Pregenerated sensors for NFE2L1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263412Ensembl transcript IDs: ENST00000578660.1, ENST00000584428.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCACAGCTGGGGTGGCTTCTCCAGGTTCGCACCGAGGGGAAGTTaGGGTACCGGTTTCCGCCGCCAGCACCCAAGATGGCGGCACGAG | + |
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Preference number: 5 (lower is better) Translates to: PHSWGGFSRFAPRGS*GTGFRRQHPRWRHE Trigger: CTCGTGCCGCCATCTTGGGTGCTGGCGGCGGAAACCGGTACCCCAACTTCCCCTCGGTGCGAACCTGGAGAAGCCACCCCAGCTGTGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS TCA 90 bp | CCGCCAACGTTCCGCCAACGTTCCGCCAACGTCCCACCACCCTCATaGTATCCGTCCGCGGTACTGCTCCAGCGAAGGTACCCTTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PPTFRQRSANVPPPS*YPSAVLLQRRYPCL Trigger: CAGGCAAGGGTACCTTCGCTGGAGCAGTACCGCGGACGGATATCATGAGGGTGGTGGGACGTTGGCGGAACGTTGGCGGAACGTTGGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS GCA 90 bp | GTTCCGCCAACGTCCCACCACCCTCATGATATCCGTCCGCGGTACTaGTCCAGCGAAGGTACCCTTGCCTGGGCCATGAGGCGCAACCGT | + |
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Preference number: 5 (lower is better) Translates to: VPPTSHHPHDIRPRY*SSEGTLAWAMRRNR Trigger: ACGGTTGCGCCTCATGGCCCAGGCAAGGGTACCTTCGCTGGAGCAGTACCGCGGACGGATATCATGAGGGTGGTGGGACGTTGGCGGAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 90 bp | CCGAGGGGAAGTTGGGGTACCGGTTTCCGCCGCCAGCACCCAAGATaGCGGCACGAGCGTCGCAACCACAAGAACCACATGCTTCGTGTC | + |
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Preference number: 5 (lower is better) Translates to: PRGSWGTGFRRQHPR*RHERRNHKNHMLRV Trigger: GACACGAAGCATGTGGTTCTTGTGGTTGCGACGCTCGTGCCGCCATCTTGGGTGCTGGCGGCGGAAACCGGTACCCCAACTTCCCCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 90 bp | CATGATATCCGTCCGCGGTACTGCTCCAGCGAAGGTACCCTTGCCTaGGCCATGAGGCGCAACCGTCCCTCACAGCTGGGGTGGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HDIRPRYCSSEGTLA*AMRRNRPSQLGWLL Trigger: GAGAAGCCACCCCAGCTGTGAGGGACGGTTGCGCCTCATGGCCCAGGCAAGGGTACCTTCGCTGGAGCAGTACCGCGGACGGATATCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 90 bp | AGGCCTTCATTCCCCCGCCACAGAAAGCGCTGGAAGCGCCCAACCTaGATACTTCACCCAACGCCCAAGCCCACTAACATCGCCCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: RPSFPRHRKRWKRPT*ILHPTPKPTNIARR Trigger: GCGGCGGGCGATGTTAGTGGGCTTGGGCGTTGGGTGAAGTATCCAGGTTGGGCGCTTCCAGCGCTTTCTGTGGCGGGGGAATGAAGGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000584428.1 |
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| CDS TCA 90 bp | GCGAGGGTGTTCCGCACTCTGGCGGCGATACACCTTCCTATTCCCTaGCCTAGGCCTTCATTCCCCCGCCACAGAAAGCGCTGGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: ARVFRTLAAIHLPIP*PRPSFPRHRKRWKR Trigger: GCGCTTCCAGCGCTTTCTGTGGCGGGGGAATGAAGGCCTAGGTCAGGGAATAGGAAGGTGTATCGCCGCCAGAGTGCGGAACACCCTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 90 bp | CTCCTGCCCAGCCTGGAGTCGCAGGGGCAAGGCCTAGTTTTACAATaGCTGCCAGCCTTTCCCTTAGGGAGCCACATGCATGCGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: LLPSLESQGQGLVLQ*LPAFPLGSHMHALT Trigger: AGTGAGCGCATGCATGTGGCTCCCTAAGGGAAAGGCTGGCAGCCATTGTAAAACTAGGCCTTGCCCCTGCGACTCCAGGCTGGGCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 90 bp | CCGCCTCAGCATTCTCGGGTCTCACTAGACTTTTGCAAGTCACTGTaGGAACCCTCAAGGCGAGGGTGTTCCGCACTCTGGCGGCGATAC | + |
