RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFKB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000109320

Ensembl transcript IDs: ENST00000226574.9, ENST00000394820.8, ENST00000502367.1, ENST00000505458.5, ENST00000507079.5, ENST00000508584.1, ENST00000509165.1, ENST00000510638.1, ENST00000511926.5, ENST00000513803.5, ENST00000600343.5, ENST00000652569.1, ENST00000652619.1

Found 910 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTCCACAGCCAGGTGCAGTGCTGTGCGCCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCAGCGGCCACCAGCAGCAGCAAACAT +
Preference number: 1 (lower is better)
Translates to: CSTARCSAVRPDFCS*ALTSAPAATSSSKH
Trigger: ATGTTTGCTGCTGCTGGTGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGTGCTGTGCGCCCGGACTTCTGCTCC +
Preference number: 1 (lower is better)
Translates to: ASPSRSRQPANEMLS*STARCSAVRPDFCS
Trigger: GGAGCAGAAGTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 90 bp GCCTTGTGGAGGCAGGCGAGAGAGGCAGCGAGTGGGCCTGAGAGGTaGTCTTCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTT +
Preference number: 1 (lower is better)
Translates to: ALWRQAREAASGPER*SSLGWRLPGSLQLL
Trigger: AAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCCTCTCTCGCCTGCCTCCACAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp CGTCAGCCCCAGCGGCCACCAGCAGCAGCAAACATGGCAGGCTATTaGTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGG +
Preference number: 1 (lower is better)
Translates to: RQPQRPPAAANMAGY*SSWLDEWHSDRPRW
Trigger: CCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTGGTGGCCGCTGGGGCTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp AGGCAGCGAGTGGGCCTGAGAGGTGGTCTTCACTGGGCTGGAGGCTaGCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAG +
Preference number: 1 (lower is better)
Translates to: RQRVGLRGGLHWAGG*LDHFNCFGVAHLSQ
Trigger: CTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp GAAATCCATAGTGTGGGAAGCTATACCCTGGACCTGTACTTCCAGTaGCCCCTCCTCCACCGCCACTACCAAACATGCCTCCGCCTCCAG +
Preference number: 1 (lower is better)
Translates to: EIHSVGSYTLDLYFQ*PLLHRHYQTCLRLQ
Trigger: CTGGAGGCGGAGGCATGTTTGGTAGTGGCGGTGGAGGAGGGGGCACTGGAAGTACAGGTCCAGGGTATAGCTTCCCACACTATGGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR CCA 90 bp AAGTGTAAGACACTGTCCCCATTCTCATCCTGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGCATCTTCACGTCTCCTGTCACCGCG +
Preference number: 1 (lower is better)
Translates to: KCKTLSPFSSCTAVR*RWTASSIFTSPVTA
Trigger: CGCGGTGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGACAGTGTCTTACACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp TGCTGCTTTGAGAAGAGCTGCCAGCCTGGTGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGTTCCATCGTAGGTAGTACTGTCCAC +
Preference number: 1 (lower is better)
Translates to: CCFEKSCQPGGPSPS*YMQGCGSIVGSTVH
Trigger: GTGGACAGTACTACCTACGATGGAACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp AGAGGTGGTCTTCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTGTCTCAGGGCCTCCACCAGCTCTCT +
Preference number: 1 (lower is better)
Translates to: RGGLHWAGGCLDHFN*FGVAHLSQGLHQLS
Trigger: AGAGAGCTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 90 bp TTGCTAAGTGTAAGACACTGTCCCCATTCTCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCAGCAGCATCTTCACGTCTCCTGTCA +
Preference number: 1 (lower is better)
Translates to: LLSVRHCPHSHPAQQ*DGAGRPAASSRLLS
Trigger: TGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGACAGTGTCTTACACTTAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 90 bp GAACTCCAGCACTCTCTTCTTTTGTTCCTGTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGGTGGCCTCGCTGGGCTCCTGATCTT +
Preference number: 1 (lower is better)
Translates to: ELQHSLLLFLLHTLE*PHHSQRWPRWAPDL
Trigger: AAGATCAGGAGCCCAGCGAGGCCACCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR CCA 90 bp GCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGG +
Preference number: 1 (lower is better)
Translates to: AGSLSTFGCTSASVL*TTQWNFRALVYTVW
Trigger: CCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR CCA 90 bp AATCCCACCATAAGTAGGAAATCCATAGTGTGGGAAGCTATACCCTaGACCTGTACTTCCAGTGCCCCCTCCTCCACCGCCACTACCAAA +
Preference number: 1 (lower is better)
Translates to: NPTISRKSIVWEAIP*TCTSSAPSSTATTK
Trigger: TTTGGTAGTGGCGGTGGAGGAGGGGGCACTGGAAGTACAGGTCCAGGGTATAGCTTCCCACACTATGGATTTCCTACTTATGGTGGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR CCA 90 bp TCCAGGATGGAAAGTAATCCCACCATAAGTAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACCTGTACTTCCAGTGCCCCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SRMESNPTISRKSIV*EAIPWTCTSSAPSS
Trigger: GGAGGAGGGGGCACTGGAAGTACAGGTCCAGGGTATAGCTTCCCACACTATGGATTTCCTACTTATGGTGGGATTACTTTCCATCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR CCA 90 bp GTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTaGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTT +
Preference number: 1 (lower is better)
Translates to: VKSRMIQAGRLSEHL*MHFSFCLVDNAVEF
Trigger: AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp AGTAAGATACTGAGAACTTTATCATGTCCTTCTTTGGCAGCTAGGTaGAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCC +
Preference number: 1 (lower is better)
Translates to: SKILRTLSCPSLAAR*KTELPKRSRRLRSA
Trigger: GGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAAAGTTCTCAGTATCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 90 bp AGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTCAGC +
Preference number: 1 (lower is better)
Translates to: STFGCTSASVLWTTQ*NFRALVYTVWEIVS
Trigger: GCTGACAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp GGACTCAGCCGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTTTTGTCTGGATCAGGAATTTCTAGT +
Preference number: 1 (lower is better)
Translates to: GLSRKALLSIPRPNF*ARVAQFLSGSGISS
Trigger: ACTAGAAATTCCTGATCCAGACAAAAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 90 bp GCCCAGTTTTTGTCTGGATCAGGAATTTCTAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCCAGCTGTTTCATGTCTCCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: AQFLSGSGISSNLYS*SFTSSASCFMSPCA
Trigger: AGCACAAGGAGACATGAAACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTGATCCAGACAAAAACTGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 90 bp CACTTCTTCTTTATCTTTGATTTCAGGATAGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTCAGATTTCCTCCGAAGCTGGACAAA +
Preference number: 1 (lower is better)
Translates to: HFFFIFDFRIVEERF*FTSFQVRFPPKLDK
Trigger: TTTGTCCAGCTTCGGAGGAAATCTGACTTGGAAACTAGTGAACCAAAACCTTTCCTCTACTATCCTGAAATCAAAGATAAAGAAGAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp GAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 2 (lower is better)
Translates to: EGCLHAAVADTVTVSELVCSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...GACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp ACATGGGCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCGCCCGGACTTC +
Preference number: 2 (lower is better)
Translates to: TWASPSRSRQPANEM*SCSTARCSAVRPDF
Trigger: GAAGTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGCCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp CTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTGTCTGCTCCTGAGCATTaGCGTCAGCCCCAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: LHAAVADTVTVSELVYLLSAPEH*RQPQRP
Trigger: TGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGA...CAGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp GCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACGTCTCCTGTCACCGCGCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: AVRWRWTASSIFTSPVTALHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...CGCGGTGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp AGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 2 (lower is better)
Translates to: RVTQAVQKAQVGPSPQQIAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...GATTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GSLPMRCCRAPQPGAVLCPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...GCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp AAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: KTELPKRSRRLRSAPALSPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...GCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp ATTCTCATCCTGCACAGCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACGGCGGGCCGGCTCTCTaGGCACCTTTGGATGCACTT +
Preference number: 2 (lower is better)
Translates to: ILILHSSEMALDGQQHLHGGPAL*APLDAL
Trigger: AAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCC...GTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp GGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: GAKQSYPSGPEGSGRPQPELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...GGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCATGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSCTAVR*RWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCA...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp GCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAGCTCTCTGACTGTACCCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: AGGCLDHFNCFGVAH*SQGLHQLSDCTPRD
Trigger: GTCTCTGGGGGTACAGTCAGAGAGCTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp GAGAGGTGGTCTTCACTGGGCTGGAGGCTGCCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTTGTCTCAGGGCCTCCACCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: ERWSSLGWRLPGSLQ*LRCSPFVSGPPPAL
Trigger: GAGAGCTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 2 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp GGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAGGGCCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 2 (lower is better)
Translates to: GGCLDHFNCFGVAHLSQGPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...GCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp CAAACATGCCTCCGCCTCCAGCTCCAGCACCACTACCACCGCCGAAACTATCCGCTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 2 (lower is better)
Translates to: QTCLRLQLQHHYHRRNYPLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...CGGATAGTTTCGGCGGTGGTAGTGGTGCTGGAGCTGGAGGCGGAGGCATGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAACTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 2 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 2 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWCSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp GTTAGCAGTGAGGCACCACTGGTCAGAGACTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACTG +
Preference number: 2 (lower is better)
Translates to: VSSEAPLVRDSVKLS*RKDVSTPLSQTLSL
Trigger: CAGTGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGAGTCTCTGACCAGTGGTGCCTCACTGCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp AGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 2 (lower is better)
Translates to: RVTQAVQKAQVGPSPQQILIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...GATTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 2 (lower is better)
Translates to: GQKECQVATVIPLMTIGTGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCCTTCATTCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 2 (lower is better)
Translates to: PASWWPYLEAWFQAQLLHSDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...ATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTCACCATTCCCAACGGTaGCCTCGCTGGGCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFHHSQR*PRWAPD
Trigger: ATCAGGAGCCCAGCGAGGCCACCGTTGGGAATGGTG...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAATCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 2 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQSTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CAAACATGCCTCCGCCTCCAGCTCCAGCACCACTACCACCGCCGAAACTATCCGAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 2 (lower is better)
Translates to: QTCLRLQLQHHYHRRNYPSRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...CGGATAGTTTCGGCGGTGGTAGTGGTGCTGGAGCTGGAGGCGGAGGCATGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR CCA 90 bp CTGTCTCGGAGCTCGTCTATTTGCTGCCTTGTGGAGGCAGGCGAGAGAGGCAGCCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 2 (lower is better)
Translates to: LSRSSSICCLVEAGERGSQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...GCTGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp AAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCCACCACATCTTCCTGCTTCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 2 (lower is better)
Translates to: KAQVGPSPQQILHHIFLLPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...AAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTGCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 2 (lower is better)
Translates to: LHAAVADTVTVSELVYLLPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...CAGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTGTAGTACTGTCCACATaGGCATCACCCTCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: SNTCQLVAISRGVVPGTTVVLST*ASPSRS
Trigger: GCTCCTGGAGGGTGATGCCCATGTGGACAGTACTAC...AGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTG +
Preference number: 2 (lower is better)
Translates to: RAGSLSTFGCTSASV*WTTQWNFRALVYTV
Trigger: CACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp AAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCCACCACATCTTCCTGCTTGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 2 (lower is better)
Translates to: KAQVGPSPQQILHHIFLLAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...AAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp GGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAGGGCCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 2 (lower is better)
Translates to: GGCLDHFNCFGVAHLSQGLIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...GCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp AAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCCACCACATCTTCCTGCTTAAAAGGGCATTGGCATaGCTCTTTGCAAGCTGCATA +
Preference number: 2 (lower is better)
Translates to: KAQVGPSPQQILHHIFLLKRALA*LFASCI
Trigger: TATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTT...AAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TGGGCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCAACATGGCAGGCTATTaGTCATCATGGCTAGATGAA +
Preference number: 2 (lower is better)
Translates to: WASPSRSRQPANEMLSCSNMAGY*SSWLDE
Trigger: TTCATCTAGCCATGATGAGCAATAGCCTGCCATGTT...GGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: GQKECQVATVIPLMTIGTLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp AAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCCACCACATCTTCCTGCTTTATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 2 (lower is better)
Translates to: KAQVGPSPQQILHHIFLLYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...AAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp GGCTATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GYCSSWLDEWHSDRPRWGPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...ACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAENLIPR*IRSASV
Trigger: AACACTGGCTGAGCGGATGCATCTGGGGATGAGGTT...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GCATCTTCACGTCTCCTGTCACCGCGTAGTCGAAAAGGGCATTGGCATGCCTCTTGCAAAATGATGCTGTaGTCAGAAGGAATGCCAGGT +
Preference number: 2 (lower is better)
Translates to: ASSRLLSPRSRKGHWHASCKMML*SEGMPG
Trigger: ACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA...AGAGGCATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 2 (lower is better)
Translates to: GQKECQVATVIPLMTIGTQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCTGCCAGCTGGTGGCCTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 2 (lower is better)
Translates to: SGSYGFPFNMSNTCQLVACFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...GGCCACCAGCTGGCAGGTATTTGACATATTAAATGGGAAACCATATGAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCATATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 2 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCAGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 2 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 2 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCAAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 2 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATTTGGGCATGAGCTTCTaGCGTTTCCTCTGCACTTCT +
Preference number: 2 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNLGMSF*RFLCTS
Trigger: AGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAA...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: GQKECQVATVIPLMTIGTLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTGCAAAATGATGCTGTaGTCAGAAGGAATGCCAGGT +
Preference number: 2 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWCKMML*SEGMPG
Trigger: ACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCAAGTGCAAGGGCGTCTaGTACAGATCATTTCTCATG +
Preference number: 2 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGKCKGV*YRSFLM
Trigger: CATGAGAAATGATCTGTACCAGACGCCCTTGCACTT...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 2 (lower is better)
Translates to: GQKECQVATVIPLMTIGTQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTTGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 2 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGCAACGGTGGCCTCGCTaGGCTCCTGATCTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQQRWPR*APDLAL
Trigger: CAGAGCAAGATCAGGAGCCCAGCGAGGCCACCGTTG...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR TCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 2 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 2 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWSASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CAGGAATTTCTAGTAACTTATACAGCTGCAGCTTCACATCTTCAGCCAGCTGTTATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 2 (lower is better)
Translates to: QEFLVTYTAAASHLQPAVIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...AACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAEGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 2 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCGCCTCGCTGGGCTCCTaGTCTTGCTCTGTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTASLGS*SCSVVS
Trigger: TGAAACCACAGAGCAAGATCAGGAGCCCAGCGAGGC...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQALSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp TTTTTGTGCTTGAGTAAGATACTGAGAACTTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: FLCLSKILRTLSCPS*AARCKTELPKRSRR
Trigger: CCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAAAGTTCTCAGTATCTTACTCAAGCACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCTCCTTGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCACTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 2 (lower is better)
Translates to: SPCASKSSDVNSGSYGFPLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...TGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACAAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp CAGGAATTTCTAGTAACTTATACAGCTGCAGCTTCACATCTTCAGCCAGCTGTTTGCCTCTTTGCAAGCTaGATAGCCTTCTCTAGAAAG +
Preference number: 2 (lower is better)
Translates to: QEFLVTYTAAASHLQPAVCLFAS*IAFSRK
Trigger: CTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCA...AACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCTGCCAGCTGGTGGCCAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 2 (lower is better)
Translates to: SGSYGFPFNMSNTCQLVASAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...GGCCACCAGCTGGCAGGTATTTGACATATTAAATGGGAAACCATATGAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 2 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR TCA 90 bp TCTCCTTGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCAAGAAAGAGGTTATCCTaGACTCCAGCACTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: SPCASKSSDVNSGSYGFPRKRLS*TPALSS
Trigger: AGAAGAGAGTGCTGGAGTTCAGGATAACCTCTTTCT...TGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACAAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp CAGGAATTTCTAGTAACTTATACAGCTGCAGCTTCACATCTTCAGCCAGCTGTTAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 2 (lower is better)
Translates to: QEFLVTYTAAASHLQPAVSAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...AACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTNEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 2 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQSASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR GCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 90 bp TCAATAACTTTCCCAAAGAGGTTTACAGTGTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCCTTTTTAGATTCAGTGTCCATGGTT +
Preference number: 2 (lower is better)
Translates to: SITFPKRFTVFLSSL*SQPSGSFLDSVSMV
