RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFIC (Homo sapiens)

Ensembl gene IDs: ENSG00000141905

Ensembl transcript IDs: ENST00000341919.7, ENST00000395111.7, ENST00000443272.3, ENST00000586919.5, ENST00000588839.1, ENST00000589123.5, ENST00000589164.1, ENST00000589537.1, ENST00000589969.1, ENST00000590282.5, ENST00000641145.1

Found 1284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCGGGGAGAGGTGGCCTTGCTGGGTGTCGCGCCTGTCGGCCCTaGGCACAGGCTCCAGGCTGTGCTCACCTGGTCTCCGGACAGAGC +
Preference number: 1 (lower is better)
Translates to: GPGRGGLAGCRACRP*AQAPGCAHLVSGQS
Trigger: GCTCTGTCCGGAGACCAGGTGAGCACAGCCTGGAGCCTGTGCCCAGGGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp AGGGTGGCGTCCAGCCCAGGACTCTGGGCCCCCGGGTGTGGGCTGTaGAGGGACGCGATGGTCCCAATAGTGATGGGGCCACCCACTCCC +
Preference number: 1 (lower is better)
Translates to: RVASSPGLWAPGCGL*RDAMVPIVMGPPTP
Trigger: GGGAGTGGGTGGCCCCATCACTATTGGGACCATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGACGCCACCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp GCTGCGGGTGGAGTGGCCACCCCATGGTTGGAGGACAGCCTGCAGTaGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGAC +
Preference number: 1 (lower is better)
Translates to: AAGGVATPWLEDSLQ*VGEWCLGAGPWPRD
Trigger: GTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCACTCCACCCGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp GTCTGGCTGCGGGTGGAGTGGCCACCCCATGGTTGGAGGACAGCCTaGAGTGGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTA +
Preference number: 1 (lower is better)
Translates to: VWLRVEWPPHGWRTA*SGSVNGVWGPARGL
Trigger: TAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCACTCCACCCGCAGCCAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp GGTGAGAAGGGTGGCGTCCAGCCCAGGACTCTGGGCCCCCGGGTGTaGGCTGTGCAGGGACGCGATGGTCCCAATAGTGATGGGGCCACC +
Preference number: 1 (lower is better)
Translates to: GEKGGVQPRTLGPRV*AVQGRDGPNSDGAT
Trigger: GGTGGCCCCATCACTATTGGGACCATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGACGCCACCCTTCTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp GGAGGCAAGCTCGGGGTGAGAAGGGTGGCGTCCAGCCCAGGACTCTaGGCCCCCGGGTGTGGGCTGTGCAGGGACGCGATGGTCCCAATA +
Preference number: 1 (lower is better)
Translates to: GGKLGVRRVASSPGL*APGCGLCRDAMVPI
Trigger: TATTGGGACCATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGACGCCACCCTTCTCACCCCGAGCTTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp AAGACAACAGCATGCTCAGCCACCGGACCACAGCCTGTGACTCGGTaGCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: KTTACSATGPQPVTR*HLAVPVPCRTLGWA
Trigger: GGCCCAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGGTGGCTGAGCATGCTGTTGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp CCCCATGGTTGGAGGACAGCCTGCAGTGGGTCGGTGAATGGTGTCTaGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGAGAGCCC +
Preference number: 1 (lower is better)
Translates to: PHGWRTACSGSVNGV*GPARGLGTNQRGEP
Trigger: GGGCTCTCCTCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp GTGGCCACCCCATGGTTGGAGGACAGCCTGCAGTGGGTCGGTGAATaGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: VATPWLEDSLQWVGE*CLGAGPWPRDQSER
Trigger: CCTCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp GGGGTGGAGGGGGCGAGGAACAGGGAGATAGAGCCAGGGATAGTCTaGCATGCATGTGTGTCAGCGCCGCCAGCTGACCTCGGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: GVEGARNREIEPGIV*HACVSAPPADLGSQ
Trigger: CTGGCTCCCGAGGTCAGCTGGCGGCGCTGACACACATGCATGGCAGACTATCCCTGGCTCTATCTCCCTGTTCCTCGCCCCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp CCGAGGACAGACGGACGGAGGGACCAAGGGCTCGAGGCCAGAGGATaGCGAACCTCTCTTGGGGGTGATGGGGGAGGGTCCTGGGTCTTT +
Preference number: 1 (lower is better)
Translates to: PRTDGRRDQGLEARG*RTSLGGDGGGSWVF
Trigger: AAAGACCCAGGACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATCCTCTGGCCTCGAGCCCTTGGTCCCTCCGTCCGTCTGTCCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp GACAGCCTGCAGTGGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTaGCCTAGGGACCAATCAGAGAGGAGAGCCCTTTCCCAGGGCCAA +
Preference number: 1 (lower is better)
Translates to: DSLQWVGEWCLGAGP*PRDQSERRALSQGQ
Trigger: TTGGCCCTGGGAAAGGGCTCTCCTCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 90 bp TCAAGGACAAGACAACAGCATGCTCAGCCACCGGACCACAGCCTGTaGCTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCG +
Preference number: 1 (lower is better)
Translates to: SRTRQQHAQPPDHSL*LGATWLSLCPAGPS
Trigger: CGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGGTGGCTGAGCATGCTGTTGTCTTGTCCTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 90 bp CAATTGCATAGAGACTTCTCCTCCCAAACGGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGACAGCGAGTCGGCCGGCGCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: QLHRDFSSQTGGREG*KSPQRDSESAGALG
Trigger: TCCCAAAGCGCCGGCCGACTCGCTGTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCCCGTTTGGGAGGAGAAGTCTCTATGCAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CAAGTCCTGCTGGTACTGCTTTGGGTCCGCCTCCTCACCTTGCCCTaGCGGGAGGTCAAGGGTGGTGGACTGACCCCACACTCTGTACCA +
Preference number: 1 (lower is better)
Translates to: QVLLVLLWVRLLTLP*REVKGGGLTPHSVP
Trigger: TGGTACAGAGTGTGGGGTCAGTCCACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp GGGAGCTCTGGGTGTCCGGGCTCCCCCATCCCCTTCCTCGGAAAGTaGATTTCTTACAGTGTGTGCAATGTGGGTCCCTCCCTTTGGGGG +
Preference number: 1 (lower is better)
Translates to: GSSGCPGSPIPFLGK*ISYSVCNVGPSLWG
Trigger: CCCCCAAAGGGAGGGACCCACATTGCACACACTGTAAGAAATGCACTTTCCGAGGAAGGGGATGGGGGAGCCCGGACACCCAGAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CCTCCTCTCCCCAGTCAAATAGGGCTGGGTCTTCCTACTCCTCCATaGCCCATCTCCACCCGGGTCATTGTCAGGTGCCCCCACGGAATG +
Preference number: 1 (lower is better)
Translates to: PPLPSQIGLGLPTPP*PISTRVIVRCPHGM
Trigger: CATTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGATGGGGCATGGAGGAGTAGGAAGACCCAGCCCTATTTGACTGGGGAGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp ACATGCTGCCTGGTATGGGCTTTTGCCTGCTGTACTCAGCCAAGGTaGCAAGTGAGCCAAGGAGGCAAGCTCGGGGTGAGAAGGGTGGCG +
Preference number: 1 (lower is better)
Translates to: TCCLVWAFACCTQPR*QVSQGGKLGVRRVA
Trigger: CGCCACCCTTCTCACCCCGAGCTTGCCTCCTTGGCTCACTTGGCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp AGCCCGGGCTCTCTGGCCAATGCATATTACTTAAGGGCAATGTCGTaGCCAGCTGTGGTGGTCTGGGCTCTCCCTCTGTATCGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: SPGSLANAYYLRAMS*PAVVVWALPLYRLG
Trigger: CCCCAGGCGATACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACGACATTGCCCTTAAGTAATATGCATTGGCCAGAGAGCCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp AGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTaGGGCAGGGAAGGTGGAATTGTCTGCTGCCTGGGGACCTGCAGG +
Preference number: 1 (lower is better)
Translates to: SQVCLCLECCCLSRS*GREGGIVCCLGTCR
Trigger: CCTGCAGGTCCCCAGGCAGCAGACAATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CAAGGGACAGTGGGGTGCAGCCAAGTCTGTCTGTGCCTGGAATGCTaGTGTCTCTCAAGGTCCTGGGGCAGGGAAGGTGGAATTGTCTGC +
Preference number: 1 (lower is better)
Translates to: QGTVGCSQVCLCLEC*CLSRSWGREGGIVC
Trigger: GCAGACAATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCACCCCACTGTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp CTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGTCTGTCTGTGCCTaGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGGGAAGGTGGAA +
Preference number: 1 (lower is better)
Translates to: LSCKGQWGAAKSVCA*NAAVSQGPGAGKVE
Trigger: TTCCACCTTCCCTGCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCACCCCACTGTCCCTTGCAAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CAGGGACGCGATGGTCCCAATAGTGATGGGGCCACCCACTCCCTTTaGCTCCGGTTGCTCCTAGTTCCTTGGCAAGACAGATTTGCTCAG +
Preference number: 1 (lower is better)
Translates to: QGRDGPNSDGATHSL*LRLLLVPWQDRFAQ
Trigger: CTGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAACCGGAGGCAAAGGGAGTGGGTGGCCCCATCACTATTGGGACCATCGCGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp TTGCAAGGGACAGTGGGGTGCAGCCAAGTCTGTCTGTGCCTGGAATaGTGCTGTCTCTCAAGGTCCTGGGGCAGGGAAGGTGGAATTGTC +
Preference number: 1 (lower is better)
Translates to: LQGTVGCSQVCLCLE*CCLSRSWGREGGIV
Trigger: GACAATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCACCCCACTGTCCCTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTaGAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGG +
Preference number: 1 (lower is better)
Translates to: QLLLAPEPVLQGTVG*SQVCLCLECCCLSR
Trigger: CCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CTCAGGAAGTGTCTGACGTGGCAGAAATGGGGCAAGATGGGAGGATaGGGAGGAAGCTGGATTGAGAGATGTATGTCCCAGCGCCCTCCA +
Preference number: 1 (lower is better)
Translates to: LRKCLTWQKWGKMGG*GGSWIERCMSQRPP
Trigger: TGGAGGGCGCTGGGACATACATCTCTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAGACACTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CACTGCTTGGGAAAAGTCTGTTTTGGTATCACTGGCAACAAGTCCTaGTGGTACTGCTTTGGGTCCGCCTCCTCACCTTGCCCTGCCGGG +
Preference number: 1 (lower is better)
Translates to: HCLGKVCFGITGNKS*WYCFGSASSPCPAG
Trigger: CCCGGCAGGGCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCAAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp TGCTTGGGAAAAGTCTGTTTTGGTATCACTGGCAACAAGTCCTGCTaGTACTGCTTTGGGTCCGCCTCCTCACCTTGCCCTGCCGGGAGG +
Preference number: 1 (lower is better)
Translates to: CLGKVCFGITGNKSC*YCFGSASSPCPAGR
Trigger: CCTCCCGGCAGGGCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp AGCTACATGAATGCTGTGCACAGCCAGCCCGGGCTCTCTGGCCAATaGATATTACTTAAGGGCAATGTCGTGGCCAGCTGTGGTGGTCTG +
Preference number: 1 (lower is better)
Translates to: SYMNAVHSQPGLSGQ*ILLKGNVVASCGGL
Trigger: CAGACCACCACAGCTGGCCACGACATTGCCCTTAAGTAATATGCATTGGCCAGAGAGCCCGGGCTGGCTGTGCACAGCATTCATGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp TCCACCCGGGTCATTGTCAGGTGCCCCCACGGAATGGGGACAATTTaGATATATTTGGGAGGCCTCCCTATTCTTTCCCACAGCATGGGC +
Preference number: 1 (lower is better)
Translates to: STRVIVRCPHGMGTI*IYLGGLPILSHSMG
Trigger: GCCCATGCTGTGGGAAAGAATAGGGAGGCCTCCCAAATATATGCAAATTGTCCCCATTCCGTGGGGGCACCTGACAATGACCCGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp AGGGAGGCGGGGAGAACTAAACCATCCACAACATGCTGCCTGGTATaGGCTTTTGCCTGCTGTACTCAGCCAAGGTGCCAAGTGAGCCAA +
Preference number: 1 (lower is better)
Translates to: REAGRTKPSTTCCLV*AFACCTQPRCQVSQ
Trigger: TTGGCTCACTTGGCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTTAGTTCTCCCCGCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp CATGCCCCATCTCCACCCGGGTCATTGTCAGGTGCCCCCACGGAATaGGGACAATTTGCATATATTTGGGAGGCCTCCCTATTCTTTCCC +
Preference number: 1 (lower is better)
Translates to: HAPSPPGSLSGAPTE*GQFAYIWEASLFFP
Trigger: GGGAAAGAATAGGGAGGCCTCCCAAATATATGCAAATTGTCCCCATTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGATGGGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 90 bp ATGGGCAGCGGTGTCATTTTGAAGGTGAGACTCTCAGGAAGTGTCTaGCGTGGCAGAAATGGGGCAAGATGGGAGGATGCGGAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: MGSGVILKVRLSGSV*RGRNGARWEDAEEA
Trigger: AGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAGACACTTCCTGAGAGTCTCACCTTCAAAATGACACCGCTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp CCAAGAAACAGGGAGGCGGGGAGAACTAAACCATCCACAACATGCTaGCTGGTATGGGCTTTTGCCTGCTGTACTCAGCCAAGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: PRNREAGRTKPSTTC*LVWAFACCTQPRCQ
Trigger: TTGGCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTTAGTTCTCCCCGCCTCCCTGTTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 90 bp AGAACTAAACCATCCACAACATGCTGCCTGGTATGGGCTTTTGCCTaGTGTACTCAGCCAAGGTGCCAAGTGAGCCAAGGAGGCAAGCTC +
Preference number: 1 (lower is better)
Translates to: RTKPSTTCCLVWAFA*CTQPRCQVSQGGKL
Trigger: GAGCTTGCCTCCTTGGCTCACTTGGCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTTAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp GGTCAAGGGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATaGATGGGCAGCGGTGTCATTTTGAAGGTGAGACTCTCAGGAAGT +
Preference number: 1 (lower is better)
Translates to: GQGWWTDPTLCTIEQ*MGSGVILKVRLSGS
Trigger: ACTTCCTGAGAGTCTCACCTTCAAAATGACACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACCCTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp CAGACATGTGAGGCACTGCTTGGGAAAAGTCTGTTTTGGTATCACTaGCAACAAGTCCTGCTGGTACTGCTTTGGGTCCGCCTCCTCACC +
Preference number: 1 (lower is better)
Translates to: QTCEALLGKSLFWYH*QQVLLVLLWVRLLT
Trigger: GGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 90 bp GTGGCAGAAATGGGGCAAGATGGGAGGATGCGGAGGAAGCTGGATTaGGAGATGTATGTCCCAGCGCCCTCCAAAGAGAAAGTAAAATCC +
Preference number: 1 (lower is better)
Translates to: VAEMGQDGRMRRKLD*EMYVPAPSKEKVKS
Trigger: GGATTTTACTTTCTCTTTGGAGGGCGCTGGGACATACATCTCTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 90 bp CATTTTGAAGGTGAGACTCTCAGGAAGTGTCTGACGTGGCAGAAATaGGGCAAGATGGGAGGATGCGGAGGAAGCTGGATTGAGAGATGT +
Preference number: 1 (lower is better)
Translates to: HFEGETLRKCLTWQK*GKMGGCGGSWIERC
Trigger: ACATCTCTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAGACACTTCCTGAGAGTCTCACCTTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCTCTGCGGTCTCCGCTaGCCGGCCGGGGTCCGCTGT +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHLCGLR*PAGVRC
Trigger: ACAGCGGACCCCGGCCGGGCAGCGGAGACCGCAGAG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACTGCACGTCCCGCAGCTaGGCCCCGCGTCGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHCTSRS*APRRGR
Trigger: CCTACCCCGACGCGGGGCCCAGCTGCGGGACGTGCA...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGGREG*KSPQRD
Trigger: GTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAGGREG*KSPQRD
Trigger: GTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGCGCCTGTCGGCCCTaGGCACAGGCTCCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHRACRP*AQAPGC
Trigger: ACAGCCTGGAGCCTGTGCCCAGGGCCGACAGGCGCG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGACCTGCCCTGGCTTTaGCCTGGGTCGGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERADLPWL*PGSGEG
Trigger: CCCCTCCCCCGACCCAGGCCAAAGCCAGGGCAGGTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGCCGGGGGCCGGCTGTaGTGCCCCCTGGGATTCCTG +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLAGGRL*CPLGFL
Trigger: CAGGAATCCCAGGGGGCAGCACAGCCGGCCCCCGGC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTCGCCTGCCCCACCCTaGCCGCCTCTGCGGTCTCCG +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLSPAPP*PPLRSP
Trigger: CGGAGACCGCAGAGGCGGGCAGGGTGGGGCAGGCGA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGAGAGGTGGCCTTGCTaGGTGTCGCGCCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHERWPC*VSRLSA
Trigger: GGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGAGAGGTGGCCTTGCTaGGTGTCGCGCCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAERWPC*VSRLSA
Trigger: GGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGTGGGTCCCTCCCTTTaGGGGTGTGAGCCGGGCGAG +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAVGPSL*GCEPGE
Trigger: CTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCAC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCGAGCGGGGACCGCTaGCGTCGGCCTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPSGDR*RRPPLS
Trigger: GGAGAGAGGAGGCCGACGCCAGCGGTCCCCGCTCGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACAGGACGCTTGCGAAGTaGCGCCCAGCTCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHRTLAK*RPALPL
Trigger: GAGGGGCAGAGCTGGGCGTCACTTCGCAAGCGTCCT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGTGACGCCCAGCTCTaGCCCTCGGGCCACGCAGGG +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLSDAQL*PSGHAG
Trigger: CCCTGCGTGGCCCGAGGGGCAGAGCTGGGCGTCACT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCAACTCGGGGAGCTCTaGGTGTCCGGGCTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHQLGEL*VSGLPH
Trigger: ATGGGGGAGCCCGGACACCCAGAGCTCCCCGAGTTG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCCTCCTCTCTCCTCTaGGGGCCCAGCCGTGATGCA +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHASSLL*GPSRDA
Trigger: TGCATCACGGCTGGGCCCCCAGAGGAGAGAGGAGGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCAGGCTGTGCTCACCTaGTCTCCGGACAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHQAVLT*SPDRAR
Trigger: CCTGGCTCTGTCCGGAGACCAGGTGAGCACAGCCTG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCGATGAGGGTTGACTaGAGGGGCTGGTGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHAMRVD*RGWWRG
Trigger: GCCTCTCCACCAGCCCCTCCAGTCAACCCTCATCGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACTGGGGGCCCAGCCGTaGTGCACGTCCCGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLGAQP*CTSRSW
Trigger: CCAGCTGCGGGACGTGCATCACGGCTGGGCCCCCAG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCACAGGCTCCAGGCTGTaGTCACCTGGTCTCCGGACA +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERATGSRL*SPGLRT
Trigger: TGTCCGGAGACCAGGTGAGCACAGCCTGGAGCCTGT...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCCAGTCCTGCGGCCTTaGCGTCCCGAGAGTTGGAAA +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAPVLRP*RPESWK
Trigger: TTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACCGAGCGGGGACCGCTaGCGTCGGCCTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRPSGDR*RRPPLS
Trigger: GGAGAGAGGAGGCCGACGCCAGCGGTCCCCGCTCGG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGACCTGCCCTGGCTTTaGCCTGGGTCGGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRDLPWL*PGSGEG
Trigger: CCCCTCCCCCGACCCAGGCCAAAGCCAGGGCAGGTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCACGACCCCCACCCTaGCTGAGAAGCTTCCGGACA +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPRPPP*LRSFRT
Trigger: TGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTCGTGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTTCCCAGGGCCAAGATaGGCCCCGGAGGTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLFPGPR*APEVCP
Trigger: AGGACAGACCTCCGGGGCCCATCTTGGCCCTGGGAA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCACAGTGTGTGCAATGTaGGTCCCTCCCTTTGGGGGT +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERATVCAM*VPPFGG
Trigger: ACCCCCAAAGGGAGGGACCCACATTGCACACACTGT...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCAAAACGCTTAGCAGATaGGAGGCCCCCTACACGGCT +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAKTLSR*EAPYTA
Trigger: AGCCGTGTAGGGGGCCTCCCATCTGCTAAGCGTTTT...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGGACAGCCAGGGGCTaGGTAGACCTGGGGGCAATT +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLRTARG*VDLGAI
Trigger: AATTGCCCCCAGGTCTACCCAGCCCCTGGCTGTCCT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAAGGACGCTTGCGAAGTaGCGCCCAGCTCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRTLAK*RPALPL
Trigger: GAGGGGCAGAGCTGGGCGTCACTTCGCAAGCGTCCT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGTTGGAGGACAGCCTaGAGTGGGTCGGTGAATGGT +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGWRTA*SGSVNG
Trigger: ACCATTCACCGACCCACTGCAGGCTGTCCTCCAACC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTGGCGTCCCGAGAGTTaGAAACGTTGCGTCTTTACC +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAWRPES*KRCVFT
Trigger: GGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGCCTGCATGAAAAGTaGGGAGCGGGGAGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLSLHEK*GAGSLA
Trigger: AGCCAGACTCCCCGCTCCCCACTTTTCATGCAGGCT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCTGGGGGCCCAGCCGTaGTGCACGTCCCGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLLGAQP*CTSRSW
Trigger: CCAGCTGCGGGACGTGCATCACGGCTGGGCCCCCAG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCTCTGCGGTCTCCGCTaGCCGGCCGGGGTCCGCTGT +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVLCGLR*PAGVRC
Trigger: ACAGCGGACCCCGGCCGGGCAGCGGAGACCGCAGAG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGACAGTGTGTGCAATGTaGGTCCCTCCCTTTGGGGGT +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLTVCAM*VPPFGG
Trigger: ACCCCCAAAGGGAGGGACCCACATTGCACACACTGT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCCGAGCGGGGACCGCTaGCGTCGGCCTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGPSGDR*RRPPLS
Trigger: GGAGAGAGGAGGCCGACGCCAGCGGTCCCCGCTCGG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCTCCTGAGGCTAGTTTaGGAGGAGAGTCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHLLRLV*EESLVF
Trigger: GAAAACCAGACTCTCCTCCCAAACTAGCCTCAGGAG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACCACGACCCCCACCCTaGCTGAGAAGCTTCCGGACA +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRPRPPP*LRSFRT
Trigger: TGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTCGTGG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGTTCTCGTCGCGCCCTaGCCCCTCTGGAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGVLVAP*PLWSPA
Trigger: AGCCGGGCTCCAGAGGGGTCAGGGCGCGACGAGAAC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCTCTGCGGTCTCCGCTaGCCGGCCGGGGTCCGCTGT +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGLCGLR*PAGVRC
Trigger: ACAGCGGACCCCGGCCGGGCAGCGGAGACCGCAGAG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTCGCCTGCCCCACCCTaGCCGCCTCTGCGGTCTCCG +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGSPAPP*PPLRSP
Trigger: CGGAGACCGCAGAGGCGGGCAGGGTGGGGCAGGCGA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGGGCCGGGGCCAATTaGATAGAGACTTCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGAGAN*IETSPP
Trigger: GGGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCCCTTCCTCGGAAAGTaGATTTCTTACAGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LPESGPRFDPQGPPGERAPFLGK*ISYSVC
Trigger: GCACACACTGTAAGAAATGCACTTTCCGAGGAAGGG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTGCACGTCCCGCAGCTaGGCCCCGCGTCGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGCTSRS*APRRGR
Trigger: CCTACCCCGACGCGGGGCCCAGCTGCGGGACGTGCA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGACCTGCCCTGGCTTTaGCCTGGGTCGGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGDLPWL*PGSGEG
Trigger: CCCCTCCCCCGACCCAGGCCAAAGCCAGGGCAGGTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTCCAGCCCAGGACTCTaGGCCCCCGGGTGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGSSPGL*APGCGL
Trigger: CAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp GACGGAGGGACCAAGGGCTCGAGGCCAGAGGATGGCGAACCTCTCTaGGGGGTGATGGGGGAGGGTCCTGGGTCTTTCTCTTTAGGAGCG +
Preference number: 2 (lower is better)
Translates to: DGGTKGSRPEDGEPL*GVMGEGPGSFSLGA
Trigger: CGCTCCTAAAGAGAAAGACCCAGGACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATCCTCTGGCCTCGAGCCCTTGGTCCCTCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGACCCCCACCCTGGCTaGGAAGCTTCCGGACACCCC +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVDPHPG*EASGHP
Trigger: GGGGTGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGACCCCCACCCTGGCTaGGAAGCTTCCGGACACCCC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQDPHPG*EASGHP
Trigger: GGGGTGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCGGACCACAGCCTGTaGCTCGGTGCCACCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPDHSL*LGATWL
Trigger: CAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCCGGGGGCCGGCTGTaGTGCCCCCTGGGATTCCTG +
Preference number: 2 (lower is better)
Translates to: PPECVRLCVLSFWPGWESAGGRL*CPLGFL
Trigger: CAGGAATCCCAGGGGGCAGCACAGCCGGCCCCCGGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGGGGAGAGGTGGCCTTaGTGGGTGTCGCGCCTGTCG +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVGERWP*WVSRLS
Trigger: CGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTACACGAGCAGAACATaGAGCTATGTGTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLYTSRT*SYVCAL
Trigger: CAGCGCACACACATAGCTGCATGTTCTGCTCGTGTA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCCGGGTGTGGGCTGTaGAGGGACGCGATGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPGCGL*RDAMVP
Trigger: TGGGACCATCGCGTCCCTGCACAGCCCACACCCGGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCCCGGGTGTGGGCTGTaGAGGGACGCGATGGTCCCA +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGPGCGL*RDAMVP
Trigger: TGGGACCATCGCGTCCCTGCACAGCCCACACCCGGG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGTGGGTCCCTCCCTTTaGGGGTGTGAGCCGGGCGAG +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLVGPSL*GCEPGE
Trigger: CTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCAC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCTCCTGAGGCTAGTTTaGGAGGAGAGTCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLLRLV*EESLVF
Trigger: GAAAACCAGACTCTCCTCCCAAACTAGCCTCAGGAG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCCAGGGTGGGGCCCTaGGGTCAGAACCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPRVGP*GQNLGS
Trigger: GGAACCCAGGTTCTGACCCCAGGGCCCCACCCTGGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAAGGGGGACCCAGGTCTaGCCCCTAAGCGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRGTQV*PLSGSP
Trigger: GGGAGAGCCGCTTAGGGGCCAGACCTGGGTCCCCCT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp TGGCAACAAGTCCTGCTGGTACTGCTTTGGGTCCGCCTCCTCACCTaGCCCTGCCGGGAGGTCAAGGGTGGTGGACTGACCCCACACTCT +
Preference number: 2 (lower is better)
Translates to: WQQVLLVLLWVRLLT*PCREVKGGGLTPHS
Trigger: AGAGTGTGGGGTCAGTCCACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAAGGACGCTTGCGAAGTaGCGCCCAGCTCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRTLAK*RPALPL
Trigger: GAGGGGCAGAGCTGGGCGTCACTTCGCAAGCGTCCT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGGGGCTGGAGGTGGTaGGGGCTGCAGGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRGWRW*GLQEWP
Trigger: AGGCCATTCCTGCAGCCCTCACCACCTCCAGCCCCT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PPECVRLCVLSFWPGWESGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTCGAGGGGCAGCAGGTaGCTGGGCCTCACTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLSRGSR*LGLTSS
Trigger: GGAGGAAGTGAGGCCCAGGCACCTGCTGCCCCTCGA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGAGAGGTGGCCTTGCTaGGTGTCGCGCCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGERWPC*VSRLSA
Trigger: GGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGTGGGTCCCTCCCTTTaGGGGTGTGAGCCGGGCGAG +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGVGPSL*GCEPGE
Trigger: CTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCAC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCAACTCGGGGAGCTCTaGGTGTCCGGGCTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGQLGEL*VSGLPH
Trigger: ATGGGGGAGCCCGGACACCCAGAGCTCCCCGAGTTG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGCCTCCTCTCTCCTCTaGGGGCCCAGCCGTGATGCA +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLASSLL*GPSRDA
Trigger: TGCATCACGGCTGGGCCCCCAGAGGAGAGAGGAGGC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGATGGGGGAGGGTCCTaGGTCTTTCTCTTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRDGGGS*VFLFRS
Trigger: GCTCCTAAAGAGAAAGACCCAGGACCCTCCCCCATC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCGTCGGGGTAGGCGATaGAAGTGCAAACGGCGGTCC +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRRGRR*KCKRRS
Trigger: GGACCGCCGTTTGCACTTTCATCGCCTACCCCGACG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCGTCGGGGTAGGCGATaGAAGTGCAAACGGCGGTCC +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLRRGRR*KCKRRS
Trigger: GGACCGCCGTTTGCACTTTCATCGCCTACCCCGACG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGAGGCTAGGAGCAGGTaGGACCCGGAGACCTGCCCT +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGEARSR*DPETCP
Trigger: AGGGCAGGTCTCCGGGTCTCACCTGCTCCTAGCCTC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGAGAGGGGGTGCCTCTaGGGTGGGTGTGGAACAGCA +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGERGCL*GGCGTA
Trigger: TGCTGTTCCACACCCACCTCAGAGGCACCCCCTCTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTCGAGGGGCAGCAGGTaGCTGGGCCTCACTTCCTCC +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGSRGSR*LGLTSS
Trigger: GGAGGAAGTGAGGCCCAGGCACCTGCTGCCCCTCGA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGAGTCTGGCTGCGGGTaGAGTGGCCACCCCATGGTT +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVESGCG*SGHPMV
Trigger: AACCATGGGGTGGCCACTCCACCCGCAGCCAGACTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGAGTCTGGCTGCGGGTaGAGTGGCCACCCCATGGTT +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQESGCG*SGHPMV
Trigger: AACCATGGGGTGGCCACTCCACCCGCAGCCAGACTC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACGTGGCCAGCTGTGGTaGTCTGGGCTCTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRGQLW*SGLSLC
Trigger: ACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCGTGGCCAGCTGTGGTaGTCTGGGCTCTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRGQLW*SGLSLC
Trigger: ACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATGTCGTGGCCAGCTGTaGTGGTCTGGGCTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQCRGQL*WSGLSL
Trigger: GAGGGAGAGCCCAGACCACCACAGCTGGCCACGACA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGAATTGTCTGCTGCCTaGGGACCTGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQELSAA*GPAGGP
Trigger: GGGTCCCCCTGCAGGTCCCCAGGCAGCAGACAATTC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGAATTGTCTGCTGCCTaGGGACCTGCAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGELSAA*GPAGGP
Trigger: GGGTCCCCCTGCAGGTCCCCAGGCAGCAGACAATTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGTATGCCAGCCTGCATaGAAAGTGGGGAGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVVCQPA*KVGSGE
Trigger: CTCCCCGCTCCCCACTTTTCATGCAGGCTGGCATAC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGCCAAGGTGCCAAGTaGGCCAAGGAGGCAAGCTCG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGSQGAK*AKEASS
Trigger: CGAGCTTGCCTCCTTGGCTCACTTGGCACCTTGGCT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: ALASRELETLRLYLLSSCGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTCCTCCCTGCCTGGCTaGCCCACTAACCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVSSLPG*PTNHLA
Trigger: AGCCAGATGGTTAGTGGGGCAGCCAGGCAGGGAGGA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTCCTCCCTGCCTGGCTaGCCCACTAACCATCTGGCT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGSSLPG*PTNHLA
Trigger: AGCCAGATGGTTAGTGGGGCAGCCAGGCAGGGAGGA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCGGGTCATTGTCAGGTaGCCCCACGGAATGGGGACA +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRVIVR*PHGMGT
Trigger: TGTCCCCATTCCGTGGGGGCACCTGACAATGACCCG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: PPECVRLCVLSFWPGWESFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCAGTCCTGCGGCCTTaGCGTCCCGAGAGTTGGAAA +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPVLRP*RPESWK
Trigger: TTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACTCCTGAGGCTAGTTTaGGAGGAGAGTCTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLLRLV*EESLVF
Trigger: GAAAACCAGACTCTCCTCCCAAACTAGCCTCAGGAG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGGACAGCCAGGGGCTaGGTAGACCTGGGGGCAATT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRTARG*VDLGAI
Trigger: AATTGCCCCCAGGTCTACCCAGCCCCTGGCTGTCCT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCAGCTGTGGTGGTCTaGGCTCTCCCTCTGTATCGC +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPAVVV*ALPLYR
Trigger: GCGATACAGAGGGAGAGCCCAGACCACCACAGCTGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCTGGGGTCAGAACCTaGGTTCCAGACCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPGVRT*VPDLGM
Trigger: CATGCCCAGGTCTGGAACCCAGGTTCTGACCCCAGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp CTCTTCTGGAGGGCTGGACAGTTGCTCCTGGCTCCAGAACCTGTCTaGCAAGGGACAGTGGGGTGCAGCCAAGTCTGTCTGTGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: LFWRAGQLLLAPEPV*QGTVGCSQVCLCLE
Trigger: TTCCAGGCACAGACAGACTTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTGTCCAGCCCTCCAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGGGGCCGGGGCCAATTaGATAGAGACTTCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGGAGAN*IETSPP
Trigger: GGGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGAGGTGGTGAGGGCTaGAGGAATGGCCTAAGGTTG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGGGEG*RNGLRL
Trigger: CAACCTTAGGCCATTCCTGCAGCCCTCACCACCTCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGAAGGTGGAATTGTCTaGTGCCTGGGGACCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVEGGIV*CLGTCR
Trigger: CCTGCAGGTCCCCAGGCAGCAGACAATTCCACCTTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGAAGGTGGAATTGTCTaGTGCCTGGGGACCTGCAGG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGEGGIV*CLGTCR
Trigger: CCTGCAGGTCCCCAGGCAGCAGACAATTCCACCTTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGAGGACAGCCTGCAGTaGGTCGGTGAATGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGEDSLQ*VGEWCL
Trigger: CAGACACCATTCACCGACCCACTGCAGGCTGTCCTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAGCCTGCATGAAAAGTaGGGAGCGGGGAGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVSLHEK*GAGSLA