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Preference number: 5 (lower is better) Translates to: PPQHSRVSLDFCKSL*EPSRRGCSALWRRY Trigger: GTATCGCCGCCAGAGTGCGGAACACCCTCGCCTTGAGGGTTCCCACAGTGACTTGCAAAAGTCTAGTGAGACCCGAGAATGCTGAGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 90 bp | TGCAAGTCACTGTGGGAACCCTCAAGGCGAGGGTGTTCCGCACTCTaGCGGCGATACACCTTCCTATTCCCTGACCTAGGCCTTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: CKSLWEPSRRGCSAL*RRYTFLFPDLGLHS Trigger: GGAATGAAGGCCTAGGTCAGGGAATAGGAAGGTGTATCGCCGCCAGAGTGCGGAACACCCTCGCCTTGAGGGTTCCCACAGTGACTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 90 bp | ATTCCTGGCATGTGTCATCCTCCAGGGATGACTGCAGGATGGATGTaGCTGTTGGCGGCAGCAGCAGCTTTTCCTACCAGGGAAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: IPGMCHPPGMTAGWM*LLAAAAAFPTREAG Trigger: CCCAGCTTCCCTGGTAGGAAAAGCTGCTGCTGCCGCCAACAGCCACATCCATCCTGCAGTCATCCCTGGAGGATGACACATGCCAGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS GCA 90 bp | ATGCTTCGTGTCCCGCCTCAGCATTCTCGGGTCTCACTAGACTTTTaGAAGTCACTGTGGGAACCCTCAAGGCGAGGGTGTTCCGCACTC | + |
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Preference number: 5 (lower is better) Translates to: MLRVPPQHSRVSLDF*KSLWEPSRRGCSAL Trigger: GAGTGCGGAACACCCTCGCCTTGAGGGTTCCCACAGTGACTTGCAAAAGTCTAGTGAGACCCGAGAATGCTGAGGCGGGACACGAAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS GCA 90 bp | CCCTTCTCTGAGGATTCCTGGCATGTGTCATCCTCCAGGGATGACTaGAGGATGGATGTGGCTGTTGGCGGCAGCAGCAGCTTTTCCTAC | + |
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Preference number: 5 (lower is better) Translates to: PFSEDSWHVSSSRDD*RMDVAVGGSSSFSY Trigger: GTAGGAAAAGCTGCTGCTGCCGCCAACAGCCACATCCATCCTGCAGTCATCCCTGGAGGATGACACATGCCAGGAATCCTCAGAGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 90 bp | CTGAGGATTCCTGGCATGTGTCATCCTCCAGGGATGACTGCAGGATaGATGTGGCTGTTGGCGGCAGCAGCAGCTTTTCCTACCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LRIPGMCHPPGMTAG*MWLLAAAAAFPTRE Trigger: TTCCCTGGTAGGAAAAGCTGCTGCTGCCGCCAACAGCCACATCCATCCTGCAGTCATCCCTGGAGGATGACACATGCCAGGAATCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 90 bp | TCTAGACAGAATGGAAGACAGTCTTTCTGTCTCCACTCCCTTCCATaGAGCATCAAATATCCTGGGCGCCCACACCCTGCCAGGCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: SRQNGRQSFCLHSLP*SIKYPGRPHPARPR Trigger: CCTAGGCCTGGCAGGGTGTGGGCGCCCAGGATATTTGATGCTCCATGGAAGGGAGTGGAGACAGAAAGACTGTCTTCCATTCTGTCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 90 bp | ACCGGGACTGATGACACATCAGCATGGGATCCTTCTTTTGCTTCTTaGGTAACTGTCCTATTAACAGCTGTCCCAGGCAAAGGGAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: TGTDDTSAWDPSFAS*VTVLLTAVPGKGRG Trigger: CCCCCTCCCTTTGCCTGGGACAGCTGTTAATAGGACAGTTACCCAAGAAGCAAAAGAAGGATCCCATGCTGATGTGTCATCAGTCCCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS TCA 90 bp | CTTTGTCCTATAGCTGGGAGGAACGCATTGCAAACGCCAACCCAATaGTTCCCTAAATGGGGTCTTCGCATCAGCTGCGTTAAAATCACC | + |