Trigger: AACCATGGACACTGAATCTAAAAAGGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAACACTGTAAACCTCTTTGGGAAAGTTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR GCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCAACATGGCAGGCTATTaGTCATCATGGCTAGATGAA +
Preference number: 2 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTNMAGY*SSWLDE
Trigger: TTCATCTAGCCATGATGAGCAATAGCCTGCCATGTT...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 72 bp TCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGTGCTGTGCGCCCGGAC +
Preference number: 3 (lower is better)
Translates to: SRSRQPANEMLS*STARCSAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 72 bp ATGGGCATCACCCTCCAGGAGCAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: MGITLQEQAACQ*DVVVLHSQVQC
Trigger: GCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp TGTCACTGTCTCGGAGCTCGTCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCAGCGAGTGGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: CHCLGARLFAAL*RQAREAASGPE
Trigger: CTCAGGCCCACTCGCTGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGAGACAGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp TCCCCATTCTCATCCTGCACAGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTCACGTCTCCTGTCACC +
Preference number: 3 (lower is better)
Translates to: SPFSSCTAVRWR*TASSIFTSPVT
Trigger: GGTGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp GCAGCGAGTGGGCCTGAGAGGTGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGT +
Preference number: 3 (lower is better)
Translates to: AASGPERWSSLG*RLPGSLQLLRC
Trigger: ACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp ACACTGTCCCCATTCTCATCCTGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGCATCTTCACGTCTCCT +
Preference number: 3 (lower is better)
Translates to: TLSPFSSCTAVR*RWTASSIFTSP
Trigger: AGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACGTCTATTTGCTGCCTaGTGGAGGCAGGCGAGAGAG +
Preference number: 3 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSRLFAA*WRQARE
Trigger: CTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACG...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 72 bp GTAAGACACTGTCCCCATTCTCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCAGCAGCATCTTCACGT +
Preference number: 3 (lower is better)
Translates to: VRHCPHSHPAQQ*DGAGRPAASSR
Trigger: ACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGACAGTGTCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 72 bp CTTCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTGTCTCAGGGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: LHWAGGCLDHFN*FGVAHLSQGLH
Trigger: GTGGAGGCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACGTCTCCTGTCACCGCGAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 3 (lower is better)
Translates to: AVRWRWTASSIFTSPVTASSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...CGCGGTGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 3 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR GCA 72 bp ATTGCTAAGTGTAAGACACTGTCCCCATTCTCATCCTaGACAGCAGTGAGATGGCGCTGGACGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: IAKCKTLSPFSS*TAVRWRWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAATGGGGACAGTGTCTTACACTTAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACACCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTT +
Preference number: 3 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTPGSLQ*LRCSPF
Trigger: AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGG...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 72 bp CAGCGGCCACCAGCAGCAGCAAACATGGCAGGCTATTaGTCATCATGGCTAGATGAATGGCATTCAGACCGT +
Preference number: 3 (lower is better)
Translates to: QRPPAAANMAGY*SSWLDEWHSDR
Trigger: ACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTGGTGGCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp AGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTaGATGCACTTCAGCTTCTGTCTTGTGGACAACGCA +
Preference number: 3 (lower is better)
Translates to: RMIQAGRLSEHL*MHFSFCLVDNA
Trigger: TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR TCA 72 bp AGCAAACATGGCAGGCTATTGCTCATCATGGCTAGATaGATGGCATTCAGACCGTCCCCGTTGGGGTGGTCA +
Preference number: 3 (lower is better)
Translates to: SKHGRLLLIMAR*MAFRPSPLGWS
Trigger: TGACCACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCCTGCCATGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 72 bp CACTCTCTTCTTTTGTTCCTGTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGGTGGCCTCGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: HSLLLFLLHTLE*PHHSQRWPRWA
Trigger: AGCCCAGCGAGGCCACCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAACAGGAACAAAAGAAGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR CAA 90 bp CTCAGCCGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTGCGCCAGAGTACCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 3 (lower is better)
Translates to: LSRKALLSIPRPNFCARVPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...TACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCATTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 3 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSLSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp TCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTAGAGTAGCCCAGTTTTaGTCTGGATCAGGAATTTCT +
Preference number: 3 (lower is better)
Translates to: SPRRCRRHCHCLGARLFARVAQF*SGSGIS
Trigger: AGAAATTCCTGATCCAGACAAAAACTGGGCTACTCT...AGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTTTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 3 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFLSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 72 bp GAGGTCCTTCCTGCCCATAATCATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCACCACTGGTCAGAGACT +
Preference number: 3 (lower is better)
Translates to: EVLPAHNHGAFC*ELAVRHHWSET
Trigger: AGTCTCTGACCAGTGGTGCCTCACTGCTAACTCTCAACAAAATGCCCCATGATTATGGGCAGGAAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: SNLIPRCIRSASVVIARYTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAGGGCAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 3 (lower is better)
Translates to: GGCLDHFNCFGVAHLSQGSSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...GCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 72 bp AGCTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTTGTGATTGCTAGATAC +
Preference number: 3 (lower is better)
Translates to: SWQSLVSNLIPR*IRSASVVIARY
Trigger: GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GGCTCATATGGTTTCCCATTTAATATGTCAAATACCTGCCAGCTGGTGGCCATATTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 3 (lower is better)
Translates to: GSYGFPFNMSNTCQLVAIFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...TATGGCCACCAGCTGGCAGGTATTTGACATATTAAATGGGAAACCATATGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp GGCTATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GYCSSWLDEWHSDRPRWGEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...ACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR GCA 72 bp CAAATCCTCCACCACATCTTCCTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTGGTACAGATCATTTCT +
Preference number: 3 (lower is better)
Translates to: QILHHIFLLSDH*QVQGRLVQIIS
Trigger: AGAAATGATCTGTACCAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGAGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp GGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: GCTSASVLWTTQ*NFRALVYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp CAGGAATTTCTAGTAACTTATACAGCTGCAGCTTCACATCTTCAGCCAGCTGTTTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 3 (lower is better)
Translates to: QEFLVTYTAAASHLQPAVFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...AACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQSELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR GCA 72 bp CGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTTTTGTCTGGATCAGGA +
Preference number: 3 (lower is better)
Translates to: RKALLSIPRPNF*ARVAQFLSGSG
Trigger: TCCTGATCCAGACAAAAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp CTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTTAGGGCTTTGGTTTAC +
Preference number: 3 (lower is better)
Translates to: LSTFGCTSASVL*TTQWNFRALVY
Trigger: GTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp GAAAGTAATCCCACCATAAGTAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACCTGTACTTCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: ESNPTISRKSIV*EAIPWTCTSSA
Trigger: GGCACTGGAAGTACAGGTCCAGGGTATAGCTTCCCACACTATGGATTTCCTACTTATGGTGGGATTACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR GCA 72 bp CCGTTGGGGTGGTCAAGAAGTAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGAACTTTATCATGTCCT +
Preference number: 3 (lower is better)
Translates to: PLGWSRSSAAFL*LSKILRTLSCP
Trigger: AGGACATGATAAAGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACTACTTCTTGACCACCCCAACGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR TCA 72 bp CTAGTAGATCCCTCACAAGTTGAGAATGAAGGTGGATaGTTGCTAAGTGTAAGACACTGTCCCCATTCTCAT +
Preference number: 3 (lower is better)
Translates to: LVDPSQVENEGG*LLSVRHCPHSH
Trigger: ATGAGAATGGGGACAGTGTCTTACACTTAGCAATCATCCACCTTCATTCTCAACTTGTGAGGGATCTACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp GGTTCACTAGTTTCCAAGTCAGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGTTTTGTAATATTAATA +
Preference number: 3 (lower is better)
Translates to: GSLVSKSDFLRS*TNTEAGFVILI
Trigger: TATTAATATTACAAAACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATCTGACTTGGAAACTAGTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
3UTR-3UTR CAA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 3 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR-3UTR CAA 90 bp TGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 3 (lower is better)
Translates to: CASKSSDVNSGSYGFPFNAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...ATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CCA 72 bp TTTATCTTTGATTTCAGGATAGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTCAGATTTCCTCCGAAG +
Preference number: 3 (lower is better)
Translates to: FIFDFRIVEERF*FTSFQVRFPPK
Trigger: CTTCGGAGGAAATCTGACTTGGAAACTAGTGAACCAAAACCTTTCCTCTACTATCCTGAAATCAAAGATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGTGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVCSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCCGCGTTCGGCCTCCTaGCGCGGGTGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLPRSAS*RGWALP
Trigger: AGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCCAACGGTGGCCTCGCTaGGCTCCTGATCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAKQSYPSGPEGSGRPQPQRWPR*APDLAL
Trigger: CAGAGCAAGATCAGGAGCCCAGCGAGGCCACCGTTG...GGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGGGCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCTGTGTTCCTTCCGGGTaGCGAGTCCGCGTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: WASPSRSRQPANEMLSCSCVPSG*RVRVRP
Trigger: AGGCCGAACGCGGACTCGCCACCCGGAAGGAACACA...GGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652619.1
3UTR CAA 72 bp TCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SPSRSRQPANEM*SCSTARCSAVR
Trigger: GCGCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACACATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 4 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACATCCCGATCTCCCAGCTaGCGGTCCCCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTSRSPS*RSPPPS
Trigger: AGAAGGTGGAGGGGACCGGCAGCTGGGAGATCGGGA...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GAKQSYPSGPEGSGRPQPSISLV*CRAAWR
Trigger: CCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGA...GGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCCGCCACTACCAAACATaGCTCCGCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSLPMRCCRAPQPGAVLCRHYQT*LRLQLQ
Trigger: CTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCG...GCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACATGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTCSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCCACCATTCCCAACGGTaGCCTCGCTGGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: KTELPKRSRRLRSAPALSHHSQR*PRWAPD
Trigger: ATCAGGAGCCCAGCGAGGCCACCGTTGGGAATGGTG...GCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACATGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTCTAVR*RWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCA...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACACCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACGTCTCCTGTCACCGCGGTCCCCTCCACCTTCTaGTTGCAAATAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: AVRWRWTASSIFTSPVTAVPSTF*LQIGKV
Trigger: GACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGAC...CGCGGTGACAGGAGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTTCCCGATCTCCCAGCTaGCGGTCCCCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SPRRCRRHCHCLGARLFASRSPS*RSPPPS
Trigger: AGAAGGTGGAGGGGACCGGCAGCTGGGAGATCGGGA...AGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTCGCGGGCCTGCCGGCTaGAGAAGGAAGAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFRGPAG*RRKRRR
Trigger: CCGCCGCCTCTTCCTTCTCCAGCCGGCAGGCCCGCG...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGCACAGCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACGTTCCAGGCGCCTTGTaGAGCTGCCAGTGCTATCCG +
Preference number: 4 (lower is better)
Translates to: ILILHSSEMALDGQQHLHVPGAL*SCQCYP
Trigger: CGGATAGCACTGGCAGCTTCACAAGGCGCCTGGAAC...GTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGCAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVQAACQ*DVVVLH
Trigger: GTGGAGCACGACAACATCTCATTGGCAGGCTGCCTG...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQCSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGCGGAGCTCGTCTATTTaGTGCCTTGTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVRSSSI*CLVEAG
Trigger: GCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCG...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGCGCGGGCCTGCCGGCTaGAGAAGGAAGAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRRGPAG*RRKRRR
Trigger: CCGCCGCCTCTTCCTTCTCCAGCCGGCAGGCCCGCG...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATCCGCGTTCGGCCTCCTaGCGCGGGTGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNPRSAS*RGWALP
Trigger: AGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGG...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000652619.1
CDS-3UTR CCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAACGACCACCATGTCCTTaGGTCCAGCAGTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQRPPCP*VQQLQC
Trigger: GCACTGTAACTGCTGGACCCAAGGACATGGTGGTCG...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACACAACGGTGGCCTCGCTaGGCTCCTGATCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTQRWPR*APDLAL
Trigger: CAGAGCAAGATCAGGAGCCCAGCGAGGCCACCGTTG...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCTCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: GSLPMRCCRAPQPGAVLCSDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...GCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCTCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: KTELPKRSRRLRSAPALSSDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...GCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EGCLHAAVADTVTVSELVLFAAL*RQAREA
Trigger: TGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAG...GACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTVIDGV*YHGFQA
Trigger: CGCCTGGAACCCGTGGTATCAGACGCCATCTATGAC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTCTGCTCCTGAGCATTaGCGTCAGCCCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQSAPEH*RQPQRP
Trigger: TGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGA...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATCTGCTCCTGAGCATTaGCGTCAGCCCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNASAPEH*RQPQRP
Trigger: TGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACACAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTQAACQ*DVVVLH
Trigger: GTGGAGCACGACAACATCTCATTGGCAGGCTGCCTG...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGGCGGGCCGGCTCTCTaGGCACCTTTGGATGCACTT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLGGPAL*APLDAL
Trigger: AAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGTCTCGGAGCTCGTCTATTTGCTGCCTTGTGGAGGCAGGCGAGAGAGGCAGCGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSRSSSICCLVEAGERGSELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...GCTGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACCCCGCGGAGGGACGTaGAGAGAAATGACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQPRGGT*REMTAG
Trigger: CCCGGCGGTCATTTCTCTTCACGTCCCTCCGCGGGG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS-3UTR GCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGGAAACCTCCTCTTCCTaGCCCGGCTCGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQETSSS*PGSLVH
Trigger: GTGCACCAGCGAGCCGGGGCAGGAAGAGGAGGTTTC...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACCGCCACTACCAAACATaGCTCCGCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNRHYQT*LRLQLQ
Trigger: CTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCG...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACGCCACTACCAAACATaGCTCCGCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSRHYQT*LRLQLQ
Trigger: CTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCG...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTGPSPS*YMQGCG
Trigger: ACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGCACTGGGCTGGAGGCTaGCTGGATCACTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVHWAGG*LDHFNC
Trigger: GCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTG...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGAGCTCATTCCACAGTaGCAAGCAGACAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVELIPQ*QADSLA
Trigger: TGCCAGGCTGTCTGCTTGGCACTGTGGAATGAGCTC...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCGCGGGCCTGCCGGCTaGAGAAGGAAGAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLRGPAG*RRKRRR
Trigger: CCGCCGCCTCTTCCTTCTCCAGCCGGCAGGCCCGCG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000652619.1
CDS-3UTR CCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCCGCGTTCGGCCTCCTaGCGCGGGTGGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTPRSAS*RGWALP
Trigger: AGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000652619.1
CDS-3UTR CCA 90 bp ATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGGATCTGCTCCTGCTGCGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: IQVIERLKVLHQGICSCCAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...GCAGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLCTAVR*RWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCA...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGTCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVSDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCATGGCTAGATGAATaGCATTCAGACCGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: GAKQSYPSGPEGSGRPQPSWLDE*HSDRPR
Trigger: ACGGGGACGGTCTGAATGCCATTCATCTAGCCATGA...GGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCGTATGGGCCATCTGTTaGCAGTGCCATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GSLPMRCCRAPQPGAVLCVWAIC*QCHLWL
Trigger: CAACCACAGATGGCACTGCCAACAGATGGCCCATAC...GCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAAGTATGGGCCATCTGTTaGCAGTGCCATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQVWAIC*QCHLWL
Trigger: CAACCACAGATGGCACTGCCAACAGATGGCCCATAC...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 72 bp GAGGCACCACTGGTCAGAGACTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACA +
Preference number: 4 (lower is better)
Translates to: EAPLVRDSVKLS*RKDVSTPLSQT
Trigger: TGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGAGTCTCTGACCAGTGGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNVIDGV*YHGFQA
Trigger: CGCCTGGAACCCGTGGTATCAGACGCCATCTATGAC...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCTTGGGCATGAGCTTCTaGCGTTTCCTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: RVTQAVQKAQVGPSPQQILGMSF*RFLCTS
Trigger: AGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAA...GATTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTCTGCTCCTGAGCATTaGCGTCAGCCCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSAPEH*RQPQRP
Trigger: TGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACGGCGGGCCGGCTCTCTaGGCACCTTTGGATGCACTT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHGGPAL*APLDAL
Trigger: AAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCC...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCGGCGGGCCGGCTCTCTaGGCACCTTTGGATGCACTT +
Preference number: 4 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGGGPAL*APLDAL
