preference number: 6 (lower is better)
Translates to: PHSQFLPEGQVL*HLSCLHFLAYR
Trigger: TCTGTAAGCAAGAAAATGAAGACAGCTCAGATGCCACAACACCTGTCCCTCGGGTAAGAACTGACTATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp ACGCACCACATAGTCAGTTCTTCCGAGGGACAGGTGTaGTGGCATCTGAGCTGTCTTCATTTTCTTACAGAA +
Preference number: 6 (lower is better)
Translates to: THHIVSSSEGQV*WHLSCLHFLTE
Trigger: TTCTGTAAGAAAATGAAGACAGCTCAGATGCCACAACACCTGTCCCTCGGAAGAACTGACTATGTGGTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS CAA 90 bp GACCAAGTTCCAGAGGATCTGTCAGCATATGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTACTCACGCCAGGTGTCAATTTCCTTA +
Preference number: 6 (lower is better)
Translates to: DQVPEDLSAYGLRNP*FLLHRYSRQVSISL
Trigger: TAAGGAAATTGACACCTGGCGTGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGGAACTTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000446488.7
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp ACTCACTACTGTATTTACCTGAGTGCTGGTGACATCTaGTGCAAGAAACTGGGAGTCCTTAAGCAGTTCACA +
Preference number: 6 (lower is better)
Translates to: THYCIYLSAGDI*CKKLGVLKQFT
Trigger: TGTGAACTGCTTAAGGACTCCCAGTTTCTTGCACCAGATGTCACCAGCACTCAGGTAAATACAGTAGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS CCA 72 bp GAGCTGTCTTCATTTTCTTACAGAAGGCCTGATCTTTaGTCTCTAGCCATAGCTGGAAGAGGGCAGCTAATT +
Preference number: 6 (lower is better)
Translates to: ELSSFSYRRPDL*SLAIAGRGQLI
Trigger: AATTAGCTGCCCTCTTCCAGCTATGGCTAGAGACCAAAGATCAGGCCTTCTGTAAGAAAATGAAGACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531755.5
CDS TCA 72 bp GAGAATCACTTAACACTTCCTGCCATGTTGAGAGGCTaGCAACATCAAAGAAGATCTCAGGATCCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: ENHLTLPAMLRG*QHQRRSQDPPE
Trigger: TTCTGGAGGATCCTGAGATCTTCTTTGATGTTGTCAGCCTCTCAACATGGCAGGAAGTGTTAAGTGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000526884.1
ENST00000526940.1
ENST00000529319.5
ENST00000530278.5
ENST00000531755.5
ENST00000532225.5
ENST00000682444.1
CDS GCA 72 bp CAGAAGAAATCTCTTCAGCATCTATCAAAGCTGCACTaGCTTTGCCTTTGGTGGGAACTCACACCTAAGTAT +
Preference number: 6 (lower is better)
Translates to: QKKSLQHLSKLH*LCLWWELTPKY
Trigger: ATACTTAGGTGTGAGTTCCCACCAAAGGCAAAGGCAGTGCAGCTTTGATAGATGCTGAAGAGATTTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532147.1
CDS CCA 72 bp TGTCTTCATTTTCTTGCTTACAGAAGGCCTGATCTTTaGTCTCTAGCCATAGCTGGAAGAGGGCAGCTAATT +
Preference number: 6 (lower is better)
Translates to: CLHFLAYRRPDL*SLAIAGRGQLI
Trigger: AATTAGCTGCCCTCTTCCAGCTATGGCTAGAGACCAAAGATCAGGCCTTCTGTAAGCAAGAAAATGAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000682444.1
CDS CAA 72 bp TCTTCTCCACAGGTACTCTGGACAAAGACATGCATCTaGAGACAGAAAGGCAGAAATTCCAGGGATCTAGTT +
Preference number: 6 (lower is better)
Translates to: SSPQVLWTKTCI*RQKGRNSRDLV
Trigger: AACTAGATCCCTGGAATTTCTGCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAGTACCTGTGGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS CAA 72 bp CCAGAGGATCTGTCAGCATATGGTCTAAGGAATCCATaGTTTCTTCTCCACAGGTACTCTGGACAAAGACAT +
Preference number: 6 (lower is better)
Translates to: PEDLSAYGLRNP*FLLHRYSGQRH
Trigger: ATGTCTTTGTCCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGACCATATGCTGACAGATCCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS CAA 90 bp TCCATTGTTTCTTCTCCACAGGTACTCTGGACAAAGACATGCATCTaGAGACAGAAAGGCAGAAATTCCAGGGATCTAGTTGATGCTAAC +
Preference number: 6 (lower is better)
Translates to: SIVSSPQVLWTKTCI*RQKGRNSRDLVDAN
Trigger: GTTAGCATCAACTAGATCCCTGGAATTTCTGCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAGTACCTGTGGAGAAGAAACAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS TCA 72 bp ATTGGCCAAGCAACTTCCACTGCTGGGTTTTCTCTTTaGATTCAACAAATGGAGAGAAACTGGAAGGAACAG +
Preference number: 6 (lower is better)
Translates to: IGQATSTAGFSL*IQQMERNWKEQ
Trigger: CTGTTCCTTCCAGTTTCTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS GCA 72 bp ATTGTTTCTTCTCCACAGGTACTCTGGACAAAGACATaGATCTTGAGACAGAAAGGCAGAAATTCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: IVSSPQVLWTKT*ILRQKGRNSRD
Trigger: ATCCCTGGAATTTCTGCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAGTACCTGTGGAGAAGAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS CCA 72 bp TCTAAGGAATCCATTGTTTCTTCTCCACAGGTACTCTaGACAAAGACATGCATCTTGAGACAGAAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SKESIVSSPQVL*TKTCILRQKGR
Trigger: TCTGCCTTTCTGTCTCAAGATGCATGTCTTTGTCCAGAGTACCTGTGGAGAAGAAACAATGGATTCCTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524794.5
CDS GCA 72 bp TTTTCATTATCTTGGGATTGGCCAAGCAACTTCCACTaGTGGGTTTTCTCTTTGAATTCAACAAATGGAGAG +
Preference number: 6 (lower is better)
Translates to: FSLSWDWPSNFH*WVFSLNSTNGE
Trigger: CTCTCCATTTGTTGAATTCAAAGAGAAAACCCAGCAGTGGAAGTTGCTTGGCCAATCCCAAGATAATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446488.7
ENST00000524746.5
ENST00000524794.5
ENST00000531755.5
ENST00000682444.1
CDS TCA 72 bp GTCTATTCTAAATCCAGAAACTCGACTACTGAATGCTaGATTAAACGGAATGAAACAGAAGAAATCTCTTCA +
Preference number: 6 (lower is better)
Translates to: VYSKSRNSTTEC*IKRNETEEISS
Trigger: TGAAGAGATTTCTTCTGTTTCATTCCGTTTAATTCAGCATTCAGTAGTCGAGTTTCTGGATTTAGAATAGAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532147.1