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Preference number: 5 (lower is better) Translates to: LCPIAGRNALQTPTQ*FPKWGLRISCVKIT Trigger: GGTGATTTTAACGCAGCTGATGCGAAGACCCCATTTAGGGAATCATTGGGTTGGCGTTTGCAATGCGTTCCTCCCAGCTATAGGACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS TCA 90 bp | GGAGCCACATGCATGCGCTCACTTTTTCCAGTGGTCTTCTCAGTCTaGTTTAATGGATATACCGGGACTGATGACACATCAGCATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GATCMRSLFPVVFSV*FNGYTGTDDTSAWD Trigger: ATCCCATGCTGATGTGTCATCAGTCCCGGTATATCCATTAAATCAGACTGAGAAGACCACTGGAAAAAGTGAGCGCATGCATGTGGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 90 bp | AGCCTTTCCCTTAGGGAGCCACATGCATGCGCTCACTTTTTCCAGTaGTCTTCTCAGTCTGATTTAATGGATATACCGGGACTGATGACA | + |
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Preference number: 5 (lower is better) Translates to: SLSLREPHACAHFFQ*SSQSDLMDIPGLMT Trigger: TGTCATCAGTCCCGGTATATCCATTAAATCAGACTGAGAAGACCACTGGAAAAAGTGAGCGCATGCATGTGGCTCCCTAAGGGAAAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS TCA 90 bp | ATACAATACCAGTCTTTATCTTCATTGTCTCACTACTTCGGGGACTaGATGGTCTCCTATTTTATTGTTAACATGCCATATCCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: IQYQSLSSLSHYFGD*MVSYFIVNMPYPSK Trigger: TTTTGAAGGATATGGCATGTTAACAATAAAATAGGAGACCATTCAGTCCCCGAAGTAGTGAGACAATGAAGATAAAGACTGGTATTGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | CGTCCGCGGTACTGCTCCAGCGAAGGTACCCTTGCCTaGGCCATGAGGCGCAACCGTCCCTCACAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RPRYCSSEGTLA*AMRRNRPSQLG Trigger: CCCCAGCTGTGAGGGACGGTTGCGCCTCATGGCCCAGGCAAGGGTACCTTCGCTGGAGCAGTACCGCGGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 72 bp | TGGGCCATGAGGCGCAACCGTCCCTCACAGCTGGGGTaGCTTCTCCAGGTTCGCACCGAGGGGAAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: WAMRRNRPSQLG*LLQVRTEGKLG Trigger: CCCCAACTTCCCCTCGGTGCGAACCTGGAGAAGCCACCCCAGCTGTGAGGGACGGTTGCGCCTCATGGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 72 bp | TGGGGTGGCTTCTCCAGGTTCGCACCGAGGGGAAGTTaGGGTACCGGTTTCCGCCGCCAGCACCCAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: WGGFSRFAPRGS*GTGFRRQHPRW Trigger: CCATCTTGGGTGCTGGCGGCGGAAACCGGTACCCCAACTTCCCCTCGGTGCGAACCTGGAGAAGCCACCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS GCA 72 bp | TATCCGTCCGCGGTACTGCTCCAGCGAAGGTACCCTTaGCTGGGCCATGAGGCGCAACCGTCCCTCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: YPSAVLLQRRYP*LGHEAQPSLTA Trigger: AGCTGTGAGGGACGGTTGCGCCTCATGGCCCAGGCAAGGGTACCTTCGCTGGAGCAGTACCGCGGACGGATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS GCA 72 bp | ACGTCCCACCACCCTCATGATATCCGTCCGCGGTACTaGTCCAGCGAAGGTACCCTTGCCTGGGCCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: TSHHPHDIRPRY*SSEGTLAWAMR Trigger: CCTCATGGCCCAGGCAAGGGTACCTTCGCTGGAGCAGTACCGCGGACGGATATCATGAGGGTGGTGGGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 72 bp | AGTTGGGGTACCGGTTTCCGCCGCCAGCACCCAAGATaGCGGCACGAGCGTCGCAACCACAAGAACCACATG | + |
