RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFE2L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000082641

Ensembl transcript IDs: ENST00000357480.9, ENST00000361665.7, ENST00000362042.8, ENST00000536222.5, ENST00000577411.5, ENST00000577431.1, ENST00000579481.1, ENST00000579537.5, ENST00000579889.1, ENST00000580037.1, ENST00000580050.1, ENST00000581319.1, ENST00000581441.1, ENST00000582155.5, ENST00000582574.1, ENST00000583060.1, ENST00000583210.5, ENST00000583378.5, ENST00000584137.5, ENST00000584634.5, ENST00000585062.1, ENST00000585291.5, ENST00000585299.1

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTaGTGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACG +
Preference number: 1 (lower is better)
Translates to: TQTPDQGRTAYTCRL*WRQWEPQLRGGWST
Trigger: CGTGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR GCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGACCCGCAGTCATCCCATCTGAGAAGA +
Preference number: 1 (lower is better)
Translates to: WPLPLHPSGAEPASA*LFLYTDPQSSHLRR
Trigger: TCTTCTCAGATGGGATGACTGCGGGTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
3UTR GCA 90 bp GGGGTTTATCACACCAGTGATCTAGGCCCACCAGTCACTCCAACCTaGTGCCTGGAATCCTGGCCAGAGCCAACCTTAACCTTCCCTCTG +
Preference number: 1 (lower is better)
Translates to: GVYHTSDLGPPVTPT*CLESWPEPTLTFPL
Trigger: CAGAGGGAAGGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCAGGTTGGAGTGACTGGTGGGCCTAGATCACTGGTGTGATAAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CCA 90 bp GGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTA +
Preference number: 1 (lower is better)
Translates to: GKAVNDMRDVGAVAT*DHVTLSCSLYPLTL
Trigger: TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR TCA 90 bp TCTAAATCTCAAAGCCAGTGTTGGGGCCCAGTGGCTCCATTCGATTaGAACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTC +
Preference number: 1 (lower is better)
Translates to: SKSQSQCWGPVAPFD*NMANDIQELPFRDV
Trigger: GACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAATCGAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGATTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CCA 90 bp CTCTACCCTTTGACTCTAAATCTCAAAGCCAGTGTTGGGGCCCAGTaGCTCCATTCGATTGAAACATGGCCAATGATATCCAAGAGCTCC +
Preference number: 1 (lower is better)
Translates to: LYPLTLNLKASVGAQ*LHSIETWPMISKSS
Trigger: GGAGCTCTTGGATATCATTGGCCATGTTTCAATCGAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGATTTAGAGTCAAAGGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCC +
Preference number: 2 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAGAVAT*DHVTLS
Trigger: GGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGCAGCTCAGGGGTGGCTaGAGCACGGAGGGAGATGGA +
Preference number: 2 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEQLRGG*STEGDG
Trigger: TCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTG...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGACCTCTTCCTGTACACTaGCCCGCAGTCATCCCATCT +
Preference number: 2 (lower is better)
Translates to: TGPGEDGIHMQALMETMGPLPVH*PAVIPS
Trigger: AGATGGGATGACTGCGGGTCAGTGTACAGGAAGAGG...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 2 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATCTCAAAGCCAGTGTTaGGGCCCAGTGGCTCCATTC +
Preference number: 2 (lower is better)
Translates to: TGPGEDGIHMQALMETMGSQSQC*GPVAPF
Trigger: GAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGAGGAAAGGGGTAGGGTaGGGACCCTGTCCGTCTAAA +
Preference number: 2 (lower is better)
Translates to: NTNTGPGEDGIHMQALMERKGVG*GPCPSK
Trigger: TTTAGACGGACAGGGTCCTCACCCTACCCCTTTCCT...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 2 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPLQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
3UTR-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCCCCTGTCCGTCTAAATaGTCTGGCCACTTCCACTCC +
Preference number: 2 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSPCPSK*SGHFHS
Trigger: GGAGTGGAAGTGGCCAGACCATTTAGACGGACAGGG...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 2 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATTGAAACATGGCCAATaGTATCCAAGAGCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGALKHGQ*YPRAPL
Trigger: AAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGTGGCTCCATTCGATTaGAACATGGCCAATGATATC +
Preference number: 2 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAVAPFD*NMANDI
Trigger: GATATCATTGGCCATGTTTCAATCGAATGGAGCCAC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR GCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 2 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTEPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 2 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTLQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGTGGCTCCATTCGATTaGAACATGGCCAATGATATC +
Preference number: 2 (lower is better)
Translates to: TGPGEDGIHMQALMETMGVAPFD*NMANDI