Trigger: AAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCC...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACGAAACCTCCTCTTCCTaGCCCGGCTCGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYETSSS*PGSLVH
Trigger: GTGCACCAGCGAGCCGGGGCAGGAAGAGGAGGTTTC...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTCCCGATCTCCCAGCTaGCGGTCCCCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWSRSPS*RSPPPS
Trigger: AGAAGGTGGAGGGGACCGGCAGCTGGGAGATCGGGA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCCACCACATCTTCCTGCTTATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATT +
Preference number: 4 (lower is better)
Translates to: KAQVGPSPQQILHHIFLLISLVC*RAAWRI
Trigger: AATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGAT...AAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCSISLV*CRAAWR
Trigger: CCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCGCCACTACCAAACATaGCTCCGCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLRHYQT*LRLQLQ
Trigger: CTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVECSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CATTTTCCCAAGAGTCATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGTGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: HFPKSHPGHREAQSSPPGCSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...CCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGATGACTCTTGGGAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RVTQAVQKAQVGPSPQQINEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...GATTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCGPSPS*YMQGCG
Trigger: ACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCC...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GCATCTTCACGTCTCCTGTCACCGCGTAGTCGAAAAGGGCATTGGCATGCCTCTCGGAGCTCGTCTATTTaGTGCCTTGTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASSRLLSPRSRKGHWHASRSSSI*CLVEAG
Trigger: GCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCG...AGAGGCATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGCATTCTGAAGCCGGGTaGCGAGTCCGCGTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWHSEAG*RVRVRP
Trigger: AGGCCGAACGCGGACTCGCCACCCGGCTTCAGAATG...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR CCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCAACGGTGGCCTCGCTaGGCTCCTGATCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCQRWPR*APDLAL
Trigger: CAGAGCAAGATCAGGAGCCCAGCGAGGCCACCGTTG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAACCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 4 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACATGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCVIDGV*YHGFQA
Trigger: CGCCTGGAACCCGTGGTATCAGACGCCATCTATGAC...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CATTTTCCCAAGAGTCATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGCATCCTGCACAGCAGTaGGATGGCGCTGGACGGCCA +
Preference number: 4 (lower is better)
Translates to: HFPKSHPGHREAQSSPPGHPAQQ*DGAGRP
Trigger: TGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATG...CCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGATGACTCTTGGGAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SNTCQLVAISRGVVPGTTQAACQ*DVVVLH
Trigger: GTGGAGCACGACAACATCTCATTGGCAGGCTGCCTG...AGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTCCCGATCTCCCAGCTaGCGGTCCCCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFSRSPS*RSPPPS
Trigger: AGAAGGTGGAGGGGACCGGCAGCTGGGAGATCGGGA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNASISLV*CRAAWR
Trigger: CCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCGCCACTACCAAACATaGCTCCGCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHRHYQT*LRLQLQ
Trigger: CTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACACTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGGGCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCTCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: WASPSRSRQPANEMLSCSSTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...GGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCCTCCACCACATCTTCCTGCTTAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: KAQVGPSPQQILHHIFLLNEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...AAGCAGGAAGATGTGGTGGAGGATTTGCTGAGGGCTGGGGCCGACCTGAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAGPSPS*YMQGCG
Trigger: ACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCC...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCCFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACCACTGGGCTGGAGGCTaGCTGGATCACTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNHWAGG*LDHFNC
Trigger: GCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTG...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCGGAGCTCGTCTATTTaGTGCCTTGTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLRSSSI*CLVEAG
Trigger: GCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCGCCATCTGTTGGCAGTaGCATCTGTGGTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: KTELPKRSRRLRSAPALSAICWQ*HLWLKY
Trigger: GTATTTCAACCACAGATGGCACTGCCAACAGATGGC...GCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACGGCCGACTAGCCCCTaGGAGGTCCGGATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQRPTSP*EVRMCL
Trigger: AAGACACATCCGGACCTCGCAGGGGCTAGTCGGCCG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTGCCGGGCCGCTCCGGTaGCGAAACCTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLAGPLR*RNLLFL
Trigger: CAGGAAGAGGAGGTTTCGCCACCGGAGCGGCCCGGC...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFCTAVR*RWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAATGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQCTAVR*RWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCA...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTGTCATGGCTAGATGAATaGCATTCAGACCGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LHAAVADTVTVSELVYLLSWLDE*HSDRPR
Trigger: ACGGGGACGGTCTGAATGCCATTCATCTAGCCATGA...CAGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GCATCTTCACGTCTCCTGTCACCGCGTAGTCGAAAAGGGCATTGGCATGCCTCTCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASSRLLSPRSRKGHWHASLFAAL*RQAREA
Trigger: TGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAG...AGAGGCATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTGCAAAATGATGCTGTaGTCAGAAGGAATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GAKQSYPSGPEGSGRPQPCKMML*SEGMPG
Trigger: ACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA...GGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCCAGAGAGCACGGAATaGCTGGACCACAGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYPESTE*LDHSLA
Trigger: TGCGAGGCTGTGGTCCAGCCATTCCGTGCTCTCTGG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTGTTCCAGGCGCCTTGTaGAGCTGCCAGTGCTATCCG +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFVPGAL*SCQCYP
Trigger: CGGATAGCACTGGCAGCTTCACAAGGCGCCTGGAAC...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAGTTCCAGGCGCCTTGTaGAGCTGCCAGTGCTATCCG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEVPGAL*SCQCYP
Trigger: CGGATAGCACTGGCAGCTTCACAAGGCGCCTGGAAC...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAGTTCCAGGCGCCTTGTaGAGCTGCCAGTGCTATCCG +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQVPGAL*SCQCYP
Trigger: CGGATAGCACTGGCAGCTTCACAAGGCGCCTGGAAC...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGCACAGCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACTTGGGCATGAGCTTCTaGCGTTTCCTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: ILILHSSEMALDGQQHLHLGMSF*RFLCTS
Trigger: AGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAA...GTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCGCCTCGCTGGGCTCCTaGTCTTGCTCTGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCASLGS*SCSVVS
Trigger: TGAAACCACAGAGCAAGATCAGGAGCCCAGCGAGGC...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGCAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWQAACQ*DVVVLH
Trigger: GTGGAGCACGACAACATCTCATTGGCAGGCTGCCTG...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGGCAGCGAGTGGGCCTaGGAGGTGGTCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLGSEWA*EVVFTG
Trigger: CCCAGTGAAGACCACCTCTCAGGCCCACTCGCTGCC...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCCTTCATCATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PASWWPYLEAWFQAQLLHHGAFC*ELAVRH
Trigger: GTGCCTCACTGCTAACTCTCAACAAAATGCCCCATG...ATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATGGCGGGCCGGCTCTCTaGGCACCTTTGGATGCACTT +
Preference number: 4 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNGGPAL*APLDAL
Trigger: AAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCC...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTGTCCCCTCCACCTTCTaGTTGCAAATAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCVPSTF*LQIGKV
Trigger: GACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGAC...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATT +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCISLVC*RAAWRI
Trigger: AATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGAT...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCGCCACTACCAAACATaGCTCCGCCTCCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSERHYQT*LRLQLQ
Trigger: CTGGAGCTGGAGGCGGAGGCATGTTTGGTAGTGGCG...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAATGCCTCTTTGCAAGCTaGATAGCCTTCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQCLFAS*IAFSRK
Trigger: CTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCA...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTGATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHAAVADTVTVSELVYLLIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...CAGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCGPSPS*YMQGCG
Trigger: ACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCC...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYGPSPS*YMQGCG
Trigger: ACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCC...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTGCAAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GAKQSYPSGPEGSGRPQPSNLYS*SFTSSA
Trigger: GGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACT...GGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGCACTGGGCTGGAGGCTaGCTGGATCACTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQHWAGG*LDHFNC
Trigger: GCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTG...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GCATCTTCACGTCTCCTGTCACCGCGTAGTCGAAAAGGGCATTGGCATGCCTCTTGTGGTCAGAAGGAATaGCAGGTGGCGACCGTGATA +
Preference number: 4 (lower is better)
Translates to: ASSRLLSPRSRKGHWHASCGQKE*QVATVI
Trigger: TATCACGGTCGCCACCTGGCATTCCTTCTGACCACA...AGAGGCATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCCTTCATTTTCCCACCAGGCTGTaGGCATGCAGGTGGATATTT +
Preference number: 4 (lower is better)
Translates to: PASWWPYLEAWFQAQLLHFPTRL*ACRWIF
Trigger: AAATATCCACCTGCATGCCCACAGCCTGGTGGGAAA...ATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCCTTTACTGTCATAGATaGCGTCTGATACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: KTELPKRSRRLRSAPALSLYCHR*RLIPRV
Trigger: AACCCGTGGTATCAGACGCCATCTATGACAGTAAAG...GCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTDFLRS*TNTEAG
Trigger: ACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAACGGTGGCCTCGCTaGGCTCCTGATCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQQRWPR*APDLAL
Trigger: CAGAGCAAGATCAGGAGCCCAGCGAGGCCACCGTTG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNASDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGTAGTACTGTCCACATaGGCATCACCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLVVLST*ASPSRS
Trigger: GCTCCTGGAGGGTGATGCCCATGTGGACAGTACTAC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTAGTACTGTCCACATaGGCATCACCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFVVLST*ASPSRS
Trigger: GCTCCTGGAGGGTGATGCCCATGTGGACAGTACTAC...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGGGGCTGGAGGCTGCCTaGATCACTTCAATTGCTTCG +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQGLEAA*ITSIAS
Trigger: CGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCC...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGGGCTGGAGGCTGCCTaGATCACTTCAATTGCTTCG +
Preference number: 4 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFGLEAA*ITSIAS
Trigger: CGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCC...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCLFAAL*RQAREA
Trigger: TGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGAGAGCACGGAATGGCTaGACCACAGCCTCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQRARNG*TTASQH
Trigger: GTGCTGCGAGGCTGTGGTCCAGCCATTCCGTGCTCT...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
3UTR CAA 72 bp TGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAGCTCTCTGACTGTACC +
Preference number: 4 (lower is better)
Translates to: CLDHFNCFGVAH*SQGLHQLSDCT
Trigger: GGTACAGTCAGAGAGCTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQVIDGV*YHGFQA
Trigger: CGCCTGGAACCCGTGGTATCAGACGCCATCTATGAC...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGCCTCGCTGGGCTCCTaGTCTTGCTCTGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEASLGS*SCSVVS
Trigger: TGAAACCACAGAGCAAGATCAGGAGCCCAGCGAGGC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGGCCTCGCTGGGCTCCTaGTCTTGCTCTGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQASLGS*SCSVVS
Trigger: TGAAACCACAGAGCAAGATCAGGAGCCCAGCGAGGC...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTCTGCTCCTGAGCATTaGCGTCAGCCCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLSAPEH*RQPQRP
Trigger: TGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGCGGGCCGGCTCTCTaGGCACCTTTGGATGCACTT +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTGGPAL*APLDAL
Trigger: AAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCC...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGGACGTGAAGAGAAATaGCCGCCGGGCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQGREEK*PPGGRG
Trigger: GCCGCGGCCGCCCGGCGGTCATTTCTCTTCACGTCC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTCCCGATCTCCCAGCTaGCGGTCCCCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLSRSPS*RSPPPS
Trigger: AGAAGGTGGAGGGGACCGGCAGCTGGGAGATCGGGA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFSISLV*CRAAWR
Trigger: CCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGTGCCTCTTTGCAAGCTaGATAGCCTTCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVCLFAS*IAFSRK
Trigger: CTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCA...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTTGCTCCACAGCCAGGTaGAGTGCTGTGCGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEICSTAR*SAVRPD
Trigger: GTCCGGGCGCACAGCACTGCACCTGGCTGTGGAGCA...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYCFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHCFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACAGCTCGTCTATTTGCTaGCTTGTGGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSSSIC*LVEAGE
Trigger: CTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCT...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCAGCTCGTCTATTTGCTaGCTTGTGGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCSSSIC*LVEAGE
Trigger: CTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCT...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCGGAGCTCGTCTATTTaGTGCCTTGTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTRSSSI*CLVEAG
Trigger: GCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGCAGCAGGCTAAATTTTaGCTTCTAGAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVQQAKF*LLEVLP
Trigger: AGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SPRRCRRHCHCLGARLFALSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...AGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCATTCTGAAGCCGGGTaGCGAGTCCGCGTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLHSEAG*RVRVRP
Trigger: AGGCCGAACGCGGACTCGCCACCCGGCTTCAGAATG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGCGACCACCATGTCCTTaGGTCCAGCAGTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVRPPCP*VQQLQC
Trigger: GCACTGTAACTGCTGGACCCAAGGACATGGTGGTCG...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCGACCACCATGTCCTTaGGTCCAGCAGTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYRPPCP*VQQLQC
Trigger: GCACTGTAACTGCTGGACCCAAGGACATGGTGGTCG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCCGACCACCATGTCCTTaGGTCCAGCAGTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCRPPCP*VQQLQC
Trigger: GCACTGTAACTGCTGGACCCAAGGACATGGTGGTCG...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGCACCATTCCCAACGGTaGCCTCGCTGGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRHHSQR*PRWAPD
Trigger: ATCAGGAGCCCAGCGAGGCCACCGTTGGGAATGGTG...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATCACCATTCCCAACGGTaGCCTCGCTGGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNHHSQR*PRWAPD
Trigger: ATCAGGAGCCCAGCGAGGCCACCGTTGGGAATGGTG...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: GSLPMRCCRAPQPGAVLCGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...GCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACACAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACGGGCTGGAGGCTGCCTaGATCACTTCAATTGCTTCG +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHGLEAA*ITSIAS
Trigger: CGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCC...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTGGTGGGCTGGAGGCTGCCTaGATCACTTCAATTGCTTCG +
Preference number: 4 (lower is better)
Translates to: YCSSWLDEWHSDRPRWGGGLEAA*ITSIAS
Trigger: CGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCC...ACCACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTGTCTCGGAGCTCGTCTATTTGCTGCCTTGTGGAGGCAGGCGAGAGAGGCAGCTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSRSSSICCLVEAGERGSLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...GCTGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACCTGAGGCCAGCTCTTaGGAGATCCAAAAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAPEASS*EIQKAN
Trigger: GTTGGCTTTTTGGATCTCCCAAGAGCTGGCCTCAGG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp AACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAATTTTTCTTTGTCACATaGAGTATACCCAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: NRVTQAVQKAQVGPSPQQFFFVT*SIPRFA
Trigger: CGCAAACCTGGGTATACTTCATGTGACAAAGAAAAA...TTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLLHTLE*PHHSQR
Trigger: CCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAA...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQLHTLE*PHHSQR
Trigger: CCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAA...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLLIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAHGAFC*ELAVRH
Trigger: GTGCCTCACTGCTAACTCTCAACAAAATGCCCCATG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLHGAFC*ELAVRH
Trigger: GTGCCTCACTGCTAACTCTCAACAAAATGCCCCATG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACATATGGATCATCTTCTaGCATTCTGAAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNIWIIF*HSEAGW
Trigger: CCACCCGGCTTCAGAATGGCAGAAGATGATCCATAT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTCCAGCAGTTACAGTaGAGATCCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAVQQLQ*RSHPHS
Trigger: ACTGTGAGGATGGGATCTGCACTGTAACTGCTGGAC...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGGTCCCCTCCACCTTCTaGTTGCAAATAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVVPSTF*LQIGKV
Trigger: GACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGAC...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATT +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVISLVC*RAAWRI
Trigger: AATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGAT...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTCAGCCGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTGCGCCAGAGTATCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSRKALLSIPRPNFCARVSISLV*CRAAWR
Trigger: CCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGA...TACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCCTTCATGTGTCCATGGTTCCATaGTTCATCCCAGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: PASWWPYLEAWFQAQLLHVSMVP*FIPALD
Trigger: ATCTAATGCTGGGATGAAGCATGGAACCATGGACAC...ATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACATGCCTCTTTGCAAGCTaGATAGCCTTCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTCLFAS*IAFSRK
Trigger: CTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCA...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGCTCCCAGCTGCTATATaGAGGGGTGTGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGLPAAI*RGVVPS
Trigger: CGATGGAACCACACCCCTGCATATAGCAGCTGGGAG...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACTCCCAGCTGCTATATaGAGGGGTGTGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVELPAAI*RGVVPS