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Preference number: 6 (lower is better) Translates to: SWGTGFRRQHPR*RHERRNHKNHM Trigger: CATGTGGTTCTTGTGGTTGCGACGCTCGTGCCGCCATCTTGGGTGCTGGCGGCGGAAACCGGTACCCCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS TCA 72 bp | TTCCGCCAACGTTCCGCCAACGTCCCACCACCCTCATaGTATCCGTCCGCGGTACTGCTCCAGCGAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: FRQRSANVPPPS*YPSAVLLQRRY Trigger: GTACCTTCGCTGGAGCAGTACCGCGGACGGATATCATGAGGGTGGTGGGACGTTGGCGGAACGTTGGCGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS GCA 72 bp | GATGGCGGCACGAGCGTCGCAACCACAAGAACCACATaGTTCGTGTCCCGCCTCAGCATTCTCGGGTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: DGGTSVATTRTT*FVSRLSILGSH Trigger: GTGAGACCCGAGAATGCTGAGGCGGGACACGAAGCATGTGGTTCTTGTGGTTGCGACGCTCGTGCCGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CCA 72 bp | CTGTGGGAACCCTCAAGGCGAGGGTGTTCCGCACTCTaGCGGCGATACACCTTCCTATTCCCTGACCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWEPSRRGCSAL*RRYTFLFPDLG Trigger: GCCTAGGTCAGGGAATAGGAAGGTGTATCGCCGCCAGAGTGCGGAACACCCTCGCCTTGAGGGTTCCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS TCA 72 bp | TTCCGCACTCTGGCGGCGATACACCTTCCTATTCCCTaGCCTAGGCCTTCATTCCCCCGCCACAGAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: FRTLAAIHLPIP*PRPSFPRHRKR Trigger: GCGCTTTCTGTGGCGGGGGAATGAAGGCCTAGGTCAGGGAATAGGAAGGTGTATCGCCGCCAGAGTGCGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS GCA 72 bp | GAGGATTCCTGGCATGTGTCATCCTCCAGGGATGACTaGAGGATGGATGTGGCTGTTGGCGGCAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EDSWHVSSSRDD*RMDVAVGGSSS Trigger: GCTGCTGCTGCCGCCAACAGCCACATCCATCCTGCAGTCATCCCTGGAGGATGACACATGCCAGGAATCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | TTCCCCCGCCACAGAAAGCGCTGGAAGCGCCCAACCTaGATACTTCACCCAACGCCCAAGCCCACTAACATC | + |
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Preference number: 6 (lower is better) Translates to: FPRHRKRWKRPT*ILHPTPKPTNI Trigger: GATGTTAGTGGGCTTGGGCGTTGGGTGAAGTATCCAGGTTGGGCGCTTCCAGCGCTTTCTGTGGCGGGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000584428.1 |
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| CDS CAA 90 bp | GGCGCCCACACCCTGCCAGGCCTAGGCCTGCTGTTGCGACTGAGTTaGTCTCTACACCTTTACTCTCTTCGGCCCTTGCAACTCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GAHTLPGLGLLLRLS*SLHLYSLRPLQLFP Trigger: GGGAAAGAGTTGCAAGGGCCGAAGAGAGTAAAGGTGTAGAGACAAACTCAGTCGCAACAGCAGGCCTAGGCCTGGCAGGGTGTGGGCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | GTTGGCGGCAGCAGCAGCTTTTCCTACCAGGGAAGCTaGGTCGGTAGACACTACACTGCTATTCCTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VGGSSSFSYQGS*VGRHYTAIPGV Trigger: CACCCCAGGAATAGCAGTGTAGTGTCTACCGACCCAGCTTCCCTGGTAGGAAAAGCTGCTGCTGCCGCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 