Trigger: AGCCAGACTCCCCGCTCCCCACTTTTCATGCAGGCT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGAGAGAATGCCACCTaGGGTGGTCTCTGGATAGGG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGENAT*GGLWIG
Trigger: CCCTATCCAGAGACCACCCCAGGTGGCATTCTCTCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCTGCAGCAAGGCGCCTaGGAATTTTGCCCTACAGGG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGLQQGA*EFCPTG
Trigger: CCCTGTAGGGCAAAATTCCCAGGCGCCTTGCTGCAG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACTGCAGCAAGGCGCCTaGGAATTTTGCCCTACAGGG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQLQQGA*EFCPTG
Trigger: CCCTGTAGGGCAAAATTCCCAGGCGCCTTGCTGCAG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGGGGGCAATAGTGAATaGATGGGACCATCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVGGNSE*MGPSAW
Trigger: CCACGCAGATGGTCCCATTCATTCACTATTGCCCCC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGGGGCAATAGTGAATaGATGGGACCATCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGGNSE*MGPSAW
Trigger: CCACGCAGATGGTCCCATTCATTCACTATTGCCCCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACGGCACCCCCTTTTGTaGACCCAAACTGCAGAGATG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRHPLL*TQTAEM
Trigger: CATCTCTGCAGTTTGGGTTCACAAAAGGGGGTGCCG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCATTCCTTTGGGATCTaGTTGTCCAGCCCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVHSFGI*LSSPGW
Trigger: CCACCCTGGGCTGGACAATCAGATCCCAAAGGAATG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAATTTCTTACAGTGTGTaGAATGTGGGTCCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRISYSV*NVGPSL
Trigger: AAGGGAGGGACCCACATTGCACACACTGTAAGAAAT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACTGTGCCTGGAATGCTaGTGTCTCTCAAGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQLCLEC*CLSRSW
Trigger: CCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: PECVRLCVLSFWPGWESASFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAAAAACGCTTAGCAGATaGGAGGCCCCCTACACGGCT +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQKTLSR*EAPYTA
Trigger: AGCCGTGTAGGGGGCCTCCCATCTGCTAAGCGTTTT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGATGGGGGAGGGTCCTaGGTCTTTCTCTTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGDGGGS*VFLFRS
Trigger: GCTCCTAAAGAGAAAGACCCAGGACCCTCCCCCATC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCATGGGACCATCTGCGTaGGTCCCTACACGAGATGCT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGMGPSA*VPTRDA
Trigger: AGCATCTCGTGTAGGGACCCACGCAGATGGTCCCAT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGCTTGCTGTCTCTTCTaGAGGGCTGGACAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVACCLF*RAGQLL
Trigger: GAGCAACTGTCCAGCCCTCCAGAAGAGACAGCAAGC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp TGTCAGCGCCGCCAGCTGACCTCGGGAGCCAGGTCGCAGGAGTCCTaGACTAAGCACCATGCAAAGTTAGGTAAAGAGTTGGTTCTCGTC +
Preference number: 2 (lower is better)
Translates to: CQRRQLTSGARSQES*TKHHAKLGKELVLV
Trigger: GACGAGAACCAACTCTTTACCTAACTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACCTGGCTCCCGAGGTCAGCTGGCGGCGCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACAAGGGATTCAGAAATaGCCCCTCTGGGTACCCAAG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQQGIQK*PLWVPK
Trigger: CTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAATGAATGGGACCATCTaGGTGGGTCCCTACACGAGA +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQMNGTI*VGPYTR
Trigger: TCTCGTGTAGGGACCCACGCAGATGGTCCCATTCAT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCTGGTATGGGCTTTTaGCTGCTGTACTCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPGMGF*LLYSAK
Trigger: CTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCCTGGTATGGGCTTTTaGCTGCTGTACTCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGPGMGF*LLYSAK
Trigger: CTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCCATCCACAACATGCTaGCTGGTATGGGCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGPSTTC*LVWAFA
Trigger: GGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: PECVRLCVLSFWPGWESAGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLCVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTGGCGTCCCGAGAGTTaGAAACGTTGCGTCTTTACC +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGWRPES*KRCVFT
Trigger: GGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGAATGCCACCTGGGGTaGTCTCTGGATAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVECHLG*SLDRGK
Trigger: TTTTCCCCTATCCAGAGACCACCCCAGGTGGCATTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCTGGGCCCCCGGGTGTaGGCTGTGCAGGGACGCGAT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLGPRV*AVQGRD
Trigger: ATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCACAACATGCTGCCTaGTATGGGCTTTTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPQHAA*YGLLPA
Trigger: AGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTGTCTCTCAAGGTCCTaGGGCAGGGAAGGTGGAATT +
Preference number: 2 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVCLSRS*GREGGI
Trigger: AATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp CTCCACCCGGGTCATTGTCAGGTGCCCCCACGGAATGGGGACAATTaGCATATATTTGGGAGGCCTCCCTATTCTTTCCCACAGCATGGG +
Preference number: 2 (lower is better)
Translates to: LHPGHCQVPPRNGDN*HIFGRPPYSFPQHG
Trigger: CCCATGCTGTGGGAAAGAATAGGGAGGCCTCCCAAATATATGCAAATTGTCCCCATTCCGTGGGGGCACCTGACAATGACCCGGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGGGAGAGGTGGCCTTaGTGGGTGTCGCGCCTGTCG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGERWP*WVSRLS
Trigger: CGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGAGAGCCGGCGGGTCTaGCCAGGTGTCCCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCESRRV*PGVPLS
Trigger: GGACAAGGGGACACCTGGGCAGACCCGCCGGCTCTC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: AALASRELETLRLYLLSSGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: ALASRELETLRLYLLSSCSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCACATGCTGCCTGGTATaGGCTTTTGCCTGCTGTACT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGTCCLV*AFACCT
Trigger: AGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAGGGGGACCCAGGTCTaGCCCCTAAGCGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRGTQV*PLSGSP
Trigger: GGGAGAGCCGCTTAGGGGCCAGACCTGGGTCCCCCT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCACGGCGATGAGGGTTaGCTGGAGGGGCTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCHGDEG*LEGLVE
Trigger: CTCCACCAGCCCCTCCAGTCAACCCTCATCGCCGTG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGAAGAAAACACGGGATaGGTGTATGATGGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQEENTG*VYDGGC
Trigger: ACAGCCACCATCATACACTCATCCCGTGTTTTCTTC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTCCTCCTGAGTGTGTaGGTCTATGTGTTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: WPSSPAALASRELETLRLFLLSV*VYVFCL
Trigger: AAGACAAAACACATAGACGCACACACTCAGGAGGAA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYTVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
3UTR-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCAGATACCAGGACTGTaGCTGATAAATGCCCGCAGG +
Preference number: 2 (lower is better)
Translates to: PPECVRLCVLSFWPGWESQIPGL*LINARR
Trigger: CCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395111.7
3UTR-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATTGGCAAGACAGATTTaGTCAGGAGTGGGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQLARQI*SGVGQK
Trigger: TTTCTGCCCCACTCCTGAGCAAATCTGTCTTGCCAA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATTTGTGAACCCAAACTaGAGAGATGGGCACGGAATC +
Preference number: 2 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQFVNPN*RDGHGI
Trigger: GATTCCGTGCCCATCTCTGCAGTTTGGGTTCACAAA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ALASRELETLRLYLLSSCGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: PECVRLCVLSFWPGWESACVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGGCCACCCCATGGTTaGAGGACAGCCTGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCWPPHG*RTACSG
Trigger: CCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCGGGAGGTCAAGGGTaGTGGACTGACCCCACACTC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPGGQG*WTDPTL
Trigger: GAGTGTGGGGTCAGTCCACCACCCTTGACCTCCCGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp TGGTGTTTTTGTCTTACTCTGTCTGCAGCAAGGCGCCTGGGAATTTaGCCCTACAGGGACCCTGTAGCTTTTCCAAGAAACAGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: WCFCLTLSAARRLGI*PYRDPVAFPRNREA
Trigger: CGCCTCCCTGTTTCTTGGAAAAGCTACAGGGTCCCTGTAGGGCAAAATTCCCAGGCGCCTTGCTGCAGACAGAGTAAGACAAAAACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp CGTGGCAGAAATGGGGCAAGATGGGAGGATGCGGAGGAAGCTGGATaGAGAGATGTATGTCCCAGCGCCCTCCAAAGAGAAAGTAAAATC +
Preference number: 2 (lower is better)
Translates to: RGRNGARWEDAEEAG*RDVCPSALQRESKI
Trigger: GATTTTACTTTCTCTTTGGAGGGCGCTGGGACATACATCTCTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp GCAGGAGAATCCCAAAGCCACACCAGCAGACATGTGAGGCACTGCTaGGGAAAAGTCTGTTTTGGTATCACTGGCAACAAGTCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: AGESQSHTSRHVRHC*GKVCFGITGNKSCW
Trigger: CCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCTGCTGGTGTGGCTTTGGGATTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTTCCTCCTGAGTGTGTaGGTCTATGTGTTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGFLLSV*VYVFCL
Trigger: AAGACAAAACACATAGACGCACACACTCAGGAGGAA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTTCCTCCTGAGTGTGTaGGTCTATGTGTTTTGTCTT +
Preference number: 2 (lower is better)
Translates to: LGASGFAKLLRLVWEESLFLLSV*VYVFCL
Trigger: AAGACAAAACACATAGACGCACACACTCAGGAGGAA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: ALASRELETLRLYLLSSCTVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395111.7
3UTR-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTATTTCTTACAGTGTGTaGAATGTGGGTCCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGISYSV*NVGPSL
Trigger: AAGGGAGGGACCCACATTGCACACACTGTAAGAAAT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCTTCCTACTCCTCCATaGCCCATCTCCACCCGGGTC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLPTPP*PISTRV
Trigger: GACCCGGGTGGAGATGGGGCATGGAGGAGTAGGAAG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGAGGGTGGGGGACCTaGTGGAACCTTCTCCGGATT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGGWGT*WNLLRI
Trigger: AATCCGGAGAAGGTTCCAGCAGGTCCCCCACCCTCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 2 (lower is better)
Translates to: ALASRELETLRLYLLSSCCVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGAGGTGGTGAGGGCTaGAGGAATGGCCTAAGGTTG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGGGEG*RNGLRL
Trigger: CAACCTTAGGCCATTCCTGCAGCCCTCACCACCTCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCTGCTGGTACTGCTTTaGGTCCGCCTCCTCACCTTG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLLVLL*VRLLTL
Trigger: CAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGCTATGTGTGTGCGCTaGTATTGTTTAAAGGTAATA +
Preference number: 2 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGAMCVR*YCLKVI
Trigger: TATTACCTTTAAACAATATCAGCGCACACACATAGC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGCCTGGGGAGGCTGCTaGGGTGACTTTTTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCAWGGC*GDFLEE
Trigger: TTCTTCCAAAAAGTCACCTCAGCAGCCTCCCCAGGC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTTAAGGGCAATGTCGTaGCCAGCTGTGGTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLRAMS*PAVVVW
Trigger: CCAGACCACCACAGCTGGCCACGACATTGCCCTTAA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCCATCCTGTCCCCCTaGAGCCCTTGCTTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPILSP*SPCLFF
Trigger: AAAGAACAAGCAAGGGCTCCAGGGGGACAGGATGGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGTCGCAGGAGTCCTTaGCTAAGCACCATGCAAAGT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGRRSP*LSTMQS
Trigger: ACTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAATCAGCTACATGAATaGTGTGCACAGCCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCNQLHE*CAQPAR
Trigger: CCGGGCTGGCTGTGCACAGCATTCATGTAGCTGATT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGTCTCTCAAGGTCCTaGGGCAGGGAAGGTGGAATT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCCLSRS*GREGGI
Trigger: AATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR TCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 2 (lower is better)
Translates to: ALASRELETLRLYLLSSCFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCTTTGGCATTCCTTTaGGATCTGATTGTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPLAFL*DLIVQP
Trigger: GGGCTGGACAATCAGATCCCAAAGGAATGCCAAAGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGATGCGGAGGAAGCTaGATTGAGAGATGTATGTCC +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGCGGS*IERCMS
Trigger: GGACATACATCTCTCAATCCAGCTTCCTCCGCATCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGTGCCCCCACGGAATaGGGACAATTTGCATATATT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGAPTE*GQFAYI
Trigger: AATATATGCAAATTGTCCCCATTCCGTGGGGGCACC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGTACCATTGAGCAATaGATGGGCAGCGGTGTCATT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCCTIEQ*MGSGVI
Trigger: AATGACACCGCTGCCCATCCATTGCTCAATGGTACA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCTTCATATTCACAGCTaGAAGACAGAGACAGGGGAT +
Preference number: 2 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLHIHS*KTETGD
Trigger: ATCCCCTGTCTCTGTCTTCCAGCTGTGAATATGAAG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 90 bp TTAAACTACACGAGCAGAACATGCAGCTATGTGTGTGCGCTGATATaGTTTAAAGGTAATACTTATTCTCGGAAGGCAAGGCACATCTTG +
Preference number: 2 (lower is better)
Translates to: LNYTSRTCSYVCALI*FKGNTYSRKARHIL
Trigger: CAAGATGTGCCTTGCCTTCCGAGAATAAGTATTACCTTTAAACAATATCAGCGCACACACATAGCTGCATGTTCTGCTCGTGTAGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CCGTGTCCGGCAGAGGCGCGGGGGCCCGGGGAGAGGTaGCCTTGCTGGGTGTCGCGCCTGTCGGCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: PCPAEARGPGER*PCWVSRLSALG
Trigger: GCCCAGGGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCCGGGCCCCCGCGCCTCTGCCGGACACGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCCGGGGAGGGGTCCTaGTGTTTGAGCTCGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHAGEGS*CLSSVA
Trigger: GGCCACCGAGCTCAAACACAAGGACCCCTCCCCGGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp CTCCCGTGGGGGTGGCGGGGCCTGGCCCTCCAGTCCTaGGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCG +
Preference number: 3 (lower is better)
Translates to: LPWGWRGLALQS*GLGVPRVGNVA
Trigger: CGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCAGGCCCCGCCACCCCCACGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CTCGGGGTGAGAAGGGTGGCGTCCAGCCCAGGACTCTaGGCCCCCGGGTGTGGGCTGTGCAGGGACGCGATG +
Preference number: 3 (lower is better)
Translates to: LGVRRVASSPGL*APGCGLCRDAM
Trigger: CATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGACGCCACCCTTCTCACCCCGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTCCAGTCCTGCGGCCTaGGCGTCCCGAGAGTTGGAA +
Preference number: 3 (lower is better)
Translates to: LPESGPRFDPQGPPGERASSPAA*ASRELE
Trigger: TTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGCAGGGCAGGACGCTaGCGAAGTGACGCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGRAGR*RSDAQL
Trigger: GAGCTGGGCGTCACTTCGCAAGCGTCCTGCCCTGCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp CGGGTGGAGTGGCCACCCCATGGTTGGAGGACAGCCTaGAGTGGGTCGGTGAATGGTGTCTGGGGGCCGGCC +
Preference number: 3 (lower is better)
Translates to: RVEWPPHGWRTA*SGSVNGVWGPA
Trigger: GGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCACTCCACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp AATAACTTAGGAAGACGCCCTGTCCCGGGTCTCCCGTaGGGGTGGCGGGGCCTGGCCCTCCAGTCCTGCGGC +
Preference number: 3 (lower is better)
Translates to: NNLGRRPVPGLP*GWRGLALQSCG
Trigger: GCCGCAGGACTGGAGGGCCAGGCCCCGCCACCCCCACGGGAGACCCGGGACAGGGCGTCTTCCTAAGTTATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GGAGTGGCCACCCCATGGTTGGAGGACAGCCTGCAGTaGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGG +
Preference number: 3 (lower is better)
Translates to: GVATPWLEDSLQ*VGEWCLGAGPW
Trigger: CCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCACTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 3 (lower is better)
Translates to: LPESGPRFDPQGPPGERAMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 72 bp AGAGACTTCTCCTCCCAAACGGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGACAGCGAGTCGGCCGGC +
Preference number: 3 (lower is better)
Translates to: RDFSSQTGGREG*KSPQRDSESAG
Trigger: GCCGGCCGACTCGCTGTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCCCGTTTGGGAGGAGAAGTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp TCCAGCCCAGGACTCTGGGCCCCCGGGTGTGGGCTGTaGAGGGACGCGATGGTCCCAATAGTGATGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SSPGLWAPGCGL*RDAMVPIVMGP
Trigger: TGGCCCCATCACTATTGGGACCATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GACGGACGGAGGGACCAAGGGCTCGAGGCCAGAGGATaGCGAACCTCTCTTGGGGGTGATGGGGGAGGGTCC +
Preference number: 3 (lower is better)
Translates to: DGRRDQGLEARG*RTSLGGDGGGS
Trigger: GGACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATCCTCTGGCCTCGAGCCCTTGGTCCCTCCGTCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GCGGGGAGTCTGGCTGCGGGTGGAGTGGCCACCCCATaGTTGGAGGACAGCCTGCAGTGGGTCGGTGAATGG +
Preference number: 3 (lower is better)
Translates to: AGSLAAGGVATP*LEDSLQWVGEW
Trigger: CCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCACTCCACCCGCAGCCAGACTCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CCATGGTTGGAGGACAGCCTGCAGTGGGTCGGTGAATaGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAA +
Preference number: 3 (lower is better)
Translates to: PWLEDSLQWVGE*CLGAGPWPRDQ
Trigger: TTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 72 bp AGACAACAGCATGCTCAGCCACCGGACCACAGCCTGTaGCTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: RQQHAQPPDHSL*LGATWLSLCPA
Trigger: GGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGGTGGCTGAGCATGCTGTTGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp CTGGTACTGCTTTGGGTCCGCCTCCTCACCTTGCCCTaGCGGGAGGTCAAGGGTGGTGGACTGACCCCACAC +
Preference number: 3 (lower is better)
Translates to: LVLLWVRLLTLP*REVKGGGLTPH
Trigger: GTGTGGGGTCAGTCCACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GGAGTCTGGCTGCGGGTGGAGTGGCCACCCCATGGTTaGAGGACAGCCTGCAGTGGGTCGGTGAATGGTGTC +
Preference number: 3 (lower is better)
Translates to: GVWLRVEWPPHG*RTACSGSVNGV
Trigger: GACACCATTCACCGACCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCACTCCACCCGCAGCCAGACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCGAGAGTTGGAAACGTaGCGTCTTTACCTTTTGTCT +
Preference number: 3 (lower is better)
Translates to: LPESGPRFDPQGPPGERARELET*RLYLLS
Trigger: AGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGCAGGGCAGGACGCTaGCGAAGTGACGCCCAGCTC +
Preference number: 3 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGRAGR*RSDAQL
Trigger: GAGCTGGGCGTCACTTCGCAAGCGTCCTGCCCTGCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCCAGCTTAGTGTTTTaGGAGCGGCTCAACGGAAAA +
Preference number: 3 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPSLVF*ERLNGK
Trigger: TTTTCCGTTGAGCCGCTCCAAAAACACTAAGCTGGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGCCGGGGAGGGGTCCTaGTGTTTGAGCTCGGTGGCC +
Preference number: 3 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGAGEGS*CLSSVA
Trigger: GGCCACCGAGCTCAAACACAAGGACCCCTCCCCGGC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTAGAGCGGCCCACGCTTaGATCCCCAAGGGCCACCGG +
Preference number: 3 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRAAHA*IPKGHR
Trigger: CCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp GGGGCGAGGAACAGGGAGATAGAGCCAGGGATAGTCTaGCATGCATGTGTGTCAGCGCCGCCAGCTGACCTC +
Preference number: 3 (lower is better)
Translates to: GARNREIEPGIV*HACVSAPPADL
Trigger: GAGGTCAGCTGGCGGCGCTGACACACATGCATGGCAGACTATCCCTGGCTCTATCTCCCTGTTCCTCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CCAATCAGAGAGGAGAGCCCTTTCCCAGGGCCAAGATaGGCCCCGGAGGTCTGTCCTCTGGGCAAGGGATTC +
Preference number: 3 (lower is better)
Translates to: PIREESPFPGPR*APEVCPLGKGF
Trigger: GAATCCCTTGCCCAGAGGACAGACCTCCGGGGCCCATCTTGGCCCTGGGAAAGGGCTCTCCTCTCTGATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATTGGCGTCCCGAGAGTaGGAAACGTTGCGTCTTTAC +
Preference number: 3 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLASRE*ETLRLY
Trigger: GTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATCCAGTCCTGCGGCCTaGGCGTCCCGAGAGTTGGAA +
Preference number: 3 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQSSPAA*ASRELE
Trigger: TTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGATGGCGAACCTCTCTaGGGGGTGATGGGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGDGEPL*GVMGEG
Trigger: ACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAAGGTCGCAGGAGTCCTaGACTAAGCACCATGCAAAG +
Preference number: 3 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRSQES*TKHHAK
Trigger: CTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACCT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TACTTAAGGGCAATGTCGTGGCCAGCTGTGGTGGTCTaGGCTCTCCCTCTGTATCGCCTGGGGAGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: YLRAMSWPAVVV*ALPLYRLGRLL
Trigger: CAGCAGCCTCCCCAGGCGATACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACGACATTGCCCTTAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CCTCCTCACCTTGCCCTGCCGGGAGGTCAAGGGTGGTaGACTGACCCCACACTCTGTACCATTGAGCAATGG +
Preference number: 3 (lower is better)
Translates to: PPHLALPGGQGW*TDPTLCTIEQW
Trigger: CCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 3 (lower is better)
Translates to: WPSSPAALASRELETLRLMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp GGGTGTCCGGGCTCCCCCATCCCCTTCCTCGGAAAGTaGATTTCTTACAGTGTGTGCAATGTGGGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: GCPGSPIPFLGK*ISYSVCNVGPS
Trigger: GGAGGGACCCACATTGCACACACTGTAAGAAATGCACTTTCCGAGGAAGGGGATGGGGGAGCCCGGACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp ACAGTGGGGTGCAGCCAAGTCTGTCTGTGCCTGGAATaGTGCTGTCTCTCAAGGTCCTGGGGCAGGGAAGGT +
Preference number: 3 (lower is better)
Translates to: TVGCSQVCLCLE*CCLSRSWGREG
Trigger: ACCTTCCCTGCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCACCCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTaGGGCAGGGAAGGTGGAATTGTCTGCTGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: CLCLECCCLSRS*GREGGIVCCLG
Trigger: CCCCAGGCAGCAGACAATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 3 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTTACCTTTTGTCTTCTaGCTTGGGTGGGTTTTTATT +
Preference number: 3 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLPFVF*LGWVFI
Trigger: AATAAAAACCCACCCAAGCAAGAAGACAAAAGGTAA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAGGGGTCCTTGTGTTaGAGCTCGGTGGCCCTAAAA +
Preference number: 3 (lower is better)
Translates to: LGASGFAKLLRLVWEESLEGSLC*SSVALK
Trigger: TTTTAGGGCCACCGAGCTCAAACACAAGGACCCCTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGTGTGGAACAGCATTaGACCCTGAGCCAGGGGTAT +
Preference number: 3 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGVEQH*TLSQGY
Trigger: ATACCCCTGGCTCAGGGTCAAATGCTGTTCCACACC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTCCCTTTGCCTCCGGTaGCTCCTAGTTCCTTGGCAA +
Preference number: 3 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGSLCLR*LLVPWQ
Trigger: TTGCCAAGGAACTAGGAGCAACCGGAGGCAAAGGGA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCAACCGAGTCCCCTTaGGCATTCCTTTGGGATCTG +
Preference number: 3 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPTESP*AFLWDL
Trigger: CAGATCCCAAAGGAATGCCAAAGGGGACTCGGTTGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 72 bp GCCCTGGGGTCAGAACCTGGGTTCCAGACCTGGGCATaGAGGACTCCAGATCCTCCTCTCCCCAGTCAAATA +
Preference number: 3 (lower is better)
Translates to: ALGSEPGFQTWA*RTPDPPLPSQI
Trigger: TATTTGACTGGGGAGAGGAGGATCTGGAGTCCTTCATGCCCAGGTCTGGAACCCAGGTTCTGACCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp CTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTaGAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LAPEPVLQGTVG*SQVCLCLECCC
Trigger: ACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TCCTCGGAAAGTGCATTTCTTACAGTGTGTGCAATGTaGGTCCCTCCCTTTGGGGGTGTGAGCCGGGCGAGG +
Preference number: 3 (lower is better)
Translates to: SSESAFLTVCAM*VPPFGGVSRAR
Trigger: CCTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCACATTGCACACACTGTAAGAAATGCACTTTCCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CTTGCTGTCTCTTCTGGAGGGCTGGACAGTTGCTCCTaGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: LAVSSGGLDSCS*LQNLSCKGQWG
Trigger: ACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTGTCCAGCCCTCCAGAAGAGACAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTTGGCGTCCCGAGAGTaGGAAACGTTGCGTCTTTAC +
Preference number: 3 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVLASRE*ETLRLY
Trigger: GTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATTGGCGTCCCGAGAGTaGGAAACGTTGCGTCTTTAC +
Preference number: 3 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQLASRE*ETLRLY
Trigger: GTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAGGTCGCAGGAGTCCTaGACTAAGCACCATGCAAAG +
Preference number: 3 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRSQES*TKHHAK
Trigger: CTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACCT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCCTTTGGCATTCCTTaGGGATCTGATTGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPFGIP*GSDCPA
Trigger: GGCTGGACAATCAGATCCCAAAGGAATGCCAAAGGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp GATGGTCCCAATAGTGATGGGGCCACCCACTCCCTTTaGCTCCGGTTGCTCCTAGTTCCTTGGCAAGACAGA +
Preference number: 3 (lower is better)
Translates to: DGPNSDGATHSL*LRLLLVPWQDR
Trigger: TCTGTCTTGCCAAGGAACTAGGAGCAACCGGAGGCAAAGGGAGTGGGTGGCCCCATCACTATTGGGACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTaGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCT +
Preference number: 3 (lower is better)
Translates to: GPPVLRPWRPES*KRCVFTFCLLA
Trigger: AGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 3 (lower is better)
Translates to: PECVRLCVLSFWPGWESAMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGCCCAGGTGTCCCCTaGTCCCCCTCCTGTCCTCGC +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCCPGVP*SPSCPR
Trigger: GCGAGGACAGGAGGGGGACAAGGGGACACCTGGGCA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp ATCCCCTTCCTCGGAAAGTGCATTTCTTACAGTGTGTaGAATGTGGGTCCCTCCCTTTGGGGGTGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: IPFLGKCISYSV*NVGPSLWGCEP
Trigger: CGGCTCACACCCCCAAAGGGAGGGACCCACATTGCACACACTGTAAGAAATGCACTTTCCGAGGAAGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp AATGCTGTGCACAGCCAGCCCGGGCTCTCTGGCCAATaGATATTACTTAAGGGCAATGTCGTGGCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: NAVHSQPGLSGQ*ILLKGNVVASC
Trigger: ACAGCTGGCCACGACATTGCCCTTAAGTAATATGCATTGGCCAGAGAGCCCGGGCTGGCTGTGCACAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp CCATCCACAACATGCTGCCTGGTATGGGCTTTTGCCTaGTGTACTCAGCCAAGGTGCCAAGTGAGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: PSTTCCLVWAFA*CTQPRCQVSQG
Trigger: TCCTTGGCTCACTTGGCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp AGGGAGGCGGGGAGAACTAAACCATCCACAACATGCTaGCTGGTATGGGCTTTTGCCTGCTGTACTCAGCCA +
Preference number: 3 (lower is better)
Translates to: REAGRTKPSTTC*LVWAFACCTQP
Trigger: TGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTTAGTTCTCCCCGCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TCTCCACCCGGGTCATTGTCAGGTGCCCCCACGGAATaGGGACAATTTGCATATATTTGGGAGGCCTCCCTA +
Preference number: 3 (lower is better)
Translates to: SPPGSLSGAPTE*GQFAYIWEASL
Trigger: TAGGGAGGCCTCCCAAATATATGCAAATTGTCCCCATTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CAGAAATGGGGCAAGATGGGAGGATGCGGAGGAAGCTaGATTGAGAGATGTATGTCCCAGCGCCCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: QKWGKMGGCGGS*IERCMSQRPPK
Trigger: CTTTGGAGGGCGCTGGGACATACATCTCTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GGTGAGACTCTCAGGAAGTGTCTGACGTGGCAGAAATaGGGCAAGATGGGAGGATGCGGAGGAAGCTGGATT +
Preference number: 3 (lower is better)
Translates to: GETLRKCLTWQK*GKMGGCGGSWI
Trigger: AATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAGACACTTCCTGAGAGTCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACGGAATGGGGACAATTaGCATATATTTGGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRNGDN*HIFGRP
Trigger: AGGCCTCCCAAATATATGCAAATTGTCCCCATTCCG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 72 bp ATGGGGCAAGATGGGAGGATGCGGAGGAAGCTGGATTaGGAGATGTATGTCCCAGCGCCCTCCAAAGAGAAA +
Preference number: 3 (lower is better)
Translates to: MGQDGRMRRKLD*EMYVPAPSKEK
Trigger: TTTCTCTTTGGAGGGCGCTGGGACATACATCTCTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp AGGCGGGGAGAACTAAACCATCCACAACATGCTGCCTaGTATGGGCTTTTGCCTGCTGTACTCAGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: RRGELNHPQHAA*YGLLPAVLSQG
Trigger: ACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTTAGTTCTCCCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GGTGCCCCCACGGAATGGGGACAATTTGCATATATTTaGGAGGCCTCCCTATTCTTTCCCACAGCATGGGCA +
Preference number: 3 (lower is better)
Translates to: GAPTEWGQFAYI*EASLFFPTAWA
Trigger: TGCCCATGCTGTGGGAAAGAATAGGGAGGCCTCCCAAATATATGCAAATTGTCCCCATTCCGTGGGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCGAGAGTTGGAAACGTaGCGTCTTTACCTTTTGTCT +
Preference number: 3 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRELET*RLYLLS
Trigger: AGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTCTCCACCCGGGTCATaGTCAGGTGCCCCCACGGAA +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCSPPGS*SGAPTE
Trigger: TTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR GCA 72 bp GGAAAAGTCTGTTTTGGTATCACTGGCAACAAGTCCTaGTGGTACTGCTTTGGGTCCGCCTCCTCACCTTGC +
Preference number: 3 (lower is better)
Translates to: GKVCFGITGNKS*WYCFGSASSPC
Trigger: GCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TCTCTGGCCAATGCATATTACTTAAGGGCAATGTCGTaGCCAGCTGTGGTGGTCTGGGCTCTCCCTCTGTAT +
Preference number: 3 (lower is better)
Translates to: SLANAYYLRAMS*PAVVVWALPLY
Trigger: ATACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACGACATTGCCCTTAAGTAATATGCATTGGCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp GGGAGAACTAAACCATCCACAACATGCTGCCTGGTATaGGCTTTTGCCTGCTGTACTCAGCCAAGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: GRTKPSTTCCLV*AFACCTQPRCQ
Trigger: TTGGCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTTAGTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TGGTGGACTGACCCCACACTCTGTACCATTGAGCAATaGATGGGCAGCGGTGTCATTTTGAAGGTGAGACTC +
Preference number: 3 (lower is better)
Translates to: WWTDPTLCTIEQ*MGSGVILKVRL
Trigger: GAGTCTCACCTTCAAAATGACACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp AAAGTCTGTTTTGGTATCACTGGCAACAAGTCCTGCTaGTACTGCTTTGGGTCCGCCTCCTCACCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: KVCFGITGNKSC*YCFGSASSPCP
Trigger: AGGGCAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 3 (lower is better)
Translates to: ASRELETLRLYLLSSCLGMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAGGGGCCGGGGCCAATaGCATAGAGACTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRGRGQ*HRDFSS
Trigger: GGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCCT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGGAGGGCTGGACAGTaGCTCCTGGCTCCAGAACCT +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCWRAGQ*LLAPEP
Trigger: AGGTTCTGGAGCCAGGAGCAACTGTCCAGCCCTCCA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCACAATTTGCATATATTaGGGAGGCCTCCCTATTCTT +
Preference number: 3 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGTICIY*GGLPIL
Trigger: AAGAATAGGGAGGCCTCCCAAATATATGCAAATTGT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: LASRELETLRLYLLSSCLVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCCTGGAGCCCTTGCTaGTTCTTTCTCTGTGTGAGA +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPWSPC*FFLCVR
Trigger: TCTCACACAGAGAAAGAACAAGCAAGGGCTCCAGGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp CAGACATGTGAGGCACTGCTTGGGAAAAGTCTGTTTTaGTATCACTGGCAACAAGTCCTGCTGGTACTGCTT +
Preference number: 3 (lower is better)
Translates to: QTCEALLGKSLF*YHWQQVLLVLL
Trigger: AAGCAGTACCAGCAGGACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGTTGCTCCTAGTTCCTaGGCAAGACAGATTTGCTCA +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCVAPSS*ARQICS