Trigger: GATATCATTGGCCATGTTTCAATCGAATGGAGCCAC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTGCTGCCTGGAATCCTaGCCAGAGCCAACCTTAACC +
Preference number: 2 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTCCLES*PEPTLT
Trigger: GGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CAA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTaGACTCTAAATCTCAAAGCCAGTGTTGGGGCCCAGTGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: VATWDHVTLSCSLYP*TLNLKASVGAQWLH
Trigger: ATGGAGCCACTGGGCCCCAACACTGGCTTTGAGATTTAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCCCTCCTTCCTGAAATaGGACTTTCTGCCACCTTCC +
Preference number: 2 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTPSFLK*DFLPPS
Trigger: GGAAGGTGGCAGAAAGTCTCATTTCAGGAAGGAGGG...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 2 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR GCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 2 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEEPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR GCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCCAGTCACTCCAACCTaGTGCCTGGAATCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEPVTPT*CLESWP
Trigger: TGGCCAGGATTCCAGGCAGCAGGTTGGAGTGACTGG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGACATTCGATTGAAACATaGCCAATGATATCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: TGPGEDGIHMQALMETMGHSIET*PMISKS
Trigger: GCTCTTGGATATCATTGGCCATGTTTCAATCGAATG...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTT +
Preference number: 2 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLQFRSW*ASNPLL
Trigger: AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 2 (lower is better)
Translates to: TWPMISKSSPSGMSKCKELQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR TCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTATCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR TCA 72 bp CCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTaGTGGAGACAATGGGAGCCTCAGCTCAGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: PDQGRTAYTCRL*WRQWEPQLRGG
Trigger: GCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CCA 72 bp GCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTaGCTGGAGCACGGAGGGAGATGGAGTGGCAAGGCA +
Preference number: 3 (lower is better)
Translates to: ALMETMGASAQG*LEHGGRWSGKA
Trigger: TGCCTTGCCACTCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR TCA 72 bp CCACCACCACCCCTGCCTCACAGGAAAGGGGTAGGGTaGGGACCCTGTCCGTCTAAATGGTCTGGCCACTTC +
Preference number: 3 (lower is better)
Translates to: PPPPLPHRKGVG*GPCPSKWSGHF
Trigger: GAAGTGGCCAGACCATTTAGACGGACAGGGTCCTCACCCTACCCCTTTCCTGTGAGGCAGGGGTGGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
3UTR-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAATGACATGCGTGATGTaGGGGCTGTTGCAACATGGG +
Preference number: 3 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAMTCVM*GLLQHG
Trigger: CCCATGTTGCAACAGCCCCAACATCACGCATGTCAT...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR GCA 72 bp CACACCAGTGATCTAGGCCCACCAGTCACTCCAACCTaGTGCCTGGAATCCTGGCCAGAGCCAACCTTAACC +
Preference number: 3 (lower is better)
Translates to: HTSDLGPPVTPT*CLESWPEPTLT
Trigger: GGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCAGGTTGGAGTGACTGGTGGGCCTAGATCACTGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CAA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCT +
Preference number: 3 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTSPVSV*VGFKPP
Trigger: AGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CAA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTATCTCAAAGCCAGTGTaGGGGCCCAGTGGCTCCATT +
Preference number: 3 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTISKPV*GPSGSI
Trigger: AATGGAGCCACTGGGCCCCAACACTGGCTTTGAGAT...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR TCA 72 bp CAAAGCCAGTGTTGGGGCCCAGTGGCTCCATTCGATTaGAACATGGCCAATGATATCCAAGAGCTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: QSQCWGPVAPFD*NMANDIQELPF
Trigger: GAAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAATCGAATGGAGCCACTGGGCCCCAACACTGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CCA 72 bp AGTGTTGGGGCCCAGTGGCTCCATTCGATTGAAACATaGCCAATGATATCCAAGAGCTCCCCTTCAGGGATG +
Preference number: 3 (lower is better)
Translates to: SVGAQWLHSIET*PMISKSSPSGM
Trigger: CATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAATCGAATGGAGCCACTGGGCCCCAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CCA 72 bp GTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCCTGTTCACTCTACCCT +
Preference number: 3 (lower is better)
Translates to: VNDMRDVGAVAT*DHVTLSCSLYP
Trigger: AGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR-3UTR CAA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCATGTTCACTCTACCCTTaGACTCTAAATCTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVACSLYP*TLNLKA
