Pregenerated sensors for NFE4 (Homo sapiens)
Ensembl gene IDs: ENSG00000230257Ensembl transcript IDs: ENST00000420058.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTAGGTGTCTTCTGGCCGGCTCTCTTCCTGCTTCTGCTATCTTGCTaGCTCACACTGCTGGCACAAGTGGCCTTGCGCCTTGGGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: VGVFWPALFLLLLSC*LTLLAQVALRLGTG Trigger: CCCAGTCCCAAGGCGCAAGGCCACTTGTGCCAGCAGTGTGAGTCAGCAAGATAGCAGAAGCAGGAAGAGAGCCGGCCAGAAGACACCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS TCA 90 bp | GTGGCCTTGCGCCTTGGGACTGGGCCAGTAGGTGAGATCAGTGACTaGTGTGCATGCACAGAGAAGCAACTGGAGGCTGAGGAGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VALRLGTGPVGEISD*CACTEKQLEAEELP Trigger: AGGAAGCTCCTCAGCCTCCAGTTGCTTCTCTGTGCATGCACATCAGTCACTGATCTCACCTACTGGCCCAGTCCCAAGGCGCAAGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CCA 90 bp | ACTCTGTCATTGTTTCTCTGTTCTTCTCATTCCATCTTCACTCCCTaGATGGCCTCTTTCTCAATCTTCAGGGGTACGTGTCTCCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TLSLFLCSSHSIFTP*MASFSIFRGTCLPV Trigger: GACTGGGAGACACGTACCCCTGAAGATTGAGAAAGAGGCCATCCAGGGAGTGAAGATGGAATGAGAAGAACAGAGAAACAATGACAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS TCA 90 bp | ACTCTACACCAGTTTTGGTTCTGCATGATGAAGGAGTTCTTTGCCTaGGCAGTAGGGAGTAGAGAATGCTCTGTGCTGAGACTCCTAAGT | + |
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Preference number: 5 (lower is better) Translates to: TLHQFWFCMMKEFFA*AVGSRECSVLRLLS Trigger: ACTTAGGAGTCTCAGCACAGAGCATTCTCTACTCCCTACTGCTCAGGCAAAGAACTCCTTCATCATGCAGAACCAAAACTGGTGTAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CCA 90 bp | ATACTCAGCAGTGTCTGCAATAGCTTCTTCAGCATTAATTCTCTCTaGAAACTCATCCTCAGTGACAGTACTCCCACTTGGTTTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: ILSSVCNSFFSINSL*KLILSDSTPTWFSV Trigger: AACAGAAAACCAAGTGGGAGTACTGTCACTGAGGATGAGTTTCCAGAGAGAATTAATGCTGAAGAAGCTATTGCAGACACTGCTGAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CAA 90 bp | CAGAGTAGGTGTCTTCTGGCCGGCTCTCTTCCTGCTTCTGCTATCTaGCTGACTCACACTGCTGGCACAAGTGGCCTTGCGCCTTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: QSRCLLAGSLPASAI*LTHTAGTSGLAPWD Trigger: GTCCCAAGGCGCAAGGCCACTTGTGCCAGCAGTGTGAGTCAGCAAGATAGCAGAAGCAGGAAGAGAGCCGGCCAGAAGACACCTACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS GCA 72 bp | CTCTCTTCCTGCTTCTGCTATCTTGCTGACTCACACTaGTGGCACAAGTGGCCTTGCGCCTTGGGACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSSCFCYLADSH*WHKWPCALGLG Trigger: GCCCAGTCCCAAGGCGCAAGGCCACTTGTGCCAGCAGTGTGAGTCAGCAAGATAGCAGAAGCAGGAAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CCA 72 bp | TCTTCCTGCTTCTGCTATCTTGCTGACTCACACTGCTaGCACAAGTGGCCTTGCGCCTTGGGACTGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSCFCYLADSHC*HKWPCALGLGQ Trigger: CTGGCCCAGTCCCAAGGCGCAAGGCCACTTGTGCCAGCAGTGTGAGTCAGCAAGATAGCAGAAGCAGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS TCA 72 bp | CGCCTTGGGACTGGGCCAGTAGGTGAGATCAGTGACTaGTGTGCATGCACAGAGAAGCAACTGGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RLGTGPVGEISD*CACTEKQLEAE Trigger: CTCAGCCTCCAGTTGCTTCTCTGTGCATGCACATCAGTCACTGATCTCACCTACTGGCCCAGTCCCAAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS TCA 72 bp | TTCTGGCCGGCTCTCTTCCTGCTTCTGCTATCTTGCTaGCTCACACTGCTGGCACAAGTGGCCTTGCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FWPALFLLLLSC*LTLLAQVALRL Trigger: AAGGCGCAAGGCCACTTGTGCCAGCAGTGTGAGTCAGCAAGATAGCAGAAGCAGGAAGAGAGCCGGCCAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CCA 72 bp | AGATCAGTGACTGATGTGCATGCACAGAGAAGCAACTaGAGGCTGAGGAGCTTCCTTTGTCCGGCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RSVTDVHAQRSN*RLRSFLCPAAV Trigger: CACAGCAGCCGGACAAAGGAAGCTCCTCAGCCTCCAGTTGCTTCTCTGTGCATGCACATCAGTCACTGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CAA 90 bp | GAAGACCGGAGCCCCTCCCGGGTTTCGGCACCAGATGAAAGATTCTaGTATCCGTTCAAACTCTTGAGAGTGTGCCAACAGACAACACGA | + |
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Preference number: 6 (lower is better) Translates to: EDRSPSRVSAPDERF*YPFKLLRVCQQTTR Trigger: TCGTGTTGTCTGTTGGCACACTCTCAAGAGTTTGAACGGATACAAGAATCTTTCATCTGGTGCCGAAACCCGGGAGGGGCTCCGGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CAA 90 bp | CACAGTCAGATCAGAATCAGTGGGATAAGCAGCCTAGGGTGTCCCTaGAGCACCCAGGTTCAAGTTAATCCTTTTACATGGAAAGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: HSQIRISGISSLGCP*STQVQVNPFTWKAL Trigger: AAGCGCTTTCCATGTAAAAGGATTAACTTGAACCTGGGTGCTCAAGGGACACCCTAGGCTGCTTATCCCACTGATTCTGATCTGACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CAA 72 bp | GCACCAGATGAAAGATTCTTGTATCCGTTCAAACTCTaGAGAGTGTGCCAACAGACAACACGAGGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: APDERFLYPFKL*RVCQQTTRGSV Trigger: CACACTGCCTCGTGTTGTCTGTTGGCACACTCTCAAGAGTTTGAACGGATACAAGAATCTTTCATCTGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CAA 72 bp | ATCAGAATCAGTGGGATAAGCAGCCTAGGGTGTCCCTaGAGCACCCAGGTTCAAGTTAATCCTTTTACATGG | + |
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Preference number: 6 (lower is better) Translates to: IRISGISSLGCP*STQVQVNPFTW Trigger: CCATGTAAAAGGATTAACTTGAACCTGGGTGCTCAAGGGACACCCTAGGCTGCTTATCCCACTGATTCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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| CDS CCA 72 bp | AGTGTCTGCAATAGCTTCTTCAGCATTAATTCTCTCTaGAAACTCATCCTCAGTGACAGTACTCCCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SVCNSFFSINSL*KLILSDSTPTW Trigger: CCAAGTGGGAGTACTGTCACTGAGGATGAGTTTCCAGAGAGAATTAATGCTGAAGAAGCTATTGCAGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420058.1 |
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