Trigger: TGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAAC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCAAAGGAAAATGTTTaGTTTTGTCCCTCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPKENV*FCPSLL
Trigger: GAGGAGGGAGGGACAAAACAAAACATTTTCCTTTGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTTACCTTTTGTCTTCTaGCTTGGGTGGGTTTTTATT +
Preference number: 3 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLPFVF*LGWVFI
Trigger: AATAAAAACCCACCCAAGCAAGAAGACAAAAGGTAA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR TCA 72 bp ACTACACGAGCAGAACATGCAGCTATGTGTGTGCGCTaGTATTGTTTAAAGGTAATACTTATTCTCGGAAGG +
Preference number: 3 (lower is better)
Translates to: TTRAEHAAMCVR*YCLKVILILGR
Trigger: CCTTCCGAGAATAAGTATTACCTTTAAACAATATCAGCGCACACACATAGCTGCATGTTCTGCTCGTGTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTaGGTGGGTTTTTATTTCTTCTTCTTCTTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: WKRCVFTFCLLA*VGFYFFFFFFC
Trigger: GCAGAAGAAGAAGAAGAAGAAATAAAAACCCACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CCA 72 bp TATATATATATATATATGTATAGTATAGCCCTACACTaGAGGTCAAAGTACCATTGGGGAGGCCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: YIYIYMYSIALH*RSKYHWGGQSG
Trigger: CCCACTCTGGCCTCCCCAATGGTACTTTGACCTCCAGTGTAGGGCTATACTATACATATATATATATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCTGGGGGCCCAGCCGTaGTGCACGTCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHLGAQP*CTSRSW
Trigger: CCAGCTGCGGGACGTGCATCACGGCTGGGCCCCCAG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCGAGCGGGGACCGCTaGCGTCGGCCTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPSGDR*RRPPLS
Trigger: GGAGAGAGGAGGCCGACGCCAGCGGTCCCCGCTCGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCATCCATGGCGCTGCTaGGAGGAGGCGAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHHPWRC*EEARPA
Trigger: CGCCGGCCTCGCCTCCTCGCAGCAGCGCCATGGATG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589123.5
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACAGTGACGCCCAGCTCTaGCCCTCGGGCCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHSDAQL*PSGHAG
Trigger: CCCTGCGTGGCCCGAGGGGCAGAGCTGGGCGTCACT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLRTAQP*PGARRR
Trigger: CCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCCGGACCACAGCCTGTaGCTCGGTGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAPDHSL*LGATWL
Trigger: CAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCTCTGCGGTCTCCGCTaGCCGGCCGGGGTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLCGLR*PAGVRC
Trigger: ACAGCGGACCCCGGCCGGGCAGCGGAGACCGCAGAG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGAGAGCCGGCGGGTCTaGCCAGGTGTCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHESRRV*PGVPLS
Trigger: GGACAAGGGGACACCTGGGCAGACCCGCCGGCTCTC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAAACSH*RRCWAA
Trigger: CGCTGCCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGGCCCGGGGAGAGGTaGCCTTGCTGGGTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGPGER*PCWVSR
Trigger: GCGCGACACCCAGCAAGGCCACCTCTCCCCGGGCCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCTGGGGGCCGGCCCGTaGCCTAGGGACCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERALGAGP*PRDQSE
Trigger: CTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCCAGGGTGGGGCCCTaGGGTCAGAACCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPRVGP*GQNLGS
Trigger: GGAACCCAGGTTCTGACCCCAGGGCCCCACCCTGGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCAGGGGCTGGAGGTGGTaGGGGCTGCAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERARGWRW*GLQEWP
Trigger: AGGCCATTCCTGCAGCCCTCACCACCTCCAGCCCCT...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCCACGCCAATGTGGTaGGGCTGCACGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHATPMW*GCTHRT
Trigger: GGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGACCTGCCCTGGCTTTaGCCTGGGTCGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLDLPWL*PGSGEG
Trigger: CCCCTCCCCCGACCCAGGCCAAAGCCAGGGCAGGTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCATGTGCGTGGAAGGCTaGGGGGTGGTGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAMCVEG*GVVAWG
Trigger: CCCCCAAGCCACCACCCCCCAGCCTTCCACGCACAT...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGACCCCCACCCTGGCTaGGAAGCTTCCGGACACCCC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLDPHPG*EASGHP
Trigger: GGGGTGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGAGGCAAGCTCGGGGTaGGAAGGGTGGCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLEASSG*EGWRPA
Trigger: GGCTGGACGCCACCCTTCTCACCCCGAGCTTGCCTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERACPPSS*GCYSWA
Trigger: CGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCCGGGTGTGGGCTGTaGAGGGACGCGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPGCGL*RDAMVP
Trigger: TGGGACCATCGCGTCCCTGCACAGCCCACACCCGGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGACGGGCCGGTGGTGCTaGGTGAAGCTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLTGRWC*VKLERR
Trigger: CCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGTGGGTCCCTCCCTTTaGGGGTGTGAGCCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLVGPSL*GCEPGE
Trigger: CTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCAC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTTCCCAGGGCCAAGATaGGCCCCGGAGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAFPGPR*APEVCP
Trigger: AGGACAGACCTCCGGGGCCCATCTTGGCCCTGGGAA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGAGTCTGGCTGCGGGTaGAGTGGCCACCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAESGCG*SGHPMV
Trigger: AACCATGGGGTGGCCACTCCACCCGCAGCCAGACTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGAATTGTCTGCTGCCTaGGGACCTGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAELSAA*GPAGGP
Trigger: GGGTCCCCCTGCAGGTCCCCAGGCAGCAGACAATTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACGCTGTGCACGGCGATaGCGGGCCGGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRCARR*RAGGAG
Trigger: CCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGGACGCTTGCGAAGTaGCGCCCAGCTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLRTLAK*RPALPL
Trigger: GAGGGGCAGAGCTGGGCGTCACTTCGCAAGCGTCCT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGAGGCTAGGAGCAGGTaGGACCCGGAGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLEARSR*DPETCP
Trigger: AGGGCAGGTCTCCGGGTCTCACCTGCTCCTAGCCTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGGCTGGGACCCAAGATaGGAGGATGGGGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAGWDPR*EDGVWM
Trigger: CATCCACACCCCATCCTCTCATCTTGGGTCCCAGCC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACTCCTCCCTGCCTGGCTaGCCCACTAACCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHSSLPG*PTNHLA
Trigger: AGCCAGATGGTTAGTGGGGCAGCCAGGCAGGGAGGA...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGAGGCCAGTGCTGGCTaGGTTCAGGTCGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHEASAG*VQVVCQ
Trigger: CTGGCATACGACCTGAACCCAGCCAGCACTGGCCTC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGAGGCCAGTGCTGGCTaGGTTCAGGTCGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAEASAG*VQVVCQ
Trigger: CTGGCATACGACCTGAACCCAGCCAGCACTGGCCTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACTGTGGGGGAAGTAGGTaGAGGCCGTCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHCGGSR*RPSGVG
Trigger: TCCTACCCCAGACGGCCTCCACCTACTTCCCCCACA...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGGGTTGAGATGAGGTaGGTAGCGGATGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGVEMR*VADGRV
Trigger: CACACGGCCATCCGCTACCCACCTCATCTCAACCCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGGTTGCTGGCTGGCTaGGTCGCAGGCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLRLLAG*VAGQRD
Trigger: GTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCAGTCCTGCGGCCTTaGCGTCCCGAGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPVLRP*RPESWK
Trigger: TTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGGCCCGGGGAGAGGTaGCCTTGCTGGGTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGPGER*PCWVSR
Trigger: GCGCGACACCCAGCAAGGCCACCTCTCCCCGGGCCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATGCACGTCCCGCAGCTaGGCCCCGCGTCGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRCTSRS*APRRGR
Trigger: CCTACCCCGACGCGGGGCCCAGCTGCGGGACGTGCA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCAGCTGTGGTGGTCTaGGCTCTCCCTCTGTATCGC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPAVVV*ALPLYR
Trigger: GCGATACAGAGGGAGAGCCCAGACCACCACAGCTGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGAGAGGGGGTGCCTCTaGGGTGGGTGTGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLERGCL*GGCGTA
Trigger: TGCTGTTCCACACCCACCTCAGAGGCACCCCCTCTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERADVVGK*RAEDGC
Trigger: ACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGAAGGTGGGAGAGAATaGCACCTGGGGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHEGGRE*HLGWSL
Trigger: CAGAGACCACCCCAGGTGGCATTCTCTCCCACCTTC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCCCCAGGGAGAAGTTaGGTCCTGTTCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPPGRS*VLFQSP
Trigger: TGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGCGAGGTCGGCGACGTaGCTCCTCCCTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRARSAT*LLPRRW
Trigger: CCACCTCCGAGGGAGGAGCCACGTCGCCGACCTCGC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACGCGCCTGTCGGCCCTaGGCACAGGCTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRACRP*AQAPGC
Trigger: ACAGCCTGGAGCCTGTGCCCAGGGCCGACAGGCGCG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGAGGACAGCCTGCAGTaGGTCGGTGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHEDSLQ*VGEWCL
Trigger: CAGACACCATTCACCGACCCACTGCAGGCTGTCCTC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACAGCCTGCATGAAAAGTaGGGAGCGGGGAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHSLHEK*GAGSLA
Trigger: AGCCAGACTCCCCGCTCCCCACTTTTCATGCAGGCT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATCCAGCCCAGGACTCTaGGCCCCCGGGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRSSPGL*APGCGL
Trigger: CAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGGTGGGGGACCTGCTaGAACCTTCTCCGGATTGGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGWGTC*NLLRIG
Trigger: CCCAATCCGGAGAAGGTTCCAGCAGGTCCCCCACCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCGCTGTGCACGGCGATaGCGGGCCGGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFRCARR*RAGGAG
Trigger: CCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCGCTGTGCACGGCGATaGCGGGCCGGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLRCARR*RAGGAG
Trigger: CCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCCTGGGGAGGCTGCTaGGGTGACTTTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHAWGGC*GDFLEE
Trigger: TTCTTCCAAAAAGTCACCTCAGCAGCCTCCCCAGGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACTTCCAGACCTGGGCATaGAGGACTCCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHFQTWA*RTPDPP
Trigger: AGGAGGATCTGGAGTCCTTCATGCCCAGGTCTGGAA...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCATTCCTTTGGGATCTaGTTGTCCAGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAHSFGI*LSSPGW
Trigger: CCACCCTGGGCTGGACAATCAGATCCCAAAGGAATG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCGGAGGAAGCTGGATTaGGAGATGTATGTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERARRKLD*EMYVPA
Trigger: CGCTGGGACATACATCTCTCAATCCAGCTTCCTCCG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGCCGGGGGCCGGCTGTaGTGCCCCCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLAGGRL*CPLGFL
Trigger: CAGGAATCCCAGGGGGCAGCACAGCCGGCCCCCGGC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGGGAGAGGTGGCCTTaGTGGGTGTCGCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGERWP*WVSRLS
Trigger: CGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCGCCTGCCCCACCCTaGCCGCCTCTGCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLSPAPP*PPLRSP
Trigger: CGGAGACCGCAGAGGCGGGCAGGGTGGGGCAGGCGA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGAGCCAGGGATAGTCTaGCATGCATGTGTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHEPGIV*HACVSA
Trigger: CGCTGACACACATGCATGGCAGACTATCCCTGGCTC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCTTCCTACTCCTCCATaGCCCATCTCCACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLPTPP*PISTRV
Trigger: GACCCGGGTGGAGATGGGGCATGGAGGAGTAGGAAG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGCAAGATGGGAGGATaGGGAGGAAGCTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGKMGG*GGSWIE
Trigger: CTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGGCAAGATGGGAGGATaGGGAGGAAGCTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAGKMGG*GGSWIE
Trigger: CTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGAGGGTGGGGGACCTaGTGGAACCTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGGWGT*WNLLRI
Trigger: AATCCGGAGAAGGTTCCAGCAGGTCCCCCACCCTCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGAGAGCCGGCGGGTCTaGCCAGGTGTCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRESRRV*PGVPLS
Trigger: GGACAAGGGGACACCTGGGCAGACCCGCCGGCTCTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTGTGGGGGAAGTAGGTaGAGGCCGTCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLCGGSR*RPSGVG
Trigger: TCCTACCCCAGACGGCCTCCACCTACTTCCCCCACA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACTCCCTCGGAGGTGGTaGCGGGTTTGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLPRRW*RVWWQG
Trigger: CCCCTGCCACCAAACCCGCCACCACCTCCGAGGGAG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGCGGTCCCCCTTCGCTaGGAGGCACCAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLAVPLR*EAPGRG
Trigger: CCCCCTCCCTGGTGCCTCCCAGCGAAGGGGGACCGC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGATGGGGGAGGGTCCTaGGTCTTTCTCTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHDGGGS*VFLFRS
Trigger: GCTCCTAAAGAGAAAGACCCAGGACCCTCCCCCATC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACTGGGGGCCGGCCCGTaGCCTAGGGACCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLGAGP*PRDQSE
Trigger: CTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCAGCTGTGGTGGTCTaGGCTCTCCCTCTGTATCGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPAVVV*ALPLYR
Trigger: GCGATACAGAGGGAGAGCCCAGACCACCACAGCTGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCCAAACTGCAGAGATaGGCACGGAATCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPKLQR*ARNPAS
Trigger: GGAAGCAGGATTCCGTGCCCATCTCTGCAGTTTGGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCCCAAACTGCAGAGATaGGCACGGAATCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAPKLQR*ARNPAS
Trigger: GGAAGCAGGATTCCGTGCCCATCTCTGCAGTTTGGG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCTGGACAGTTGCTCCTaGCTCCAGAACCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERALDSCS*LQNLSC
Trigger: GCAAGACAGGTTCTGGAGCCAGGAGCAACTGTCCAG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCTTGCTGTCTCTTCTaGAGGGCTGGACAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHACCLF*RAGQLL
Trigger: GAGCAACTGTCCAGCCCTCCAGAAGAGACAGCAAGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLGGREG*KSPQRD
Trigger: GTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGAGCGGCCCACGCTTTaGTCCCCAAGGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFERPTL*SPRATG
Trigger: CCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCAAGGGATTCAGAAATaGCCCCTCTGGGTACCCAAG +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAQGIQK*PLWVPK
Trigger: CTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACACACCAGCAGACATGTaGGGCACTGCTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHTPADM*GTAWEK
Trigger: CTTTTCCCAAGCAGTGCCTCACATGTCTGCTGGTGT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGGCGCTCGCCGTCGGTaGTCTCCAGCGGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLGARRR*SPAGCP
Trigger: AGGGCATCCCGCTGGAGAGCACCGACGGCGAGCGCC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRPSSCG*YSWASW
Trigger: CCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGTATGGGCTTTTGCCTaGTGTACTCAGCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAVWAFA*CTQPRC
Trigger: GCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATAC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCAAGGGACAGTGGGGTaGAGCCAAGTCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLQGTVG*SQVCLC
Trigger: GCACAGACAGACTTGGCTGCACCCCACTGTCCCTTG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCCGGAGACCTGCCCTaGCTTTGGCCTGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPGDLP*LWPGSG
Trigger: CCCCGACCCAGGCCAAAGCCAGGGCAGGTCTCCGGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGAGGACAGCCTGCAGTaGGTCGGTGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLEDSLQ*VGEWCL
Trigger: CAGACACCATTCACCGACCCACTGCAGGCTGTCCTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATGGCTGCGGGTGGAGTaGCCACCCCATGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRWLRVE*PPHGWR
Trigger: CCTCCAACCATGGGGTGGCCACTCCACCCGCAGCCA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGAGAGAATGCCACCTaGGGTGGTCTCTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGENAT*GGLWIG
Trigger: CCCTATCCAGAGACCACCCCAGGTGGCATTCTCTCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCTGGGCCCCCGGGTGTaGGCTGTGCAGGGACGCGAT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLLGPRV*AVQGRD
Trigger: ATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGCTGTTGAATGGTaGCTTGTCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHRAVEW*LVHLCL
Trigger: AAGACAGAGATGGACAAGTCACCATTCAACAGCCCG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACGTCGGGGTAGGCGATaGAAGTGCAAACGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRRGRR*KCKRRS
Trigger: GGACCGCCGTTTGCACTTTCATCGCCTACCCCGACG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACTGGGGGCCCAGCCGTaGTGCACGTCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQLGAQP*CTSRSW
Trigger: CCAGCTGCGGGACGTGCATCACGGCTGGGCCCCCAG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGAGAGGGGGTGCCTCTaGGGTGGGTGTGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRERGCL*GGCGTA
Trigger: TGCTGTTCCACACCCACCTCAGAGGCACCCCCTCTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGGGGCAATAGTGAATaGATGGGACCATCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGGNSE*MGPSAW
Trigger: CCACGCAGATGGTCCCATTCATTCACTATTGCCCCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTTCCAGACCTGGGCATaGAGGACTCCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLFQTWA*RTPDPP
Trigger: AGGAGGATCTGGAGTCCTTCATGCCCAGGTCTGGAA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCGGGCGATCCCGCTGTaGACGGCGATGACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRAIPL*TAMTGR
Trigger: CCGGCCCGTCATCGCCGTGCACAGCGGGATCGCCCG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGGGGAGAGGTGGCCTTaGTGGGTGTCGCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFGERWP*WVSRLS
Trigger: CGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCTCTGCGGTCTCCGCTaGCCGGCCGGGGTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGLCGLR*PAGVRC
Trigger: ACAGCGGACCCCGGCCGGGCAGCGGAGACCGCAGAG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGAGCCAGGGATAGTCTaGCATGCATGTGTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLEPGIV*HACVSA
Trigger: CGCTGACACACATGCATGGCAGACTATCCCTGGCTC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTTGTCTTACTCTGTCTaGAGCAAGGCGCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERALSYSV*SKAPGN
Trigger: ATTCCCAGGCGCCTTGCTGCAGACAGAGTAAGACAA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGTGACAAAGCTCTCCTaGAAGTCGGTCGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLVTKLS*KSVVSS
Trigger: GCTGGACACGACCGACTTCCAGGAGAGCTTTGTCAC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFAACSH*RRCWAA
Trigger: CGCTGCCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAAGGCGGGGAGAGTCCTaGGGGGACGGGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRRGES*GDGLLN
Trigger: ATTCAACAGCCCGTCCCCCCAGGACTCTCCCCGCCT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGAGGTGGGTAGCGGATaGCCGTGTGGGGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQREVGSG*PCGGSR
Trigger: CCTACTTCCCCCACACGGCCATCCGCTACCCACCTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGTCCAGGTTGCTGGCTaGCTGGGTCGCAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFVQVAG*LGRRPA
Trigger: CGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGAC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGCGGTCCCCCTTCGCTaGGAGGCACCAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVAVPLR*EAPGRG
Trigger: CCCCCTCCCTGGTGCCTCCCAGCGAAGGGGGACCGC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGCGGTCCCCCTTCGCTaGGAGGCACCAGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGAVPLR*EAPGRG
Trigger: CCCCCTCCCTGGTGCCTCCCAGCGAAGGGGGACCGC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATTCCGGACACCCCAATaGCACAACCCGACCACCCCC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRFRTPQ*HNPTTP
Trigger: GGGGGTGGTCGGGTTGTGCCATTGGGGTGTCCGGAA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGCAATAGTGAATGAATaGGACCATCTGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAAIVNE*DHLRGS
Trigger: GGACCCACGCAGATGGTCCCATTCATTCACTATTGC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACGTGGCCAGCTGTGGTaGTCTGGGCTCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRGQLW*SGLSLC
Trigger: ACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCTTTGGCATTCCTTTaGGATCTGATTGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPLAFL*DLIVQP
Trigger: GGGCTGGACAATCAGATCCCAAAGGAATGCCAAAGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTCTTGCAAGGGACAGTaGGGTGCAGCCAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLSCKGQ*GAAKSV
Trigger: GACAGACTTGGCTGCACCCCACTGTCCCTTGCAAGA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCTGACGTGGCAGAAATaGGGCAAGATGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLTWQK*GKMGGC
Trigger: GCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACAGGAAGTGTCTGACGTaGCAGAAATGGGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHRKCLT*QKWGKM
Trigger: CATCTTGCCCCATTTCTGCCACGTCAGACACTTCCT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGCCCATATTCCTATTaGATCCCCTTCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGPYSY*IPFLLP
Trigger: AGGAAGGAGGAAGGGGATCCAATAGGAATATGGGCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCCATCCTGTCCCCCTaGAGCCCTTGCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPILSP*SPCLFF
Trigger: AAAGAACAAGCAAGGGCTCCAGGGGGACAGGATGGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAAGGAGGAGGGGAGGGTaGGGGACCTGCTGGAACCTT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRRRGG*GTCWNL
Trigger: AAGGTTCCAGCAGGTCCCCCACCCTCCCCTCCTCCT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGAACTCATCCTGGGTaGGGCAGAGCGGGGACGAAT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGTHPG*GRAGTN
Trigger: ATTCGTCCCCGCTCTGCCTCACCCAGGATGAGTTCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443272.3
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRTAQP*PGARRR
Trigger: CCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRTAQP*PGARRR
Trigger: CCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCGCTGTGCACGGCGATaGCGGGCCGGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRCARR*RAGGAG
Trigger: CCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGAGGTGCCAGCATCTaGGCAGAAAGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGGASI*AERQWL
Trigger: CAGCCACTGCCTTTCTGCTCAGATGCTGGCACCTCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGGREG*KSPQRD
Trigger: GTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGCGGGCGCGAGGGCTaGAAGAGTCCCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGGREG*KSPQRD
Trigger: GTCTCGCTGGGGACTCTTTCAGCCCTCGCGCCCGCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGTTCTCGTCGCGCCCTaGCCCCTCTGGAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLVLVAP*PLWSPA
Trigger: AGCCGGGCTCCAGAGGGGTCAGGGCGCGACGAGAAC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGTATGCCAGCCTGCATaGAAAGTGGGGAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRVCQPA*KVGSGE
Trigger: CTCCCCGCTCCCCACTTTTCATGCAGGCTGGCATAC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGCGCTCGCCGTCGGTaGTCTCCAGCGGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGARRR*SPAGCP
Trigger: AGGGCATCCCGCTGGAGAGCACCGACGGCGAGCGCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPSSCG*YSWASW
Trigger: CCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCGGGCGATCCCGCTGTaGACGGCGATGACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRAIPL*TAMTGR
Trigger: CCGGCCCGTCATCGCCGTGCACAGCGGGATCGCCCG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCAGATACCAGGACTGTaGCTGATAAATGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLQIPGL*LINARR
Trigger: CCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCCCGGGGGCGGAGGTaGCAGCATCTGAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPRGRR*QHLSRK
Trigger: CTTTCTGCTCAGATGCTGGCACCTCCGCCCCCGGGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGAGTGACGCCCAGCTCTaGCCCTCGGGCCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLSDAQL*PSGHAG
Trigger: CCCTGCGTGGCCCGAGGGGCAGAGCTGGGCGTCACT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAATCAGCTACATGAATaGTGTGCACAGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLNQLHE*CAQPAR
Trigger: CCGGGCTGGCTGTGCACAGCATTCATGTAGCTGATT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGTATGGGCTTTTGCCTaGTGTACTCAGCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLVWAFA*CTQPRC
Trigger: GCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATAC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGCGGAGGACGGGTGTaGGCTCCGGGCGATCCCGCT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGSGGRV*APGDPA
Trigger: AGCGGGATCGCCCGGAGCCCACACCCGTCCTCCGCT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTAGGTTGCTGGCTGGCTaGGTCGCAGGCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLRLLAG*VAGQRD
Trigger: GTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCTCCTCCCTCGGAGGTaGTGGCGGGTTTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFLLPRR*WRVWWQ
Trigger: CTGCCACCAAACCCGCCACCACCTCCGAGGGAGGAG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGCGAGGTCGGCGACGTaGCTCCTCCCTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQARSAT*LLPRRW
Trigger: CCACCTCCGAGGGAGGAGCCACGTCGCCGACCTCGC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGCCTCCTCTCTCCTCTaGGGGCCCAGCCGTGATGCA +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLASSLL*GPSRDA
Trigger: TGCATCACGGCTGGGCCCCCAGAGGAGAGAGGAGGC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGACCTGCCCTGGCTTTaGCCTGGGTCGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVDLPWL*PGSGEG
Trigger: CCCCTCCCCCGACCCAGGCCAAAGCCAGGGCAGGTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGTGCCCCCACGGAATaGGGACAATTTGCATATATT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGAPTE*GQFAYI
Trigger: AATATATGCAAATTGTCCCCATTCCGTGGGGGCACC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTGTCTCTCAAGGTCCTaGGGCAGGGAAGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLCLSRS*GREGGI
Trigger: AATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACAAGTCTGTCTGTGCCTaGAATGCTGCTGTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHKSVCA*NAAVSQ
Trigger: TTGAGAGACAGCAGCATTCCAGGCACAGACAGACTT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTATGTGCGTGGAAGGCTaGGGGGTGGTGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLMCVEG*GVVAWG
Trigger: CCCCCAAGCCACCACCCCCCAGCCTTCCACGCACAT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRTAQP*PGARRR
Trigger: CCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCGCTGTGCACGGCGATaGCGGGCCGGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYRCARR*RAGGAG
Trigger: CCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCG...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGTTCTCGTCGCGCCCTaGCCCCTCTGGAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGVLVAP*PLWSPA
Trigger: AGCCGGGCTCCAGAGGGGTCAGGGCGCGACGAGAAC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCCGGACCACAGCCTGTaGCTCGGTGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLPDHSL*LGATWL
Trigger: CAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGGGAGGCTGCTGAGGTaGCTTTTTGGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLGRLLR*LFGRKH
Trigger: GTGTTTTCTTCCAAAAAGTCACCTCAGCAGCCTCCC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGAGGCAAGCTCGGGGTaGGAAGGGTGGCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVEASSG*EGWRPA
Trigger: GGCTGGACGCCACCCTTCTCACCCCGAGCTTGCCTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTGTTCTTTCTCTGTGTaGGAATGCTCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLCSFSV*ECSGLG
Trigger: ACCCAGCCCTGAGCATTCTCACACAGAGAAAGAACA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGCGCTCGCCGTCGGTaGTCTCCAGCGGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGARRR*SPAGCP
Trigger: AGGGCATCCCGCTGGAGAGCACCGACGGCGAGCGCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACGGGCGATCCCGCTGTaGACGGCGATGACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESARAIPL*TAMTGR
Trigger: CCGGCCCGTCATCGCCGTGCACAGCGGGATCGCCCG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCGGGCGATCCCGCTGTaGACGGCGATGACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYRAIPL*TAMTGR
Trigger: CCGGCCCGTCATCGCCGTGCACAGCGGGATCGCCCG...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGGGCGATCCCGCTGTaGACGGCGATGACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRAIPL*TAMTGR
Trigger: CCGGCCCGTCATCGCCGTGCACAGCGGGATCGCCCG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGCCGGGGGCCGGCTGTaGTGCCCCCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAAGGRL*CPLGFL
Trigger: CAGGAATCCCAGGGGGCAGCACAGCCGGCCCCCGGC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACATTTCTTACAGTGTGTaGAATGTGGGTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHISYSV*NVGPSL
Trigger: AAGGGAGGGACCCACATTGCACACACTGTAAGAAAT...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGAGGTGGTGAGGGCTaGAGGAATGGCCTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGGGEG*RNGLRL
Trigger: CAACCTTAGGCCATTCCTGCAGCCCTCACCACCTCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGAAGGTGGAATTGTCTaGTGCCTGGGGACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQREGGIV*CLGTCR
Trigger: CCTGCAGGTCCCCAGGCAGCAGACAATTCCACCTTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCTCCTCACCTTGCCCTaGCGGGAGGTCAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFLLTLP*REVKGG
Trigger: ACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTTATGGGGACCGGAGTaGGGGCTGGGCCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGLWGPE*GLGRPP
Trigger: AGGCGGCCGGCCCAGCCCGCACTCCGGTCCCCATAA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLCGCYS*ASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTAGGCGGGGAGAGTCCTaGGGGGACGGGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFRRGES*GDGLLN
Trigger: ATTCAACAGCCCGTCCCCCCAGGACTCTCCCCGCCT...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAACGGGCCGGTGGTGCTaGGTGAAGCTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQTGRWC*VKLERR
Trigger: CCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAGCGGAGGACGGGTGTaGGCTCCGGGCGATCCCGCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGSGGRV*APGDPA
Trigger: AGCGGGATCGCCCGGAGCCCACACCCGTCCTCCGCT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGAGGTGGGTAGCGGATaGCCGTGTGGGGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLEVGSG*PCGGSR
Trigger: CCTACTTCCCCCACACGGCCATCCGCTACCCACCTC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGAGGTGGGTAGCGGATaGCCGTGTGGGGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFEVGSG*PCGGSR
Trigger: CCTACTTCCCCCACACGGCCATCCGCTACCCACCTC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGTCCAGGTTGCTGGCTaGCTGGGTCGCAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLVQVAG*LGRRPA
Trigger: CGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGAC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGCGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGGPGC*LAGSQA
Trigger: GGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAGAGGTGGCCTTGCTaGGTGTCGCGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLERWPC*VSRLSA
Trigger: GGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGTGGGTCCCTCCCTTTaGGGGTGTGAGCCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGVGPSL*GCEPGE
Trigger: CTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCAC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTGCACGTCCCGCAGCTaGGCCCCGCGTCGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESCTSRS*APRRGR