Trigger: CGATGGAACCACACCCCTGCATATAGCAGCTGGGAG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGAATATGTCAAATACCTaGCAGCTGGTGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVNMSNT*QLVAIS
Trigger: AGATATGGCCACCAGCTGGCAGGTATTTGACATATT...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLPRPNF*ARVAQF
Trigger: AAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACACTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTLDHFN*FGVAHL
Trigger: CAAATGGGCTACACCGAAGCAATTGAAGTGATCCAG...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGCACAGCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACCTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: ILILHSSEMALDGQQHLHLDHFN*FGVAHL
Trigger: CAAATGGGCTACACCGAAGCAATTGAAGTGATCCAG...GTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACACTGGGCTGGAGGCTaGCTGGATCACTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQHWAGG*LDHFNC
Trigger: GCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAGCTCGTCTATTTGCTaGCTTGTGGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGSSSIC*LVEAGE
Trigger: CTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGAGCTCGTCTATTTGCTaGCTTGTGGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAESSSIC*LVEAGE
Trigger: CTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCT...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGGATCTGCTCCTGCTGCCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: IQVIERLKVLHQGICSCCLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...GCAGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYNLIPR*IRSASV
Trigger: AACACTGGCTGAGCGGATGCATCTGGGGATGAGGTT...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTGTGGTCAGAAGGAATaGCAGGTGGCGACCGTGATA +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHCGQKE*QVATVI
Trigger: TATCACGGTCGCCACCTGGCATTCCTTCTGACCACA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGTGTGGTCAGAAGGAATaGCAGGTGGCGACCGTGATA +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVCGQKE*QVATVI
Trigger: TATCACGGTCGCCACCTGGCATTCCTTCTGACCACA...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAATTATTCCAAGAGCTaGTTGGGCACAGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNNYSKS*LGTGSE
Trigger: CTCACTCCCTGTGCCCAAGCAGCTCTTGGAATAATT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGCATCAAAGAAGACCTaGATTTTCTCCGGATTACAG +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVASKKT*IFSGLQ
Trigger: CTGTAATCCGGAGAAAATGCAGGTCTTCTTTGATGC...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCCGGGCCGCTCCGGTaGCGAAACCTCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQAGPLR*RNLLFL
Trigger: CAGGAAGAGGAGGTTTCGCCACCGGAGCGGCCCGGC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR CCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTGGGCCATCTGCTGTTaGCAGTGCCATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFWAICC*QCHLWL
Trigger: CAACCACAGATGGCACTGCCAACAGCAGATGGCCCA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226574.9
CDS-3UTR CCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNACCRAA*RISSFS
Trigger: GGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACACTTTACTGTCATAGATaGCGTCTGATACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTLYCHR*RLIPRV
Trigger: AACCCGTGGTATCAGACGCCATCTATGACAGTAAAG...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLDFLRS*TNTEAG
Trigger: ACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAACAGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KTELPKRSRRLRSAPALSVEERF*FTSFQV
Trigger: GACTTGGAAACTAGTGAACCAAAACCTTTCCTCTAC...GCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCACCATTCCCAACGGTaGCCTCGCTGGGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLHHSQR*PRWAPD
Trigger: ATCAGGAGCCCAGCGAGGCCACCGTTGGGAATGGTG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTGCAGTGAGATGGCGCTaGACGGCCAGCAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVAVRWR*TASSIF
Trigger: GAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGC...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTTGCACAGCAGTGAGATaGCGCTGGACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEICTAVR*RWTASS
Trigger: GCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCA...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAAAGTGCAAGGGCGTCTaGTACAGATCATTTCTCATG +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTKCKGV*YRSFLM
Trigger: CATGAGAAATGATCTGTACCAGACGCCCTTGCACTT...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTAAGTGCAAGGGCGTCTaGTACAGATCATTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SPRRCRRHCHCLGARLFAKCKGV*YRSFLM
Trigger: CATGAGAAATGATCTGTACCAGACGCCCTTGCACTT...AGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGCAGCATCTTCACGTCTCCTGTCACCGCGTAGTCGAAAAGGGCATTGGCATCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: PAASSRLLSPRSRKGHWHQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...ATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGGTAGTACTGTCCACATaGGCATCACCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQVVLST*ASPSRS
Trigger: GCTCCTGGAGGGTGATGCCCATGTGGACAGTACTAC...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGCAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAGGGCTGGAGGCTGCCTaGATCACTTCAATTGCTTCG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEGLEAA*ITSIAS
Trigger: CGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCC...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATTCCTTCCCTCCTGCTaGAGTTTTCACGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAFLPSC*SFHADG
Trigger: TCCATCAGCGTGAAAACTCCAGCAGGAGGGAAGGAA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp ATTCTCATCCTGCACAGCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACCCATTTGTGACCAACTaGACAATAACCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ILILHSSEMALDGQQHLHPFVTN*TITFAG
Trigger: ACCAGCAAAGGTTATTGTTCAGTTGGTCACAAATGG...GTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLVIDGV*YHGFQA
Trigger: CGCCTGGAACCCGTGGTATCAGACGCCATCTATGAC...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLVIDGV*YHGFQA
Trigger: CGCCTGGAACCCGTGGTATCAGACGCCATCTATGAC...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACTTGGGCATGAGCTTCTaGCGTTTCCTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYLGMSF*RFLCTS
Trigger: AGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAA...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTGCCTCGCTGGGCTCCTaGTCTTGCTCTGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVASLGS*SCSVVS
Trigger: TGAAACCACAGAGCAAGATCAGGAGCCCAGCGAGGC...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCLHTLE*PHHSQR
Trigger: CCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAA...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAGAAAGAGGTTATCCTaGACTCCAGCACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNRKRLS*TPALSS
Trigger: AGAAGAGAGTGCTGGAGTTCAGGATAACCTCTTTCT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
CDS-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWLIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHLIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCCATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGHGAFC*ELAVRH
Trigger: GTGCCTCACTGCTAACTCTCAACAAAATGCCCCATG...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATAGGAGGGGGAGTCAGTaGGGATGGGAAGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDRRGSQ*GWEGFE
Trigger: CTCAAAACCTTCCCATCCTCACTGACTCCCCCTCCT...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCCAAGTAGTAGACTTTaGCCTGAAGGGGCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYPSSRL*PEGAKR
Trigger: CCGTTTTGCCCCTTCAGGTCAAAGTCTACTACTTGG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGATATGGATCATCTTCTaGCATTCTGAAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQIWIIF*HSEAGW
Trigger: CCACCCGGCTTCAGAATGGCAGAAGATGATCCATAT...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACCGCCTCTGTCATTCGTaGTTCCAGTGTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNRLCHS*FQCFKY
Trigger: GTATTTGAAACACTGGAAGCACGAATGACAGAGGCG...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGGATCTGCTCCTGCTGCCGCCTCTGTCATTCGTaGTTCCAGTGTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: IQVIERLKVLHQGICSCCRLCHS*FQCFKY
Trigger: GTATTTGAAACACTGGAAGCACGAATGACAGAGGCG...GCAGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAGTCCCCTCCACCTTCTaGTTGCAAATAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQVPSTF*LQIGKV
Trigger: GACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGAC...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTSISLV*CRAAWR
Trigger: CCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGA...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAAAAGGGCATTGGCATaGCTCTTTGCAAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNKRALA*LFASCI
Trigger: TATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGCTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGCTCCCAGCTGCTATATaGAGGGGTGTGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRLPAAI*RGVVPS
Trigger: CGATGGAACCACACCCCTGCATATAGCAGCTGGGAG...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCTGCCAGCTGGTGGCCGGACCCTCTCCCAGCTaGTATATGCAGGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SGSYGFPFNMSNTCQLVAGPSPS*YMQGCG
Trigger: ACCACACCCCTGCATATAGCAGCTGGGAGAGGGTCC...GGCCACCAGCTGGCAGGTATTTGACATATTAAATGGGAAACCATATGAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDCFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTCCTTCATCCTCTCCTaGATTTTCCCAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCSFILS*IFPRVI
Trigger: GATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAAATATGTCAAATACCTaGCAGCTGGTGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTNMSNT*QLVAIS
Trigger: AGATATGGCCACCAGCTGGCAGGTATTTGACATATT...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTCAGCCGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTGCGCCAGAGTAAGCTCGTCTATTTGCTaGCTTGTGGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LSRKALLSIPRPNFCARVSSSIC*LVEAGE
Trigger: CTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCT...TACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNALSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTGTGGTCAGAAGGAATaGCAGGTGGCGACCGTGATA +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTCGQKE*QVATVI
Trigger: TATCACGGTCGCCACCTGGCATTCCTTCTGACCACA...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGCCATCTGTTGGCAGTaGCATCTGTGGTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAAICWQ*HLWLKY
Trigger: GTATTTCAACCACAGATGGCACTGCCAACAGATGGC...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGTTTCCCACCAGGCTGTaGGCATGCAGGTGGATATTT +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVFPTRL*ACRWIF
Trigger: AAATATCCACCTGCATGCCCACAGCCTGGTGGGAAA...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACTGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYCCRAA*RISSFS
Trigger: GGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCA...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHDFLRS*TNTEAG
Trigger: ACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATC...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYDFLRS*TNTEAG
Trigger: ACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATC...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQSRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLSRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFSDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTCATGGCTAGATGAATaGCATTCAGACCGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSWLDE*HSDRPR
Trigger: ACGGGGACGGTCTGAATGCCATTCATCTAGCCATGA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACTCATGGCTAGATGAATaGCATTCAGACCGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYSWLDE*HSDRPR
Trigger: ACGGGGACGGTCTGAATGCCATTCATCTAGCCATGA...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CATTTTCCCAAGAGTCATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGCAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: HFPKSHPGHREAQSSPPGQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...CCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGATGACTCTTGGGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACAAATACCTGCCAGCTaGTGGCCATATCTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEQIPAS*WPYLEA
Trigger: CGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNLFAAL*RQAREA
Trigger: TGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAG...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFLFAAL*RQAREA
Trigger: TGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAG...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATCTATTTGCTGCCTTGTaGAGGCAGGCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDLFAAL*RQAREA
Trigger: TGCCTCTCTCGCCTGCCTCCACAAGGCAGCAAATAG...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGTATGGGCCATCTGTTaGCAGTGCCATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEVWAIC*QCHLWL
Trigger: CAACCACAGATGGCACTGCCAACAGATGGCCCATAC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCCTTCATTTTTTCTTTGTCACATaGAGTATACCCAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: PASWWPYLEAWFQAQLLHFFFVT*SIPRFA
Trigger: CGCAAACCTGGGTATACTTCATGTGACAAAGAAAAA...ATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTTGGGCATGAGCTTCTaGCGTTTCCTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAELGMSF*RFLCTS
Trigger: AGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCCTCGCTGGGCTCCTaGTCTTGCTCTGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIASLGS*SCSVVS
Trigger: TGAAACCACAGAGCAAGATCAGGAGCCCAGCGAGGC...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAELHTLE*PHHSQR
Trigger: CCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTTGCATACGTTAGAGTaGCCTCACCATTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTLHTLE*PHHSQR
Trigger: CCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAA...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTCCACGCCGCTGTCGCAGACACTGTCACTGTCTCGGAGCTCGTCTATTTGCTAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPRRCRRHCHCLGARLFAKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...AGCAAATAGACGAGCTCCGAGACAGTGACAGTGTCTGCGACAGCGGCGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTLIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGCTCATCATGGCTAGATaGATGGCATTCAGACCGTCC +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAELIMAR*MAFRPS
Trigger: GGACGGTCTGAATGCCATTCATCTAGCCATGATGAG...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAGGCACCAGCTGTATTaGGAAGTGTGCAAATTATTC +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNRHQLY*EVCKLF
Trigger: GAATAATTTGCACACTTCTCAATACAGCTGGTGCCT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTGTGTCCATGGTTCCATaGTTCATCCCAGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCVSMVP*FIPALD
Trigger: ATCTAATGCTGGGATGAAGCATGGAACCATGGACAC...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGCCTCTTTGCAAGCTaGATAGCCTTCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLCLFAS*IAFSRK
Trigger: CTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCA...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWSTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCSTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAACATGGCAGGCTATTaGTCATCATGGCTAGATGAA +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNNMAGY*SSWLDE
Trigger: TTCATCTAGCCATGATGAGCAATAGCCTGCCATGTT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQNEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTNEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLCFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTGCTTTGAGAAGAGCTaGCAGCCTGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLCFEKS*QPGGPS
Trigger: AGAGGGTCCACCAGGCTGGCAGCTCTTCTCAAAGCA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTGGGATCTGCTCCTGCTaGTTTGAGAAGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLGICSC*FEKSCQ
Trigger: CTGGCAGCTCTTCTCAAAGCAGCAGGAGCAGATCCC...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTCTCCACCAGGGGATCTaGTCCTGCTGCTTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVLHQGI*SCCFEK
Trigger: CTTCTCAAAGCAGCAGGAGCAGATCCCCTGGTGGAG...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATCCTTCATCCTCTCCTaGATTTTCCCAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNASFILS*IFPRVI
Trigger: GATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCTATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTTCCTTCATCCTCTCCTaGATTTTCCCAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: GYCSSWLDEWHSDRPRWGSFILS*IFPRVI
Trigger: GATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGA...ACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEPRPNF*ARVAQF
Trigger: AAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQPRPNF*ARVAQF
Trigger: AAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTCCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFPRPNF*ARVAQF
Trigger: AAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGG...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNALDHFN*FGVAHL
Trigger: CAAATGGGCTACACCGAAGCAATTGAAGTGATCCAG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTAGCTCGTCTATTTGCTaGCTTGTGGAGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLSSSIC*LVEAGE
Trigger: CTCGCCTGCCTCCACAAGGCAGCAAATAGACGAGCT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACAGCAGGCTAAATTTTaGCTTCTAGAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAQQAKF*LLEVLP
Trigger: AGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCAGCAGGCTAAATTTTaGCTTCTAGAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCQQAKF*LLEVLP
Trigger: AGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDNLIPR*IRSASV
Trigger: AACACTGGCTGAGCGGATGCATCTGGGGATGAGGTT...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAGTGAGAAATCATGGTaGTCCTACCAAGTAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNSEKSW*SYQVVD
Trigger: GTCTACTACTTGGTAGGAGCACCATGATTTCTCACT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp CCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCCTTCATAACAATAACCTTTGCTaGTCCCACATAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PASWWPYLEAWFQAQLLHNNNLC*SHIVAD
Trigger: ATCTGCAACTATGTGGGACCAGCAAAGGTTATTGTT...ATGAAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAATTTCCCACCAGGCTGTaGGCATGCAGGTGGATATTT +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQFPTRL*ACRWIF
Trigger: AAATATCCACCTGCATGCCCACAGCCTGGTGGGAAA...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCGACCACCATGTCCTTaGGTCCAGCAGTTACAGTGC +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLRPPCP*VQQLQC
Trigger: GCACTGTAACTGCTGGACCCAAGGACATGGTGGTCG...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTTGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFCCRAA*RISSFS
Trigger: GGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCA...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGTGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSECCRAA*RISSFS
Trigger: GGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCA...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGCTTTACTGTCATAGATaGCGTCTGATACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQLYCHR*RLIPRV
Trigger: AACCCGTGGTATCAGACGCCATCTATGACAGTAAAG...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTVEERF*FTSFQV
Trigger: GACTTGGAAACTAGTGAACCAAAACCTTTCCTCTAC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVRKSIV*EAIPWT
Trigger: GGTCCAGGGTATAGCTTCCCACACTATGGATTTCCT...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTAAGTGCAAGGGCGTCTaGTACAGATCATTTCTCATG +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLKCKGV*YRSFLM
Trigger: CATGAGAAATGATCTGTACCAGACGCCCTTGCACTT...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGTCAGACCGTCCCCGTTaGGGTGGTCAAGAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTSDRPR*GGQEVV
Trigger: CACTACTTCTTGACCACCCCAACGGGGACGGTCTGA...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGGATCTGCTCCTGCTGCGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: IQVIERLKVLHQGICSCCGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...GCAGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTGTAGTACTGTCCACATaGGCATCACCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLVVLST*ASPSRS
Trigger: GCTCCTGGAGGGTGATGCCCATGTGGACAGTACTAC...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTCTTCACTGGGCTaGAGGCTGCCTGGATCACTT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLWSSLG*RLPGSL
Trigger: AAGTGATCCAGGCAGCCTCCAGCCCAGTGAAGACCA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAGGGCTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GGCLDHFNCFGVAHLSQGLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...GCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCSASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGTATGGGCCATCTGTTaGCAGTGCCATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRVWAIC*QCHLWL