72 bp | CTGGGCGCCCACACCCTGCCAGGCCTAGGCCTGCTGTaGCGACTGAGTTTGTCTCTACACCTTTACTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGAHTLPGLGLL*RLSLSLHLYSL Trigger: AAGAGAGTAAAGGTGTAGAGACAAACTCAGTCGCAACAGCAGGCCTAGGCCTGGCAGGGTGTGGGCGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 90 bp | CATGCTTCGTGTCCCGCCTCAGCATTCTCGGGTCTCACTAGACTTTaGCAAGTCACTGTGGGAACCCTCAAGGCGAGGGTGTTCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: HASCPASAFSGLTRL*QVTVGTLKARVFRT Trigger: AGTGCGGAACACCCTCGCCTTGAGGGTTCCCACAGTGACTTGCAAAAGTCTAGTGAGACCCGAGAATGCTGAGGCGGGACACGAAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000578660.1 ENST00000584428.1 |
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| CDS CAA 90 bp | TCAAATATCCTGGGCGCCCACACCCTGCCAGGCCTAGGCCTGCTGTaGCGACTGAGTTTGTCTCTACACCTTTACTCTCTTCGGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SNILGAHTLPGLGLL*RLSLSLHLYSLRPL Trigger: CAAGGGCCGAAGAGAGTAAAGGTGTAGAGACAAACTCAGTCGCAACAGCAGGCCTAGGCCTGGCAGGGTGTGGGCGCCCAGGATATTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | AGCCTGGAGTCGCAGGGGCAAGGCCTAGTTTTACAATaGCTGCCAGCCTTTCCCTTAGGGAGCCACATGCAT | + |
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Preference number: 6 (lower is better) Translates to: SLESQGQGLVLQ*LPAFPLGSHMH Trigger: ATGCATGTGGCTCCCTAAGGGAAAGGCTGGCAGCCATTGTAAAACTAGGCCTTGCCCCTGCGACTCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | ATGTGTCATCCTCCAGGGATGACTGCAGGATGGATGTaGCTGTTGGCGGCAGCAGCAGCTTTTCCTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: MCHPPGMTAGWM*LLAAAAAFPTR Trigger: CCTGGTAGGAAAAGCTGCTGCTGCCGCCAACAGCCACATCCATCCTGCAGTCATCCCTGGAGGATGACACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 72 bp | ACCCTGCCAGGCCTAGGCCTGCTGTTGCGACTGAGTTaGTCTCTACACCTTTACTCTCTTCGGCCCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: TLPGLGLLLRLS*SLHLYSLRPLQ Trigger: TTGCAAGGGCCGAAGAGAGTAAAGGTGTAGAGACAAACTCAGTCGCAACAGCAGGCCTAGGCCTGGCAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | AATGGAAGACAGTCTTTCTGTCTCCACTCCCTTCCATaGAGCATCAAATATCCTGGGCGCCCACACCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: NGRQSFCLHSLP*SIKYPGRPHPA Trigger: GGCAGGGTGTGGGCGCCCAGGATATTTGATGCTCCATGGAAGGGAGTGGAGACAGAAAGACTGTCTTCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 90 bp | ATTGGGAGACACGCGTCAGTAGTCCCTGATAAATGGAAAGATCGCTaGAGTCCAGGAGTTCCAGTCCAGCCTCTCACACCGCCAACGTTC | + |
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Preference number: 6 (lower is better) Translates to: IGRHASVVPDKWKDR*SPGVPVQPLTPPTF Trigger: GAACGTTGGCGGTGTGAGAGGCTGGACTGGAACTCCTGGACTCAAGCGATCTTTCCATTTATCAGGGACTACTGACGCGTGTCTCCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584428.1 |
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| CDS TCA 72 bp | ATAGCTGGGAGGAACGCATTGCAAACGCCAACCCAATaGTTCCCTAAATGGGGTCTTCGCATCAGCTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: IAGRNALQTPTQ*FPKWGLRISCV Trigger: AACGCAGCTGATGCGAAGACCCCATTTAGGGAATCATTGGGTTGGCGTTTGCAATGCGTTCCTCCCAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 72 bp | CACGCGTCAGTAGTCCCTGATAAATGGAAAGATCGCTaGAGTCCAGGAGTTCCAGTCCAGCCTAGAATAGGT | + |