Trigger: CCTACCCCGACGCGGGGCCCAGCTGCGGGACGTGCA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTCCGGACACCCCAATaGCACAACCCGACCACCCCC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLFRTPQ*HNPTTP
Trigger: GGGGGTGGTCGGGTTGTGCCATTGGGGTGTCCGGAA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCAGTGGGTCGGTGAATaGTGTCTGGGGGCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGQWVGE*CLGAGP
Trigger: CGGGCCGGCCCCCAGACACCATTCACCGACCCACTG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGCAATAGTGAATGAATaGGACCATCTGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLAIVNE*DHLRGS
Trigger: GGACCCACGCAGATGGTCCCATTCATTCACTATTGC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTGTCGTGGCCAGCTGTaGTGGTCTGGGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFCRGQL*WSGLSL
Trigger: GAGGGAGAGCCCAGACCACCACAGCTGGCCACGACA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGGAAGTGTCTGACGTaGCAGAAATGGGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLRKCLT*QKWGKM
Trigger: CATCTTGCCCCATTTCTGCCACGTCAGACACTTCCT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCCGGGAGGTCAAGGGTaGTGGACTGACCCCACACTC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLPGGQG*WTDPTL
Trigger: GAGTGTGGGGTCAGTCCACCACCCTTGACCTCCCGG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGTCACTTTCTGTAAATaGTACTTAGGTAGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHVTFCK*YLGRRV
Trigger: GACGCGCCTACCTAAGTACCATTTACAGAAAGTGAC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGCGAAGGCGCGGACGTaGGGCAGCAGGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAAKART*GSRASM
Trigger: CATCGAGGCCCTGCTGCCTCACGTCCGCGCCTTCGC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACGCGAAGGCGCGGACGTaGGGCAGCAGGGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDAKART*GSRASM
Trigger: CATCGAGGCCCTGCTGCCTCACGTCCGCGCCTTCGC...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGACGCACAGGACCGGGTaGCCGCACTGCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGTHRTG*PHCAAL
Trigger: CAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGTATGCCAGCCTGCATaGAAAGTGGGGAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLVCQPA*KVGSGE
Trigger: CTCCCCGCTCCCCACTTTTCATGCAGGCTGGCATAC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTAGCCAAGGTGCCAAGTaGGCCAAGGAGGCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFSQGAK*AKEASS
Trigger: CGAGCTTGCCTCCTTGGCTCACTTGGCACCTTGGCT...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTAGCCAAGGTGCCAAGTaGGCCAAGGAGGCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLSQGAK*AKEASS
Trigger: CGAGCTTGCCTCCTTGGCTCACTTGGCACCTTGGCT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCCTGTCCGGGGACTaGCGCTTTGCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLSLSGD*RFALHL
Trigger: GAGATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTCCCTGTCCGGGGACTaGCGCTTTGCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFSLSGD*RFALHL
Trigger: GAGATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCGGGCGATCCCGCTGTaGACGGCGATGACGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSRAIPL*TAMTGR
Trigger: CCGGCCCGTCATCGCCGTGCACAGCGGGATCGCCCG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGCCGGGGGCCGGCTGTaGTGCCCCCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIAGGRL*CPLGFL
Trigger: CAGGAATCCCAGGGGGCAGCACAGCCGGCCCCCGGC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGACTCATCCATGGCGCTaGTGCGAGGAGGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLTHPWR*CEEARP
Trigger: CGGCCTCGCCTCCTCGCAGCAGCGCCATGGATGAGT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589123.5
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCCCCGGGGGCGGAGGTaGCAGCATCTGAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLPRGRR*QHLSRK
Trigger: CTTTCTGCTCAGATGCTGGCACCTCCGCCCCCGGGG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTCGCCTGCCCCACCCTaGCCGCCTCTGCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSSPAPP*PPLRSP
Trigger: CGGAGACCGCAGAGGCGGGCAGGGTGGGGCAGGCGA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTCGAGGGGCAGCAGGTaGCTGGGCCTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVSRGSR*LGLTSS
Trigger: GGAGGAAGTGAGGCCCAGGCACCTGCTGCCCCTCGA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATCGAGGGGCAGCAGGTaGCTGGGCCTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQSRGSR*LGLTSS
Trigger: GGAGGAAGTGAGGCCCAGGCACCTGCTGCCCCTCGA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCCTTCCTCGGAAAGTaGATTTCTTACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPFLGK*ISYSVC
Trigger: GCACACACTGTAAGAAATGCACTTTCCGAGGAAGGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCGGGTCATTGTCAGGTaGCCCCACGGAATGGGGACA +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLRVIVR*PHGMGT
Trigger: TGTCCCCATTCCGTGGGGGCACCTGACAATGACCCG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACTGTGCCTGGAATGCTaGTGTCTCTCAAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLCLEC*CLSRSW
Trigger: CCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGACGGGCCGGTGGTGCTaGGTGAAGCTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGTGRWC*VKLERR
Trigger: CCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGCGGAGGACGGGTGTaGGCTCCGGGCGATCCCGCT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESASGGRV*APGDPA
Trigger: AGCGGGATCGCCCGGAGCCCACACCCGTCCTCCGCT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGGGGTTGAGATGAGGTaGGTAGCGGATGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLGVEMR*VADGRV
Trigger: CACACGGCCATCCGCTACCCACCTCATCTCAACCCC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAACGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVNGPGC*LAGSQA
Trigger: GGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGTT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCCGAGCGGGGACCGCTaGCGTCGGCCTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSPSGDR*RRPPLS
Trigger: GGAGAGAGGAGGCCGACGCCAGCGGTCCCCGCTCGG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATTAAGGGCAATGTCGTaGCCAGCTGTGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLRAMS*PAVVVW
Trigger: CCAGACCACCACAGCTGGCCACGACATTGCCCTTAA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTGGGCCCCCGGGTGTaGGCTGTGCAGGGACGCGAT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLGPRV*AVQGRD
Trigger: ATCGCGTCCCTGCACAGCCCACACCCGGGGGCCCAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATCCAGCCCAGGACTCTaGGCCCCCGGGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESASSPGL*APGCGL
Trigger: CAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGGAAAAGTCTGTTTTaGTATCACTGGCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGKSLF*YHWQQV
Trigger: GACTTGTTGCCAGTGATACCAAAACAGACTTTTCCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGAACCTTCTCCGGATTaGGTTCATGAGCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPESGPRFDPQGPPGERAEPSPD*VHEHFC
Trigger: ACAAAAATGCTCATGAACCCAATCCGGAGAAGGTTC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCCCCGAATCGCCTTATaGGGACCGGAGTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLPRIAL*GPECGL
Trigger: CAGCCCGCACTCCGGTCCCCATAAGGCGATTCGGGG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641145.1
3UTR CAA 72 bp ACCAAGGGCTCGAGGCCAGAGGATGGCGAACCTCTCTaGGGGGTGATGGGGGAGGGTCCTGGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TKGSRPEDGEPL*GVMGEGPGSFS
Trigger: AGAGAAAGACCCAGGACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATCCTCTGGCCTCGAGCCCTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 72 bp AGCGGCTCTCCCAACCGAGTCCCCTTTGGCATTCCTTaGGGATCTGATTGTCCAGCCCAGGGTGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SGSPNRVPFGIP*GSDCPAQGGAL
Trigger: CAGGGCCCCACCCTGGGCTGGACAATCAGATCCCAAAGGAATGCCAAAGGGGACTCGGTTGGGAGAGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: GRRPLLSQIPGLCLINARRTAQP*PGARRR
Trigger: CCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCG...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACACGCACAGGACCGGGTaGCCGCACTGCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDTHRTG*PHCAAL
Trigger: CAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGT...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCGGTCGTGTCCAGCGTaGTGGGCTTGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRSCPA*WACCPP
Trigger: AGGAGGACAGCAAGCCCATCACGCTGGACACGACCG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCACGGCGATGAGGGTTaGCTGGAGGGGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGHGDEG*LEGLVE
Trigger: CTCCACCAGCCCCTCCAGTCAACCCTCATCGCCGTG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCGGACCACAGCCTGTaGCTCGGTGCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPDHSL*LGATWL
Trigger: CAGCCAGGTGGCACCGAGTCACAGGCTGTGGTCCGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGCCACGCCAATGTGGTaGGGCTGCACGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGATPMW*GCTHRT
Trigger: GGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLYARCP*SSPREK
Trigger: CTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAGGTCGTATGCCAGGTaGCCCTGCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRSYAR*PCSSPR
Trigger: CCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGCPPSS*GCYSWA
Trigger: CGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQCPPSS*GCYSWA
Trigger: CGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCATCCATGGCGCTGCTaGGAGGAGGCGAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSHPWRC*EEARPA
Trigger: CGCCGGCCTCGCCTCCTCGCAGCAGCGCCATGGATG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000589123.5
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGACTCATCCATGGCGCTaGTGCGAGGAGGCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGTHPWR*CEEARP
Trigger: CGGCCTCGCCTCCTCGCAGCAGCGCCATGGATGAGT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000589123.5
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTGGCCCTCCAGTCCTaGGGCCTTGGCGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALALQS*GLGVPR
Trigger: TCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTGGCCCTCCAGTCCTaGGGCCTTGGCGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLALQS*GLGVPR
Trigger: TCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTTAACGGTCCAGGTTaGTGGCTGGCTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLFNGPG*WLAGSQ
Trigger: CTGCGACCCAGCCAGCCAGCAACCTGGACCGTTAAA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCTCTGCGGTCTCCGCTaGCCGGCCGGGGTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCLCGLR*PAGVRC
Trigger: ACAGCGGACCCCGGCCGGGCAGCGGAGACCGCAGAG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGGTTGGAGGACAGCCTaGAGTGGGTCGGTGAATGGT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLGWRTA*SGSVNG
Trigger: ACCATTCACCGACCCACTGCAGGCTGTCCTCCAACC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAACCTGGCTGTCCCTGTaGCCTGCCGGACCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESATWLSL*PAGPSA
Trigger: AGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAAACCATCCACAACATaGTGCCTGGTATGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLKPSTT*CLVWAF
Trigger: AAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGAAGGTGGAATTGTCTaGTGCCTGGGGACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFEGGIV*CLGTCR
Trigger: CCTGCAGGTCCCCAGGCAGCAGACAATTCCACCTTC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAACTGGCAACAAGTCCTaGTGGTACTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRTGNKS*WYCFGS
Trigger: GGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGTGGTGGCTTGGGGGTaGATGACTTCCCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGVVAWG*MTSPPG
Trigger: CCCCGGAGGGGAAGTCATGCACCCCCAAGCCACCAC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESAACSH*RRCWAA
Trigger: CGCTGCCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAAACSH*RRCWAA
Trigger: CGCTGCCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGCGCYS*ASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQCGCYS*ASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAGCGGAGGACGGGTGTaGGCTCCGGGCGATCCCGCT +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLISGGRV*APGDPA
Trigger: AGCGGGATCGCCCGGAGCCCACACCCGTCCTCCGCT...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGTCCAGGTTGCTGGCTaGCTGGGTCGCAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESVQVAG*LGRRPA
Trigger: CGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGAC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGTCCAGGTTGCTGGCTaGCTGGGTCGCAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAVQVAG*LGRRPA
Trigger: CGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGAC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGACGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESADGPGC*LAGSQA
Trigger: GGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGTC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341919.7
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGGCGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIGGPGC*LAGSQA
Trigger: GGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGCC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATGGCGTCCCGAGAGTTaGAAACGTTGCGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRWRPES*KRCVFT
Trigger: GGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTAACGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGNGPGC*LAGSQA
Trigger: GGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGTT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAACGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGNGPGC*LAGSQA
Trigger: GGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGTT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTCCCTCGGAGGTGGTaGCGGGTTTGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALPRRW*RVWWQG
Trigger: CCCCTGCCACCAAACCCGCCACCACCTCCGAGGGAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGAGAGGTGGCCTTGCTaGGTGTCGCGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAERWPC*VSRLSA
Trigger: GGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGGGCCCGGGGAGAGGTaGCCTTGCTGGGTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCGPGER*PCWVSR
Trigger: GCGCGACACCCAGCAAGGCCACCTCTCCCCGGGCCC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCAACTCGGGGAGCTCTaGGTGTCCGGGCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGQLGEL*VSGLPH
Trigger: ATGGGGGAGCCCGGACACCCAGAGCTCCCCGAGTTG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGCCTCCTCTCTCCTCTaGGGGCCCAGCCGTGATGCA +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGASSLL*GPSRDA
Trigger: TGCATCACGGCTGGGCCCCCAGAGGAGAGAGGAGGC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGACCTGCCCTGGCTTTaGCCTGGGTCGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSDLPWL*PGSGEG
Trigger: CCCCTCCCCCGACCCAGGCCAAAGCCAGGGCAGGTC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCCCGGAGACCTGCCCTaGCTTTGGCCTGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSPGDLP*LWPGSG
Trigger: CCCCGACCCAGGCCAAAGCCAGGGCAGGTCTCCGGG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATTCCCAGGGCCAAGATaGGCCCCGGAGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQFPGPR*APEVCP
Trigger: AGGACAGACCTCCGGGGCCCATCTTGGCCCTGGGAA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACAGTGGGTCGGTGAATaGTGTCTGGGGGCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAQWVGE*CLGAGP
Trigger: CGGGCCGGCCCCCAGACACCATTCACCGACCCACTG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAGTCTGGCTGCGGGTaGAGTGGCCACCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLESGCG*SGHPMV
Trigger: AACCATGGGGTGGCCACTCCACCCGCAGCCAGACTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGAATGCCACCTGGGGTaGTCTCTGGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRECHLG*SLDRGK
Trigger: TTTTCCCCTATCCAGAGACCACCCCAGGTGGCATTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCGTGGCCAGCTGTGGTaGTCTGGGCTCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRGQLW*SGLSLC
Trigger: ACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGGGGGACCCAGGTCTaGCCCCTAAGCGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESARGTQV*PLSGSP
Trigger: GGGAGAGCCGCTTAGGGGCCAGACCTGGGTCCCCCT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAATTGTCTGCTGCCTaGGGACCTGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLELSAA*GPAGGP
Trigger: GGGTCCCCCTGCAGGTCCCCAGGCAGCAGACAATTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGGCAACAAGTCCTGCTaGTACTGCTTTGGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFGNKSC*YCFGSA
Trigger: GGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCTGTTTTGGTATCACTaGCAACAAGTCCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLFWYH*QQVLLV
Trigger: TACCAGCAGGACTTGTTGCCAGTGATACCAAAACAG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLRGPAP*RPRQCG
Trigger: ACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRGPAP*RPRQCG
Trigger: ACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCGGTCGTGTCCAGCGTaGTGGGCTTGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRSCPA*WACCPP
Trigger: AGGAGGACAGCAAGCCCATCACGCTGGACACGACCG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCGGGTCCTGGGGGTTaGGATGAGGTGGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESAGPGG*DEVGSG
Trigger: TCCGCTACCCACCTCATCTCAACCCCCAGGACCCGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGGACGCTTGCGAAGTaGCGCCCAGCTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESARTLAK*RPALPL
Trigger: GAGGGGCAGAGCTGGGCGTCACTTCGCAAGCGTCCT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGAGGCTAGGAGCAGGTaGGACCCGGAGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESEARSR*DPETCP
Trigger: AGGGCAGGTCTCCGGGTCTCACCTGCTCCTAGCCTC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCTATGTGTGTGCGCTaGTATTGTTTAAAGGTAATA +
Preference number: 4 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHAMCVR*YCLKVI
Trigger: TATTACCTTTAAACAATATCAGCGCACACACATAGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCACGGGATGAGTGTATaGTGGTGGCTGTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLHGMSV*WWLWRP
Trigger: TGGTCTCCACAGCCACCATCATACACTCATCCCGTG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGCTGGGACCCAAGATaGGAGGATGGGGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGWDPR*EDGVWM
Trigger: CATCCACACCCCATCCTCTCATCTTGGGTCCCAGCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCGCGAAAACCAAAATaGCTGCGTAATATACAAGGT +
Preference number: 4 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPRKPK*LRNIQG
Trigger: ACCTTGTATATTACGCAGTCATTTTGGTTTTCGCGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCACTCTCAACTAAGTaGCCACCCACAGCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPLSTK*PPTARR
Trigger: TCGCCGGGCTGTGGGTGGTCACTTAGTTGAGAGTGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGCCACGCCAATGTGGTaGGGCTGCACGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAATPMW*GCTHRT
Trigger: GGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGYARCP*SSPREK
Trigger: CTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGGTCGTATGCCAGGTaGCCCTGCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESARSYAR*PCSSPR
Trigger: CCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGGTCGTATGCCAGGTaGCCCTGCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRSYAR*PCSSPR
Trigger: CCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPSSCG*YSWASW
Trigger: CCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGCPPSS*GCYSWA
Trigger: CGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCAGGACGGTCCAGGTTaGTGGCTGGCTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESQDGPG*WLAGSQ
Trigger: CTGCGACCCAGCCAGCCAGCAACCTGGACCGTCCTG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341919.7
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGCCGGGGGCCGGCTGTaGTGCCCCCTGGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGAGGRL*CPLGFL
Trigger: CAGGAATCCCAGGGGGCAGCACAGCCGGCCCCCGGC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGTAGGCGGTCCAGGTTaGTGGCTGGCTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAVGGPG*WLAGSQ
Trigger: CTGCGACCCAGCCAGCCAGCAACCTGGACCGCCTAC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR GCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACGTAGGCGGTCCAGGTTaGTGGCTGGCTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDVGGPG*WLAGSQ
Trigger: CTGCGACCCAGCCAGCCAGCAACCTGGACCGCCTAC...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCCCGGGGGCGGAGGTaGCAGCATCTGAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPRGRR*QHLSRK
Trigger: CTTTCTGCTCAGATGCTGGCACCTCCGCCCCCGGGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGGGAGAGGTGGCCTTaGTGGGTGTCGCGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSGERWP*WVSRLS
Trigger: CGACAGGCGCGACACCCAGCAAGGCCACCTCTCCCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTCGAGGGGCAGCAGGTaGCTGGGCCTCACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSRGSR*LGLTSS
Trigger: GGAGGAAGTGAGGCCCAGGCACCTGCTGCCCCTCGA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGGGCCGGGGCCAATTaGATAGAGACTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGAGAN*IETSPP
Trigger: GGGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGGGCCGGGGCCAATTaGATAGAGACTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGAGAN*IETSPP
Trigger: GGGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCAGTGACGCCCAGCTCTaGCCCTCGGGCCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCSDAQL*PSGHAG
Trigger: CCCTGCGTGGCCCGAGGGGCAGAGCTGGGCGTCACT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGGTGGAACTCATCCTaGGTGAGGCAGAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGWNSS*VRQSGD
Trigger: GTCCCCGCTCTGCCTCACCCAGGATGAGTTCCACCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000341919.7
ENST00000443272.3
CDS-3UTR CCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCGGGTGGAACTCATCCTaGGTGAGGCAGAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTGWNSS*VRQSGD
Trigger: GTCCCCGCTCTGCCTCACCCAGGATGAGTTCCACCC...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGACGGCCACGCCAATGTaGTGCGGCTGCACGCACAGG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESTATPM*CGCTHR
Trigger: CCTGTGCGTGCAGCCGCACCACATTGGCGTGGCCGT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGTGACAAAGCTCTCCTaGAAGTCGGTCGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLVTKLS*KSVVSS
Trigger: GCTGGACACGACCGACTTCCAGGAGAGCTTTGTCAC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGAGGCCAGTGCTGGCTaGGTTCAGGTCGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGEASAG*VQVVCQ
Trigger: CTGGCATACGACCTGAACCCAGCCAGCACTGGCCTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTACTCGTGGGCGAGCTaGGCGAAGTGTAGTAATCGC +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFYSWAS*AKCSNR
Trigger: GCGATTACTACACTTCGCCCAGCTCGCCCACGAGTA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCAGCGGAGGACGGGTGTaGGCTCCGGGCGATCCCGCT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCSGGRV*APGDPA
Trigger: AGCGGGATCGCCCGGAGCCCACACCCGTCCTCCGCT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTGTGGGGGAAGTAGGTaGAGGCCGTCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLCGGSR*RPSGVG
Trigger: TCCTACCCCAGACGGCCTCCACCTACTTCCCCCACA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGGTTGCTGGCTGGCTaGGTCGCAGGCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRLLAG*VAGQRD
Trigger: GTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACAGGTTGCTGGCTGGCTaGGTCGCAGGCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYRLLAG*VAGQRD
Trigger: GTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCT...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGAGGTTGCTGGCTGGCTaGGTCGCAGGCCAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQRLLAG*VAGQRD
Trigger: GTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCT...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGTCCAGGTTGCTGGCTaGCTGGGTCGCAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIVQVAG*LGRRPA
Trigger: CGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGAC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGTTTCCACCGAAAACGTaGGCCGGGGGCCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQFPPKT*AGGRLC
Trigger: GCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAAA...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCCAGTCCTGCGGCCTTaGCGTCCCGAGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLPVLRP*RPESWK
Trigger: TTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCTCCCTCGGAGGTGGTaGCGGGTTTGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLPRRW*RVWWQG
Trigger: CCCCTGCCACCAAACCCGCCACCACCTCCGAGGGAG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTCCTCCCTCGGAGGTaGTGGCGGGTTTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALLPRR*WRVWWQ
Trigger: CTGCCACCAAACCCGCCACCACCTCCGAGGGAGGAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCAGGCTGTGCTCACCTaGTCTCCGGACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGQAVLT*SPDRAR
Trigger: CCTGGCTCTGTCCGGAGACCAGGTGAGCACAGCCTG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCGCGCCTGTCGGCCCTaGGCACAGGCTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCRACRP*AQAPGC
Trigger: ACAGCCTGGAGCCTGTGCCCAGGGCCGACAGGCGCG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGAGAGGTGGCCTTGCTaGGTGTCGCGCCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSERWPC*VSRLSA
Trigger: GGCCGACAGGCGCGACACCCAGCAAGGCCACCTCTC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCAACTCGGGGAGCTCTaGGTGTCCGGGCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESQLGEL*VSGLPH
Trigger: ATGGGGGAGCCCGGACACCCAGAGCTCCCCGAGTTG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCCTCCTCTCTCCTCTaGGGGCCCAGCCGTGATGCA +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESASSLL*GPSRDA
Trigger: TGCATCACGGCTGGGCCCCCAGAGGAGAGAGGAGGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCCACGACCCCCACCCTaGCTGAGAAGCTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGPRPPP*LRSFRT
Trigger: TGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTCGTGG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTTCCCAGGGCCAAGATaGGCCCCGGAGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGFPGPR*APEVCP
Trigger: AGGACAGACCTCCGGGGCCCATCTTGGCCCTGGGAA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTGGCCACCCCATGGTTaGAGGACAGCCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGWPPHG*RTACSG
Trigger: CCCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCCAGCTGTGGTGGTCTaGGCTCTCCCTCTGTATCGC +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGPAVVV*ALPLYR
Trigger: GCGATACAGAGGGAGAGCCCAGACCACCACAGCTGG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATTCTTTCCCACAGCATaGGCAGACCCCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRFFPTA*ADPRMR
Trigger: TCTCATTCTGGGGTCTGCCCATGCTGTGGGAAAGAA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCTGGGGTCAGAACCTaGGTTCCAGACCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPGVRT*VPDLGM
Trigger: CATGCCCAGGTCTGGAACCCAGGTTCTGACCCCAGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTCTTGCAAGGGACAGTaGGGTGCAGCCAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFSCKGQ*GAAKSV
Trigger: GACAGACTTGGCTGCACCCCACTGTCCCTTGCAAGA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCCATCCTGTCCCCCTaGAGCCCTTGCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPILSP*SPCLFF
Trigger: AAAGAACAAGCAAGGGCTCCAGGGGGACAGGATGGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGGGTGGGGGACCTGCTaGAACCTTCTCCGGATTGGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGGWGTC*NLLRIG
Trigger: CCCAATCCGGAGAAGGTTCCAGCAGGTCCCCCACCC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTAGGAGGAGGGGAGGGTaGGGGACCTGCTGGAACCTT +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRRRGG*GTCWNL
Trigger: AAGGTTCCAGCAGGTCCCCCACCCTCCCCTCCTCCT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGAACTCATCCTGGGTaGGGCAGAGCGGGGACGAAT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGTHPG*GRAGTN
Trigger: ATTCGTCCCCGCTCTGCCTCACCCAGGATGAGTTCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000341919.7
ENST00000443272.3
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLRTAQP*PGARRR
Trigger: CCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGGTCGTGTCCAGCGTaGTGGGCTTGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRSCPA*WACCPP
Trigger: AGGAGGACAGCAAGCCCATCACGCTGGACACGACCG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCGCTGTGCACGGCGATaGCGGGCCGGTGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLRCARR*RAGGAG
Trigger: CCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGCGGGTCCTGGGGGTTaGGATGAGGTGGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSAGPGG*DEVGSG
Trigger: TCCGCTACCCACCTCATCTCAACCCCCAGGACCCGC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGCGGGTCCTGGGGGTTaGGATGAGGTGGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIAGPGG*DEVGSG
Trigger: TCCGCTACCCACCTCATCTCAACCCCCAGGACCCGC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGGAGGTGCCAGCATCTaGGCAGAAAGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGGGASI*AERQWL
Trigger: CAGCCACTGCCTTTCTGCTCAGATGCTGGCACCTCC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCACGGCGATGAGGGTTaGCTGGAGGGGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSHGDEG*LEGLVE
Trigger: CTCCACCAGCCCCTCCAGTCAACCCTCATCGCCGTG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGTCGGGGTAGGCGATaGAAGTGCAAACGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRRGRR*KCKRRS
Trigger: GGACCGCCGTTTGCACTTTCATCGCCTACCCCGACG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCTGGGGGCCCAGCCGTaGTGCACGTCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLLGAQP*CTSRSW
Trigger: CCAGCTGCGGGACGTGCATCACGGCTGGGCCCCCAG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGAGCGGCCCACGCTTTaGTCCCCAAGGGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGERPTL*SPRATG
Trigger: CCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAGGGGCTGGAGGTGGTaGGGGCTGCAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSRGWRW*GLQEWP
Trigger: AGGCCATTCCTGCAGCCCTCACCACCTCCAGCCCCT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCGGCGCTCGCCGTCGGTaGTCTCCAGCGGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: EGRRPLLSQIPGLCLINAGARRR*SPAGCP
Trigger: AGGGCATCCCGCTGGAGAGCACCGACGGCGAGCGCC...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGCCACGCCAATGTGGTaGGGCTGCACGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIATPMW*GCTHRT
Trigger: GGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTCCCTGTCCGGGGACTaGCGCTTTGCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGSLSGD*RFALHL
Trigger: GAGATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCTCCCTGTCCGGGGACTaGCGCTTTGCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTSLSGD*RFALHL
Trigger: GAGATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGA...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAYARCP*SSPREK
Trigger: CTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDYARCP*SSPREK
Trigger: CTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATA...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACTATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYYARCP*SSPREK
Trigger: CTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATA...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESCPPSS*GCYSWA
Trigger: CGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLDVVGK*RAEDGC
Trigger: ACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGGGGGCCGGCTGTGCTaGCCCCTGGGATTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINGGRLC*PLGFLG
Trigger: TCCCAGGAATCCCAGGGGGCAGCACAGCCGGCCCCC...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCCACAAAGGAACGGTTTaGAGGGGACGTGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTHKGTV*RGRVGR
Trigger: CCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTG...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCACAAAGGAACGGTTTaGAGGGGACGTGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGHKGTV*RGRVGR
Trigger: CCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCAGATACCAGGACTGTaGCTGATAAATGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFQIPGL*LINARR
Trigger: CCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTACAGGCTCCAGGCTGTaGTCACCTGGTCTCCGGACA +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGTGSRL*SPGLRT
Trigger: TGTCCGGAGACCAGGTGAGCACAGCCTGGAGCCTGT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAGGGATAGTCTGCCATaGATGTGTGTCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRDSLP*MCVSAA