Trigger: CAACCACAGATGGCACTGCCAACAGATGGCCCATAC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGCCATTTGTGACCAACTaGACAATAACCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQPFVTN*TITFAG
Trigger: ACCAGCAAAGGTTATTGTTCAGTTGGTCACAAATGG...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTTTTTCTTTGTCACATaGAGTATACCCAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCFFFVT*SIPRFA
Trigger: CGCAAACCTGGGTATACTTCATGTGACAAAGAAAAA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCAGAAAGAGGTTATCCTaGACTCCAGCACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCRKRLS*TPALSS
Trigger: AGAAGAGAGTGCTGGAGTTCAGGATAACCTCTTTCT...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
CDS-3UTR TCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGCAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAQAACQ*DVVVLH
Trigger: GTGGAGCACGACAACATCTCATTGGCAGGCTGCCTG...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTGAGCTACAAATGAAGTaGTGTGGGATTTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCELQMK*CGISKK
Trigger: CTTCTTTGAAATCCCACATCACTTCATTTGTAGCTC...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGTCCAGCAGTTACAGTaGAGATCCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRVQQLQ*RSHPHS
Trigger: ACTGTGAGGATGGGATCTGCACTGTAACTGCTGGAC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLISLVC*RAAWRI
Trigger: AATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGAT...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATT +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVISLVC*RAAWRI
Trigger: AATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGAT...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATT +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTISLVC*RAAWRI
Trigger: AATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGAT...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACGTGTCCATGGTTCCATaGTTCATCCCAGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHVSMVP*FIPALD
Trigger: ATCTAATGCTGGGATGAAGCATGGAACCATGGACAC...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGGTGTCCATGGTTCCATaGTTCATCCCAGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVVSMVP*FIPALD
Trigger: ATCTAATGCTGGGATGAAGCATGGAACCATGGACAC...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTGCCTCTTTGCAAGCTaGATAGCCTTCTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWCLFAS*IAFSRK
Trigger: CTTTCTAGAGAAGGCTATGCAGCTTGCAAAGAGGCA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAAAGGGCATTGGCATaGCTCTTTGCAAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWKRALA*LFASCI
Trigger: TATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTT...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGTCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSESTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCTATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTAACATGGCAGGCTATTaGTCATCATGGCTAGATGAA +
Preference number: 4 (lower is better)
Translates to: GYCSSWLDEWHSDRPRWGNMAGY*SSWLDE
Trigger: TTCATCTAGCCATGATGAGCAATAGCCTGCCATGTT...ACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGTCCTTCATCCTCTCCTaGATTTTCCCAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVSFILS*IFPRVI
Trigger: GATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGA...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTAATATGTCAAATACCTaGCAGCTGGTGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFNMSNT*QLVAIS
Trigger: AGATATGGCCACCAGCTGGCAGGTATTTGACATATT...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQSNLYS*SFTSSA
Trigger: GGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACT...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTCAGCCGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTGCGCCAGAGTACCCAGACCTAATTTCTaGGCCAGAGTAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSRKALLSIPRPNFCARVPRPNF*ARVAQF
Trigger: AAACTGGGCTACTCTGGCGCAGAAATTAGGTCTGGG...TACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLNLIPR*IRSASV
Trigger: AACACTGGCTGAGCGGATGCATCTGGGGATGAGGTT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGTGTGGTCAGAAGGAATaGCAGGTGGCGACCGTGATA +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTCGQKE*QVATVI
Trigger: TATCACGGTCGCCACCTGGCATTCCTTCTGACCACA...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGCCATCTGTTGGCAGTaGCATCTGTGGTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEAICWQ*HLWLKY
Trigger: GTATTTCAACCACAGATGGCACTGCCAACAGATGGC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTATATGGATCATCTTCTaGCATTCTGAAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SNTCQLVAISRGVVPGTTIWIIF*HSEAGG
Trigger: ACCACCAGCTTCAGAATGGCAGAAGATGATCCATAT...AGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGTGTTTCCTTCCCTCCTaGTGGAGTTTTCACGCTGAT +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQCFLPS*WSFHAD
Trigger: ATCAGCGTGAAAACTCCAGCAGGAGGGAAGGAAACA...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACAACAATAACCTTTGCTaGTCCCACATAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNNNNLC*SHIVAD
Trigger: ATCTGCAACTATGTGGGACCAGCAAAGGTTATTGTT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRCCRAA*RISSFS
Trigger: GGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCA...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCTTTACTGTCATAGATaGCGTCTGATACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYLYCHR*RLIPRV
Trigger: AACCCGTGGTATCAGACGCCATCTATGACAGTAAAG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGCTTTACTGTCATAGATaGCGTCTGATACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVLYCHR*RLIPRV
Trigger: AACCCGTGGTATCAGACGCCATCTATGACAGTAAAG...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTCAAGTTGGATGCATTaGGGGCTTTACTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQSSWMH*GLYCHR
Trigger: TCTATGACAGTAAAGCCCCCAATGCATCCAACTTGA...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTCAAGTTGGATGCATTaGGGGCTTTACTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLSSWMH*GLYCHR
Trigger: TCTATGACAGTAAAGCCCCCAATGCATCCAACTTGA...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQRKSIV*EAIPWT
Trigger: GGTCCAGGGTATAGCTTCCCACACTATGGATTTCCT...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSERKSIV*EAIPWT
Trigger: GGTCCAGGGTATAGCTTCCCACACTATGGATTTCCT...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVESRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCAAGTGCAAGGGCGTCTaGTACAGATCATTTCTCATG +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCKCKGV*YRSFLM
Trigger: CATGAGAAATGATCTGTACCAGACGCCCTTGCACTT...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CATCCCAGCATTAGATTTAGTAGTTCCAGGATGGAAAGTAATCCCACCATAAGTCCGTCCCCGTTGGGGTaGTCAAGAAGTAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HPSIRFSSSRMESNPTISPSPLG*SRSSAA
Trigger: GGCAGCACTACTTCTTGACCACCCCAACGGGGACGG...ACTTATGGTGGGATTACTTTCCATCCTGGAACTACTAAATCTAATGCTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652569.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTCATGGCTAGATGAATaGCATTCAGACCGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRSWLDE*HSDRPR
Trigger: ACGGGGACGGTCTGAATGCCATTCATCTAGCCATGA...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAATCAGATGTAAACTCTaGCTCATATGGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTIRCKL*LIWFPI
Trigger: AATGGGAAACCATATGAGCCAGAGTTTACATCTGAT...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCCATTTGTGACCAACTaGACAATAACCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHPFVTN*TITFAG
Trigger: ACCAGCAAAGGTTATTGTTCAGTTGGTCACAAATGG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTTTTTCTTTGTCACATaGAGTATACCCAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCFFFVT*SIPRFA
Trigger: CGCAAACCTGGGTATACTTCATGTGACAAAGAAAAA...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTGGATGTCATCTTTCTaGACTTTGTCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCWMSSF*TLSQRR
Trigger: TCTTCTTTGTGACAAAGTTCAGAAAGATGACATCCA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652619.1
CDS-3UTR TCA 90 bp GCATCTTCACGTCTCCTGTCACCGCGTAGTCGAAAAGGGCATTGGCATGCCTCTTGGATGTCATCTTTCTaGACTTTGTCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ASSRLLSPRSRKGHWHASWMSSF*TLSQRR
Trigger: TCTTCTTTGTGACAAAGTTCAGAAAGATGACATCCA...AGAGGCATGCCAATGCCCTTTTCGACTACGCGGTGACAGGAGACGTGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTTGGGCATGAGCTTCTaGCGTTTCCTCTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLLGMSF*RFLCTS
Trigger: AGAAGTGCAGAGGAAACGTCAGAAGCTCATGCCCAA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GCACTCTCTTCTTTTGTTCCTGTTGCATACGTTAGAGTGACCTCACCATTCCCATTGCATACGTTAGAGTaGCCTCACCATTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: ALSSFVPVAYVRVTSPFPLHTLE*PHHSQR
Trigger: CCGTTGGGAATGGTGAGGTCACTCTAACGTATGCAA...TGGGAATGGTGAGGTCACTCTAACGTATGCAACAGGAACAAAAGAAGAGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
CDS-3UTR TCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGAGAAAGAGGTTATCCTaGACTCCAGCACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTRKRLS*TPALSS
Trigger: AGAAGAGAGTGCTGGAGTTCAGGATAACCTCTTTCT...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
CDS-3UTR TCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGAGAAAGAGGTTATCCTaGACTCCAGCACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQRKRLS*TPALSS
Trigger: AGAAGAGAGTGCTGGAGTTCAGGATAACCTCTTTCT...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
CDS-3UTR TCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCTCTGCTCCTGAGCATTaGCGTCAGCCCCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLSAPEH*RQPQRP
Trigger: TGGCCGCTGGGGCTGACGTCAATGCTCAGGAGCAGA...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLHGAFC*ELAVRH
Trigger: GTGCCTCACTGCTAACTCTCAACAAAATGCCCCATG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACGGTTGCTCTAATATTTaGAGGTATGGGCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHGCSNI*RYGPSV
Trigger: AACAGATGGCCCATACCTTCAAATATTAGAGCAACC...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGTCCAGCAGTTACAGTaGAGATCCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLVQQLQ*RSHPHS
Trigger: ACTGTGAGGATGGGATCTGCACTGTAACTGCTGGAC...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCGCCTCTGTCATTCGTaGTTCCAGTGTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSERLCHS*FQCFKY
Trigger: GTATTTGAAACACTGGAAGCACGAATGACAGAGGCG...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGGTGTCCATGGTTCCATaGTTCATCCCAGCATTAGAT +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTVSMVP*FIPALD
Trigger: ATCTAATGCTGGGATGAAGCATGGAACCATGGACAC...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGATTGGCATGCCTCTTTaGAAGCTGCATAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRIGMPL*KLHSLL
Trigger: GAGAAGGCTATGCAGCTTGCAAAGAGGCATGCCAAT...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGAAAAGGGCATTGGCATaGCTCTTTGCAAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEKRALA*LFASCI
Trigger: TATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTT...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAAAAAGGGCATTGGCATaGCTCTTTGCAAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAKRALA*LFASCI
Trigger: TATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTT...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 4 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCSAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 4 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFSAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACATGGCAGGCTATTaGTCATCATGGCTAGATGAA +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWNMAGY*SSWLDE
Trigger: TTCATCTAGCCATGATGAGCAATAGCCTGCCATGTT...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLNEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGCTCCCAGCTGCTATATaGAGGGGTGTGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQALPAAI*RGVVPS
Trigger: CGATGGAACCACACCCCTGCATATAGCAGCTGGGAG...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCATCCTTCATCCTCTCCTaGATTTTCCCAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGASFILS*IFPRVI
Trigger: GATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGA...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCAATATGTCAAATACCTaGCAGCTGGTGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCNMSNT*QLVAIS
Trigger: AGATATGGCCACCAGCTGGCAGGTATTTGACATATT...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVELDHFN*FGVAHL
Trigger: CAAATGGGCTACACCGAAGCAATTGAAGTGATCCAG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGCGGAGCTCGTCTATTTaGTGCCTTGTGGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQRSSSI*CLVEAG
Trigger: GCCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCG...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACAGCAGGCTAAATTTTaGCTTCTAGAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEQQAKF*LLEVLP
Trigger: AGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SNLIPRCIRSASVVIARYRPSQI*IIFCHS
Trigger: AGAATGGCAGAAGATGATCCATATTTGGGAAGGCCT...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTGGCAGTGCCATCTGTaGTTGAAATACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHWQCHL*LKYFWI
Trigger: AATCCAGAAGTATTTCAACCACAGATGGCACTGCCA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGAACAATAACCTTTGCTaGTCCCACATAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQNNNLC*SHIVAD
Trigger: ATCTGCAACTATGTGGGACCAGCAAAGGTTATTGTT...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTTTCCCACCAGGCTGTaGGCATGCAGGTGGATATTT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLFPTRL*ACRWIF
Trigger: AAATATCCACCTGCATGCCCACAGCCTGGTGGGAAA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTTTCCCACCAGGCTGTaGGCATGCAGGTGGATATTT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLFPTRL*ACRWIF
Trigger: AAATATCCACCTGCATGCCCACAGCCTGGTGGGAAA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGTCAAGTTGGATGCATTaGGGGCTTTACTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVSSWMH*GLYCHR
Trigger: TCTATGACAGTAAAGCCCCCAATGCATCCAACTTGA...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGTATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGTAGTACTGTCCACATaGGCATCACCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAVVLST*ASPSRS
Trigger: GCTCCTGGAGGGTGATGCCCATGTGGACAGTACTAC...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCCATATCTAGAGGCGTaGTTCCAGGCACAACTCCTT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLPYLEA*FQAQLL
Trigger: AAGGAGTTGTGCCTGGAACCACGCCTCTAGATATGG...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGATACCTGCCAGCTGGTaGCCATATCTAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAIPASW*PYLEAW
Trigger: CCACGCCTCTAGATATGGCCACCAGCTGGCAGGTAT...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACATCAGATGTAAACTCTaGCTCATATGGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNIRCKL*LIWFPI
Trigger: AATGGGAAACCATATGAGCCAGAGTTTACATCTGAT...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTGGTTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: YCSSWLDEWHSDRPRWGGSASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...ACCACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGAAATGGAATGTAGTGTaGAATGCCAGAGAGCACGGA +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEKWNVV*NAREHG
Trigger: TCCGTGCTCTCTGGCATTCCACACTACATTCCATTT...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAACGGGAAATAGATTaGAAATGCAGCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGKREID*KCSLRP
Trigger: TGGCCTCAGGCTGCATTTCCAATCTATTTCCCGTTT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTCCATTTGTGACCAACTaGACAATAACCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFPFVTN*TITFAG
Trigger: ACCAGCAAAGGTTATTGTTCAGTTGGTCACAAATGG...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCGTTCCAGGCGCCTTGTaGAGCTGCCAGTGCTATCCG +
Preference number: 4 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLVPGAL*SCQCYP
Trigger: CGGATAGCACTGGCAGCTTCACAAGGCGCCTGGAAC...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTAGAAAGAGGTTATCCTaGACTCCAGCACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFRKRLS*TPALSS
Trigger: AGAAGAGAGTGCTGGAGTTCAGGATAACCTCTTTCT...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
CDS-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCCCGGACTTCTGCTCCTaGGCATTGACGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLPDFCS*ALTSAP
Trigger: TGGGGCTGACGTCAATGCTCAGGAGCAGAAGTCCGG...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGAGTTAAATCGAGAATaGTTCAGGCGGGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAELNRE*FRRAGS
Trigger: AGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTC...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGCTCAGCCAGTGTTGTaGTTGCTAGATACTATCTGT +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRAQPVL*LLDTIC
Trigger: ACAGATAGTATCTAGCAATCACAACACTGGCTGAGC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGGGTTGCTCTAATATTTaGAGGTATGGGCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQGCSNI*RYGPSV
Trigger: AACAGATGGCCCATACCTTCAAATATTAGAGCAACC...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CTCAGCCGGAAGGCATTATTAAGTATCCCCAGACCTAATTTCTGCGCCAGAGTACATCTTCTGCCATTCTaGAGCTGGTGGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSRKALLSIPRPNFCARVHLLPF*SWWFFS
Trigger: TGAAAAGAACCACCAGCTTCAGAATGGCAGAAGATG...TACTCTGGCGCAGAAATTAGGTCTGGGGATACTTAATAATGCCTTCCGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652619.1
CDS-3UTR TCA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATTATGTCATCCAATATaGAAGGCATCAAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNALCHPI*KASKKT
Trigger: GGTCTTCTTTGATGCCTTTCATATTGGATGACATAA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLSTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 4 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAAACATGGCAGGCTATTaGTCATCATGGCTAGATGAA +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQNMAGY*SSWLDE
Trigger: TTCATCTAGCCATGATGAGCAATAGCCTGCCATGTT...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTAATGAGATGTTGTCGTaGTCCACAGCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEINEMLS*STARCS
Trigger: ACTGCACCTGGCTGTGGAGCACGACAACATCTCATT...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CATCCCAGCATTAGATTTAGTAGTTCCAGGATGGAAAGTAATCCCACCATAAGTCTCCCAGCTGCTATATaGAGGGGTGTGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: HPSIRFSSSRMESNPTISLPAAI*RGVVPS
Trigger: CGATGGAACCACACCCCTGCATATAGCAGCTGGGAG...ACTTATGGTGGGATTACTTTCCATCCTGGAACTACTAAATCTAATGCTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652569.1
CDS-3UTR GCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATTCCTTCATCCTCTCCTaGATTTTCCCAAGAGTCATC +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDSFILS*IFPRVI
Trigger: GATGACTCTTGGGAAAATGCAGGAGAGGATGAAGGA...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVESNLYS*SFTSSA
Trigger: GGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACT...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTSNLYS*SFTSSA
Trigger: GGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACT...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFSNLYS*SFTSSA
Trigger: GGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACT...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTCTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFLDHFN*FGVAHL
Trigger: CAAATGGGCTACACCGAAGCAATTGAAGTGATCCAG...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGCACTGGGCTGGAGGCTaGCTGGATCACTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQHWAGG*LDHFNC
Trigger: GCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTG...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCTGAGCACCTTTGGATaGACTTCAGCTTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTLSTFG*TSASVL
Trigger: CAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTATATGGATCATCTTCTaGCATTCTGAAGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFIWIIF*HSEALS
Trigger: GGAGAGAGCTTCAGAATGGCAGAAGATGATCCATAT...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATGGCAGTGCCATCTGTaGTTGAAATACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEWQCHL*LKYFWI
Trigger: AATCCAGAAGTATTTCAACCACAGATGGCACTGCCA...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGTCAAGTTGGATGCATTaGGGGCTTTACTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGSSWMH*GLYCHR
Trigger: TCTATGACAGTAAAGCCCCCAATGCATCCAACTTGA...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTCAAGTTGGATGCATTaGGGGCTTTACTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAESSWMH*GLYCHR
Trigger: TCTATGACAGTAAAGCCCCCAATGCATCCAACTTGA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTTACAATTTTCAAGTTaGATGCATTGGGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQLQFSS*MHWGLY