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Preference number: 6 (lower is better) Translates to: HASVVPDKWKDR*SPGVPVQPRIG Trigger: ACCTATTCTAGGCTGGACTGGAACTCCTGGACTCAAGCGATCTTTCCATTTATCAGGGACTACTGACGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 90 bp | ATTGGGAGACACGCGTCAGTAGTCCCTGATAAATGGAAAGATCGCTaGAGTCCAGGAGTTCCAGTCCAGCCTAGAATAGGTAAAACATGC | + |
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Preference number: 6 (lower is better) Translates to: IGRHASVVPDKWKDR*SPGVPVQPRIGKTC Trigger: GCATGTTTTACCTATTCTAGGCTGGACTGGAACTCCTGGACTCAAGCGATCTTTCCATTTATCAGGGACTACTGACGCGTGTCTCCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | GATGACACATCAGCATGGGATCCTTCTTTTGCTTCTTaGGTAACTGTCCTATTAACAGCTGTCCCAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: DDTSAWDPSFAS*VTVLLTAVPGK Trigger: TTTGCCTGGGACAGCTGTTAATAGGACAGTTACCCAAGAAGCAAAAGAAGGATCCCATGCTGATGTGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS TCA 72 bp | TGCATGCGCTCACTTTTTCCAGTGGTCTTCTCAGTCTaGTTTAATGGATATACCGGGACTGATGACACATCA | + |
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Preference number: 6 (lower is better) Translates to: CMRSLFPVVFSV*FNGYTGTDDTS Trigger: TGATGTGTCATCAGTCCCGGTATATCCATTAAATCAGACTGAGAAGACCACTGGAAAAAGTGAGCGCATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 72 bp | AATGGACTCGATTATTTACTGAGTTATCAGTTGGCCTaGTCCTTAGTTGTACAGGGACTAATGACTCACCTA | + |
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Preference number: 6 (lower is better) Translates to: NGLDYLLSYQLA*SLVVQGLMTHL Trigger: TAGGTGAGTCATTAGTCCCTGTACAACTAAGGACAAGGCCAACTGATAACTCAGTAAATAATCGAGTCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CAA 72 bp | GCACAAAATGGACTCGATTATTTACTGAGTTATCAGTaGGCCTTGTCCTTAGTTGTACAGGGACTAATGACT | + |
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Preference number: 6 (lower is better) Translates to: AQNGLDYLLSYQ*ALSLVVQGLMT Trigger: AGTCATTAGTCCCTGTACAACTAAGGACAAGGCCAACTGATAACTCAGTAAATAATCGAGTCCATTTTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS TCA 72 bp | CAGTCTTTATCTTCATTGTCTCACTACTTCGGGGACTaGATGGTCTCCTATTTTATTGTTAACATGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: QSLSSLSHYFGD*MVSYFIVNMPY Trigger: ATATGGCATGTTAACAATAAAATAGGAGACCATTCAGTCCCCGAAGTAGTGAGACAATGAAGATAAAGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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| CDS CCA 72 bp | CTTTATCTTCATTGTCTCACTACTTCGGGGACTGAATaGTCTCCTATTTTATTGTTAACATGCCATATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LYLHCLTTSGTE*SPILLLTCHIL Trigger: AAGGATATGGCATGTTAACAATAAAATAGGAGACCATTCAGTCCCCGAAGTAGTGAGACAATGAAGATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000578660.1 |
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