Trigger: GGCGGCGCTGACACACATGCATGGCAGACTATCCCT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGGTTGGAGGACAGCCTaGAGTGGGTCGGTGAATGGT +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVGWRTA*SGSVNG
Trigger: ACCATTCACCGACCCACTGCAGGCTGTCCTCCAACC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAAGGTGGGAGAGAATaGCACCTGGGGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLEGGRE*HLGWSL
Trigger: CAGAGACCACCCCAGGTGGCATTCTCTCCCACCTTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGCTGTCCCTGTGCCCTaGCGGACCCTCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLAVPVP*RTLGWA
Trigger: GGCCCAGCCGAGGGTCCGGCAGGGCACAGGGACAGC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCACCTGGCTGTCCCTGTaGCCTGCCGGACCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCTWLSL*PAGPSA
Trigger: AGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCAGCCTGTGACTCGGTaGCACCTGGCTGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESQPVTR*HLAVPV
Trigger: CACAGGGACAGCCAGGTGGCACCGAGTCACAGGCTG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTCCTCCCTGCCTGGCTaGCCCACTAACCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGSSLPG*PTNHLA
Trigger: AGCCAGATGGTTAGTGGGGCAGCCAGGCAGGGAGGA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTATGAATGGGACCATCTaGGTGGGTCCCTACACGAGA +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLMNGTI*VGPYTR
Trigger: TCTCGTGTAGGGACCCACGCAGATGGTCCCATTCAT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGTATGGGCTTTTGCCTaGTGTACTCAGCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLVWAFA*CTQPRC
Trigger: GCACCTTGGCTGAGTACAGCAGGCAAAAGCCCATAC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACAAGGGACAGTGGGGTaGAGCCAAGTCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQQGTVG*SQVCLC
Trigger: GCACAGACAGACTTGGCTGCACCCCACTGTCCCTTG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCAAGGGACAGTGGGGTaGAGCCAAGTCTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGQGTVG*SQVCLC
Trigger: GCACAGACAGACTTGGCTGCACCCCACTGTCCCTTG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTCCTCACCTTGCCCTaGCGGGAGGTCAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLLTLP*REVKGG
Trigger: ACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTCCTCACCTTGCCCTaGCGGGAGGTCAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALLTLP*REVKGG
Trigger: ACCACCCTTGACCTCCCGGCAGGGCAAGGTGAGGAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGTGGTGGCTTGGGGGTaGATGACTTCCCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSVVAWG*MTSPPG
Trigger: CCCCGGAGGGGAAGTCATGCACCCCCAAGCCACCAC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGTGTCCGGGACACTTaGATGAGCTCAGTGACGCTG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGVRDT*MSSVTL
Trigger: CAGCGTCACTGAGCTCATCCAAGTGTCCCGGACACC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGGTGTCCGGGACACTTaGATGAGCTCAGTGACGCTG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVGVRDT*MSSVTL
Trigger: CAGCGTCACTGAGCTCATCCAAGTGTCCCGGACACC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGTGTCCGGGACACTTaGATGAGCTCAGTGACGCTG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGVRDT*MSSVTL
Trigger: CAGCGTCACTGAGCTCATCCAAGTGTCCCGGACACC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGAGGCCAGTGCTGGCTaGGTTCAGGTCGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGEASAG*VQVVCQ
Trigger: CTGGCATACGACCTGAACCCAGCCAGCACTGGCCTC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCGAGGCCAGTGCTGGCTaGGTTCAGGTCGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTEASAG*VQVVCQ
Trigger: CTGGCATACGACCTGAACCCAGCCAGCACTGGCCTC...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAAGCCGCTTGCTCCCACTaGAGGAGGTGCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKAACSH*RRCWAA
Trigger: CGCTGCCCAGCACCTCCTCCAGTGGGAGCAAGCGGC...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESACGCYS*ASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACTGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYCGCYS*ASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCA...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGGCGGGGAGAGTCCTaGGGGGACGGGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRRGES*GDGLLN
Trigger: ATTCAACAGCCCGTCCCCCCAGGACTCTCCCCGCCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGAGGCGGGGAGAGTCCTaGGGGGACGGGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQRRGES*GDGLLN
Trigger: ATTCAACAGCCCGTCCCCCCAGGACTCTCCCCGCCT...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAAACGGGCCGGTGGTGCTaGGTGAAGCTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKTGRWC*VKLERR
Trigger: CCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGT...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGAGGTGGGTAGCGGATaGCCGTGTGGGGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAEVGSG*PCGGSR
Trigger: CCTACTTCCCCCACACGGCCATCCGCTACCCACCTC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGAGGTGGGTAGCGGATaGCCGTGTGGGGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQEVGSG*PCGGSR
Trigger: CCTACTTCCCCCACACGGCCATCCGCTACCCACCTC...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACGGTGGAACTCATCCATaGCGCTGCTGCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYGGTHP*RCCEEA
Trigger: CGCCTCCTCGCAGCAGCGCCATGGATGAGTTCCACC...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCCCAGTCCTGCGGCCTTaGCGTCCCGAGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTPVLRP*RPESWK
Trigger: TTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGG...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACAGGCTGTGCTCACCTaGTCTCCGGACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAQAVLT*SPDRAR
Trigger: CCTGGCTCTGTCCGGAGACCAGGTGAGCACAGCCTG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGTGGGTCCCTCCCTTTaGGGGTGTGAGCCGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCVGPSL*GCEPGE
Trigger: CTCGCCCGGCTCACACCCCCAAAGGGAGGGACCCAC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTTCCGGACACCCCAATaGCACAACCCGACCACCCCC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESFRTPQ*HNPTTP
Trigger: GGGGGTGGTCGGGTTGTGCCATTGGGGTGTCCGGAA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTAGGACAGCCAGGGGCTaGGTAGACCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRTARG*VDLGAI
Trigger: AATTGCCCCCAGGTCTACCCAGCCCCTGGCTGTCCT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGAGGACAGCCTGCAGTaGGTCGGTGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVEDSLQ*VGEWCL
Trigger: CAGACACCATTCACCGACCCACTGCAGGCTGTCCTC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGGCTGCGGGTGGAGTaGCCACCCCATGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSWLRVE*PPHGWR
Trigger: CCTCCAACCATGGGGTGGCCACTCCACCCGCAGCCA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGAGAGAATGCCACCTaGGGTGGTCTCTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGENAT*GGLWIG
Trigger: CCCTATCCAGAGACCACCCCAGGTGGCATTCTCTCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCTGCAGCAAGGCGCCTaGGAATTTTGCCCTACAGGG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVLQQGA*EFCPTG
Trigger: CCCTGTAGGGCAAAATTCCCAGGCGCCTTGCTGCAG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGTGCCCCCACGGAATaGGGACAATTTGCATATATT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGAPTE*GQFAYI
Trigger: AATATATGCAAATTGTCCCCATTCCGTGGGGGCACC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCCAGGGTGGGGCCCTaGGGTCAGAACCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCPRVGP*GQNLGS
Trigger: GGAACCCAGGTTCTGACCCCAGGGCCCCACCCTGGG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGAGGTCAAGGGTGGTaGACTGACCCCACACTCTGT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGGQGW*TDPTLC
Trigger: ACAGAGTGTGGGGTCAGTCCACCACCCTTGACCTCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCTGCTGGTACTGCTTTaGGTCCGCCTCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVLLVLL*VRLLTL
Trigger: CAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTACGCACAGGACCGGGTaGCCGCACTGCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGTHRTG*PHCAAL
Trigger: CAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESARGPAP*RPRQCG
Trigger: ACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQRGPAP*RPRQCG
Trigger: ACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCT...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRGPAP*RPRQCG
Trigger: ACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAAGCGGGTCCTGGGGGTTaGGATGAGGTGGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKAGPGG*DEVGSG
Trigger: TCCGCTACCCACCTCATCTCAACCCCCAGGACCCGC...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGCGGGTCCTGGGGGTTaGGATGAGGTGGGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCAGPGG*DEVGSG
Trigger: TCCGCTACCCACCTCATCTCAACCCCCAGGACCCGC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGAGGCTAGGAGCAGGTaGGACCCGGAGACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCEARSR*DPETCP
Trigger: AGGGCAGGTCTCCGGGTCTCACCTGCTCCTAGCCTC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGTTCTCGTCGCGCCCTaGCCCCTCTGGAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLVLVAP*PLWSPA
Trigger: AGCCGGGCTCCAGAGGGGTCAGGGCGCGACGAGAAC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGAGAGGGGGTGCCTCTaGGGTGGGTGTGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSERGCL*GGCGTA
Trigger: TGCTGTTCCACACCCACCTCAGAGGCACCCCCTCTC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGGGAGGCTGCTGAGGTaGCTTTTTGGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFGRLLR*LFGRKH
Trigger: GTGTTTTCTTCCAAAAAGTCACCTCAGCAGCCTCCC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGCCTGGGGAGGCTGCTaGGGTGACTTTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQAWGGC*GDFLEE
Trigger: TTCTTCCAAAAAGTCACCTCAGCAGCCTCCCCAGGC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCGGCACCCCCTTTTGTaGACCCAAACTGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRHPLL*TQTAEM
Trigger: CATCTCTGCAGTTTGGGTTCACAAAAGGGGGTGCCG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCGGAGGAAGCTGGATTaGGAGATGTATGTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGRRKLD*EMYVPA
Trigger: CGCTGGGACATACATCTCTCAATCCAGCTTCCTCCG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGCACCCGGCTTCCATaGTGCCGTCACACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSGTRLP*CRHTSS
Trigger: GCTGCTTGTGTGACGGCATCATGGAAGCCGGGTGCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGCGCTCGCCGTCGGTaGTCTCCAGCGGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLGARRR*SPAGCP
Trigger: AGGGCATCCCGCTGGAGAGCACCGACGGCGAGCGCC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAAAGGTCGTATGCCAGGTaGCCCTGCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKRSYAR*PCSSPR
Trigger: CCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCT...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGATCGAGCCCGATTTGTaGCGCTTGCTCCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGIEPDL*RLLPLE
Trigger: CTCCAGTGGGAGCAAGCGGCACAAATCGGGCTCGAT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCCCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRRPLLSQIPGLCLINARPSSCG*YSWASW
Trigger: CCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGG...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACACAAAGGAACGGTTTaGAGGGGACGTGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAHKGTV*RGRVGR
Trigger: CCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCTGGCCCTCCAGTCCTaGGGCCTTGGCGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGLALQS*GLGVPR
Trigger: TCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCAG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGCTGTCCCTGTGCCCTaGCGGACCCTCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCAVPVP*RTLGWA
Trigger: GGCCCAGCCGAGGGTCCGGCAGGGCACAGGGACAGC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTACCTGGCTGTCCCTGTaGCCTGCCGGACCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGTWLSL*PAGPSA
Trigger: AGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTCCTCCCTGCCTGGCTaGCCCACTAACCATCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSSLPG*PTNHLA
Trigger: AGCCAGATGGTTAGTGGGGCAGCCAGGCAGGGAGGA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCCCGGGTGTGGGCTGTaGAGGGACGCGATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGPGCGL*RDAMVP
Trigger: TGGGACCATCGCGTCCCTGCACAGCCCACACCCGGG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTGTACTCAGCCAAGGTaGCAAGTGAGCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVCTQPR*QVSQGG
Trigger: GCCTCCTTGGCTCACTTGGCACCTTGGCTGAGTACA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATGTACTCAGCCAAGGTaGCAAGTGAGCCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQCTQPR*QVSQGG
Trigger: GCCTCCTTGGCTCACTTGGCACCTTGGCTGAGTACA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGGGTCATTGTCAGGTaGCCCCACGGAATGGGGACA +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRVIVR*PHGMGT
Trigger: TGTCCCCATTCCGTGGGGGCACCTGACAATGACCCG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTTCCTACTCCTCCATaGCCCATCTCCACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLPTPP*PISTRV
Trigger: GACCCGGGTGGAGATGGGGCATGGAGGAGTAGGAAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCTGTGCCTGGAATGCTaGTGTCTCTCAAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLLCLEC*CLSRSW
Trigger: CCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGTGTCCGGGACACTTaGATGAGCTCAGTGACGCTG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGVRDT*MSSVTL
Trigger: CAGCGTCACTGAGCTCATCCAAGTGTCCCGGACACC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCACGGGCCGGTGGTGCTaGGTGAAGCTGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EGRRPLLSQIPGLCLINATGRWC*VKLERR
Trigger: CCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGT...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATGTGGGGGAAGTAGGTaGAGGCCGTCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESACGGSR*RPSGVG
Trigger: TCCTACCCCAGACGGCCTCCACCTACTTCCCCCACA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGGGGGAAGTAGGTaGAGGCCGTCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDCGGSR*RPSGVG
Trigger: TCCTACCCCAGACGGCCTCCACCTACTTCCCCCACA...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGTTGAGATGAGGTaGGTAGCGGATGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAGVEMR*VADGRV
Trigger: CACACGGCCATCCGCTACCCACCTCATCTCAACCCC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGGGGTTGAGATGAGGTaGGTAGCGGATGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQGVEMR*VADGRV
Trigger: CACACGGCCATCCGCTACCCACCTCATCTCAACCCC...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGTCCAGGTTGCTGGCTaGCTGGGTCGCAGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINVQVAG*LGRRPA
Trigger: CGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGAC...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGTCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCTCCTCCCTCGGAGGTaGTGGCGGGTTTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCLLPRR*WRVWWQ
Trigger: CTGCCACCAAACCCGCCACCACCTCCGAGGGAGGAG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGCACGTCCCGCAGCTaGGCCCCGCGTCGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCCTSRS*APRRGR
Trigger: CCTACCCCGACGCGGGGCCCAGCTGCGGGACGTGCA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGATGGGGGAGGGTCCTaGGTCTTTCTCTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQDGGGS*VFLFRS
Trigger: GCTCCTAAAGAGAAAGACCCAGGACCCTCCCCCATC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACTTCATATTCACAGCTaGAAGACAGAGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLHIHS*KTETGD
Trigger: ATCCCCTGTCTCTGTCTTCCAGCTGTGAATATGAAG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAATGGGACCATCTGCGTaGGTCCCTACACGAGATGCT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQMGPSA*VPTRDA
Trigger: AGCATCTCGTGTAGGGACCCACGCAGATGGTCCCAT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGATGGGACCATCTGCGTaGGTCCCTACACGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLMGPSA*VPTRDA
Trigger: AGCATCTCGTGTAGGGACCCACGCAGATGGTCCCAT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGCTGAGGTGACTTTTTaGAAGAAAACACGGGATGAG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRAEVTF*KKTRDE
Trigger: CTCATCCCGTGTTTTCTTCCAAAAAGTCACCTCAGC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCGTGGCCAGCTGTGGTaGTCTGGGCTCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSRGQLW*SGLSLC
Trigger: ACAGAGGGAGAGCCCAGACCACCACAGCTGGCCACG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTTAAGGGCAATGTCGTaGCCAGCTGTGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLLRAMS*PAVVVW
Trigger: CCAGACCACCACAGCTGGCCACGACATTGCCCTTAA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATTGCTCCTAGTTCCTTaGCAAGACAGATTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRLLLVP*QDRFAQ
Trigger: CTGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTCCAGCCCAGGACTCTaGGCCCCCGGGTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLSSPGL*APGCGL
Trigger: CAGCCCACACCCGGGGGCCCAGAGTCCTGGGCTGGA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCTGCAGCAAGGCGCCTaGGAATTTTGCCCTACAGGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGLQQGA*EFCPTG
Trigger: CCCTGTAGGGCAAAATTCCCAGGCGCCTTGCTGCAG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGCTTGCTGTCTCTTCTaGAGGGCTGGACAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQACCLF*RAGQLL
Trigger: GAGCAACTGTCCAGCCCTCCAGAAGAGACAGCAAGC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCTGACGTGGCAGAAATaGGGCAAGATGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVLTWQK*GKMGGC
Trigger: GCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCATGTGCGTGGAAGGCTaGGGGGTGGTGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCMCVEG*GVVAWG
Trigger: CCCCCAAGCCACCACCCCCCAGCCTTCCACGCACAT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAGGAGGAGGGGAGGGTaGGGGACCTGCTGGAACCTT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSRRRGG*GTCWNL
Trigger: AAGGTTCCAGCAGGTCCCCCACCCTCCCCTCCTCCT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGATTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCTGGGCATTTTGAGCTaGCCACTTCCATTTAACGGT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLLGILS*PLPFNG
Trigger: ACCGTTAAATGGAAGTGGTCAGCTCAAAATGCCCAG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCACGGCGATGAGGGTTaGCTGGAGGGGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGHGDEG*LEGLVE
Trigger: CTCCACCAGCCCCTCCAGTCAACCCTCATCGCCGTG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGTCGCAGGAGTCCTTaGCTAAGCACCATGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGRRSP*LSTMQS
Trigger: ACTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTAGGGGCTGGAGGTGGTaGGGGCTGCAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGRGWRW*GLQEWP
Trigger: AGGCCATTCCTGCAGCCCTCACCACCTCCAGCCCCT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGAAGAAAACACGGGATaGGTGTATGATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLEENTG*VYDGGC
Trigger: ACAGCCACCATCATACACTCATCCCGTGTTTTCTTC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCACACTCTGTACCATTaGGCAATGGATGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGHTLYH*AMDGQR
Trigger: CCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGCTGGGACCCAAGATaGGAGGATGGGGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSGWDPR*EDGVWM
Trigger: CATCCACACCCCATCCTCTCATCTTGGGTCCCAGCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGCACAGTTGCCATTTaGCCGAGGTCTCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSTVAI*PRSLPA
Trigger: AGCCGGGAGAGACCTCGGTCAAATGGCAACTGTGCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCGCCACGCCAATGTGGTaGGGCTGCACGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: EGRRPLLSQIPGLCLINAATPMW*GCTHRT
Trigger: GGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGC...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGATCGAGCCCGATTTGTaGCGCTTGCTCCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQIEPDL*RLLPLE
Trigger: CTCCAGTGGGAGCAAGCGGCACAAATCGGGCTCGAT...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATCCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINPSSCG*YSWASW
Trigger: CCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGG...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCTGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRRPLLSQIPGLCLINARCPPSS*GCYSWA
Trigger: CGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACA...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESADVVGK*RAEDGC
Trigger: ACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TCCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGT +
Preference number: 4 (lower is better)
Translates to: SWDDGEGAREEDLCYPRYDVVGK*RAEDGC
Trigger: ACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTC...GTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGT +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDDVVGK*RAEDGC
Trigger: ACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTC...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGAC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLREEDL*YPRYQD
Trigger: GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLTVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQTVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATTTAACGGTCCAGGTTaGTGGCTGGCTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAFNGPG*WLAGSQ
Trigger: CTGCGACCCAGCCAGCCAGCAACCTGGACCGTTAAA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTACAGGCTCCAGGCTGTaGTCACCTGGTCTCCGGACA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSTGSRL*SPGLRT
Trigger: TGTCCGGAGACCAGGTGAGCACAGCCTGGAGCCTGT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGGGCCGGGGCCAATTaGATAGAGACTTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSGAGAN*IETSPP
Trigger: GGGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGGTTGGAGGACAGCCTaGAGTGGGTCGGTGAATGGT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESGWRTA*SGSVNG
Trigger: ACCATTCACCGACCCACTGCAGGCTGTCCTCCAACC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGACAAGACAACAGCATaGTCAGCCACCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGDKTTA*SATGPQ
Trigger: CTGTGGTCCGGTGGCTGAGCATGCTGTTGTCTTGTC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACCATCCACAACATGCTaGCTGGTATGGGCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQPSTTC*LVWAFA
Trigger: GGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTATGGGCACGGAATCCTaGTTCCTGGTGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLMGTES*FLVFLS
Trigger: AGACAAAAACACCAGGAAGCAGGATTCCGTGCCCAT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCGGGTCATTGTCAGGTaGCCCCACGGAATGGGGACA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSRVIVR*PHGMGT
Trigger: TGTCCCCATTCCGTGGGGGCACCTGACAATGACCCG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCTTCCTACTCCTCCATaGCCCATCTCCACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLPTPP*PISTRV
Trigger: GACCCGGGTGGAGATGGGGCATGGAGGAGTAGGAAG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAAGCCAAGTCTGTCTGTaGCTGGAATGCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQSQVCL*LECCCL
Trigger: GAGACAGCAGCATTCCAGGCACAGACAGACTTGGCT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGCAAGATGGGAGGATaGGGAGGAAGCTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGKMGG*GGSWIE
Trigger: CTCAATCCAGCTTCCTCCGCATCCTCCCATCTTGCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCACTGGCAACAAGTCCTaGTGGTACTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGTGNKS*WYCFGS
Trigger: GGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAAGACATGTGAGGCACTaGTTGGGAAAAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRRHVRH*LGKVCF
Trigger: AAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGAGAGCCGGCGGGTCTaGCCAGGTGTCCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLESRRV*PGVPLS
Trigger: GGACAAGGGGACACCTGGGCAGACCCGCCGGCTCTC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCAGGAGGGCTTGGGATaGGTTAATGTGAGACACACC +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGQEGLG*VNVRHT
Trigger: GGTGTGTCTCACATTAACGCATCCCAAGCCCTCCTG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGTGACAAAGCTCTCCTaGAAGTCGGTCGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGVTKLS*KSVVSS
Trigger: GCTGGACACGACCGACTTCCAGGAGAGCTTTGTCAC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGGTGTCCGGGACACTTaGATGAGCTCAGTGACGCTG +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESGVRDT*MSSVTL
Trigger: CAGCGTCACTGAGCTCATCCAAGTGTCCCGGACACC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCCCCAGGGAGAAGTTaGGTCCTGTTCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPPGRS*VLFQSP
Trigger: TGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCAGGCGGGGAGAGTCCTaGGGGGACGGGCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: GRRPLLSQIPGLCLINARRRGES*GDGLLN
Trigger: ATTCAACAGCCCGTCCCCCCAGGACTCTCCCCGCCT...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGTGGGGGAAGTAGGTaGAGGCCGTCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSCGGSR*RPSGVG
Trigger: TCCTACCCCAGACGGCCTCCACCTACTTCCCCCACA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGAGGTGGGTAGCGGATaGCCGTGTGGGGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCEVGSG*PCGGSR
Trigger: CCTACTTCCCCCACACGGCCATCCGCTACCCACCTC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGCGAGGTCGGCGACGTaGCTCCTCCCTCGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCARSAT*LLPRRW
Trigger: CCACCTCCGAGGGAGGAGCCACGTCGCCGACCTCGC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAAAACGCTTAGCAGATaGGAGGCCCCCTACACGGCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGKTLSR*EAPYTA
Trigger: AGCCGTGTAGGGGGCCTCCCATCTGCTAAGCGTTTT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCCGGAGACCTGCCCTaGCTTTGGCCTGGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPGDLP*LWPGSG
Trigger: CCCCGACCCAGGCCAAAGCCAGGGCAGGTCTCCGGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCACGACCCCCACCCTaGCTGAGAAGCTTCCGGACA +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCPRPPP*LRSFRT
Trigger: TGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTCGTGG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCTGGGGGCCGGCCCGTaGCCTAGGGACCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLLGAGP*PRDQSE
Trigger: CTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGCCTGCATGAAAAGTaGGGAGCGGGGAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSLHEK*GAGSLA
Trigger: AGCCAGACTCCCCGCTCCCCACTTTTCATGCAGGCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAATGCCACCTGGGGTaGTCTCTGGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLECHLG*SLDRGK
Trigger: TTTTCCCCTATCCAGAGACCACCCCAGGTGGCATTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTGTCGTGGCCAGCTGTaGTGGTCTGGGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCCRGQL*WSGLSL
Trigger: GAGGGAGAGCCCAGACCACCACAGCTGGCCACGACA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTGCAGCAAGGCGCCTaGGAATTTTGCCCTACAGGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALQQGA*EFCPTG
Trigger: CCCTGTAGGGCAAAATTCCCAGGCGCCTTGCTGCAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCCCAAACTGCAGAGATaGGCACGGAATCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGPKLQR*ARNPAS
Trigger: GGAAGCAGGATTCCGTGCCCATCTCTGCAGTTTGGG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTAAGTCTGTCTGTGCCTaGAATGCTGCTGTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFKSVCA*NAAVSQ
Trigger: TTGAGAGACAGCAGCATTCCAGGCACAGACAGACTT...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGCTTGCTGTCTCTTCTaGAGGGCTGGACAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGACCLF*RAGQLL
Trigger: GAGCAACTGTCCAGCCCTCCAGAAGAGACAGCAAGC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAGAAATGGGGCAAGATaGGAGGATGCGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRNGAR*EDAEEA
Trigger: AGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGTACCATTGAGCAATaGATGGGCAGCGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLCTIEQ*MGSGVI
Trigger: AATGACACCGCTGCCCATCCATTGCTCAATGGTACA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCGGGAGGTCAAGGGTaGTGGACTGACCCCACACTC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCPGGQG*WTDPTL
Trigger: GAGTGTGGGGTCAGTCCACCACCCTTGACCTCCCGG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTGCTGGTACTGCTTTaGGTCCGCCTCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALLVLL*VRLLTL
Trigger: CAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCCCATCCTGTCCCCCTaGAGCCCTTGCTTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGPILSP*SPCLFF
Trigger: AAAGAACAAGCAAGGGCTCCAGGGGGACAGGATGGG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 72 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTaGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRE*ETLRLYLLSSC
Trigger: GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAAGGAACTCATCCTGGGTaGGGCAGAGCGGGGACGAAT +
Preference number: 4 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKGTHPG*GRAGTN
Trigger: ATTCGTCCCCGCTCTGCCTCACCCAGGATGAGTTCC...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590282.5
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCACGCACAGGACCGGGTaGCCGCACTGCGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCTHRTG*PHCAAL
Trigger: CAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGGTCGTGTCCAGCGTaGTGGGCTTGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EGRRPLLSQIPGLCLINARSCPA*WACCPP
Trigger: AGGAGGACAGCAAGCCCATCACGCTGGACACGACCG...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAACGGGCTGTTGAATGGTaGCTTGTCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRAVEW*LVHLCL
Trigger: AAGACAGAGATGGACAAGTCACCATTCAACAGCCCG...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGACCCCCACCCTGGCTaGGAAGCTTCCGGACACCCC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCDPHPG*EASGHP
Trigger: GGGGTGTCCGGAAGCTTCTCAGCCAGGGTGGGGGTC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACGGAGGAAGCTGGATTaGGAGATGTATGTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESARRKLD*EMYVPA
Trigger: CGCTGGGACATACATCTCTCAATCCAGCTTCCTCCG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTACACCAGCAGACATGTaGGGCACTGCTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGTPADM*GTAWEK
Trigger: CTTTTCCCAAGCAGTGCCTCACATGTCTGCTGGTGT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTCCCTGTCCGGGGACTaGCGCTTTGCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCSLSGD*RFALHL
Trigger: GAGATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGAGGTCGTATGCCAGGTaGCCCTGCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLRSYAR*PCSSPR
Trigger: CCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSDVVGK*RAEDGC
Trigger: ACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCACAAAGGAACGGTTTaGAGGGGACGTGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCHKGTV*RGRVGR
Trigger: CCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGTVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCAGATACCAGGACTGTaGCTGATAAATGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGQIPGL*LINARR
Trigger: CCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTACACGAGCAGAACATaGAGCTATGTGTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLYTSRT*SYVCAL
Trigger: CAGCGCACACACATAGCTGCATGTTCTGCTCGTGTA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGACAAGACAACAGCATaGTCAGCCACCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESADKTTA*SATGPQ
Trigger: CTGTGGTCCGGTGGCTGAGCATGCTGTTGTCTTGTC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGGGCTCTCTGGCCAATaGATATTACTTAAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFGLSGQ*ILLKGN
Trigger: ATTGCCCTTAAGTAATATGCATTGGCCAGAGAGCCC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTAAACCATCCACAACATaGTGCCTGGTATGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLKPSTT*CLVWAF
Trigger: AAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGAAGGTGGAATTGTCTaGTGCCTGGGGACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSEGGIV*CLGTCR
Trigger: CCTGCAGGTCCCCAGGCAGCAGACAATTCCACCTTC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGTGTGTTATCCAGTGTaGGGTAAGCAGAAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLVCYPV*GKQKAR
Trigger: TCTAGCTTTCTGCTTACCGCACACTGGATAACACAC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGACGGCCACGCCAATGTaGTGCGGCTGCACGCACAGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLTATPM*CGCTHR
Trigger: CCTGTGCGTGCAGCCGCACCACATTGGCGTGGCCGT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTACTCGTGGGCGAGCTaGGCGAAGTGTAGTAATCGC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESYSWAS*AKCSNR