Trigger: GTAAAGCCCCCAATGCATCCAACTTGAAAATTGTAA...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTTACAATTTTCAAGTTaGATGCATTGGGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLLQFSS*MHWGLY
Trigger: GTAAAGCCCCCAATGCATCCAACTTGAAAATTGTAA...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTGGTGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: YCSSWLDEWHSDRPRWGGVEERF*FTSFQV
Trigger: GACTTGGAAACTAGTGAACCAAAACCTTTCCTCTAC...ACCACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLRKSIV*EAIPWT
Trigger: GGTCCAGGGTATAGCTTCCCACACTATGGATTTCCT...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLRKSIV*EAIPWT
Trigger: GGTCCAGGGTATAGCTTCCCACACTATGGATTTCCT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGAGGAAATCCATAGTGTaGGAAGCTATACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTRKSIV*EAIPWT
Trigger: GGTCCAGGGTATAGCTTCCCACACTATGGATTTCCT...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCCAACGGTGGCCTCGCTaGGCTCCTGATCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLQRWPR*APDLAL
Trigger: CAGAGCAAGATCAGGAGCCCAGCGAGGCCACCGTTG...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLSRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVSRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGTATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCAGCAGCAGCAAACATaGCAGGCTATTGCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLQQQQT*QAIAHH
Trigger: ATGATGAGCAATAGCCTGCCATGTTTGCTGCTGCTG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQSASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAESASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAATCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQSASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR CAA 72 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASV*WTTQWNFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAAGAAGGATCCAAATaGAACATTTGTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWKEGSK*NICSGL
Trigger: AAGGCCTGAACAAATGTTTCATTTGGATCCTTCTTT...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTGGATGTCATCTTTCTaGACTTTGTCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWWMSSF*TLSQRR
Trigger: TCTTCTTTGTGACAAAGTTCAGAAAGATGACATCCA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652619.1
CDS-3UTR TCA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAEKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTCAGGCAGCCTGCCAATaGGATGTTGTCGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSQAACQ*DVVVLH
Trigger: GTGGAGCACGACAACATCTCATTGGCAGGCTGCCTG...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGCATGGGGCATTTTGTTaGGAGTTAGCAGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAHGAFC*ELAVRH
Trigger: GTGCCTCACTGCTAACTCTCAACAAAATGCCCCATG...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGGTTGCTCTAATATTTaGAGGTATGGGCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRGCSNI*RYGPSV
Trigger: AACAGATGGCCCATACCTTCAAATATTAGAGCAACC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTCTGAAGGAACTGAATaGCTCAGGGACATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLSEGTE*LRDICF
Trigger: GAAACAGATGTCCCTGAGTCATTCAGTTCCTTCAGA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGATCTGCTGTTGGCAGTaGCATCTGTGGTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLICCWQ*HLWLKY
Trigger: GTATTTCAACCACAGATGGCACTGCCAACAGCAGAT...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226574.9
CDS-3UTR GCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCGCCTCTGTCATTCGTaGTTCCAGTGTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTRLCHS*FQCFKY
Trigger: GTATTTGAAACACTGGAAGCACGAATGACAGAGGCG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGTCCCCTCCACCTTCTaGTTGCAAATAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQVPSTF*LQIGKV
Trigger: GACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGAC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGCTGCTTAGTGATCACTaGCAAGTGCAAGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQLLSDH*QVQGRL
Trigger: CAGACGCCCTTGCACTTGGCAGTGATCACTAAGCAG...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 4 (lower is better)
Translates to: CKMMLWSEGMPGGDRDTFSAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...AAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTAGTAACTTATACAGCTaGAGCTTCACATCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFSNLYS*SFTSSA
Trigger: GGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACT...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTCTGGATCACTTCAATTaGTTCGGTGTAGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVLDHFN*FGVAHL
Trigger: CAAATGGGCTACACCGAAGCAATTGAAGTGATCCAG...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCAGCAGGCTAAATTTTaGCTTCTAGAGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLQQAKF*LLEVLP
Trigger: AGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQNLIPR*IRSASV
Trigger: AACACTGGCTGAGCGGATGCATCTGGGGATGAGGTT...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTGAAATAGATTGGAAATaGAGCCTGAGGCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLEIDWK*SLRPAL
Trigger: AAGAGCTGGCCTCAGGCTGCATTTCCAATCTATTTC...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFRPSQI*IIFCHS
Trigger: AGAATGGCAGAAGATGATCCATATTTGGGAAGGCCT...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRRPSQI*IIFCHS
Trigger: AGAATGGCAGAAGATGATCCATATTTGGGAAGGCCT...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGAACAATAACCTTTGCTaGTCCCACATAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSENNNLC*SHIVAD
Trigger: ATCTGCAACTATGTGGGACCAGCAAAGGTTATTGTT...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAAACAATAACCTTTGCTaGTCCCACATAGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGANNNLC*SHIVAD
Trigger: ATCTGCAACTATGTGGGACCAGCAAAGGTTATTGTT...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCTTTACTGTCATAGATaGCGTCTGATACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLLYCHR*RLIPRV
Trigger: AACCCGTGGTATCAGACGCCATCTATGACAGTAAAG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATTCAAGTTGGATGCATTaGGGGCTTTACTGTCATAGA +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDSSWMH*GLYCHR
Trigger: TCTATGACAGTAAAGCCCCCAATGCATCCAACTTGA...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEVEERF*FTSFQV
Trigger: GACTTGGAAACTAGTGAACCAAAACCTTTCCTCTAC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGGCTATTGCTCATCATaGCTAGATGAATGGCATTCA +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRGYCSS*LDEWHS
Trigger: TGAATGCCATTCATCTAGCCATGATGAGCAATAGCC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATCAGATGTAAACTCTaGCTCATATGGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVIRCKL*LIWFPI
Trigger: AATGGGAAACCATATGAGCCAGAGTTTACATCTGAT...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCATCAGATGTAAACTCTaGCTCATATGGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGIRCKL*LIWFPI
Trigger: AATGGGAAACCATATGAGCCAGAGTTTACATCTGAT...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGCAAAATGATGCTGTaGTCAGAAGGAATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLCKMML*SEGMPG
Trigger: ACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTGCAAAATGATGCTGTaGTCAGAAGGAATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVCKMML*SEGMPG
Trigger: ACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAAAAGAAGGATCCAAATaGAACATTTGTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQKEGSK*NICSGL
Trigger: AAGGCCTGAACAAATGTTTCATTTGGATCCTTCTTT...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000652619.1
CDS-3UTR TCA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAAAAGAAGGATCCAAATaGAACATTTGTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAKEGSK*NICSGL
Trigger: AAGGCCTGAACAAATGTTTCATTTGGATCCTTCTTT...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652619.1
CDS-3UTR TCA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATGGATGTCATCTTTCTaGACTTTGTCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEWMSSF*TLSQRR
Trigger: TCTTCTTTGTGACAAAGTTCAGAAAGATGACATCCA...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652619.1
CDS-3UTR TCA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATAAGAGGTATTTGCTCTaGATATTGAAAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDKRYLL*ILKRWQ
Trigger: CTGCCACCTTTTCAATATTCAGAGCAAATACCTCTT...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGTCCAGCAGTTACAGTaGAGATCCCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQVQQLQ*RSHPHS
Trigger: ACTGTGAGGATGGGATCTGCACTGTAACTGCTGGAC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTAAAAGGGCATTGGCATaGCTCTTTGCAAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIKRALA*LFASCI
Trigger: TATGCAGCTTGCAAAGAGGCATGCCAATGCCCTTTT...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTCCACCACATCTTCCTaGTTAGTGATCACTGCCAAG +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQASTTSS*LVITAK
Trigger: CTTGGCAGTGATCACTAAGCAGGAAGATGTGGTGGA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGTCGCTAATCCCATGTaGCTCTCAGCTACTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQVANPM*LSATVN
Trigger: GTTGACAGTAGCTGAGAGGCACATGGGATTAGCGAC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS-3UTR GCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGAGCACAGTCCATTCATaGCCAGGGAAGTGTGAACAT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQASTVHS*PGKCEH
Trigger: ATGTTCACACTTCCCTGGGCATGAATGGACTGTGCT...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGTGGCAGTGCCATCTGTaGTTGAAATACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTWQCHL*LKYFWI
Trigger: AATCCAGAAGTATTTCAACCACAGATGGCACTGCCA...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTTACAATTTTCAAGTTaGATGCATTGGGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAELQFSS*MHWGLY
Trigger: GTAAAGCCCCCAATGCATCCAACTTGAAAATTGTAA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCCTTGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCAGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPCASKSSDVNSGSYGFPDFLRS*TNTEAG
Trigger: ACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATC...TGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACAAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRVEERF*FTSFQV
Trigger: GACTTGGAAACTAGTGAACCAAAACCTTTCCTCTAC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGATCAGATGTAAACTCTaGCTCATATGGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: GQKECQVATVIPLMTIGTIRCKL*LIWFPI
Trigger: AATGGGAAACCATATGAGCCAGAGTTTACATCTGAT...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTTGTGGACAACGCAGTaGAATTTTAGGGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLLWTTQ*NFRALV
Trigger: AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTGAAAGTGAGAAATCATaGTGCTCCTACCAAGTAGTA +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFESEKS*CSYQVV
Trigger: TACTACTTGGTAGGAGCACCATGATTTCTCACTTTC...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGTTGCTCTAATATTTaGAGGTATGGGCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAGCSNI*RYGPSA
Trigger: AGCAGATGGCCCATACCTTCAAATATTAGAGCAACC...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226574.9
CDS-3UTR TCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTCCATTTGTGACCAACTaGACAATAACCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIPFVTN*TITFAG
Trigger: ACCAGCAAAGGTTATTGTTCAGTTGGTCACAAATGG...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGAAAGGAAGCCAAGTTaGAAAGGTCTCGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: SASVLWTTQWNFRALVYTERKPS*KGLELN
Trigger: ATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTC...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCAAGAGAGCTACAAATaGAGTGATGTGGGATTTCAA +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLQESYK*SDVGFQ
Trigger: TTGAAATCCCACATCACTTCATTTGTAGCTCTCTTG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR GCA 90 bp CAGGAATTTCTAGTAACTTATACAGCTGCAGCTTCACATCTTCAGCCAGCTGTTCGCCTCTGTCATTCGTaGTTCCAGTGTTTCAAATAC +
Preference number: 4 (lower is better)
Translates to: QEFLVTYTAAASHLQPAVRLCHS*FQCFKY
Trigger: GTATTTGAAACACTGGAAGCACGAATGACAGAGGCG...AACAGCTGGCTGAAGATGTGAAGCTGCAGCTGTATAAGTTACTAGAAATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCCTCCCAGCTGCTATATaGAGGGGTGTGGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTLPAAI*RGVVPS
Trigger: CGATGGAACCACACCCCTGCATATAGCAGCTGGGAG...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTAACCTCATCCCCAGATaGATCCGCTCAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSNLIPR*IRSASV
Trigger: AACACTGGCTGAGCGGATGCATCTGGGGATGAGGTT...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTTACAATTTTCAAGTTaGATGCATTGGGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFLQFSS*MHWGLY
Trigger: GTAAAGCCCCCAATGCATCCAACTTGAAAATTGTAA...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGTAGAGGAAAGGTTTTaGTTCACTAGTTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLVEERF*FTSFQV
Trigger: GACTTGGAAACTAGTGAACCAAAACCTTTCCTCTAC...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGAATTTTAGGGCTTTaGTTTACACGGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIGILGL*FTRCGK
Trigger: TTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCC...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGAGTTCAGAGGGCTTTaGAGCAGAAGAGGTATTTGC +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQEFRGL*SRRGIC
Trigger: GCAAATACCTCTTCTGCTCCAAAGCCCTCTGAACTC...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR TCA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTAAAGAAGGATCCAAATaGAACATTTGTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LDALQLLSCGQRSGILGLKEGSK*NICSGL
Trigger: AAGGCCTGAACAAATGTTTCATTTGGATCCTTCTTT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR GCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGAATATGTCAAATACCTaGCAGCTGGTGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQANMSNT*QLVAIS
Trigger: AGATATGGCCACCAGCTGGCAGGTATTTGACATATT...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTGGCAGTGCCATCTGTaGTTGAAATACTTCTGGATT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAWQCHL*LKYFWI
Trigger: AATCCAGAAGTATTTCAACCACAGATGGCACTGCCA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CCA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTTACAATTTTCAAGTTaGATGCATTGGGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: CTSASVLWTTQWNFRALVLQFSS*MHWGLY
Trigger: GTAAAGCCCCCAATGCATCCAACTTGAAAATTGTAA...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCGATTTCCTCCGAAGCTaGACAAACACAGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLDFLRS*TNTEAG
Trigger: ACCAGCCTCTGTGTTTGTCCAGCTTCGGAGGAAATC...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGAAGTGCAAGGGCGTCTaGTACAGATCATTTCTCATG +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQKCKGV*YRSFLM
Trigger: CATGAGAAATGATCTGTACCAGACGCCCTTGCACTT...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTCAGCTTCTGTCTTGTaGACAACGCAGTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQASASVL*TTQWNF
Trigger: AAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGTGCAAAATGATGCTGTaGTCAGAAGGAATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQCKMML*SEGMPG
Trigger: ACCTGGCATTCCTTCTGACCACAGCATCATTTTGCA...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
3UTR CAA 72 bp TTGGGGTGGTCAAGAAGTAGTGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACTTTATCATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGWSRSSAAFLC*SKILRTLSCPS
Trigger: AGAAGGACATGATAAAGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACTACTTCTTGACCACCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQASAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp CATCCCAGCATTAGATTTAGTAGTTCCAGGATGGAAAGTAATCCCACCATAAGTAATATGTCAAATACCTaGCAGCTGGTGGCCATATCT +
Preference number: 4 (lower is better)
Translates to: HPSIRFSSSRMESNPTISNMSNT*QLVAIS
Trigger: AGATATGGCCACCAGCTGGCAGGTATTTGACATATT...ACTTATGGTGGGATTACTTTCCATCCTGGAACTACTAAATCTAATGCTGGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652569.1
CDS-3UTR GCA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCGCCATCTGTTGGCAGTaGCATCTGTGGTTGAAATAC +
Preference number: 4 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLAICWQ*HLWLKY
Trigger: GTATTTCAACCACAGATGGCACTGCCAACAGATGGC...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTTTACAATTTTCAAGTTaGATGCATTGGGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LWTTQWNFRALVYTVWEILQFSS*MHWGLY
Trigger: GTAAAGCCCCCAATGCATCCAACTTGAAAATTGTAA...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTAGTCGAAAAGGGCATTaGCATGCCTCTTTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSSRKGH*HASLQA
Trigger: AGCTTGCAAAGAGGCATGCCAATGCCCTTTTCGACT...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR TCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGAGTGCCATCTGTGGTTaGAATACTTCTGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQASAICG*NTSGLN
Trigger: ATTTAATCCAGAAGTATTTCAACCACAGATGGCACT...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR TCA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTGGATGTCATCTTTCTaGACTTTGTCACAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAWMSSF*TLSQRR
Trigger: TCTTCTTTGTGACAAAGTTCAGAAAGATGACATCCA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652619.1
CDS-3UTR TCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCCCGAAAAATTGGGCATaGGCTTCTGACGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTPKNWA*ASDVSS
Trigger: AGAGGAAACGTCAGAAGCTCATGCCCAATTTTTCGG...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR GCA 90 bp TCTCCTTGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCAAGTGCTGCCTTTTTGTaGTTGAGTAAGATACTGAGA +
Preference number: 4 (lower is better)
Translates to: SPCASKSSDVNSGSYGFPSAAFL*LSKILR
Trigger: TCTCAGTATCTTACTCAAGCACAAAAAGGCAGCACT...TGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACAAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 72 bp AAGTGCAAGGGCGTCTGGTACAGATCATTTCTCATGTaGATAATGTCATCAGAAATCAAACCAGATGTGACT +
Preference number: 4 (lower is better)
Translates to: KCKGVWYRSFLM*IMSSEIKPDVT
Trigger: AGTCACATCTGGTTTGATTTCTGATGACATTATCAACATGAGAAATGATCTGTACCAGACGCCCTTGCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTTATCATGTCCTTCTTTaGCAGCTAGGTGCAAAACAG +
Preference number: 4 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSYHVLL*QLGAKQ
Trigger: CTGTTTTGCACCTAGCTGCCAAAGAAGGACATGATA...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CCA 90 bp TCTCCTTGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCAATCAGATGTAAACTCTaGCTCATATGGTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: SPCASKSSDVNSGSYGFPIRCKL*LIWFPI
Trigger: AATGGGAAACCATATGAGCCAGAGTTTACATCTGAT...TGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACAAGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
3UTR CAA 72 bp TTCCCAAAGAGGTTTACAGTGTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCCTTTTTAGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: FPKRFTVFLSSL*SQPSGSFLDSV
Trigger: CACTGAATCTAAAAAGGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAACACTGTAAACCTCTTTGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652569.1
CDS-3UTR CCA 90 bp TGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: CASKSSDVNSGSYGFPFNRPSQI*IIFCHS
Trigger: AGAATGGCAGAAGATGATCCATATTTGGGAAGGCCT...ATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652619.1
CDS-3UTR TCA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCAAATCAAACCAGATGTaGCTTCTAGTAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTKSNQM*LLVDPS
Trigger: TGAGGGATCTACTAGAAGTCACATCTGGTTTGATTT...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS CCA 90 bp TGTTCCTTCCGGGTGGCGAGTCCGCGTTCGGCCTCCTGGCGCGGGTaGGCTCTCCCTCCTAAGCGGCGCGGGCCTGCCGGCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: CSFRVASPRSASWRG*ALPPKRRGPAGWRR
Trigger: CCTTCTCCAGCCGGCAGGCCCGCGCCGCTTAGGAGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGGACTCGCCACCCGGAAGGAACA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS CCA 90 bp AGGACGTTGTGTTCCTTCCGGGTGGCGAGTCCGCGTTCGGCCTCCTaGCGCGGGTGGGCTCTCCCTCCTAAGCGGCGCGGGCCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: RTLCSFRVASPRSAS*RGWALPPKRRGPAG
Trigger: GCCGGCAGGCCCGCGCCGCTTAGGAGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGGACTCGCCACCCGGAAGGAACACAACGTCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS CCA 90 bp GGGAAGGGCAGGGGAAGCTGTCAGCGCGTCGCCGGGCCGCTCCGGTaGCGAAACCTCCTCTTCCTGCCCCGGCTCGCTGGTGCACTTCTC +
Preference number: 5 (lower is better)
Translates to: GKGRGSCQRVAGPLR*RNLLFLPRLAGALL
Trigger: GAGAAGTGCACCAGCGAGCCGGGGCAGGAAGAGGAGGTTTCGCCACCGGAGCGGCCCGGCGACGCGCTGACAGCTTCCCCTGCCCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394820.8
CDS TCA 90 bp GTAAGAGTTCCCCTCCGGTTCGCGTTCCCGCCCCGCGGAGGGACGTaGAGAGAAATGACCGCCGGGCGGCCGCGGCCCTTCGGCCGACTA +
Preference number: 5 (lower is better)
Translates to: VRVPLRFAFPPRGGT*REMTAGRPRPFGRL