Trigger: GCGATTACTACACTTCGCCCAGCTCGCCCACGAGTA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATACTCGTGGGCGAGCTaGGCGAAGTGTAGTAATCGC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAYSWAS*AKCSNR
Trigger: GCGATTACTACACTTCGCCCAGCTCGCCCACGAGTA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATTGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINCGCYS*ASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCA...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGCVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGCVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGCGATGAGGGTTGACTaGAGGGGCTGGTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGAMRVD*RGWWRG
Trigger: GCCTCTCCACCAGCCCCTCCAGTCAACCCTCATCGC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAAAACGCTTAGCAGATaGGAGGCCCCCTACACGGCT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAKTLSR*EAPYTA
Trigger: AGCCGTGTAGGGGGCCTCCCATCTGCTAAGCGTTTT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAAAACGCTTAGCAGATaGGAGGCCCCCTACACGGCT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESKTLSR*EAPYTA
Trigger: AGCCGTGTAGGGGGCCTCCCATCTGCTAAGCGTTTT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTGGCTGCGGGTGGAGTaGCCACCCCATGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLWLRVE*PPHGWR
Trigger: CCTCCAACCATGGGGTGGCCACTCCACCCGCAGCCA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGCAATAGTGAATGAATaGGACCATCTGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLAIVNE*DHLRGS
Trigger: GGACCCACGCAGATGGTCCCATTCATTCACTATTGC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCCACAACATGCTGCCTaGTATGGGCTTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGPQHAA*YGLLPA
Trigger: AGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCCAGGGTGGGGCCCTaGGGTCAGAACCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPRVGP*GQNLGS
Trigger: GGAACCCAGGTTCTGACCCCAGGGCCCCACCCTGGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCTGGGGCAGGGAAGGTaGAATTGTCTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCLGQGR*NCLLPG
Trigger: CCCAGGCAGCAGACAATTCCACCTTCCCTGCCCCAG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTGTCTCTCAAGGTCCTaGGGCAGGGAAGGTGGAATT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGCLSRS*GREGGI
Trigger: AATTCCACCTTCCCTGCCCCAGGACCTTGAGAGACA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTGGACAGTTGCTCCTaGCTCCAGAACCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLDSCS*LQNLSC
Trigger: GCAAGACAGGTTCTGGAGCCAGGAGCAACTGTCCAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTAGTATAGCCCTACACTaGAGGTCAAAGTACCATTGG +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFSIALH*RSKYHW
Trigger: CCAATGGTACTTTGACCTCCAGTGTAGGGCTATACT...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGATGCGGAGGAAGCTaGATTGAGAGATGTATGTCC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGCGGS*IERCMS
Trigger: GGACATACATCTCTCAATCCAGCTTCCTCCGCATCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGATGCGGAGGAAGCTaGATTGAGAGATGTATGTCC +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGCGGS*IERCMS
Trigger: GGACATACATCTCTCAATCCAGCTTCCTCCGCATCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAGAAATGGGGCAAGATaGGAGGATGCGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRNGAR*EDAEEA
Trigger: AGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTGACGTGGCAGAAATaGGGCAAGATGGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLTWQK*GKMGGC
Trigger: GCATCCTCCCATCTTGCCCCATTTCTGCCACGTCAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCTGCTGGTACTGCTTTaGGTCCGCCTCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLLVLL*VRLLTL
Trigger: CAAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCTGTTTTGGTATCACTaGCAACAAGTCCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFLFWYH*QQVLLV
Trigger: TACCAGCAGGACTTGTTGCCAGTGATACCAAAACAG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGCCCATATTCCTATTaGATCCCCTTCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGPYSY*IPFLLP
Trigger: AGGAAGGAGGAAGGGGATCCAATAGGAATATGGGCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCAAGCAGCTTTTCTCTaGGGAGTCGGAGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSQAAFL*GVGGGC
Trigger: GCACCCTCCTCCGACTCCCCAGAGAAAAGCTGCTTG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR TCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINRGPAP*RPRQCG
Trigger: ACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCT...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCGGGCTGTTGAATGGTaGCTTGTCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRAVEW*LVHLCL
Trigger: AAGACAGAGATGGACAAGTCACCATTCAACAGCCCG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCCGGGCTGTTGAATGGTaGCTTGTCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTRAVEW*LVHLCL
Trigger: AAGACAGAGATGGACAAGTCACCATTCAACAGCCCG...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAAGTGGCTGGGCATTTTaGGCTGACCACTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQSGWAF*ADHFHL
Trigger: TAAATGGAAGTGGTCAGCTCAAAATGCCCAGCCACT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGAGGTGCCAGCATCTaGGCAGAAAGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGGASI*AERQWL
Trigger: CAGCCACTGCCTTTCTGCTCAGATGCTGGCACCTCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAGGACGCTTGCGAAGTaGCGCCCAGCTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRTLAK*RPALPL
Trigger: GAGGGGCAGAGCTGGGCGTCACTTCGCAAGCGTCCT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCACGGGATGAGTGTATaGTGGTGGCTGTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSHGMSV*WWLWRP
Trigger: TGGTCTCCACAGCCACCATCATACACTCATCCCGTG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGCCTGGGGAGGCTGCTaGGGTGACTTTTTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSAWGGC*GDFLEE
Trigger: TTCTTCCAAAAAGTCACCTCAGCAGCCTCCCCAGGC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTCCGGATTGGGTTCATaGGCATTTTTGTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVSGLGS*AFLWVC
Trigger: ACACACCCACAAAAATGCTCATGAACCCAATCCGGA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATCCGGATTGGGTTCATaGGCATTTTTGTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQSGLGS*AFLWVC
Trigger: ACACACCCACAAAAATGCTCATGAACCCAATCCGGA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCCGCGAAAACCAAAATaGCTGCGTAATATACAAGGT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLPRKPK*LRNIQG
Trigger: ACCTTGTATATTACGCAGTCATTTTGGTTTTCGCGG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGCCACGCCAATGTGGTaGGGCTGCACGCACAGGACC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCATPMW*GCTHRT
Trigger: GGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAGGTCGTATGCCAGGTaGCCCTGCAGCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRSYAR*PCSSPR
Trigger: CCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCATCGAGCCCGATTTGTaGCGCTTGCTCCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCIEPDL*RLLPLE
Trigger: CTCCAGTGGGAGCAAGCGGCACAAATCGGGCTCGAT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGAC +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGREEDL*YPRYQD
Trigger: GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTTCCTCCTGAGTGTGTaGGTCTATGTGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFFLLSV*VYVFCL
Trigger: AAGACAAAACACATAGACGCACACACTCAGGAGGAA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESATVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGACTGTGCCTGATAAATaGCCGCAGGATCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQTVPDK*PQDPLV
Trigger: GACCAAGGGATCCTGCGGGCATTTATCAGGCACAGT...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTTAACGGTCCAGGTTaGTGGCTGGCTGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCFNGPG*WLAGSQ
Trigger: CTGCGACCCAGCCAGCCAGCAACCTGGACCGTTAAA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTACAGGCTCCAGGCTGTaGTCACCTGGTCTCCGGACA +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGTGSRL*SPGLRT
Trigger: TGTCCGGAGACCAGGTGAGCACAGCCTGGAGCCTGT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCAGGGATAGTCTGCCATaGATGTGTGTCAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCRDSLP*MCVSAA
Trigger: GGCGGCGCTGACACACATGCATGGCAGACTATCCCT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGAAGGTGGGAGAGAATaGCACCTGGGGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCEGGRE*HLGWSL
Trigger: CAGAGACCACCCCAGGTGGCATTCTCTCCCACCTTC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGACAAGACAACAGCATaGTCAGCCACCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSDKTTA*SATGPQ
Trigger: CTGTGGTCCGGTGGCTGAGCATGCTGTTGTCTTGTC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAATCAGCTACATGAATaGTGTGCACAGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESANQLHE*CAQPAR
Trigger: CCGGGCTGGCTGTGCACAGCATTCATGTAGCTGATT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTTGGCAAGACAGATTTaGTCAGGAGTGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGLARQI*SGVGQK
Trigger: TTTCTGCCCCACTCCTGAGCAAATCTGTCTTGCCAA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCTGGTATGGGCTTTTaGCTGCTGTACTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPGMGF*LLYSAK
Trigger: CTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGATGGGCACGGAATCCTaGTTCCTGGTGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLMGTES*FLVFLS
Trigger: AGACAAAAACACCAGGAAGCAGGATTCCGTGCCCAT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTGTCTGTGCCTGGAATaGTGCTGTCTCTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESCLCLE*CCLSRS
Trigger: GGACCTTGAGAGACAGCAGCATTCCAGGCACAGACA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCTCCAGAACCTGTCTTaGAAGGGACAGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLQNLS*KGQWGA
Trigger: TGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGAGGGTGGGGGACCTaGTGGAACCTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGGWGT*WNLLRI
Trigger: AATCCGGAGAAGGTTCCAGCAGGTCCCCCACCCTCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCCCCAGGGAGAAGTTaGGTCCTGTTCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCPPGRS*VLFQSP
Trigger: TGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGAGGCCAGTGCTGGCTaGGTTCAGGTCGTATGCCAG +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINEASAG*VQVVCQ
Trigger: CTGGCATACGACCTGAACCCAGCCAGCACTGGCCTC...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATATACTCGTGGGCGAGCTaGGCGAAGTGTAGTAATCGC +
Preference number: 4 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIYSWAS*AKCSNR
Trigger: GCGATTACTACACTTCGCCCAGCTCGCCCACGAGTA...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGAACTCATCCATaGCGCTGCTGCGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLGGTHP*RCCEEA
Trigger: CGCCTCCTCGCAGCAGCGCCATGGATGAGTTCCACC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000589123.5
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGCGATGAGGGTTGACTaGAGGGGCTGGTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLAMRVD*RGWWRG
Trigger: GCCTCTCCACCAGCCCCTCCAGTCAACCCTCATCGC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTAGGACAGCCAGGGGCTaGGTAGACCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGRTARG*VDLGAI
Trigger: AATTGCCCCCAGGTCTACCCAGCCCCTGGCTGTCCT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTGTCGTGGCCAGCTGTaGTGGTCTGGGCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLCRGQL*WSGLSL
Trigger: GAGGGAGAGCCCAGACCACCACAGCTGGCCACGACA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGACATGCTGCCTGGTATaGGCTTTTGCCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGTCCLV*AFACCT
Trigger: AGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCACAACATGCTGCCTaGTATGGGCTTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPQHAA*YGLLPA
Trigger: AGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTTCTTTCCCACAGCATaGGCAGACCCCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGFFPTA*ADPRMR
Trigger: TCTCATTCTGGGGTCTGCCCATGCTGTGGGAAAGAA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCCTTTGGCATTCCTTTaGGATCTGATTGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGPLAFL*DLIVQP
Trigger: GGGCTGGACAATCAGATCCCAAAGGAATGCCAAAGG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCTGGGGCAGGGAAGGTaGAATTGTCTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGLGQGR*NCLLPG
Trigger: CCCAGGCAGCAGACAATTCCACCTTCCCTGCCCCAG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAGGAAGTGTCTGACGTaGCAGAAATGGGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRKCLT*QKWGKM
Trigger: CATCTTGCCCCATTTCTGCCACGTCAGACACTTCCT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTGTACCATTGAGCAATaGATGGGCAGCGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGCTIEQ*MGSGVI
Trigger: AATGACACCGCTGCCCATCCATTGCTCAATGGTACA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGGCAACAAGTCCTGCTaGTACTGCTTTGGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCGNKSC*YCFGSA
Trigger: GGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGAACCTTCTCCGGATTaGGTTCATGAGCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: WPSSPAALASRELETLRLEPSPD*VHEHFC
Trigger: ACAAAAATGCTCATGAACCCAATCCGGAGAAGGTTC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCGGTCGTGTCCAGCGTaGTGGGCTTGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRSCPA*WACCPP
Trigger: AGGAGGACAGCAAGCCCATCACGCTGGACACGACCG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACCGGGCTGTTGAATGGTaGCTTGTCCATCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDRAVEW*LVHLCL
Trigger: AAGACAGAGATGGACAAGTCACCATTCAACAGCCCG...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCAAGGGATTCAGAAATaGCCCCTCTGGGTACCCAAG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSQGIQK*PLWVPK
Trigger: CTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCGGCACCCCCTTTTGTaGACCCAAACTGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCRHPLL*TQTAEM
Trigger: CATCTCTGCAGTTTGGGTTCACAAAAGGGGGTGCCG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTCCCTGTCCGGGGACTaGCGCTTTGCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLSLSGD*RFALHL
Trigger: GAGATGCAGAGCAAAGCGGCAGTCCCCGGACAGGGA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCYARCP*SSPREK
Trigger: CTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATATCGAGCCCGATTTGTaGCGCTTGCTCCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINIEPDL*RLLPLE
Trigger: CTCCAGTGGGAGCAAGCGGCACAAATCGGGCTCGAT...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTATCGAGCCCGATTTGTaGCGCTTGCTCCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGIEPDL*RLLPLE
Trigger: CTCCAGTGGGAGCAAGCGGCACAAATCGGGCTCGAT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCACAAAGGAACGGTTTaGAGGGGACGTGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLHKGTV*RGRVGR
Trigger: CCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAATTTCTTACAGTGTGTaGAATGTGGGTCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQISYSV*NVGPSL
Trigger: AAGGGAGGGACCCACATTGCACACACTGTAAGAAAT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCAGCCTGTGACTCGGTaGCACCTGGCTGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCQPVTR*HLAVPV
Trigger: CACAGGGACAGCCAGGTGGCACCGAGTCACAGGCTG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGAGGTGGTGAGGGCTaGAGGAATGGCCTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGGGEG*RNGLRL
Trigger: CAACCTTAGGCCATTCCTGCAGCCCTCACCACCTCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTATGAATGGGACCATCTaGGTGGGTCCCTACACGAGA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSMNGTI*VGPYTR
Trigger: TCTCGTGTAGGGACCCACGCAGATGGTCCCATTCAT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGGCTCTCTGGCCAATaGATATTACTTAAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGLSGQ*ILLKGN
Trigger: ATTGCCCTTAAGTAATATGCATTGGCCAGAGAGCCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAATCAGCTACATGAATaGTGTGCACAGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSNQLHE*CAQPAR
Trigger: CCGGGCTGGCTGTGCACAGCATTCATGTAGCTGATT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCCATCCACAACATGCTaGCTGGTATGGGCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSPSTTC*LVWAFA
Trigger: GGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAAACCATCCACAACATaGTGCCTGGTATGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGKPSTT*CLVWAF
Trigger: AAAAGCCCATACCAGGCAGCATGTTGTGGATGGTTT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTTGTCTTACTCTGTCTaGAGCAAGGCGCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLSYSV*SKAPGN
Trigger: ATTCCCAGGCGCCTTGCTGCAGACAGAGTAAGACAA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGTCTGTGCCTGGAATaGTGCTGTCTCTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSCLCLE*CCLSRS
Trigger: GGACCTTGAGAGACAGCAGCATTCCAGGCACAGACA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAGCCAAGTCTGTCTGTaGCTGGAATGCTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSSQVCL*LECCCL
Trigger: GAGACAGCAGCATTCCAGGCACAGACAGACTTGGCT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCTCCAGAACCTGTCTTaGAAGGGACAGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCLQNLS*KGQWGA
Trigger: TGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTACTGGCAACAAGTCCTaGTGGTACTGCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSTGNKS*WYCFGS
Trigger: GGACCCAAAGCAGTACCAGCAGGACTTGTTGCCAGT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGTGTGTTATCCAGTGTaGGGTAAGCAGAAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLVCYPV*GKQKAR
Trigger: TCTAGCTTTCTGCTTACCGCACACTGGATAACACAC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGGTGGAACTCATCCTaGGTGAGGCAGAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGWNSS*VRQSGD
Trigger: GTCCCCGCTCTGCCTCACCCAGGATGAGTTCCACCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443272.3
CDS-3UTR CCA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAAGTGACAAAGCTCTCCTaGAAGTCGGTCGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKVTKLS*KSVVSS
Trigger: GCTGGACACGACCGACTTCCAGGAGAGCTTTGTCAC...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGGTGTCCGGGACACTTaGATGAGCTCAGTGACGCTG +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINGVRDT*MSSVTL
Trigger: CAGCGTCACTGAGCTCATCCAAGTGTCCCGGACACC...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATCCCCCAGGGAGAAGTTaGGTCCTGTTCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINPPGRS*VLFQSP
Trigger: TGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGG...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSCVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGCGATGAGGGTTGACTaGAGGGGCTGGTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCAMRVD*RGWWRG
Trigger: GCCTCTCCACCAGCCCCTCCAGTCAACCCTCATCGC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGAGGACAGCCAGGGGCTaGGTAGACCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLRTARG*VDLGAI
Trigger: AATTGCCCCCAGGTCTACCCAGCCCCTGGCTGTCCT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGAGAGAATGCCACCTaGGGTGGTCTCTGGATAGGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGENAT*GGLWIG
Trigger: CCCTATCCAGAGACCACCCCAGGTGGCATTCTCTCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGACATGCTGCCTGGTATaGGCTTTTGCCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESTCCLV*AFACCT
Trigger: AGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTTCTTTCCCACAGCATaGGCAGACCCCAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESFFPTA*ADPRMR
Trigger: TCTCATTCTGGGGTCTGCCCATGCTGTGGGAAAGAA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCCTGGGGTCAGAACCTaGGTTCCAGACCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLPGVRT*VPDLGM
Trigger: CATGCCCAGGTCTGGAACCCAGGTTCTGACCCCAGG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGAATTGTCTGCTGCCTaGGGACCTGCAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCELSAA*GPAGGP
Trigger: GGGTCCCCCTGCAGGTCCCCAGGCAGCAGACAATTC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCTGGGGCAGGGAAGGTaGAATTGTCTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLLGQGR*NCLLPG
Trigger: CCCAGGCAGCAGACAATTCCACCTTCCCTGCCCCAG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCAGTATAGCCCTACACTaGAGGTCAAAGTACCATTGG +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGSIALH*RSKYHW
Trigger: CCAATGGTACTTTGACCTCCAGTGTAGGGCTATACT...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGCAACAAGTCCTGCTaGTACTGCTTTGGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGNKSC*YCFGSA
Trigger: GGCGGACCCAAAGCAGTACCAGCAGGACTTGTTGCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCTGTTTTGGTATCACTaGCAACAAGTCCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGLFWYH*QQVLLV
Trigger: TACCAGCAGGACTTGTTGCCAGTGATACCAAAACAG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGGTGGGGGACCTGCTaGAACCTTCTCCGGATTGGG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGWGTC*NLLRIG
Trigger: CCCAATCCGGAGAAGGTTCCAGCAGGTCCCCCACCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGTCACTTTCTGTAAATaGTACTTAGGTAGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLVTFCK*YLGRRV
Trigger: GACGCGCCTACCTAAGTACCATTTACAGAAAGTGAC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCTGGGCATTTTGAGCTaGCCACTTCCATTTAACGGT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESLGILS*PLPFNG
Trigger: ACCGTTAAATGGAAGTGGTCAGCTCAAAATGCCCAG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGTGGCTGGGCATTTTaGGCTGACCACTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESASGWAF*ADHFHL
Trigger: TAAATGGAAGTGGTCAGCTCAAAATGCCCAGCCACT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGTATGCCAGCCTGCATaGAAAGTGGGGAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCVCQPA*KVGSGE
Trigger: CTCCCCGCTCCCCACTTTTCATGCAGGCTGGCATAC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCGGCACCCCCTTTTGTaGACCCAAACTGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGRHPLL*TQTAEM
Trigger: CATCTCTGCAGTTTGGGTTCACAAAAGGGGGTGCCG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCATTCCTTTGGGATCTaGTTGTCCAGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGHSFGI*LSSPGW
Trigger: CCACCCTGGGCTGGACAATCAGATCCCAAAGGAATG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCACACTCTGTACCATTaGGCAATGGATGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGHTLYH*AMDGQR
Trigger: CCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCACACCAGCAGACATGTaGGGCACTGCTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCTPADM*GTAWEK
Trigger: CTTTTCCCAAGCAGTGCCTCACATGTCTGCTGGTGT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAREEDL*YPRYQD
Trigger: GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGAC +
Preference number: 4 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDREEDL*YPRYQD
Trigger: GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCT...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCCAGATACCAGGACTGTaGCTGATAAATGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRRPLLSQIPGLCLINARQIPGL*LINARR
Trigger: CCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTG...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCCTTCCTCGGAAAGTaGATTTCTTACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPFLGK*ISYSVC
Trigger: GCACACACTGTAAGAAATGCACTTTCCGAGGAAGGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTACACGAGCAGAACATaGAGCTATGTGTGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSYTSRT*SYVCAL
Trigger: CAGCGCACACACATAGCTGCATGTTCTGCTCGTGTA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGAGGTGGTGAGGGCTaGAGGAATGGCCTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLGGGEG*RNGLRL
Trigger: CAACCTTAGGCCATTCCTGCAGCCCTCACCACCTCC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTAAGTCCTGCTGGTACTaGTTTGGGTCCGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGKSCWY*FGSASS
Trigger: TGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGAGACATGTGAGGCACTaGTTGGGAAAAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLRHVRH*LGKVCF
Trigger: AAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCT...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAAGACATGTGAGGCACTaGTTGGGAAAAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQRHVRH*LGKVCF
Trigger: AAAACAGACTTTTCCCAAGCAGTGCCTCACATGTCT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGTGTGTTATCCAGTGTaGGGTAAGCAGAAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGVCYPV*GKQKAR
Trigger: TCTAGCTTTCTGCTTACCGCACACTGGATAACACAC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGTGACAAAGCTCTCCTaGAAGTCGGTCGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGVTKLS*KSVVSS
Trigger: GCTGGACACGACCGACTTCCAGGAGAGCTTTGTCAC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCCCCCAGGGAGAAGTTaGGTCCTGTTCCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLPPGRS*VLFQSP
Trigger: TGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGGGTTGAGATGAGGTaGGTAGCGGATGGCCGTGTG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGVEMR*VADGRV
Trigger: CACACGGCCATCCGCTACCCACCTCATCTCAACCCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGATTCCTGGGACGATaGAGAAGGGGCGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLGFLGR*RRGEGR
Trigger: TCTTCCCTCGCCCCTTCTCCATCGTCCCAGGAATCC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTCTTTTTGGCCGGGCTaGGAGTCGGCAGGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCSFWPG*ESAGVF
Trigger: GAACACCCCTGCCGACTCCCAGCCCGGCCAAAAAGA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTGGCGTCCCGAGAGTTaGAAACGTTGCGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCWRPES*KRCVFT
Trigger: GGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCAGTCCTGCGGCCTTaGCGTCCCGAGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPVLRP*RPESWK
Trigger: TTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCTCCTGAGGCTAGTTTaGGAGGAGAGTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLLRLV*EESLVF
Trigger: GAAAACCAGACTCTCCTCCCAAACTAGCCTCAGGAG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTTTAAGGGCAATGTCGTaGCCAGCTGTGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGLRAMS*PAVVVW
Trigger: CCAGACCACCACAGCTGGCCACGACATTGCCCTTAA...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGTGCCCCCACGGAATaGGGACAATTTGCATATATT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAGAPTE*GQFAYI
Trigger: AATATATGCAAATTGTCCCCATTCCGTGGGGGCACC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATGTACCATTGAGCAATaGATGGGCAGCGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESACTIEQ*MGSGVI
Trigger: AATGACACCGCTGCCCATCCATTGCTCAATGGTACA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGAGGTCAAGGGTGGTaGACTGACCCCACACTCTGT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLGGQGW*TDPTLC
Trigger: ACAGAGTGTGGGGTCAGTCCACCACCCTTGACCTCC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGAACCTTCTCCGGATTaGGTTCATGAGCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQEPSPD*VHEHFC
Trigger: ACAAAAATGCTCATGAACCCAATCCGGAGAAGGTTC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAGTGGCTGGGCATTTTaGGCTGACCACTTCCATTTA +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSSGWAF*ADHFHL
Trigger: TAAATGGAAGTGGTCAGCTCAAAATGCCCAGCCACT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCATTCCTTTGGGATCTaGTTGTCCAGCCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLHSFGI*LSSPGW
Trigger: CCACCCTGGGCTGGACAATCAGATCCCAAAGGAATG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCATCGAGCCCGATTTGTaGCGCTTGCTCCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCIEPDL*RLLPLE
Trigger: CTCCAGTGGGAGCAAGCGGCACAAATCGGGCTCGAT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGAC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSREEDL*YPRYQD
Trigger: GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTTCCTCCTGAGTGTGTaGGTCTATGTGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGFLLSV*VYVFCL
Trigger: AAGACAAAACACATAGACGCACACACTCAGGAGGAA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCAGATACCAGGACTGTaGCTGATAAATGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGQIPGL*LINARR
Trigger: CCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCCCTTCCTCGGAAAGTaGATTTCTTACAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSPFLGK*ISYSVC
Trigger: GCACACACTGTAAGAAATGCACTTTCCGAGGAAGGG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTATGAATGGGACCATCTaGGTGGGTCCCTACACGAGA +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGMNGTI*VGPYTR
Trigger: TCTCGTGTAGGGACCCACGCAGATGGTCCCATTCAT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCCTGGTATGGGCTTTTaGCTGCTGTACTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGPGMGF*LLYSAK
Trigger: CTTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTCTTACTCTGTCTaGAGCAAGGCGCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCLSYSV*SKAPGN
Trigger: ATTCCCAGGCGCCTTGCTGCAGACAGAGTAAGACAA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTTTGTGAACCCAAACTaGAGAGATGGGCACGGAATC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSFVNPN*RDGHGI
Trigger: GATTCCGTGCCCATCTCTGCAGTTTGGGTTCACAAA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTTGTCTGTGCCTGGAATaGTGCTGTCTCTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGCLCLE*CCLSRS
Trigger: GGACCTTGAGAGACAGCAGCATTCCAGGCACAGACA...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCTCCAGAACCTGTCTTaGAAGGGACAGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLLQNLS*KGQWGA
Trigger: TGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTTGGCGTCCCGAGAGTTaGAAACGTTGCGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGWRPES*KRCVFT
Trigger: GGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCA...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGACAGTGTGTGCAATGTaGGTCCCTCCCTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLTVCAM*VPPFGG
Trigger: ACCCCCAAAGGGAGGGACCCACATTGCACACACTGT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGATGGGGGAGGGTCCTaGGTCTTTCTCTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLDGGGS*VFLFRS
Trigger: GCTCCTAAAGAGAAAGACCCAGGACCCTCCCCCATC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTTCATATTCACAGCTaGAAGACAGAGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESALHIHS*KTETGD
Trigger: ATCCCCTGTCTCTGTCTTCCAGCTGTGAATATGAAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGATGGGACCATCTGCGTaGGTCCCTACACGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLMGPSA*VPTRDA
Trigger: AGCATCTCGTGTAGGGACCCACGCAGATGGTCCCAT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAAGTATAGCCCTACACTaGAGGTCAAAGTACCATTGG +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESASIALH*RSKYHW
Trigger: CCAATGGTACTTTGACCTCCAGTGTAGGGCTATACT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGAGGTCAAGGGTGGTaGACTGACCCCACACTCTGT +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGGQGW*TDPTLC
Trigger: ACAGAGTGTGGGGTCAGTCCACCACCCTTGACCTCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
3UTR CAA 72 bp GGTCATTGTCAGGTGCCCCCACGGAATGGGGACAATTaGCATATATTTGGGAGGCCTCCCTATTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GHCQVPPRNGDN*HIFGRPPYSFP
Trigger: TGGGAAAGAATAGGGAGGCCTCCCAAATATATGCAAATTGTCCCCATTCCGTGGGGGCACCTGACAATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: PPECVRLCVLSFWPGWESFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCTGGGCATTTTGAGCTaGCCACTTCCATTTAACGGT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCLGILS*PLPFNG
Trigger: ACCGTTAAATGGAAGTGGTCAGCTCAAAATGCCCAG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGCTATGTGTGTGCGCTaGTATTGTTTAAAGGTAATA +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLAMCVR*YCLKVI
Trigger: TATTACCTTTAAACAATATCAGCGCACACACATAGC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGGGGCAATAGTGAATaGATGGGACCATCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGGNSE*MGPSAW
Trigger: CCACGCAGATGGTCCCATTCATTCACTATTGCCCCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTTCCAGACCTGGGCATaGAGGACTCCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCFQTWA*RTPDPP
Trigger: AGGAGGATCTGGAGTCCTTCATGCCCAGGTCTGGAA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGGCTCTCTGGCCAATaGATATTACTTAAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSGLSGQ*ILLKGN
Trigger: ATTGCCCTTAAGTAATATGCATTGGCCAGAGAGCCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTTGTGAACCCAAACTaGAGAGATGGGCACGGAATC +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCFVNPN*RDGHGI
Trigger: GATTCCGTGCCCATCTCTGCAGTTTGGGTTCACAAA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAAGTCCTGCTGGTACTaGTTTGGGTCCGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCKSCWY*FGSASS
Trigger: TGAGGAGGCGGACCCAAAGCAGTACCAGCAGGACTT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCTCCTGAGGCTAGTTTaGGAGGAGAGTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGLLRLV*EESLVF
Trigger: GAAAACCAGACTCTCCTCCCAAACTAGCCTCAGGAG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCTTCATATTCACAGCTaGAAGACAGAGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLHIHS*KTETGD
Trigger: ATCCCCTGTCTCTGTCTTCCAGCTGTGAATATGAAG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTTGCTCCTAGTTCCTTaGCAAGACAGATTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSLLLVP*QDRFAQ
Trigger: CTGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTACATGCTGCCTGGTATaGGCTTTTGCCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGTCCLV*AFACCT
Trigger: AGTACAGCAGGCAAAAGCCCATACCAGGCAGCATGT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCCACAACATGCTGCCTaGTATGGGCTTTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLPQHAA*YGLLPA
Trigger: AGCAGGCAAAAGCCCATACCAGGCAGCATGTTGTGG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCAATTTGCATATATTTaGGAGGCCTCCCTATTCTTT +
Preference number: 4 (lower is better)
Translates to: LGASGFAKLLRLVWEESLQFAYI*EASLFF
Trigger: AAAGAATAGGGAGGCCTCCCAAATATATGCAAATTG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGAGAAATGGGGCAAGATaGGAGGATGCGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLRNGAR*EDAEEA
Trigger: AGCTTCCTCCGCATCCTCCCATCTTGCCCCATTTCT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAAAAGTCTGTTTTaGTATCACTGGCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: PECVRLCVLSFWPGWESAGKSLF*YHWQQV
Trigger: GACTTGTTGCCAGTGATACCAAAACAGACTTTTCCC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGTCACTTTCTGTAAATaGTACTTAGGTAGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSVTFCK*YLGRRV
Trigger: GACGCGCCTACCTAAGTACCATTTACAGAAAGTGAC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTTTTTCTTTTCCTCCTaGGTGTGTGCGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: AALASRELETLRLYLLSSFFFSS*VCASMC
Trigger: ACACATAGACGCACACACTCAGGAGGAAAAGAAAAA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGCTATGTGTGTGCGCTaGTATTGTTTAAAGGTAATA +
Preference number: 4 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGAMCVR*YCLKVI
Trigger: TATTACCTTTAAACAATATCAGCGCACACACATAGC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGGAGGCTGCTGAGGTaGCTTTTTGGAAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLGRLLR*LFGRKH
Trigger: GTGTTTTCTTCCAAAAAGTCACCTCAGCAGCCTCCC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTTCCGGATTGGGTTCATaGGCATTTTTGTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGSGLGS*AFLWVC
Trigger: ACACACCCACAAAAATGCTCATGAACCCAATCCGGA...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGAC +
Preference number: 4 (lower is better)
Translates to: EGRRPLLSQIPGLCLINAREEDL*YPRYQD
Trigger: GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCT...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR GCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCCATCCACAACATGCTaGCTGGTATGGGCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCPSTTC*LVWAFA
Trigger: GGCAAAAGCCCATACCAGGCAGCATGTTGTGGATGG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTATGGGCACGGAATCCTaGTTCCTGGTGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGMGTES*FLVFLS
Trigger: AGACAAAAACACCAGGAAGCAGGATTCCGTGCCCAT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGTGTTTTGTCTTTTTaGCCGGGCTGGGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCCVLSF*PGWESA
Trigger: TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGAATGCCACCTGGGGTaGTCTCTGGATAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCECHLG*SLDRGK
Trigger: TTTTCCCCTATCCAGAGACCACCCCAGGTGGCATTC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGCTGAGGTGACTTTTTaGAAGAAAACACGGGATGAG +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCAEVTF*KKTRDE
Trigger: CTCATCCCGTGTTTTCTTCCAAAAAGTCACCTCAGC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGAAGAAAACACGGGATaGGTGTATGATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLEENTG*VYDGGC
Trigger: ACAGCCACCATCATACACTCATCCCGTGTTTTCTTC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGTTCTTTCTCTGTGTaGGAATGCTCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCCSFSV*ECSGLG
Trigger: ACCCAGCCCTGAGCATTCTCACACAGAGAAAGAACA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTTGGCAAGACAGATTTaGTCAGGAGTGGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLLARQI*SGVGQK
Trigger: TTTCTGCCCCACTCCTGAGCAAATCTGTCTTGCCAA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCTCCTGAGGCTAGTTTaGGAGGAGAGTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCLLRLV*EESLVF
Trigger: GAAAACCAGACTCTCCTCCCAAACTAGCCTCAGGAG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTTTGCTCCTAGTTCCTTaGCAAGACAGATTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGLLLVP*QDRFAQ
Trigger: CTGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAA...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGAAGTCTGTCTGTGCCTaGAATGCTGCTGTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLKSVCA*NAAVSQ
Trigger: TTGAGAGACAGCAGCATTCCAGGCACAGACAGACTT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR TCA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCCGCGAAAACCAAAATaGCTGCGTAATATACAAGGT +
Preference number: 4 (lower is better)
Translates to: ASRELETLRLYLLSSCLGPRKPK*LRNIQG
Trigger: ACCTTGTATATTACGCAGTCATTTTGGTTTTCGCGG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR GCA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATTTCCTCCTGAGTGTGTaGGTCTATGTGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINFLLSV*VYVFCL
Trigger: AAGACAAAACACATAGACGCACACACTCAGGAGGAA...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CCA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCAATTTGCATATATTTaGGAGGCCTCCCTATTCTTT +
Preference number: 4 (lower is better)
Translates to: ALASRELETLRLYLLSSCQFAYI*EASLFF
Trigger: AAAGAATAGGGAGGCCTCCCAAATATATGCAAATTG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CCA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCAATTTGCATATATTTaGGAGGCCTCCCTATTCTTT +
Preference number: 4 (lower is better)
Translates to: LASRELETLRLYLLSSCLQFAYI*EASLFF
Trigger: AAAGAATAGGGAGGCCTCCCAAATATATGCAAATTG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS CCA 90 bp GGCGAGGGCGGCCCCGAATCGCCTTATGGGGACCGGAGTGCGGGCTaGGCCGGCCGCCTGGGAGGCAGGTCCGGGCACCCGGCTTCCATG +
Preference number: 5 (lower is better)
Translates to: GEGGPESPYGDRSAG*AGRLGGRSGHPASM
Trigger: CATGGAAGCCGGGTGCCCGGACCTGCCTCCCAGGCGGCCGGCCCAGCCCGCACTCCGGTCCCCATAAGGCGATTCGGGGCCGCCCTCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGTGGCCACCCCATGGTaGGAGGACAGCCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAVATPW*EDSLQW
Trigger: CCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCAC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCCGATTTGTGCCGCTaGCTCCCACTGGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPDLCR*LPLEEV
Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAATCGGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGGCCACCCACTCCCTTaGCCTCCGGTTGCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHGHPLP*PPVAPS
Trigger: ACTAGGAGCAACCGGAGGCAAAGGGAGTGGGTGGCC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACTCTCCACCCGGGTCATaGTCAGGTGCCCCCACGGAA +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHSPPGS*SGAPTE
Trigger: TTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGA...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS TCA 90 bp TTGACGGCCACGCCAATGTGGTGCGGCTGCACGCACAGGACCGGGTaGCCGCACTGCGCAGCCTTGACCAGGCGCTCGCCGTCGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LTATPMWCGCTHRTG*PHCAALTRRSPSVL
Trigger: GAGCACCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGCCGTCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTCCAGCGTGATGGGCTaGCTGTCCTCCTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERASSVMG*LSSWSE
Trigger: CTCTGACCAGGAGGACAGCAAGCCCATCACGCTGGA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACGCTCCAGAACCTGTCTaGCAAGGGACAGTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHAPEPV*QGTVGC
Trigger: GCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGC...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCCTGCTGGTACTGCTTaGGGTCCGCCTCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAPAGTA*GPPPHL
Trigger: AAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGCCTGTGTCCCCTTTTaGGAGGGCTCTCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAACVPF*EGSLPA
Trigger: GGCTGGAAGAGAGCCCTCCAAAAAGGGGACACAGGC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS TCA 90 bp GCTGGGCCGGCCGCCTGGGAGGCAGGTCCGGGCACCCGGCTTCCATaGTGCCGTCACACAAGCAGCTTTTCTCTGGGGAGTCGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: AGPAAWEAGPGTRLP*CRHTSSFSLGSRRR
Trigger: CCTCCTCCGACTCCCCAGAGAAAAGCTGCTTGTGTGACGGCATCATGGAAGCCGGGTGCCCGGACCTGCCTCCCAGGCGGCCGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTCCCTTTGCCTCCGGTaGCTCCTAGTTCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERASLCLR*LLVPWQ
Trigger: TTGCCAAGGAACTAGGAGCAACCGGAGGCAAAGGGA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGTGGAGGGCTGGACAGTaGCTCCTGGCTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLWRAGQ*LLAPEP
Trigger: AGGTTCTGGAGCCAGGAGCAACTGTCCAGCCCTCCA...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS GCA 90 bp TCTGGCCCTCGGGCCGCCACTGTGAGATCCGTGTCCACTGTCAGCTaGCTGACATACCAGGGAGGGTTTCTGACGGCCCACGGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: SGPRAATVRSVSTVS*LTYQGGFLTAHGGH
Trigger: GTGCCCGCCGTGGGCCGTCAGAAACCCTCCCTGGTATGTCAGGCAGCTGACAGTGGACACGGATCTCACAGTGGCGGCCCGAGGGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589969.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCTTGGCAAGACAGATTaGCTCAGGAGTGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHLGKTD*LRSGAE
Trigger: TTCTGCCCCACTCCTGAGCAAATCTGTCTTGCCAAG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCCCCTTTGGCATTCCTTaGGGATCTGATTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAPFGIP*GSDCPA
Trigger: GGCTGGACAATCAGATCCCAAAGGAATGCCAAAGGG...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS CCA 90 bp CGGGCACCCGGCTTCCATGATGCCGTCACACAAGCAGCTTTTCTCTaGGGAGTCGGAGGAGGGTGCCGGGGACACTGGGAGCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: RAPGFHDAVTQAAFL*GVGGGCRGHWELES
Trigger: GCTCTCCAGCTCCCAGTGTCCCCGGCACCCTCCTCCGACTCCCCAGAGAAAAGCTGCTTGTGTGACGGCATCATGGAAGCCGGGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAATGTCCTCCGTCCAGTaGCGGCTGCTACTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRMSSVQ*RLLLVG
Trigger: GCCCACGAGTAGCAGCCGCAACTGGACGGAGGACAT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCG +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRPQRNG*QGTCRA
Trigger: CGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCCCAGCTTAGTGTTTTaGGAGCGGCTCAACGGAAAA +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHPSLVF*ERLNGK
Trigger: TTTTCCGTTGAGCCGCTCCAAAAACACTAAGCTGGG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGGCCACCCACTCCCTTaGCCTCCGGTTGCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRGHPLP*PPVAPS
Trigger: ACTAGGAGCAACCGGAGGCAAAGGGAGTGGGTGGCC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGGCGGAGGAAGCTGGATaGAGAGATGTATGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLAEEAG*RDVCPS
Trigger: GCTGGGACATACATCTCTCAATCCAGCTTCCTCCGC...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTGCCCAGGTGTCCCCTaGTCCCCCTCCTGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFCPGVP*SPSCPR
Trigger: GCGAGGACAGGAGGGGGACAAGGGGACACCTGGGCA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS TCA 90 bp CATCTCGCTCACGCACGAAGTAGGCCAGGTAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGTGCGGCTGCACGCACAGGACCGGGT +
Preference number: 5 (lower is better)
Translates to: HLAHARSRPGRGPAP*RPRQCGAAARTGPG
Trigger: ACCCGGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCTACCTGGCCTACTTCGTGCGTGAGCGAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS TCA 90 bp TGTCTCGCTCACGCACGAAGTAGGCCAGGTAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGTGCGGCTGCACGCACAGGACCGGGT +
Preference number: 5 (lower is better)
Translates to: CLAHARSRPGRGPAP*RPRQCGAAARTGPG
Trigger: ACCCGGTCCTGTGCGTGCAGCCGCACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCTACCTGGCCTACTTCGTGCGTGAGCGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586919.5
CDS GCA 90 bp CTGAGGCCAGTGCTGGCTGGGTTCAGGTCGTATGCCAGGTGCCCCTaGAGCTCCCCCAGGGAGAAGTTGGGTCCTGTTCCAGTCACCACG +
Preference number: 5 (lower is better)
Translates to: LRPVLAGFRSYARCP*SSPREKLGPVPVTT
Trigger: CGTGGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGGGCACCTGGCATACGACCTGAACCCAGCCAGCACTGGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS GCA 90 bp CCGGGGACGAGATGCCTCCTTCCATGTCCTCCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGGGCGAAGTGTAGTAATCGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: PGTRCLLPCPPSSCG*YSWASWAKCSNRRQ
Trigger: CTGGCGGCGATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCTCGTCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCGGGGACTGCCGCTTaGCTCTGCATCTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPGTAA*LCISLT
Trigger: CGTGAGCGAGATGCAGAGCAAAGCGGCAGTCCCCGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGAGGTCGCAGGAGTCCTaGACTAAGCACCATGCAAAG +
Preference number: 5 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLRSQES*TKHHAK
Trigger: CTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACCT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCTTGGCAAGACAGATTaGCTCAGGAGTGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLLGKTD*LRSGAE
Trigger: TTCTGCCCCACTCCTGAGCAAATCTGTCTTGCCAAG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCGTTGCTCCTAGTTCCTaGGCAAGACAGATTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAVAPSS*ARQICS
Trigger: TGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAAC...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCCCGCCCGCCCTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCATGTGAGGCACTGCTaGGGAAAAGTCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: LPRPPSRRAAHALIPKGHHVRHC*GKVCFG
Trigger: ACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATG...GTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAGGGCGGGCGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGCCCTGGAGCCCTTGCTaGTTCTTTCTCTGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLPWSPC*FFLCVR
Trigger: TCTCACACAGAGAAAGAACAAGCAAGGGCTCCAGGG...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCGCACTGCGCAGCCTaGACCAGGCGCTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPHCAA*TRRSPS
Trigger: CGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACCCGCACTGCGCAGCCTaGACCAGGCGCTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDPHCAA*TRRSPS
Trigger: CGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGG...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAAGCGAGACAAGATCTTaGAGCGGGTCCTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRSETRS*SGSWGL
Trigger: CAACCCCCAGGACCCGCTCAAAGATCTTGTCTCGCT...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCAGTCCTGCGGCCTaGGCGTCCCGAGAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: WPSSPAALASRELETLRLSSPAA*ASRELE
Trigger: TTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGCAGGGCAGGACGCTaGCGAAGTGACGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGRAGR*RSDAQL
Trigger: GAGCTGGGCGTCACTTCGCAAGCGTCCTGCCCTGCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGATGGCGAACCTCTCTaGGGGGTGATGGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFDGEPL*GVMGEG
Trigger: ACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTGCCCAGGTGTCCCCTaGTCCCCCTCCTGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLCPGVP*SPSCPR
Trigger: GCGAGGACAGGAGGGGGACAAGGGGACACCTGGGCA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS CCA 90 bp CTTCCATGTCCTCCGTCCAGTTGCGGCTGCTACTCGTGGGCGAGCTaGGCGAAGTGTAGTAATCGCCGCCAGGGCTCGTGTCCACGTCTT +
Preference number: 5 (lower is better)
Translates to: LPCPPSSCGCYSWAS*AKCSNRRQGSCPRL
Trigger: AAGACGTGGACACGAGCCCTGGCGGCGATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS CCA 90 bp AGATGCCTCCTTCCATGTCCTCCGTCCAGTTGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGTAGTAATCGCCGCCAGGGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: RCLLPCPPSSCGCYS*ASWAKCSNRRQGSC
Trigger: ACACGAGCCCTGGCGGCGATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACGGGGAGAGGTGGCCTaGCTGGGTGTCGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESARGEVA*LGVAPV
Trigger: GACAGGCGCGACACCCAGCAAGGCCACCTCTCCCCG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGCAGGGCAGGACGCTaGCGAAGTGACGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGRAGR*RSDAQL
Trigger: GAGCTGGGCGTCACTTCGCAAGCGTCCTGCCCTGCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGCCGGGGAGGGGTCCTaGTGTTTGAGCTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGAGEGS*CLSSVA
Trigger: GGCCACCGAGCTCAAACACAAGGACCCCTCCCCGGC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTGCTCCAGAACCTGTCTaGCAAGGGACAGTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: WPSSPAALASRELETLRLAPEPV*QGTVGC
Trigger: GCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGC...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGAGAGGTCAAAGTACCATaGGGGAGGCCAGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQREVKVP*GRPEWV
Trigger: TACCCACTCTGGCCTCCCCAATGGTACTTTGACCTC...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CTCCCGGAGAGCGGCCCACGCTTTGATCCCCAAGGGCCACCGGGGGAGCGGGCCTGGGAAAAGTCTGTTTaGGTATCACTGGCAACAAGT +
Preference number: 5 (lower is better)
Translates to: LPESGPRFDPQGPPGERAWEKSV*VSLATS
Trigger: ACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCA...GGCCCGCTCCCCCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCTCCGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGTGTGAGCAAAGCCTaGGGGAGGGGGCTGCCATGG +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGVSKA*GRGLPW
Trigger: CCATGGCAGCCCCCTCCCCAAGGCTTTGCTCACACC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGCCTGTGTCCCCTTTTaGGAGGGCTCTCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFACVPF*EGSLPA
Trigger: GGCTGGAAGAGAGCCCTCCAAAAAGGGGACACAGGC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTGCCCAGGTGTCCCCTaGTCCCCCTCCTGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGCPGVP*SPSCPR
Trigger: GCGAGGACAGGAGGGGGACAAGGGGACACCTGGGCA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS GCA 90 bp TCTTCACCGGGGACGAGATGCCTCCTTCCATGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCGAGCTGGGCGAAGTGTAGTAATCGC +
Preference number: 5 (lower is better)
Translates to: SSPGTRCLLPCPPSS*GCYSWASWAKCSNR
Trigger: GCGATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCTCGTCCCCGGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCAGCCCGGCGCCTTCTaGCCGGTGATGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESQPGAF*PVMLST
Trigger: CGTGCTGAGCATCACCGGCAAGAAGGCGCCGGGCTG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACAGCCCGGCGCCTTCTaGCCGGTGATGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAQPGAF*PVMLST
Trigger: CGTGCTGAGCATCACCGGCAAGAAGGCGCCGGGCTG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCGCACTGCGCAGCCTaGACCAGGCGCTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCPHCAA*TRRSPS
Trigger: CGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCCGGGGACTGCCGCTTaGCTCTGCATCTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGPGTAA*LCISLT
Trigger: CGTGAGCGAGATGCAGAGCAAAGCGGCAGTCCCCGG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCCCGATTTGTGCCGCTaGCTCCCACTGGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLPDLCR*LPLEEV
Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAATCGGG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCAGGACGGTCCAGGTaGCTGGCTGGCTGGGTCGCA +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPGRSR*LAGWVA
Trigger: TGCGACCCAGCCAGCCAGCAACCTGGACCGTCCTGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341919.7
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCCGGGGAGGGGTCCTaGTGTTTGAGCTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESAGEGS*CLSSVA
Trigger: GGCCACCGAGCTCAAACACAAGGACCCCTCCCCGGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGATGGCGAACCTCTCTaGGGGGTGATGGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVDGEPL*GVMGEG
Trigger: ACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGATGGCGAACCTCTCTaGGGGGTGATGGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQDGEPL*GVMGEG
Trigger: ACCCTCCCCCATCACCCCCAAGAGAGGTTCGCCATC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTAGGCGCCTGGGAATTTaGCCCTACAGGGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: WPSSPAALASRELETLRLRRLGI*PYRDPV
Trigger: TACAGGGTCCCTGTAGGGCAAAATTCCCAGGCGCCT...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACCCTTTGGCATTCCTTaGGGATCTGATTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRPFGIP*GSDCPA
Trigger: GGCTGGACAATCAGATCCCAAAGGAATGCCAAAGGG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATACAGCCCGGCGCCTTCTaGCCGGTGATGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIQPGAF*PVMLST
Trigger: CGTGCTGAGCATCACCGGCAAGAAGGCGCCGGGCTG...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCCGCACTGCGCAGCCTaGACCAGGCGCTCGCCGTCG +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGPHCAA*TRRSPS
Trigger: CGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCGGGGACTGCCGCTTaGCTCTGCATCTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPGTAA*LCISLT
Trigger: CGTGAGCGAGATGCAGAGCAAAGCGGCAGTCCCCGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAGGGTGTCCGGGACACTaGGATGAGCTCAGTGACGCT +
Preference number: 5 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQGCPGH*DELSDA
Trigger: AGCGTCACTGAGCTCATCCAAGTGTCCCGGACACCC...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCCCGATTTGTGCCGCTaGCTCCCACTGGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGPDLCR*LPLEEV
Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAATCGGG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGATGTCCTCCGTCCAGTaGCGGCTGCTACTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGMSSVQ*RLLLVG
Trigger: GCCCACGAGTAGCAGCCGCAACTGGACGGAGGACAT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAGGGGCCGGGGCCAATaGCATAGAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVRGRGQ*HRDFSS
Trigger: GGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCCT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGTCGGTGAATGGTGTCTGGGGGCCGGCCCGTGGCCTAGGGACCAATCAGAGACCCAGCTTAGTGTTTTaGGAGCGGCTCAACGGAAAA +
Preference number: 5 (lower is better)
Translates to: GSVNGVWGPARGLGTNQRPSLVF*ERLNGK
Trigger: TTTTCCGTTGAGCCGCTCCAAAAACACTAAGCTGGG...TCTCTGATTGGTCCCTAGGCCACGGGCCGGCCCCCAGACACCATTCACCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTAGAGCGGCCCACGCTTaGATCCCCAAGGGCCACCGG +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSRAAHA*IPKGHR
Trigger: CCGGTGGCCCTTGGGGATCAAAGCGTGGGCCGCTCT...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGTGGCCACCCCATGGTaGGAGGACAGCCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESVATPW*EDSLQW
Trigger: CCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCAC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTTCCCTTTGCCTCCGGTaGCTCCTAGTTCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFSLCLR*LLVPWQ
Trigger: TTGCCAAGGAACTAGGAGCAACCGGAGGCAAAGGGA...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCCTTTGCCTCCGGTaGCTCCTAGTTCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: WPSSPAALASRELETLRLSLCLR*LLVPWQ
Trigger: TTGCCAAGGAACTAGGAGCAACCGGAGGCAAAGGGA...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGCCTGGTATGGGCTTTaGCCTGCTGTACTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFAWYGL*PAVLSQ
Trigger: TTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTCTCCACCCGGGTCATaGTCAGGTGCCCCCACGGAA +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGSPPGS*SGAPTE
Trigger: TTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGCTCCAGAACCTGTCTaGCAAGGGACAGTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGAPEPV*QGTVGC
Trigger: GCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATGGAGGGCTGGACAGTaGCTCCTGGCTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQWRAGQ*LLAPEP
Trigger: AGGTTCTGGAGCCAGGAGCAACTGTCCAGCCCTCCA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCTGCTGGTACTGCTTaGGGTCCGCCTCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPAGTA*GPPPHL
Trigger: AAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTCGTGTCGTAGCACAGTaGCCATTTGACCGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: WPSSPAALASRELETLRLRVVAQ*PFDRGL
Trigger: GAGACCTCGGTCAAATGGCAACTGTGCTACGACACG...AAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGTCCAGCGGGATGCCCTaGAACAGGATGACCATGACC +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVSSGMP*NRMTMT
Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCGCTGGA...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATCCAGCGGGATGCCCTaGAACAGGATGACCATGACC +
Preference number: 5 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQSSGMP*NRMTMT
Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCGCTGGA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCCGGGGACTGCCGCTTaGCTCTGCATCTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSPGTAA*LCISLT
Trigger: CGTGAGCGAGATGCAGAGCAAAGCGGCAGTCCCCGG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTCCAGCGTGATGGGCTaGCTGTCCTCCTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGSSVMG*LSSWSE
Trigger: CTCTGACCAGGAGGACAGCAAGCCCATCACGCTGGA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTGGGTGTCCGGGACACTaGGATGAGCTCAGTGACGCT +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGGCPGH*DELSDA
Trigger: AGCGTCACTGAGCTCATCCAAGTGTCCCGGACACCC...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTCCCCCAGGGAGAAGTaGGGTCCTGTTCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGSPREK*GPVPVT
Trigger: GGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCCGATTTGTGCCGCTaGCTCCCACTGGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPDLCR*LPLEEV
Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAATCGGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCCGATTTGTGCCGCTaGCTCCCACTGGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPDLCR*LPLEEV
Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAATCGGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAATGTCCTCCGTCCAGTaGCGGCTGCTACTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAMSSVQ*RLLLVG
Trigger: GCCCACGAGTAGCAGCCGCAACTGGACGGAGGACAT...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGAGCGAGACAAGATCTTaGAGCGGGTCCTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVSETRS*SGSWGL
Trigger: CAACCCCCAGGACCCGCTCAAAGATCTTGTCTCGCT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCG +
Preference number: 5 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQPQRNG*QGTCRA
Trigger: CGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGG...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPQRNG*QGTCRA
Trigger: CGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATCCAGTCCTGCGGCCTaGGCGTCCCGAGAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESASSPAA*ASRELE
Trigger: TTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCGGGGAGAGGTGGCCTaGCTGGGTGTCGCGCCTGTC +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGRGEVA*LGVAPV
Trigger: GACAGGCGCGACACCCAGCAAGGCCACCTCTCCCCG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGAGGGGCCGGGGCCAATaGCATAGAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGRGRGQ*HRDFSS
Trigger: GGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCCT...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTAGGGGCCGGGGCCAATaGCATAGAGACTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRGRGQ*HRDFSS
Trigger: GGAGGAGAAGTCTCTATGCAATTGGCCCCGGCCCCT...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTGTGACTCGGTGCCACCTGGCTGTCCCTGTGCCCTGCCGGACCCTCGGCTGACAATTTGCATATATTaGGGAGGCCTCCCTATTCTT +
Preference number: 5 (lower is better)
Translates to: ACDSVPPGCPCALPDPRLTICIY*GGLPIL
Trigger: AAGAATAGGGAGGCCTCCCAAATATATGCAAATTGT...CAGCCGAGGGTCCGGCAGGGCACAGGGACAGCCAGGTGGCACCGAGTCACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCCTTTGGCATTCCTTaGGGATCTGATTGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPFGIP*GSDCPA
Trigger: GGCTGGACAATCAGATCCCAAAGGAATGCCAAAGGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCCTGCTGGTACTGCTTaGGGTCCGCCTCCTCACCTT +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGPAGTA*GPPPHL
Trigger: AAGGTGAGGAGGCGGACCCAAAGCAGTACCAGCAGG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS TCA 90 bp TTGGGATGCGTTAATGTGAGACACACCAGGCCACTCTCAACTAAGTaGCCACCCACAGCCCGGCGAGGCTGTCACAGGCCGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LGCVNVRHTRPLSTK*PPTARRGCHRPCVC
Trigger: ACACACACACGGCCTGTGACAGCCTCGCCGGGCTGTGGGTGGTCACTTAGTTGAGAGTGGCCTGGTGTGTCTCACATTAACGCATCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATCAGCCCGGCGCCTTCTaGCCGGTGATGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINQPGAF*PVMLST
Trigger: CGTGCTGAGCATCACCGGCAAGAAGGCGCCGGGCTG...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGTCCAGCGGGATGCCCTaGAACAGGATGACCATGACC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGSSGMP*NRMTMT
Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCGCTGGA...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAACCGGGGACTGCCGCTTaGCTCTGCATCTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: GRGKKTFAIPDTRTVPDKPGTAA*LCISLT
Trigger: CGTGAGCGAGATGCAGAGCAAAGCGGCAGTCCCCGG...TTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTCCAGCGTGATGGGCTaGCTGTCCTCCTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSSVMG*LSSWSE
Trigger: CTCTGACCAGGAGGACAGCAAGCCCATCACGCTGGA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGGGTGTCCGGGACACTaGGATGAGCTCAGTGACGCT +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESGCPGH*DELSDA
Trigger: AGCGTCACTGAGCTCATCCAAGTGTCCCGGACACCC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGGGTGTCCGGGACACTaGGATGAGCTCAGTGACGCT +
Preference number: 5 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQGCPGH*DELSDA
Trigger: AGCGTCACTGAGCTCATCCAAGTGTCCCGGACACCC...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTCCCCCAGGGAGAAGTaGGGTCCTGTTCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSPREK*GPVPVT
Trigger: GGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGTCCCCCAGGGAGAAGTaGGGTCCTGTTCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQSPREK*GPVPVT
Trigger: GGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGA...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAAATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 5 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTTGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGCPQDP*VLIPQR
Trigger: CCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCA...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGCAGGGCAGGACGCTaGCGAAGTGACGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGRAGR*RSDAQL
Trigger: GAGCTGGGCGTCACTTCGCAAGCGTCCTGCCCTGCC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGCCTGGTATGGGCTTTaGCCTGCTGTACTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVAWYGL*PAVLSQ
Trigger: TTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTCTCCACCCGGGTCATaGTCAGGTGCCCCCACGGAA +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSSPPGS*SGAPTE
Trigger: TTCCGTGGGGGCACCTGACAATGACCCGGGTGGAGA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCAACCGAGTCCCCTTaGGCATTCCTTTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPTESP*AFLWDL
Trigger: CAGATCCCAAAGGAATGCCAAAGGGGACTCGGTTGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGCAGGGAAGGTGGAATaGTCTGCTGCCTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAAGKVE*SAAWGP
Trigger: AGGTCCCCAGGCAGCAGACAATTCCACCTTCCCTGC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGAGGTCAAAGTACCATaGGGGAGGCCAGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGEVKVP*GRPEWV
Trigger: TACCCACTCTGGCCTCCCCAATGGTACTTTGACCTC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGAGGTCAAAGTACCATaGGGGAGGCCAGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLEVKVP*GRPEWV
Trigger: TACCCACTCTGGCCTCCCCAATGGTACTTTGACCTC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGCGGAGGAAGCTGGATaGAGAGATGTATGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVAEEAG*RDVCPS