Trigger: TAGTCGGCCGAAGGGCCGCGGCCGCCCGGCGGTCATTTCTCTTCACGTCCCTCCGCGGGGCGGGAACGCGAACCGGAGGGGAACTCTTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS GCA 90 bp AGAAATGACCGCCGGGCGGCCGCGGCCCTTCGGCCGACTAGCCCCTaGGAGGTCCGGATGTGTCTTTCCCCGCTGTCGCTAATCCCATGT +
Preference number: 5 (lower is better)
Translates to: RNDRRAAAALRPTSP*EVRMCLSPLSLIPC
Trigger: ACATGGGATTAGCGACAGCGGGGAAAGACACATCCGGACCTCGCAGGGGCTAGTCGGCCGAAGGGCCGCGGCCGCCCGGCGGTCATTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS GCA 90 bp CTGCGAGGTCCGGATGTGTCTTTCCCCGCTGTCGCTAATCCCATGTaGCTCTCAGCTACTGTCAACCTCCTCCCACGGTCTAGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: LRGPDVSFPAVANPM*LSATVNLLPRSSPA
Trigger: CGCTGGGCTAGACCGTGGGAGGAGGTTGACAGTAGCTGAGAGGCACATGGGATTAGCGACAGCGGGGAAAGACACATCCGGACCTCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS CCA 90 bp CGCACCACGCTGAGGTCCATCTCCTTGGTCTGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCCCGATCTCCCAGCTGCCGGTCCCCT +
Preference number: 5 (lower is better)
Translates to: RTTLRSISLVCCRAA*RISSFSRSPSCRSP
Trigger: AGGGGACCGGCAGCTGGGAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACATTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTFGVAH*SQGLHQ
Trigger: CTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAA...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGCACAGCAGTGAGATGGCGCTGGACGGCCAGCAGCATCTTCACTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ILILHSSEMALDGQQHLHSELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...GTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCTGTGCAGGATGAGAAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp GGTTTGCGAAGCCGACCACCATGTCCTTGGGTCCAGCAGTTACAGTaGAGATCCCATCCTCACAGTGTTTTCCCACCAGGCTGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: GLRSRPPCPWVQQLQ*RSHPHSVFPPGCGH
Trigger: ATGCCCACAGCCTGGTGGGAAAACACTGTGAGGATGGGATCTGCACTGTAACTGCTGGACCCAAGGACATGGTGGTCGGCTTCGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000507079.5
ENST00000509165.1
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp GTAAACATGAGCCGCACCACGCTGAGGTCCATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATTAGCTCTTTTTCCCGATCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: VNMSRTTLRSISLVC*RAAWRISSFSRSPS
Trigger: GCTGGGAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCATGTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp GCTGTAAACATGAGCCGCACCACGCTGAGGTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGGATTAGCTCTTTTTCCCGATCTCCC +
Preference number: 5 (lower is better)
Translates to: AVNMSRTTLRSISLV*CRAAWRISSFSRSP
Trigger: GGGAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCATGTTTACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp GTAAACATGAGCCGCACCACGCTGAGGTCCATCTCCTTGGTCTGCTaGAGAGCTGCTTGGCGGATTAGCTCTTTTTCCCGATCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: VNMSRTTLRSISLVC*RAAWRISSFSRSRA
Trigger: GGCCCTAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCATGTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS CCA 90 bp CGCACCACGCTGAGGTCCATCTCCTTGGTCTGCTGCAGAGCTGCTTaGCGGATTAGCTCTTTTTCCCGATCTAGGGCCATACAGCACAGT +
Preference number: 5 (lower is better)
Translates to: RTTLRSISLVCCRAA*RISSFSRSRAIQHS
Trigger: ACTGTGCTGTATGGCCCTAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACTTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNFGVAH*SQGLHQ
Trigger: CTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAA...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCSELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: QAGRLSEHLWMHFSFCLVSVKLS*RKDVST
Trigger: CGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGA...CACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp GCTGTAAACATGAGCCGCACCACGCTGAGGTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGGATTAGCTCTTTTTCCCGATCTAGG +
Preference number: 5 (lower is better)
Translates to: AVNMSRTTLRSISLV*CRAAWRISSFSRSR
Trigger: CCTAGATCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCATGTTTACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACCCTCCACCTTCTGCTaGCAAATAGGCAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSPSTFC*QIGKVR
Trigger: CCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGG...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCATTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNAFGVAH*SQGLHQ
Trigger: CTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAA...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCACTGGGCTGGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SLGWRLPGSLQLLRCSPFSELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCCAGCCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGAGTTACCCAAGCGGTCCAGAAGGCTCAGGTCGGCCCCAGCCCTCAGCAAATCTCATGGGGCATTTTGTaGAGAGTTAGCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: RVTQAVQKAQVGPSPQQISWGIL*RVSSEA
Trigger: TGCCTCACTGCTAACTCTCAACAAAATGCCCCATGA...GATTTGCTGAGGGCTGGGGCCGACCTGAGCCTTCTGGACCGCTTGGGTAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGGTATGGGCCATCTGTaGGCAGTGCCATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNGMGHL*AVPSVV
Trigger: AACCACAGATGGCACTGCCAACAGATGGCCCATACC...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTATTCCAAGAGCTGCTaGGGCACAGGGAGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCYSKSC*GTGSEL
Trigger: GAGCTCACTCCCTGTGCCCAAGCAGCTCTTGGAATA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCCCTCCACCTTCTGCTaGCAAATAGGCAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCPSTFC*QIGKVR
Trigger: CCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGCTGAGGTCCATCTCCTaGGTCTGCTGCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVLRSIS*VCCRAA
Trigger: AGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAG...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCGTCTATTTGCTGCCTaGTGGAGGCAGGCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SNLIPRCIRSASVVIARYRLFAA*WRQARE
Trigger: CTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCTATTGCTCATCATGGCTAGATGAATGGCATTCAGACCGTCCCCGTTGGGGTGGTATGGGCCATCTGTaGGCAGTGCCATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: GYCSSWLDEWHSDRPRWGGMGHL*AVPSVV
Trigger: AACCACAGATGGCACTGCCAACAGATGGCCCATACC...ACCCCAACGGGGACGGTCTGAATGCCATTCATCTAGCCATGATGAGCAATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCCGACCACCATGTCCTaGGGTCCAGCAGTTACAGTG +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEPTTMS*GPAVTV
Trigger: CACTGTAACTGCTGGACCCAAGGACATGGTGGTCGG...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTGAAGTATACCCAGGTTaGCGAAGCCGACCACCATGT +
Preference number: 5 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCEVYPG*RSRPPC
Trigger: ACATGGTGGTCGGCTTCGCAAACCTGGGTATACTTC...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTGAAGTATACCCAGGTTaGCGAAGCCGACCACCATGT +
Preference number: 5 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLEVYPG*RSRPPC
Trigger: ACATGGTGGTCGGCTTCGCAAACCTGGGTATACTTC...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCCCTCCACCTTCTGCTaGCAAATAGGCAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHPSTFC*QIGKVR
Trigger: CCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGG...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCCCCTCCACCTTCTGCTaGCAAATAGGCAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCPSTFC*QIGKVR
Trigger: CCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGG...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACTGAGGTCCATCTCCTaGGTCTGCTGCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVELRSIS*VCCRAA
Trigger: AGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAGGGCGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: GGCLDHFNCFGVAHLSQGAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...GCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGCCAGGTGCAGTGCTGTGCGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: GSLPMRCCRAPQPGAVLCAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...GCACAGCACTGCACCTGGCTGTGGAGCACGACAACATCTCATTGGCAGGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CATTTTCCCAAGAGTCATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGTTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: HFPKSHPGHREAQSSPPGFGVAH*SQGLHQ
Trigger: CTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAA...CCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGATGACTCTTGGGAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAEFGVAH*SQGLHQ
Trigger: CTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSESELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACGGTATGGGCCATCTGTaGGCAGTGCCATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SNLIPRCIRSASVVIARYGMGHL*AVPSVV
Trigger: AACCACAGATGGCACTGCCAACAGATGGCCCATACC...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGCCGACCACCATGTCCTaGGGTCCAGCAGTTACAGTG +
Preference number: 5 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRPTTMS*GPAVTV
Trigger: CACTGTAACTGCTGGACCCAAGGACATGGTGGTCGG...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATCTGAGGTCCATCTCCTaGGTCTGCTGCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNLRSIS*VCCRAA
Trigger: AGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAG...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GCATCACCCTCCAGGAGCAGGCAGCCTGCCAATGAGATGTTGTCGTGCTCCACAGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: ASPSRSRQPANEMLSCSTEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...TGTGGAGCACGACAACATCTCATTGGCAGGCTGCCTGCTCCTGGAGGGTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTTCGGTGTAGCCCATTaGTCTCAGGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFFGVAH*SQGLHQ
Trigger: CTGGTGGAGGCCCTGAGACAAATGGGCTACACCGAA...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCACCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSPGSLQ*LRCSPF
Trigger: AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGG...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTCGGAGCTCGTCTATTaGCTGCCTTGTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRSELVY*LPCGGR
Trigger: CCTGCCTCCACAAGGCAGCAAATAGACGAGCTCCGA...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSVKLS*RKDVST
Trigger: CGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGGTATGGGCCATCTGTaGGCAGTGCCATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEGMGHL*AVPSVV
Trigger: AACCACAGATGGCACTGCCAACAGATGGCCCATACC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp CTAGGCACCAGCTGTATTGAGAAGTGTGCAAATTATTCCAAGAGCTaGTTGGGCACAGGGAGTGAGCTCATTCCACAGTGCCAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: LGTSCIEKCANYSKS*LGTGSELIPQCQAD
Trigger: GTCTGCTTGGCACTGTGGAATGAGCTCACTCCCTGTGCCCAAGCAGCTCTTGGAATAATTTGCACACTTCTCAATACAGCTGGTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp ATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATATGGGCCATCTGCTGTaGGCAGTGCCATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: MLWSEGMPGGDRDTFNDNMGHLL*AVPSVV
Trigger: AACCACAGATGGCACTGCCAACAGCAGATGGCCCAT...ATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226574.9
CDS-3UTR CAA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTCCGACCACCATGTCCTaGGGTCCAGCAGTTACAGTG +
Preference number: 5 (lower is better)
Translates to: LDALQLLSCGQRSGILGLPTTMS*GPAVTV
Trigger: CACTGTAACTGCTGGACCCAAGGACATGGTGGTCGG...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCCGACCACCATGTCCTaGGGTCCAGCAGTTACAGTG +
Preference number: 5 (lower is better)
Translates to: SASVLWTTQWNFRALVYTPTTMS*GPAVTV
Trigger: CACTGTAACTGCTGGACCCAAGGACATGGTGGTCGG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGGAAGTATACCCAGGTTaGCGAAGCCGACCACCATGT +
Preference number: 5 (lower is better)
Translates to: GQKECQVATVIPLMTIGTEVYPG*RSRPPC
Trigger: ACATGGTGGTCGGCTTCGCAAACCTGGGTATACTTC...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCTGAGGTCCATCTCCTaGGTCTGCTGCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SASVLWTTQWNFRALVYTLRSIS*VCCRAA
Trigger: AGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AATATGTCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: NMSNTCQLVAISRGVVPGAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...GCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGACATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: RAGSLSTFGCTSASVLWTAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...TGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGCCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQPGSLQ*LRCSPF
Trigger: AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGG...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGCGTCTATTTGCTGCCTaGTGGAGGCAGGCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SASVLWTTQWNFRALVYTRLFAA*WRQARE
Trigger: CTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACG...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTCGTCTATTTGCTGCCTaGTGGAGGCAGGCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: CTSASVLWTTQWNFRALVRLFAA*WRQARE
Trigger: CTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACG...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAATCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQSVKLS*RKDVST
Trigger: CGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGA...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQSVKLS*RKDVST
Trigger: CGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGA...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: MIQAGRLSEHLWMHFSFCWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...ACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCCCGCCTGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGAAGTATACCCAGGTTaGCGAAGCCGACCACCATGT +
Preference number: 5 (lower is better)
Translates to: QLLSCGQRSGILGLWFTREVYPG*RSRPPC
Trigger: ACATGGTGGTCGGCTTCGCAAACCTGGGTATACTTC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNLSCPS*AARCKT
Trigger: TGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAA...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGAGGCTGCCTGGATCACTTCAATTGCTTCGGTGTAGCCCATTTGTCTCAGGGCTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: GGCLDHFNCFGVAHLSQGLSCPS*AARCKT
Trigger: TGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAA...GCCCTGAGACAAATGGGCTACACCGAAGCAATTGAAGTGATCCAGGCAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GTAAAGCTGAGTTTGCGGAAGGATGTCTCCACGCCGCTGTCGCAGACACTGTCAGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: VKLSLRKDVSTPLSQTLSAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...TGACAGTGTCTGCGACAGCGGCGTGGAGACATCCTTCCGCAAACTCAGCTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATCCAGGTCATAGAGAGGCTCAAAGTTCTCCACCAGGGGATCTGCTCCTGCTGCAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 5 (lower is better)
Translates to: IQVIERLKVLHQGICSCCSSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...GCAGCAGGAGCAGATCCCCTGGTGGAGAACTTTGAGCCTCTCTATGACCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGTCATGGGGCATTTTGTaGAGAGTTAGCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SLSTFGCTSASVLWTTQWSWGIL*RVSSEA
Trigger: TGCCTCACTGCTAACTCTCAACAAAATGCCCCATGA...CCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTCATGGGGCATTTTGTaGAGAGTTAGCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHSWGIL*RVSSEA
Trigger: TGCCTCACTGCTAACTCTCAACAAAATGCCCCATGA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACAAAACGGGAAATAGATaGGAAATGCAGCCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHKTGNR*EMQPEA
Trigger: GGCCTCAGGCTGCATTTCCAATCTATTTCCCGTTTT...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp TCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCTGCCAGCTGGTGGCCGAAGTATACCCAGGTTaGCGAAGCCGACCACCATGT +
Preference number: 5 (lower is better)
Translates to: SGSYGFPFNMSNTCQLVAEVYPG*RSRPPC
Trigger: ACATGGTGGTCGGCTTCGCAAACCTGGGTATACTTC...GGCCACCAGCTGGCAGGTATTTGACATATTAAATGGGAAACCATATGAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCCGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACCTTACAATTTTCAAGTaGGATGCATTGGGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: GRLSEHLWMHFSFCLVDNLTIFK*DALGAL
Trigger: TAAAGCCCCCAATGCATCCAACTTGAAAATTGTAAG...GTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGGCAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTCAGCACTCTCTTCTTTaGTTCCTGTTGCATACGTTA +
Preference number: 5 (lower is better)
Translates to: LAKLSKQPHPQMHPLSQCQHSLL*FLLHTL
Trigger: TAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTG...ACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTCAGCACTCTCTTCTTTaGTTCCTGTTGCATACGTTA +
Preference number: 5 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLQHSLL*FLLHTL
Trigger: TAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTG...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: GSLSTFGCTSASVLWTTQAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...CTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVELSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGTTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: GMPGGDRDTFNDNRNVAELSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...CTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGTTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGLSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAACCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVEPGSLQ*LRCSPF
Trigger: AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGG...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQPGSLQ*LRCSPF
Trigger: AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: SASVLWTTQWNFRALVYTSVKLS*RKDVST
Trigger: CGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGA...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTCGGTAAAGCTGAGTTaGCGGAAGGATGTCTCCACG +
Preference number: 5 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLSVKLS*RKDVST
Trigger: CGTGGAGACATCCTTCCGCAAACTCAGCTTTACCGA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGTCATGGGGCATTTTGTaGAGAGTTAGCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSESWGIL*RVSSEA
Trigger: TGCCTCACTGCTAACTCTCAACAAAATGCCCCATGA...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: KRSRVKSRMIQAGRLSEHWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...GTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: GQKECQVATVIPLMTIGTTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAAAGAGTTCAGAGGGCTTaGGAGCAGAAGAGGTATTTG +
Preference number: 5 (lower is better)
Translates to: SEHLWMHFSFCLVDNAVERVQRA*EQKRYL
Trigger: CAAATACCTCTTCTGCTCCAAAGCCCTCTGAACTCT...TTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp CGGCTCTCTGAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCACTTACAATTTTCAAGTaGGATGCATTGGGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: RLSEHLWMHFSFCLVDNALTIFK*DALGAL
Trigger: TAAAGCCCCCAATGCATCCAACTTGAAAATTGTAAG...TGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTCAGAGAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAAATACCTGCCAGCTGGTGGCCATATCTAGAGGCGTGGTTCCAGGCACAACTCTTACAATTTTCAAGTaGGATGCATTGGGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: SNTCQLVAISRGVVPGTTLTIFK*DALGAL
Trigger: TAAAGCCCCCAATGCATCCAACTTGAAAATTGTAAG...AGTTGTGCCTGGAACCACGCCTCTAGATATGGCCACCAGCTGGCAGGTATTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCCAGCACTCTCTTCTTTaGTTCCTGTTGCATACGTTA +
Preference number: 5 (lower is better)
Translates to: LSKQPHPQMHPLSQCCDCQHSLL*FLLHTL
Trigger: TAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTG...GCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: SNLIPRCIRSASVVIARYLSCPS*AARCKT
Trigger: TGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAA...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: SNLIPRCIRSASVVIARYAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAAAGCTTAGTAAGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 5 (lower is better)
Translates to: QSLVSNLIPRCIRSASVVSSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...CACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCTTACTAAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTTGAATGCAAAATGATGCTGTGGTCAGAAGGAATGCCAGGTGGCGACCGTGATTTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: FECKMMLWSEGMPGGDRDLSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...ATCACGGTCGCCACCTGGCATTCCTTCTGACCACAGCATCATTTTGCATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGCGTCTATTTGCTGCCTaGTGGAGGCAGGCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQRLFAA*WRQARE
Trigger: CTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACG...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGCACCTTATCCAAATGAAACATTaGTTCAGGCCTTCCCAAATA +
Preference number: 5 (lower is better)
Translates to: RSRVKSRMIQAGRLSEHLIQMKH*FRPSQI
Trigger: TATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT...AAGGTGCTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACCTTACAATTTTCAAGTaGGATGCATTGGGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: SNLIPRCIRSASVVIARYLTIFK*DALGAL
Trigger: TAAAGCCCCCAATGCATCCAACTTGAAAATTGTAAG...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSEEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCAGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: GGDRDTFNDNRNVAEGQQFLSSL*SQPSGS
Trigger: GGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAA...CTGTTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCAGGCTAAATTTTGCCTTCTAGAGGTCCTTCCTGCCCATAATCATGGGGCATTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QQAKFCLLEVLPAHNHGAFLSSL*SQPSGS
Trigger: GGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAA...TGCCCCATGATTATGGGCAGGAAGGACCTCTAGAAGGCAAAATTTAGCCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCTGGGCTCCTGATCTaGCTCTGTGGTTTCAATAAC +
Preference number: 5 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIAGLLI*LCGFNN
Trigger: GTTATTGAAACCACAGAGCAAGATCAGGAGCCCAGC...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGCAGCACTCTCTTCTTTaGTTCCTGTTGCATACGTTA +
Preference number: 5 (lower is better)
Translates to: GQKECQVATVIPLMTIGTQHSLL*FLLHTL
Trigger: TAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTG...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAACAGCACTCTCTTCTTTaGTTCCTGTTGCATACGTTA +
Preference number: 5 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQQHSLL*FLLHTL
Trigger: TAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTG...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGGCTGCCTTTTTGTGCTaGAGTAAGATACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: GQKECQVATVIPLMTIGTAAFLC*SKILRT
Trigger: AGTTCTCAGTATCTTACTCAAGCACAAAAAGGCAGC...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGTAGCAGAGGGACAAAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 5 (lower is better)
Translates to: PGGDRDTFNDNRNVAEGQSSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...TTGTCCCTCTGCTACGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAGAGTAGCCCAGTTTTaGTCTGGATCAGGAATTTCT +
Preference number: 5 (lower is better)
Translates to: LSCGQRSGILGLWFTRCGRVAQF*SGSGIS
Trigger: AGAAATTCCTGATCCAGACAAAAACTGGGCTACTCT...CCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGAGAGTAGCCCAGTTTTaGTCTGGATCAGGAATTTCT +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSERVAQF*SGSGIS
Trigger: AGAAATTCCTGATCCAGACAAAAACTGGGCTACTCT...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GGTCAGAAGGAATGCCAGGTGGCGACCGTGATACCTTTAATGACAATAGGAACGAGAGTAGCCCAGTTTTaGTCTGGATCAGGAATTTCT +
Preference number: 5 (lower is better)
Translates to: GQKECQVATVIPLMTIGTRVAQF*SGSGIS
Trigger: AGAAATTCCTGATCCAGACAAAAACTGGGCTACTCT...CGTTCCTATTGTCATTAAAGGTATCACGGTCGCCACCTGGCATTCCTTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGTTGTCCATAAGTGTTTaGGAAGGAGCAGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: SASVLWTTQWNFRALVYTLSISV*EGAGLS
Trigger: GCTGAGTCCTGCTCCTTCCAAAACACTTATGGACAA...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGCCTGGATCACTTCAATaGCTTCGGTGTAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLPGSLQ*LRCSPF
Trigger: AAATGGGCTACACCGAAGCAATTGAAGTGATCCAGG...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTCATGGGGCATTTTGTaGAGAGTTAGCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LDALQLLSCGQRSGILGLSWGIL*RVSSEA
Trigger: TGCCTCACTGCTAACTCTCAACAAAATGCCCCATGA...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTACTTCAGCTTCTGTCTaGTGGACAACGCAGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LDALQLLSCGQRSGILGLTSASV*WTTQWN
Trigger: ATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGT...AAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGGGCCGGCTCTCTGAGTGTGATGGAATGGAATaGAATAACCCTACTAGGCAC +
Preference number: 5 (lower is better)
Translates to: LKRSRVKSRMIQAGRLSECDGME*NNPTRH
Trigger: GTGCCTAGTAGGGTTATTCAATTCCATTCCATCACA...CTCAGAGAGCCGGCCCGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS TCA 90 bp TGTGATGGAATGGAATTGAATAACCCTACTAGGCACCAGCTGTATTaGGAAGTGTGCAAATTATTCCAAGAGCTGCTTGGGCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: CDGMELNNPTRHQLY*EVCKLFQELLGHRE
Trigger: CTCCCTGTGCCCAAGCAGCTCTTGGAATAATTTGCACACTTCTCAATACAGCTGGTGCCTAGTAGGGTTATTCAATTCCATTCCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS-3UTR CAA 90 bp AGCAACCTCATCCCCAGATGCATCCGCTCAGCCAGTGTTGTGATTGCTAGATACATCCAAATGAAACATTaGTTCAGGCCTTCCCAAATA +
Preference number: 5 (lower is better)
Translates to: SNLIPRCIRSASVVIARYIQMKH*FRPSQI
Trigger: TATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT...GTATCTAGCAATCACAACACTGGCTGAGCGGATGCATCTGGGGATGAGGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CAA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTCCGACCACCATGTCCTaGGGTCCAGCAGTTACAGTG +
Preference number: 5 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSPTTMS*GPAVTV
Trigger: CACTGTAACTGCTGGACCCAAGGACATGGTGGTCGG...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTCGTCTATTTGCTGCCTaGTGGAGGCAGGCGAGAGAG +
Preference number: 5 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSRLFAA*WRQARE
Trigger: CTCTCTCGCCTGCCTCCACAAGGCAGCAAATAGACG...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCCTGAGGTCCATCTCCTaGGTCTGCTGCAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTLRSIS*VCCRAA
Trigger: AGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAG...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp GAGCACCTTTGGATGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTCTTACAATTTTCAAGTaGGATGCATTGGGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: EHLWMHFSFCLVDNAVEFLTIFK*DALGAL
Trigger: TAAAGCCCCCAATGCATCCAACTTGAAAATTGTAAG...AAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCATCCAAAGGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLFLSSL*SQPSGS
Trigger: GGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: CTSASVLWTTQWNFRALVFLSSL*SQPSGS
Trigger: GGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAA...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLLSCPS*AARCKT
Trigger: TGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAA...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 5 (lower is better)
Translates to: CGQRSGILGLWFTRCGKLSSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...CAATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCACAAGTTTCAGACCGTCCCCGTaGGGGTGGTCAAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: IMSSEIKPDVTSSRSLTSFRPSP*GWSRSS
Trigger: ACTACTTCTTGACCACCCCAACGGGGACGGTCTGAA...ACTTGTGAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATCCTGCCAATGAGATGTaGTCGTGCTCCACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CASKSSDVNSGSYGFPFNPANEM*SCSTAR
Trigger: CCTGGCTGTGGAGCACGACAACATCTCATTGGCAGG...ATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGAGAGTAGCCCAGTTTTaGTCTGGATCAGGAATTTCT +
Preference number: 5 (lower is better)
Translates to: SASVLWTTQWNFRALVYTRVAQF*SGSGIS
Trigger: AGAAATTCCTGATCCAGACAAAAACTGGGCTACTCT...CGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTCATGGGGCATTTTGTaGAGAGTTAGCAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQASWGIL*RVSSEA
Trigger: TGCCTCACTGCTAACTCTCAACAAAATGCCCCATGA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGATCCAAATGAAACATTaGTTCAGGCCTTCCCAAATA +
Preference number: 5 (lower is better)
Translates to: QLLSCGQRSGILGLWFTRIQMKH*FRPSQI
Trigger: TATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT...CCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CAA 90 bp TCATCAGATGTAAACTCTGGCTCATATGGTTTCCCATTTAATATGTCAAATACCCCCTCCACCTTCTGCTaGCAAATAGGCAAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSDVNSGSYGFPFNMSNTPSTFC*QIGKVR
Trigger: CCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGG...GGTATTTGACATATTAAATGGGAAACCATATGAGCCAGAGTTTACATCTGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTGAAGACAATGGCAAATaGTCTATGAACATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIEDNGK*SMNICG
Trigger: CCCACAGATGTTCATAGACAATTTGCCATTGTCTTC...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTTACACGGTGTGGGAAATTTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LWTTQWNFRALVYTVWEIFLSSL*SQPSGS
Trigger: GGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAA...AATTTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTGGAATTTTAGGGCTTaGGTTTACACGGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAWNFRA*VYTVWE
Trigger: TTCCCACACCGTGTAAACCAAAGCCCTAAAATTCCA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp TGCACTTCAGCTTCTGTCTTGTGGACAACGCAGTGGAATTTTAGGGCTTTGGTTATCCAAATGAAACATTaGTTCAGGCCTTCCCAAATA +
Preference number: 5 (lower is better)
Translates to: CTSASVLWTTQWNFRALVIQMKH*FRPSQI
Trigger: TATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT...AACCAAAGCCCTAAAATTCCACTGCGTTGTCCACAAGACAGAAGCTGAAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000652619.1
CDS-3UTR CAA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGTTTTTGTCATCACTTTaGTCACAACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAFLSSL*SQPSGS
Trigger: GGACCCTGAAGGTTGTGACAAAAGTGATGACAAAAA...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp AGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGGCGCAGCACTCTCTTCTTTaGTTCCTGTTGCATACGTTA +
Preference number: 5 (lower is better)
Translates to: RKEAKLKRSRVKSRMIQAQHSLL*FLLHTL
Trigger: TAACGTATGCAACAGGAACAAAAGAAGAGAGTGCTG...CGCCTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS TCA 90 bp ACATTTGTTCAGGCCTTCCCAAATATGGATCATCTTCTGCCATTCTaGAGCTGGTGGTTCTTTTCATATCTCCAAGATATGCTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: TFVQAFPNMDHLLPF*SWWFFSYLQDMLLS
Trigger: AGACAGAAGCATATCTTGGAGATATGAAAAGAACCACCAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQLSCPS*AARCKT
Trigger: TGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAA...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp CCAAGAAAGGAAGCCAAGTTGAAAAGGTCTCGAGTTAAATCGAGAATGATTCAGAGTAGTGCTGCCTTTTaGTGCTTGAGTAAGATACTG +
Preference number: 5 (lower is better)
Translates to: PRKEAKLKRSRVKSRMIQSSAAF*CLSKIL
Trigger: CAGTATCTTACTCAAGCACAAAAAGGCAGCACTACT...CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGGCTTCCTTTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 90 bp CAAATGAAACATTTGTTCAGGCCTTCCCAAATATGGATCATCTTCTaGCATTCTGAAGCTGGTGGTTCTTTTCATATCTCCAAGATATGC +
Preference number: 5 (lower is better)
Translates to: QMKHLFRPSQIWIIF*HSEAGGSFHISKIC
Trigger: GCATATCTTGGAGATATGAAAAGAACCACCAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATGTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS-3UTR CAA 90 bp TCTCCTTGTGCTAGTAAATCATCAGATGTAAACTCTGGCTCATATGGTTTCCCACTTACAATTTTCAAGTaGGATGCATTGGGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: SPCASKSSDVNSGSYGFPLTIFK*DALGAL
Trigger: TAAAGCCCCCAATGCATCCAACTTGAAAATTGTAAG...TGGGAAACCATATGAGCCAGAGTTTACATCTGATGATTTACTAGCACAAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS-3UTR CAA 90 bp ATGTTGATAATGTCATCAGAAATCAAACCAGATGTGACTTCTAGTAGATCCCTCTTATCATGTCCTTCTTaGGCAGCTAGGTGCAAAACA +
Preference number: 5 (lower is better)
Translates to: MLIMSSEIKPDVTSSRSLLSCPS*AARCKT
Trigger: TGTTTTGCACCTAGCTGCCAAAGAAGGACATGATAA...GAGGGATCTACTAGAAGTCACATCTGGTTTGATTTCTGATGACATTATCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652569.1
ENST00000652619.1
CDS CCA 72 bp GCCGGTGGCTGCGTGCAGGCCGAGGGCTGCGGCGGCTaGCGGCCCGACCGACGGGAAGGGCAGGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: AGGCVQAEGCGG*RPDRREGQGKL
Trigger: CAGCTTCCCCTGCCCTTCCCGTCGGTCGGGCCGCCAGCCGCCGCAGCCCTCGGCCTGCACGCAGCCACCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000652619.1
CDS CCA 72 bp CGGGTGGCGAGTCCGCGTTCGGCCTCCTGGCGCGGGTaGGCTCTCCCTCCTAAGCGGCGCGGGCCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: RVASPRSASWRG*ALPPKRRGPAG
Trigger: GCCGGCAGGCCCGCGCCGCTTAGGAGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGGACTCGCCACCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS TCA 72 bp CCCCTCCGGTTCGCGTTCCCGCCCCGCGGAGGGACGTaGAGAGAAATGACCGCCGGGCGGCCGCGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PLRFAFPPRGGT*REMTAGRPRPF
Trigger: GAAGGGCCGCGGCCGCCCGGCGGTCATTTCTCTTCACGTCCCTCCGCGGGGCGGGAACGCGAACCGGAGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS CCA 72 bp TGTTCCTTCCGGGTGGCGAGTCCGCGTTCGGCCTCCTaGCGCGGGTGGGCTCTCCCTCCTAAGCGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: CSFRVASPRSAS*RGWALPPKRRG
Trigger: CCCGCGCCGCTTAGGAGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGGACTCGCCACCCGGAAGGAACA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS CCA 72 bp AGGGGAAGCTGTCAGCGCGTCGCCGGGCCGCTCCGGTaGCGAAACCTCCTCTTCCTGCCCCGGCTCGCTGGT +
Preference number: 6 (lower is better)
Translates to: RGSCQRVAGPLR*RNLLFLPRLAG
Trigger: ACCAGCGAGCCGGGGCAGGAAGAGGAGGTTTCGCCACCGGAGCGGCCCGGCGACGCGCTGACAGCTTCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS GCA 72 bp TCGCCGGGCCGCTCCGGTGGCGAAACCTCCTCTTCCTaGCCCGGCTCGCTGGTGCACTTCTCTCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SPGRSGGETSSS*PGSLVHFSLFL
Trigger: CAGAAAGAGAGAGAAGTGCACCAGCGAGCCGGGGCAGGAAGAGGAGGTTTCGCCACCGGAGCGGCCCGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394820.8
CDS CCA 72 bp GAATGTAGTGTGGAATGCCAGAGAGCACGGAATGGCTaGACCACAGCCTCGCAGCACAGGCGAGGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: ECSVECQRARNG*TTASQHRRGGG
Trigger: TCCCCCTCCTCGCCTGTGCTGCGAGGCTGTGGTCCAGCCATTCCGTGCTCTCTGGCATTCCACACTACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS GCA 72 bp TTCCCGATCTCCCAGCTGCCGGTCCCCTCCACCTTCTaGTTGCAAATAGGCAAGGTCAGGGTGCACCAAGAG +
Preference number: 6 (lower is better)
Translates to: FPISQLPVPSTF*LQIGKVRVHQE
Trigger: CTCTTGGTGCACCCTGACCTTGCCTATTTGCAAGCAGAAGGTGGAGGGGACCGGCAGCTGGGAGATCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 72 bp GTGGCGAAACCTCCTCTTCCTGCCCCGGCTCGCTGGTaGACTTCTCTCTCTTTCTGTCTCGCTCACTCTCTC +
Preference number: 6 (lower is better)
Translates to: VAKPPLPAPARW*TSLSFCLAHSL
Trigger: GAGAGAGTGAGCGAGACAGAAAGAGAGAGAAGTGCACCAGCGAGCCGGGGCAGGAAGAGGAGGTTTCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394820.8
CDS TCA 72 bp GGATGCATTGGGGGCTTTACTGTCATAGATGGCGTCTaGTACCACGGGTTCCAGGCGCCTTGTGAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GCIGGFTVIDGV*YHGFQAPCEAA
Trigger: GGCAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGACGCCATCTATGACAGTAAAGCCCCCAATGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000508584.1
ENST00000510638.1
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 72 bp ATGAGCCGCACCACGCTGAGGTCCATCTCCTTGGTCTaGTGCAGAGCTGCTTGGCGGATTAGCTCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: MSRTTLRSISLV*CRAAWRISSFS
Trigger: GGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000508584.1
ENST00000510638.1
ENST00000513803.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS CCA 72 bp GTATACCCAGGTTTGCGAAGCCGACCACCATGTCCTTaGGTCCAGCAGTTACAGTGCAGATCCCATCCTCAC +
Preference number: 6 (lower is better)
Translates to: VYPGLRSRPPCP*VQQLQCRSHPH
Trigger: GTGAGGATGGGATCTGCACTGTAACTGCTGGACCCAAGGACATGGTGGTCGGCTTCGCAAACCTGGGTATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000507079.5
ENST00000509165.1
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 72 bp CATTTGTTCAGGCCTTCCCAAATATGGATCATCTTCTaGCATTCTGAAGCCGGGTGGCGAGTCCGCGTTCGG +
Preference number: 6 (lower is better)
Translates to: HLFRPSQIWIIF*HSEAGWRVRVR
Trigger: CCGAACGCGGACTCGCCACCCGGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS GCA 72 bp CATTTGTTCAGGCCTTCCCAAATATGGATCATCTTCTaGCATTCTGAAGCTCTCTCCTCCGCGCCGCAGCGC +
Preference number: 6 (lower is better)
Translates to: HLFRPSQIWIIF*HSEALSSAPQR
Trigger: GCGCTGCGGCGCGGAGGAGAGAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS CAA 72 bp AGTATACCCAGGTTTGCGAAGCCGACCACCATGTCCTaGGGTCCAGCAGTTACAGTGCAGATCCCATCCTCA +
Preference number: 6 (lower is better)
Translates to: SIPRFAKPTTMS*GPAVTVQIPSS
Trigger: TGAGGATGGGATCTGCACTGTAACTGCTGGACCCAAGGACATGGTGGTCGGCTTCGCAAACCTGGGTATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000507079.5
ENST00000509165.1
ENST00000510638.1
ENST00000513803.5
ENST00000652569.1
ENST00000652619.1
CDS CAA 90 bp AGAAAAGCTGTAAACATGAGCCGCACCACGCTGAGGTCCATCTCCTaGGTCTGCTGCAGAGCTGCTTGGCGGATTAGCTCTTTTTCCCGA +
Preference number: 6 (lower is better)
Translates to: RKAVNMSRTTLRSIS*VCCRAAWRISSFSR
Trigger: TCGGGAAAAAGAGCTAATCCGCCAAGCAGCTCTGCAGCAGACCAAGGAGATGGACCTCAGCGTGGTGCGGCTCATGTTTACAGCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000226574.9
ENST00000394820.8
ENST00000505458.5
ENST00000508584.1
ENST00000510638.1
ENST00000513803.5
ENST00000600343.5
ENST00000652569.1
ENST00000652619.1
CDS GCA 72 bp AAGAATGTGCCAAGGCAGGAAAGTGAGAAATCATGGTaGTCCTACCAAGTAGTAGACTTTGACCTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: KNVPRQESEKSW*SYQVVDFDLKG
Trigger: CCCCTTCAGGTCAAAGTCTACTACTTGGTAGGAGCACCATGATTTCTCACTTTCCTGCCTTGGCACATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS GCA 72 bp TTTCCCGATCTAGGGCCATACAGCACAGTCCATTCATaGCCAGGGAAGTGTGAACATTTAAAAGACCATGCT +
Preference number: 6 (lower is better)
Translates to: FPDLGPYSTVHS*PGKCEHLKDHA
Trigger: AGCATGGTCTTTTAAATGTTCACACTTCCCTGGGCATGAATGGACTGTGCTGTATGGCCCTAGATCGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS CCA 72 bp ATCCAAATGAAACATTTGTTCAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCTGAAGCCGGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: IQMKHLFRPSQI*IIFCHSEAGWR
Trigger: TCGCCACCCGGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226574.9
ENST00000394820.8
CDS TCA 72 bp AAACGAAATCCTCTCTGTTTAGGTTGCTCTAATATTTaGAGGTATGGGCCATCTGCTGTTGGCAGTGCCATC +
Preference number: 6 (lower is better)
Translates to: KRNPLCLGCSNI*RYGPSAVGSAI
Trigger: GATGGCACTGCCAACAGCAGATGGCCCATACCTTCAAATATTAGAGCAACCTAAACAGAGAGGATTTCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226574.9
ENST00000507079.5
ENST00000509165.1
CDS CCA 72 bp GGAAATAGATTGGAAATGCAGCCTGAGGCCAGCTCTTaGGAGATCCAAAAAGCCAACTTACAGAATTTGGAT +
Preference number: 6 (lower is better)
Translates to: GNRLEMQPEASS*EIQKANLQNLD
Trigger: ATCCAAATTCTGTAAGTTGGCTTTTTGGATCTCCCAAGAGCTGGCCTCAGGCTGCATTTCCAATCTATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS CCA 72 bp AGAAAGAATGTGCCAAGGCAGGAAAGTGAGAAATCATaGTGCTCCTACCAAGTAGTAGACTTTGACCTGAAG +
Preference number: 6 (lower is better)
Translates to: RKNVPRQESEKS*CSYQVVDFDLK
Trigger: CTTCAGGTCAAAGTCTACTACTTGGTAGGAGCACCATGATTTCTCACTTTCCTGCCTTGGCACATTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS TCA 72 bp AAACGAAATCCTCTCTGTTTAGGTTGCTCTAATATTTaGAGGTATGGGCCATCTGTTGGCAGTGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: KRNPLCLGCSNI*RYGPSVGSAIC
Trigger: ACAGATGGCACTGCCAACAGATGGCCCATACCTTCAAATATTAGAGCAACCTAAACAGAGAGGATTTCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394820.8
ENST00000505458.5
ENST00000511926.5
ENST00000652569.1
ENST00000652619.1
CDS TCA 72 bp CAGGCCTTCCCAAATATGGATCATCTTCTGCCATTCTaGAGCTGGTGGTTCTTTTCATATCTCCAAGATATG +
Preference number: 6 (lower is better)
Translates to: QAFPNMDHLLPF*SWWFFSYLQDM
Trigger: CATATCTTGGAGATATGAAAAGAACCACCAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS TCA 72 bp ATGGAATTGAATAACCCTACTAGGCACCAGCTGTATTaGGAAGTGTGCAAATTATTCCAAGAGCTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: MELNNPTRHQLY*EVCKLFQELLG
Trigger: CCCAAGCAGCTCTTGGAATAATTTGCACACTTCTCAATACAGCTGGTGCCTAGTAGGGTTATTCAATTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS GCA 72 bp CATTTGTTCAGGCCTTCCCAAATATGGATCATCTTCTaGCATTCTGAAGCTGGTGGTTCTTTTCATATCTCC +
Preference number: 6 (lower is better)
Translates to: HLFRPSQIWIIF*HSEAGGSFHIS
Trigger: GGAGATATGAAAAGAACCACCAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507079.5
ENST00000511926.5
ENST00000652619.1
CDS CCA 72 bp ATCCAAATGAAACATTTGTTCAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCTGAAGCTCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: IQMKHLFRPSQI*IIFCHSEALSS
Trigger: GGAGGAGAGAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505458.5
CDS TCA 72 bp GTTCAGAGGGCTTTGGAGCAGAAGAGGTATTTGCTCTaGATATTGAAAAGGTGGCAGAATTTGAACACATTC +
Preference number: 6 (lower is better)
Translates to: VQRALEQKRYLL*ILKRWQNLNTF
Trigger: GAATGTGTTCAAATTCTGCCACCTTTTCAATATTCAGAGCAAATACCTCTTCTGCTCCAAAGCCCTCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600343.5
CDS CCA 72 bp ATCCAAATGAAACATTTGTTCAGGCCTTCCCAAATATaGATCATCTTCTGCCATTCTGAAGCTTCTTTAAAA +
Preference number: 6 (lower is better)
Translates to: IQMKHLFRPSQI*IIFCHSEASLK
Trigger: TTTTAAAGAAGCTTCAGAATGGCAGAAGATGATCCATATTTGGGAAGGCCTGAACAAATGTTTCATTTGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509165.1
CDS TCA 72 bp ACATACATAACGGAAACGAAATCCTCTCTGCAAAGGTaGACGTTAAGCCAATTAAGTTTGAGAAATACTTAT +
Preference number: 6 (lower is better)
Translates to: TYITETKSSLQR*TLSQLSLRNTY
Trigger: ATAAGTATTTCTCAAACTTAATTGGCTTAACGTTCACCTTTGCAGAGAGGATTTCGTTTCCGTTATGTATGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502367.1