Trigger: GCTGGGACATACATCTCTCAATCCAGCTTCCTCCGC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGCCACACTCTGTACCATaGAGCAATGGATGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVPHSVP*SNGWAA
Trigger: CGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGG...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGCCTGTGTCCCCTTTTaGGAGGGCTCTCTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAACVPF*EGSLPA
Trigger: GGCTGGAAGAGAGCCCTCCAAAAAGGGGACACAGGC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGTCCAGCGGGATGCCCTaGAACAGGATGACCATGACC +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSSGMP*NRMTMT
Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCGCTGGA...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTCCAGCGGGATGCCCTaGAACAGGATGACCATGACC +
Preference number: 5 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDSSGMP*NRMTMT
Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCGCTGGA...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATATCCAGCGTGATGGGCTaGCTGTCCTCCTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLISSVMG*LSSWSE
Trigger: CTCTGACCAGGAGGACAGCAAGCCCATCACGCTGGA...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp AGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAGGGTGTCCGGGACACTaGGATGAGCTCAGTGACGCT +
Preference number: 5 (lower is better)
Translates to: RGEGRRPLLSQIPGLCLIGCPGH*DELSDA
Trigger: AGCGTCACTGAGCTCATCCAAGTGTCCCGGACACCC...TATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCCCCGATTTGTGCCGCTaGCTCCCACTGGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GRRPLLSQIPGLCLINARPDLCR*LPLEEV
Trigger: CACCTCCTCCAGTGGGAGCAAGCGGCACAAATCGGG...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGAGCGAGACAAGATCTTaGAGCGGGTCCTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESSETRS*SGSWGL
Trigger: CAACCCCCAGGACCCGCTCAAAGATCTTGTCTCGCT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGAGCGAGACAAGATCTTaGAGCGGGTCCTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQSETRS*SGSWGL
Trigger: CAACCCCCAGGACCCGCTCAAAGATCTTGTCTCGCT...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCG +
Preference number: 5 (lower is better)
Translates to: GRRPLLSQIPGLCLINARPQRNG*QGTCRA
Trigger: CGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGG...GCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDCPQDP*VLIPQR
Trigger: CCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCA...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGGGCAGCGGTGTCATTTaGAAGGTGAGACTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLGSGVI*KVRLSG
Trigger: TCCTGAGAGTCTCACCTTCAAAATGACACCGCTGCC...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGCAGCGGTGTCATTTaGAAGGTGAGACTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGSGVI*KVRLSG
Trigger: TCCTGAGAGTCTCACCTTCAAAATGACACCGCTGCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTGGTGTGAGCAAAGCCTaGGGGAGGGGGCTGCCATGG +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGGVSKA*GRGLPW
Trigger: CCATGGCAGCCCCCTCCCCAAGGCTTTGCTCACACC...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCAGCCCGGCGCCTTCTaGCCGGTGATGCTCAGCACG +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCQPGAF*PVMLST
Trigger: CGTGCTGAGCATCACCGGCAAGAAGGCGCCGGGCTG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTCCAGCGTGATGGGCTaGCTGTCCTCCTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCSSVMG*LSSWSE
Trigger: CTCTGACCAGGAGGACAGCAAGCCCATCACGCTGGA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGGGTGTCCGGGACACTaGGATGAGCTCAGTGACGCT +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCGCPGH*DELSDA
Trigger: AGCGTCACTGAGCTCATCCAAGTGTCCCGGACACCC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTATGTCCTCCGTCCAGTaGCGGCTGCTACTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGMSSVQ*RLLLVG
Trigger: GCCCACGAGTAGCAGCCGCAACTGGACGGAGGACAT...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCATGTCCTCCGTCCAGTaGCGGCTGCTACTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: EGRRPLLSQIPGLCLINAMSSVQ*RLLLVG
Trigger: GCCCACGAGTAGCAGCCGCAACTGGACGGAGGACAT...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCG +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGPQRNG*QGTCRA
Trigger: CGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSCPQDP*VLIPQR
Trigger: CCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCTTGGCGTCCCGAGAGTaGGAAACGTTGCGTCTTTAC +
Preference number: 5 (lower is better)
Translates to: PGTMEKGRGKKTFAIPDTLASRE*ETLRLY
Trigger: GTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA...GGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTTCCAGTCCTGCGGCCTaGGCGTCCCGAGAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGSSPAA*ASRELE
Trigger: TTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGA...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGTGGCCACCCCATGGTaGGAGGACAGCCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLVATPW*EDSLQW
Trigger: CCACTGCAGGCTGTCCTCCAACCATGGGGTGGCCAC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCCTGGTATGGGCTTTaGCCTGCTGTACTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESAWYGL*PAVLSQ
Trigger: TTGGCTGAGTACAGCAGGCAAAAGCCCATACCAGGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACCAACCGAGTCCCCTTaGGCATTCCTTTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAPTESP*AFLWDL
Trigger: CAGATCCCAAAGGAATGCCAAAGGGGACTCGGTTGG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGCAGGGAAGGTGGAATaGTCTGCTGCCTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCAGKVE*SAAWGP
Trigger: AGGTCCCCAGGCAGCAGACAATTCCACCTTCCCTGC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTGGAGGGCTGGACAGTaGCTCCTGGCTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCWRAGQ*LLAPEP
Trigger: AGGTTCTGGAGCCAGGAGCAACTGTCCAGCCCTCCA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCGGAGGAAGCTGGATaGAGAGATGTATGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESAEEAG*RDVCPS
Trigger: GCTGGGACATACATCTCTCAATCCAGCTTCCTCCGC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCACACTCTGTACCATaGAGCAATGGATGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPHSVP*SNGWAA
Trigger: CGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCCCTGGAGCCCTTGCTaGTTCTTTCTCTGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGPWSPC*FFLCVR
Trigger: TCTCACACAGAGAAAGAACAAGCAAGGGCTCCAGGG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCGGAAAATGTTTTGTTTaGTCCCTCCCTCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGGKCFV*SLPPPS
Trigger: GCTGGGAGGAGGGAGGGACAAAACAAAACATTTTCC...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTCCAAAGGAAAATGTTTaGTTTTGTCCCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFPKENV*FCPSLL
Trigger: GAGGAGGGAGGGACAAAACAAAACATTTTCCTTTGG...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATTCCAGCGTGATGGGCTaGCTGTCCTCCTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GEGRRPLLSQIPGLCLINSSVMG*LSSWSE
Trigger: CTCTGACCAGGAGGACAGCAAGCCCATCACGCTGGA...ATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCTCCCCCAGGGAGAAGTaGGGTCCTGTTCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: EGRRPLLSQIPGLCLINASPREK*GPVPVT
Trigger: GGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGA...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCAGCGAGACAAGATCTTaGAGCGGGTCCTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCSETRS*SGSWGL
Trigger: CAACCCCCAGGACCCGCTCAAAGATCTTGTCTCGCT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESAVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGTGCGTCTATGTGTTTaGTCTTTTTGGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESVRLCV*SFWPGW
Trigger: CCAGCCCGGCCAAAAAGACAAAACACATAGACGCAC...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCCPQDP*VLIPQR
Trigger: CCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCA...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCATTGGCGTCCCGAGAGTaGGAAACGTTGCGTCTTTAC +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESALASRE*ETLRLY
Trigger: GTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGTGTGGAACAGCATTaGACCCTGAGCCAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSGVEQH*TLSQGY
Trigger: ATACCCCTGGCTCAGGGTCAAATGCTGTTCCACACC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTTGGCAAGACAGATTaGCTCAGGAGTGGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESALGKTD*LRSGAE
Trigger: TTCTGCCCCACTCCTGAGCAAATCTGTCTTGCCAAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGGTTGCTCCTAGTTCCTaGGCAAGACAGATTTGCTCA +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVVAPSS*ARQICS
Trigger: TGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAAC...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCTGCTTCCTGGTGTTTTaGTCTTACTCTGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGCFLVF*SYSVCS
Trigger: GCTGCAGACAGAGTAAGACAAAAACACCAGGAAGCA...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGTGCTTCCTGGTGTTTTaGTCTTACTCTGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLCFLVF*SYSVCS
Trigger: GCTGCAGACAGAGTAAGACAAAAACACCAGGAAGCA...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGCCCTCCAGTCCTGCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTGGGGTGGAACAAGATTaGAGAAGATGTCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: GPPVLRPWRPESWKRCVFGVEQD*RRCQFH
Trigger: ATGAAACTGACATCTTCTCAAATCTTGTTCCACCCC...AAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGCAGGACTGGAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCGGAATGGGGACAATTaGCATATATTTGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLRNGDN*HIFGRP
Trigger: AGGCCTCCCAAATATATGCAAATTGTCCCCATTCCG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTCCACACTCTGTACCATaGAGCAATGGATGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSPHSVP*SNGWAA
Trigger: CGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGG...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCCCTGGAGCCCTTGCTaGTTCTTTCTCTGTGTGAGA +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESPWSPC*FFLCVR
Trigger: TCTCACACAGAGAAAGAACAAGCAAGGGCTCCAGGG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGGAAAATGTTTTGTTTaGTCCCTCCCTCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGGKCFV*SLPPPS
Trigger: GCTGGGAGGAGGGAGGGACAAAACAAAACATTTTCC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTCCCCCAGGGAGAAGTaGGGTCCTGTTCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLSPREK*GPVPVT
Trigger: GGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTAGGAGCGAGCGGGTTCGCCAAGCTCCTGAGGCTAGTTTGGGAGGAGAGTCTGCTGTTGAATGGTGACTaGTCCATCTCTGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGASGFAKLLRLVWEESLLLNGD*SISVFF
Trigger: GAAGAAGACAGAGATGGACAAGTCACCATTCAACAG...CAGACTCTCCTCCCAAACTAGCCTCAGGAGCTTGGCGAACCCGCTCGCTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGGTGTGGAACAGCATTaGACCCTGAGCCAGGGGTAT +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCGVEQH*TLSQGY
Trigger: ATACCCCTGGCTCAGGGTCAAATGCTGTTCCACACC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGGTTGCTCCTAGTTCCTaGGCAAGACAGATTTGCTCA +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGVAPSS*ARQICS
Trigger: TGAGCAAATCTGTCTTGCCAAGGAACTAGGAGCAAC...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGCAGGGAAGGTGGAATaGTCTGCTGCCTGGGGACCT +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLAGKVE*SAAWGP
Trigger: AGGTCCCCAGGCAGCAGACAATTCCACCTTCCCTGC...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCATGTGAGGCACTGCTaGGGAAAAGTCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGHVRHC*GKVCFG
Trigger: ACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TGCAGCCAAGTCTGTCTGTGCCTGGAATGCTGCTGTCTCTCAAGGTCCTGGGGCCCAAAGGAAAATGTTTaGTTTTGTCCCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CSQVCLCLECCCLSRSWGPKENV*FCPSLL
Trigger: GAGGAGGGAGGGACAAAACAAAACATTTTCCTTTGG...GCCCCAGGACCTTGAGAGACAGCAGCATTCCAGGCACAGACAGACTTGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCGAGAGGCAGGAGGGCTaGGGATGCGTTAATGTGAGA +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCERQEG*GCVNVR
Trigger: TCTCACATTAACGCATCCCAAGCCCTCCTGCCTCTC...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTCCAGCGGGATGCCCTaGAACAGGATGACCATGACC +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLSSGMP*NRMTMT
Trigger: GGTCATGGTCATCCTGTTCAAGGGCATCCCGCTGGA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTCCCCCAGGGAGAAGTaGGGTCCTGTTCCAGTCACC +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCSPREK*GPVPVT
Trigger: GGTGACTGGAACAGGACCCAACTTCTCCCTGGGGGA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCAGGGCTGTTGAATGGTGACTaGTCCATCTCTGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ECVRLCVLSFWPGWESAGLLNGD*SISVFF
Trigger: GAAGAAGACAGAGATGGACAAGTCACCATTCAACAG...CCCTGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTGTGCCTGATAAATGCCATGTGTTTTGTCTTTTaGGCCGGGCTGGGAGTCGGC +
Preference number: 5 (lower is better)
Translates to: EGRRPLLSQIPGLCLINAMCFVF*AGLGVG
Trigger: GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACAT...GGCATTTATCAGGCACAGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CAA 90 bp GTCCTCTGGGCAAGGGATTCAGAAATGACCCCTCTGGGTACCCAAGAGCAGGGTCGAGAGTTGGAAACGTaGCGTCTTTACCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: VLWARDSEMTPLGTQEQGRELET*RLYLLS
Trigger: AGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCG...ACCCTGCTCTTGGGTACCCAGAGGGGTCATTTCTGAATCCCTTGCCCAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGAGGCGCCTGGGAATTTaGCCCTACAGGGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLRRLGI*PYRDPV
Trigger: TACAGGGTCCCTGTAGGGCAAAATTCCCAGGCGCCT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGGAATGGGGACAATTaGCATATATTTGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRNGDN*HIFGRP
Trigger: AGGCCTCCCAAATATATGCAAATTGTCCCCATTCCG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGGGTCCAACCGAGTCCCCTTaGGCATTCCTTTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: ASRELETLRLYLLSSCLGPTESP*AFLWDL
Trigger: CAGATCCCAAAGGAATGCCAAAGGGGACTCGGTTGG...ACCCAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGAAAATGTTTTGTTTaGTCCCTCCCTCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSGKCFV*SLPPPS
Trigger: GCTGGGAGGAGGGAGGGACAAAACAAAACATTTTCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGGCACTGTTGAATGGTGACTaGTCCATCTCTGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PECVRLCVLSFWPGWESALLNGD*SISVFF
Trigger: GAAGAAGACAGAGATGGACAAGTCACCATTCAACAG...TGCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACCTGTTGAATGGTGACTaGTCCATCTCTGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDLLNGD*SISVFF
Trigger: GAAGAAGACAGAGATGGACAAGTCACCATTCAACAG...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS-3UTR CAA 90 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGCGAGAGTTGGAAACGTaGCGTCTTTACCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: WDDGEGAREEDLCYPRYQRELET*RLYLLS
Trigger: AGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCG...CTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CAA 90 bp CCTCCTGAGTGTGTGCGTCTATGTGTTTTGTCTTTTTGGCCGGGCTGGGAGTCGCGAGAGTTGGAAACGTaGCGTCTTTACCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: PPECVRLCVLSFWPGWESRELET*RLYLLS
Trigger: AGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCG...CGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAGGCGCCTGGGAATTTaGCCCTACAGGGACCCTGTA +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRRLGI*PYRDPV
Trigger: TACAGGGTCCCTGTAGGGCAAAATTCCCAGGCGCCT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTCCTGGTGTTTTaGTCTTACTCTGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSCFLVF*SYSVCS
Trigger: GCTGCAGACAGAGTAAGACAAAAACACCAGGAAGCA...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GGTGGTGGACTGACCCCACACTCTGTACCATTGAGCAATGGATGGGCAGCGGTGACAATTTGCATATATTaGGGAGGCCTCCCTATTCTT +
Preference number: 5 (lower is better)
Translates to: GGGLTPHSVPLSNGWAAVTICIY*GGLPIL
Trigger: AAGAATAGGGAGGCCTCCCAAATATATGCAAATTGT...CACCGCTGCCCATCCATTGCTCAATGGTACAGAGTGTGGGGTCAGTCCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp CAGTTGCTCCTGGCTCCAGAACCTGTCTTGCAAGGGACAGTGGGGTGCAGCCAATTACCTTTTGTCTTCTaGCTTGGGTGGGTTTTTATT +
Preference number: 5 (lower is better)
Translates to: QLLLAPEPVLQGTVGCSQLPFVF*LGWVFI
Trigger: AATAAAAACCCACCCAAGCAAGAAGACAAAAGGTAA...TTGGCTGCACCCCACTGTCCCTTGCAAGACAGGTTCTGGAGCCAGGAGCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGAGGGGTCCTTGTGTTaGAGCTCGGTGGCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCEGSLC*SSVALK
Trigger: TTTTAGGGCCACCGAGCTCAAACACAAGGACCCCTC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCAGGTCGCAGGAGTCCTaGACTAAGCACCATGCAAAG +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRSQES*TKHHAK
Trigger: CTTTGCATGGTGCTTAGTCAAGGACTCCTGCGACCT...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCGGCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTGGGGTGGAACAAGATTaGAGAAGATGTCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: AALASRELETLRLYLLSSGVEQD*RRCQFH
Trigger: ATGAAACTGACATCTTCTCAAATCTTGTTCCACCCC...AGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GCCTTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCCCAAAGGAAAATGTTTaGTTTTGTCCCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALASRELETLRLYLLSSCPKENV*FCPSLL
Trigger: GAGGAGGGAGGGACAAAACAAAACATTTTCCTTTGG...GCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp GACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTGCTATCCCAGATACCAGGACTTACCTTTTGTCTTCTaGCTTGGGTGGGTTTTTATT +
Preference number: 5 (lower is better)
Translates to: DDGEGAREEDLCYPRYQDLPFVF*LGWVFI
Trigger: AATAAAAACCCACCCAAGCAAGAAGACAAAAGGTAA...GTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395111.7
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGCTGTTGAATGGTGACTaGTCCATCTCTGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLLLNGD*SISVFF
Trigger: GAAGAAGACAGAGATGGACAAGTCACCATTCAACAG...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCATGTGAGGCACTGCTaGGGAAAAGTCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCHVRHC*GKVCFG
Trigger: ACCAAAACAGACTTTTCCCAAGCAGTGCCTCACATG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCCGAGAGTTGGAAACGTaGCGTCTTTACCTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCRELET*RLYLLS
Trigger: AGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCG...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCGGGGTGGAACAAGATTaGAGAAGATGTCAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCGVEQD*RRCQFH
Trigger: ATGAAACTGACATCTTCTCAAATCTTGTTCCACCCC...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGACAATTTGCATATATTaGGGAGGCCTCCCTATTCTT +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLTICIY*GGLPIL
Trigger: AAGAATAGGGAGGCCTCCCAAATATATGCAAATTGT...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp ACTTTCTGTAAATGGTACTTAGGTAGGCGCGTCCGCGAAAACCAAAATGACTGCTGGGAAAAGTCTGTTTaGGTATCACTGGCAACAAGT +
Preference number: 5 (lower is better)
Translates to: TFCKWYLGRRVRENQNDCWEKSV*VSLATS
Trigger: ACTTGTTGCCAGTGATACCAAAACAGACTTTTCCCA...GCAGTCATTTTGGTTTTCGCGGACGCGCCTACCTAAGTACCATTTACAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS-3UTR CAA 90 bp TTGGCGTCCCGAGAGTTGGAAACGTTGCGTCTTTACCTTTTGTCTTCTTGCTTGTTACCTTTTGTCTTCTaGCTTGGGTGGGTTTTTATT +
Preference number: 5 (lower is better)
Translates to: LASRELETLRLYLLSSCLLPFVF*LGWVFI
Trigger: AATAAAAACCCACCCAAGCAAGAAGACAAAAGGTAA...CAAGCAAGAAGACAAAAGGTAAAGACGCAACGTTTCCAACTCTCGGGACGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000641145.1
CDS CCA 72 bp GGCCCCGAATCGCCTTATGGGGACCGGAGTGCGGGCTaGGCCGGCCGCCTGGGAGGCAGGTCCGGGCACCCG +
Preference number: 6 (lower is better)
Translates to: GPESPYGDRSAG*AGRLGGRSGHP
Trigger: CGGGTGCCCGGACCTGCCTCCCAGGCGGCCGGCCCAGCCCGCACTCCGGTCCCCATAAGGCGATTCGGGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS TCA 72 bp GCACGCACAGGACCGGGTGACCGCACTGCGCAGCCTTaGCCAGGCGCTCGCCGTCGGTGCTCTCCAGCGGGA +
Preference number: 6 (lower is better)
Translates to: ARTGPGDRTAQP*PGARRRCSPAG
Trigger: TCCCGCTGGAGAGCACCGACGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS GCA 72 bp GCGGACATCCGCCCCACCAGGGCACCGCTTCCCGCGTaGTTACAAGGCGAGGTCGGCGACGTGGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: ADIRPTRAPLPA*LQGEVGDVAPP
Trigger: GGGAGGAGCCACGTCGCCGACCTCGCCTTGTAAGCACGCGGGAAGCGGTGCCCTGGTGGGGCGGATGTCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589969.1
CDS TCA 72 bp ACGCCAATGTGGTGCGGCTGCACGCACAGGACCGGGTaGCCGCACTGCGCAGCCTTGACCAGGCGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: TPMWCGCTHRTG*PHCAALTRRSP
Trigger: CGGCGAGCGCCTGGTCAAGGCTGCGCAGTGCGGTCACCCGGTCCTGTGCGTGCAGCCGCACCACATTGGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS CCA 72 bp ATCCCGCTGTGCACGGCGATGACGGGCCGGTGGTGCTaGGTGAAGCTGGAGAGGCGGGGAGAGTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: IPLCTAMTGRWC*VKLERRGESWG
Trigger: CCCCCAGGACTCTCCCCGCCTCTCCAGCTTCACCCAGCACCACCGGCCCGTCATCGCCGTGCACAGCGGGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS CCA 72 bp TGTCGGGCGGAGAGTAGGAAGGCGAGGTCGGCGACGTaGCTCCTCCCTCGGAGGTGGTGGCGGGTTTGGTGG +
Preference number: 6 (lower is better)
Translates to: CRAESRKARSAT*LLPRRWWRVWW
Trigger: CCACCAAACCCGCCACCACCTCCGAGGGAGGAGCCACGTCGCCGACCTCGCCTTCCTACTCTCCGCCCGACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000589164.1
ENST00000641145.1
CDS CCA 72 bp CGCTTCCCGCGTGCTTACAAGGCGAGGTCGGCGACGTaGCTCCTCCCTCGGAGGTGGTGGCGGGTTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RFPRAYKARSAT*LLPRRWWRVWW
Trigger: CCACCAAACCCGCCACCACCTCCGAGGGAGGAGCCACGTCGCCGACCTCGCCTTGTAAGCACGCGGGAAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589969.1
CDS CCA 72 bp GGACGTCGTAGGGAAATGCAGAGCGGAGGACGGGTGTaGGCTCCGGGCGATCCCGCTGTGCACGGCGATGAC +
Preference number: 6 (lower is better)
Translates to: GRRREMQSGGRV*APGDPAVHGDD
Trigger: GTCATCGCCGTGCACAGCGGGATCGCCCGGAGCCCACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS GCA 72 bp GAGGCCGTCTGGGGTAGGATGGACGTCGTAGGGAAATaGAGAGCGGAGGACGGGTGTGGGCTCCGGGCGATC +
Preference number: 6 (lower is better)
Translates to: EAVWGRMDVVGK*RAEDGCGLRAI
Trigger: GATCGCCCGGAGCCCACACCCGTCCTCCGCTCTGCATTTCCCTACGACGTCCATCCTACCCCAGACGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS CCA 72 bp GGACGTGTCGGGCGGAGAGTAGGCGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCCAGCGAGACAAGATCT +
Preference number: 6 (lower is better)
Translates to: GRVGRRVGGPGC*LAGSQASETRS
Trigger: AGATCTTGTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGCCTACTCTCCGCCCGACACGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395111.7
ENST00000586919.5
ENST00000590282.5
CDS TCA 72 bp GCCGCCTGGGAGGCAGGTCCGGGCACCCGGCTTCCATaGTGCCGTCACACAAGCAGCTTTTCTCTGGGGAGT +
Preference number: 6 (lower is better)
Translates to: AAWEAGPGTRLP*CRHTSSFSLGS
Trigger: ACTCCCCAGAGAAAAGCTGCTTGTGTGACGGCATCATGGAAGCCGGGTGCCCGGACCTGCCTCCCAGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS CCA 72 bp CCTCCGTCCAGTTGCGGCTGCTACTCGTGGGCGAGCTaGGCGAAGTGTAGTAATCGCCGCCAGGGCTCGTGT +
Preference number: 6 (lower is better)
Translates to: PPSSCGCYSWAS*AKCSNRRQGSC
Trigger: ACACGAGCCCTGGCGGCGATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS CAA 72 bp GGGGACGAGATGCCTCCTTCCATGTCCTCCGTCCAGTaGCGGCTGCTACTCGTGGGCGAGCTGGGCGAAGTG +
Preference number: 6 (lower is better)
Translates to: GDEMPPSMSSVQ*RLLLVGELGEV
Trigger: CACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCTCGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS TCA 72 bp CACGCACGAAGTAGGCCAGGTAGAGGTCCAGCTCCTTaGCGGCCACGCCAATGTGGTGCGGCTGCACGCACA +
Preference number: 6 (lower is better)
Translates to: HARSRPGRGPAP*RPRQCGAAART
Trigger: TGTGCGTGCAGCCGCACCACATTGGCGTGGCCGTCAAGGAGCTGGACCTCTACCTGGCCTACTTCGTGCGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS GCA 72 bp GGGACGAGATGCCTCCTTCCATGTCCTCCGTCCAGTTaGGGCTGCTACTCGTGGGCGAGCTGGGCGAAGTGT +
Preference number: 6 (lower is better)
Translates to: GTRCLLPCPPSS*GCYSWASWAKC
Trigger: ACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCTCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS CCA 72 bp CTTCCATGTCCTCCGTCCAGTTGCGGCTGCTACTCGTaGGCGAGCTGGGCGAAGTGTAGTAATCGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: LPCPPSSCGCYS*ASWAKCSNRRQ
Trigger: CTGGCGGCGATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS CCA 72 bp TCCCAGATACCAGGACGGTCCAGGTTGCTGGCTGGCTaGGTCGCAGGCCAGCGAGACAAGATCTTTGAGCGG +
Preference number: 6 (lower is better)
Translates to: SQIPGRSRLLAG*VAGQRDKIFER
Trigger: CCGCTCAAAGATCTTGTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGTCCTGGTATCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341919.7
ENST00000589537.1
CDS CCA 72 bp GAGTTCCAGCCCCAGCACAACCTGGCCATGTGGCTCTaGACCAGTCACCTCCTCTGTCGGAGCCTCCAACCT +
Preference number: 6 (lower is better)
Translates to: EFQPQHNLAMWL*TSHLLCRSLQP
Trigger: AGGTTGGAGGCTCCGACAGAGGAGGTGACTGGTCCAGAGCCACATGGCCAGGTTGTGCTGGGGCTGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS CCA 72 bp TCGATGGAGTTCCAGCCCCAGCACAACCTGGCCATGTaGCTCTGGACCAGTCACCTCCTCTGTCGGAGCCTC +
Preference number: 6 (lower is better)
Translates to: SMEFQPQHNLAM*LWTSHLLCRSL
Trigger: GAGGCTCCGACAGAGGAGGTGACTGGTCCAGAGCCACATGGCCAGGTTGTGCTGGGGCTGGAACTCCATCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS CCA 72 bp GGCTTCCATGATGCCGTCACACAAGCAGCTTTTCTCTaGGGAGTCGGAGGAGGGTGCCGGGGACACTGGGAG +
Preference number: 6 (lower is better)
Translates to: GFHDAVTQAAFL*GVGGGCRGHWE
Trigger: CTCCCAGTGTCCCCGGCACCCTCCTCCGACTCCCCAGAGAAAAGCTGCTTGTGTGACGGCATCATGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS CAA 90 bp AAATGCCCGCAGGATCCCTTGGTCCTAATCCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCGGAGAGTAGGAAGGCGAGGTCGGCG +
Preference number: 6 (lower is better)
Translates to: KCPQDPLVLIPQRNG*QGTCRAESRKARSA
Trigger: CGCCGACCTCGCCTTCCTACTCTCCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000589164.1
ENST00000641145.1
CDS CCA 72 bp GTGACGCTGAACACGCCGGAGGTGACAAAGCTCTCCTaGAAGTCGGTCGTGTCCAGCGTGATGGGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VTLNTPEVTKLS*KSVVSSVMGLL
Trigger: CAGCAAGCCCATCACGCTGGACACGACCGACTTCCAGGAGAGCTTTGTCACCTCCGGCGTGTTCAGCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS CCA 72 bp CTAAGGCTGCCTCAGCCCTACATGGGCCCAACCACGTaGCCACTGGGCTGTTTTCCGGAGACCCACCAAACT +
Preference number: 6 (lower is better)
Translates to: LRLPQPYMGPTT*PLGCFPETHQT
Trigger: AGTTTGGTGGGTCTCCGGAAAACAGCCCAGTGGCCACGTGGTTGGGCCCATGTAGGGCTGAGGCAGCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589969.1
CDS CCA 72 bp TCTCCACAAACAAAAGACCAGTCTGGGGGTCGAGTCTaGCCCTCGGGCCGCCACTGTGAGATCCGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: SPQTKDQSGGRV*PSGRHCEIRVH
Trigger: GTGGACACGGATCTCACAGTGGCGGCCCGAGGGCCAGACTCGACCCCCAGACTGGTCTTTTGTTTGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589969.1
CDS CCA 72 bp ACCTGCGTTCGATGGAGTTCCAGCCCCAGCACAACCTaGCCATGTGGCTCTGGACCAGTCACCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: TCVRWSSSPSTT*PCGSGPVTSSV
Trigger: GACAGAGGAGGTGACTGGTCCAGAGCCACATGGCCAGGTTGTGCTGGGGCTGGAACTCCATCGAACGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS CCA 72 bp TTTCTCTGGGGAGTCGGAGGAGGGTGCCGGGGACACTaGGAGCTGGAGAGCATAGACGAGAGAGTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: FLWGVGGGCRGH*ELESIDERVRE
Trigger: CTCTCTCACTCTCTCGTCTATGCTCTCCAGCTCCCAGTGTCCCCGGCACCCTCCTCCGACTCCCCAGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS CAA 72 bp CAGGATCCCTTGGTCCTAATCCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCGGAGAGTAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: QDPLVLIPQRNG*QGTCRAESRRS
Trigger: GGACCGCCTACTCTCCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS CAA 90 bp AAATGCCCGCAGGATCCCTTGGTCCTAATCCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCGGAGAGTAGGCGGTCCAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: KCPQDPLVLIPQRNG*QGTCRAESRRSRLL
Trigger: CAGCAACCTGGACCGCCTACTCTCCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395111.7
ENST00000590282.5
CDS CCA 72 bp CTTTGCTATCCCAGATACCAGGACGGTCCAGGTTGCTaGCTGGCTGGGTCGCAGGCCAGCGAGACAAGATCT +
Preference number: 6 (lower is better)
Translates to: LCYPRYQDGPGC*LAGSQASETRS
Trigger: AGATCTTGTCTCGCTGGCCTGCGACCCAGCCAGCCAGCAACCTGGACCGTCCTGGTATCTGGGATAGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341919.7
ENST00000589537.1
CDS CCA 72 bp TGGAAACAAGGGCTGCACCCTGAAACCTGCGTTCGATaGAGTTCCAGCCCCAGCACAACCTGGCCATGTGGC +
Preference number: 6 (lower is better)
Translates to: WKQGLHPETCVR*SSSPSTTWPCG
Trigger: GCCACATGGCCAGGTTGTGCTGGGGCTGGAACTCCATCGAACGCAGGTTTCAGGGTGCAGCCCTTGTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS CAA 72 bp CAGGATCCCTTGGTCCTAATCCCACAAAGGAACGGTTaGCAGGGGACGTGTCGGGCGGAGAGTAGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: QDPLVLIPQRNG*QGTCRAESRKA
Trigger: CGCCTTCCTACTCTCCGCCCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443272.3
ENST00000589123.5
ENST00000589164.1
ENST00000641145.1
CDS CAA 90 bp GCTGGTTTTGCGGAGCCTGTGCCTGATAAATGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGGAACGGTTTGCAGGGGACGTGTCGG +
Preference number: 6 (lower is better)
Translates to: AGFAEPVPDKCPQDP*VLIPQRNGLQGTCR
Trigger: CCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCATTTATCAGGCACAGGCTCCGCAAAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589164.1
CDS GCA 72 bp AGATGCCTCCTTCCATGTCCTCCGTCCAGTTGCGGCTaGTACTCGTGGGCGAGCTGGGCGAAGTGTAGTAAT +
Preference number: 6 (lower is better)
Translates to: RCLLPCPPSSCG*YSWASWAKCSN
Trigger: ATTACTACACTTCGCCCAGCTCGCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341919.7
ENST00000395111.7
ENST00000443272.3
ENST00000586919.5
ENST00000589123.5
ENST00000589537.1
ENST00000590282.5
ENST00000641145.1
CDS GCA 72 bp TGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTTaGTATCCCAGATACCAGGACGGTCCAGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: WDDGEGAREEDL*YPRYQDGPGCW
Trigger: CCAGCAACCTGGACCGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341919.7
ENST00000589537.1
CDS GCA 72 bp GGCGTTTCCAATCGCTGCCTTACCTTCCCGTTCTGTTaGTATGCTCAGAGGAGCTTACGGAGGGGACGGGGA +
Preference number: 6 (lower is better)
Translates to: GVSNRCLTFPFC*YAQRSLRRGRG
Trigger: TCCCCGTCCCCTCCGTAAGCTCCTCTGAGCATAGCAACAGAACGGGAAGGTAAGGCAGCGATTGGAAACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS CAA 72 bp CTGGGACGATGGAGAAGGGGCGAGGGAAGAAGACCTTaGCTATCCCAGATACCAGGACGGTCCAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LGRWRRGEGRRP*LSQIPGRSRLL
Trigger: CAGCAACCTGGACCGTCCTGGTATCTGGGATAGCAAAGGTCTTCTTCCCTCGCCCCTTCTCCATCGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341919.7
ENST00000589537.1
CDS CAA 90 bp ATCCCAGATACCAGGACTGTGCCTGATAAATGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGGAACGGTTTGCAGGGGACGTGTCGG +
Preference number: 6 (lower is better)
Translates to: IPDTRTVPDKCPQDP*VLIPQRNGLQGTCR
Trigger: CCGACACGTCCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCATTTATCAGGCACAGTCCTGGTATCTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS GCA 72 bp GGTATCTTATGGAAACAAGGGCTGCACCCTGAAACCTaGGTTCGATGGAGTTCCAGCCCCAGCACAACCTGG +
Preference number: 6 (lower is better)
Translates to: GILWKQGLHPET*VRWSSSPSTTW
Trigger: CCAGGTTGTGCTGGGGCTGGAACTCCATCGAACGCAGGTTTCAGGGTGCAGCCCTTGTTTCCATAAGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS CAA 72 bp ACCAGGACTGTGCCTGATAAATGCCCGCAGGATCCCTaGGTCCTAATCCCACAAAGGAACGGTTTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: TRTVPDKCPQDP*VLIPQRNGLQG
Trigger: CCCCTGCAAACCGTTCCTTTGTGGGATTAGGACCAAGGGATCCTGCGGGCATTTATCAGGCACAGTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395111.7
ENST00000443272.3
ENST00000589123.5
ENST00000590282.5
ENST00000641145.1
CDS CAA 72 bp CATCCACCACATTTTAGCCGTCGTGTCGTAGCACAGTaGCCATTTGACCGAGGTCTCTCCCGGCTTGCTGGA +
Preference number: 6 (lower is better)
Translates to: HPPHFSRRVVAQ*PFDRGLSRLAG
Trigger: TCCAGCAAGCCGGGAGAGACCTCGGTCAAATGGCAACTGTGCTACGACACGACGGCTAAAATGTGGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641145.1
CDS GCA 72 bp TTGTCTGATTTTGGGGTATCTTATGGAAACAAGGGCTaGACCCTGAAACCTGCGTTCGATGGAGTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: LSDFGVSYGNKG*TLKPAFDGVPA
Trigger: GGCTGGAACTCCATCGAACGCAGGTTTCAGGGTGCAGCCCTTGTTTCCATAAGATACCCCAAAATCAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588839.1
CDS TCA 72 bp TTGATGATAGCATTTTGTCAAACTCCAGGAGTTAAATaGACATTACCCCTCCTCTGCCCGCAGCCCTCCATA +
Preference number: 6 (lower is better)
Translates to: LMIAFCQTPGVK*TLPLLCPQPSI
Trigger: TATGGAGGGCTGCGGGCAGAGGAGGGGTAATGTTCATTTAACTCCTGGAGTTTGACAAAATGCTATCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588839.1