Trigger: GGCTTTGAGATTTAGAGTCAAAGGGTAGAGTGAACA...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR TCA 72 bp GGGCCCAGTGGCTCCATTCGATTGAAACATGGCCAATaGTATCCAAGAGCTCCCCTTCAGGGATGTCAAAAT +
Preference number: 3 (lower is better)
Translates to: GPSGSIRLKHGQ*YPRAPLQGCQN
Trigger: ATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAATCGAATGGAGCCACTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR GCA 72 bp ATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATaGAAGGAGCAGAAAGAGTTAACACCGTCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: MISKSSPSGMSK*KEQKELTPSLP
Trigger: GGGGAGGGACGGTGTTAACTCTTTCTGCTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CCA 72 bp TTGACTCTAAATCTCAAAGCCAGTGTTGGGGCCCAGTaGCTCCATTCGATTGAAACATGGCCAATGATATCC +
Preference number: 3 (lower is better)
Translates to: LTLNLKASVGAQ*LHSIETWPMIS
Trigger: GGATATCATTGGCCATGTTTCAATCGAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGATTTAGAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCCTGCCGCCGGGCCTaGTGGTCGGCCATCGTGCGG +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASSCRRA*WSAIVR
Trigger: CCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCCAGGGCCCTCACCTaGCTGAGGAGCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWASRALT*LRSRRA
Trigger: TGCCCGGCGGCTCCTCAGTCAGGTGAGGGCCCTGGA...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASWWQVG*VQGTGC
Trigger: GCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFWWQVG*VQGTGC
Trigger: GCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTTCCGCGCCCTCGCCTaGCCAGGTGTCCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSFRALA*PGVLLA
Trigger: GGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGGAA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATCCTGCCGCCGGGCCTaGTGGTCGGCCATCGTGCGG +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASSCRRA*WSAIVR
Trigger: CCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTCCAGGGCCCTCACCTaGCTGAGGAGCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPSRALT*LRSRRA
Trigger: TGCCCGGCGGCTCCTCAGTCAGGTGAGGGCCCTGGA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCCATCGTGCGGGGGATaGGGAGGACACTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSPSCGG*GGHCRP
Trigger: GGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTCCATCGTGCGGGGGATaGGGAGGACACTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAPSCGG*GGHCRP
Trigger: GGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGG...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTCCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCCGCGCCCTCGCCTaGCCAGGTGTCCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPFRALA*PGVLLA
Trigger: GGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGGAA...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTCCTGCCGCCGGGCCTaGTGGTCGGCCATCGTGCGG +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVSCRRA*WSAIVR
Trigger: CCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCAACTGGGCCCCAGGATaGTCTCCCGGAGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFNWAPG*SPGVGE
Trigger: TTCCCCCACTCCGGGAGATCATCCTGGGGCCCAGTT...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCAGGCCTGAGTTGGGCTaGCTGCCAGAGACAGACCCC +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFRPELG*LPETDP
Trigger: GGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCT...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPWWQVG*VQGTGC
Trigger: GCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCCCATCGTGCGGGGGATaGGGAGGACACTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFPSCGG*GGHCRP
Trigger: GGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGG...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCCGCAGAGGCTGCAGTaGGATGGGACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSPQRLQ*DGTPTP
Trigger: TGGGGTGGGAGTCCCATCTCACTGCAGCCTCTGCGG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582155.5
ENST00000583378.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTTCCGCGCCCTCGCCTaGCCAGGTGTCCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNFRALA*PGVLLA
Trigger: GGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGGAA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCTCCTGCCGCCGGGCCTaGTGGTCGGCCATCGTGCGG +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFSCRRA*WSAIVR
Trigger: CCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGA...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGTCCAGGGCCCTCACCTaGCTGAGGAGCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMESRALT*LRSRRA
Trigger: TGCCCGGCGGCTCCTCAGTCAGGTGAGGGCCCTGGA...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVWWQVG*VQGTGC
Trigger: GCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTCCATCGTGCGGGGGATaGGGAGGACACTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVPSCGG*GGHCRP
Trigger: GGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGG...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTCAAGGCCACTGCTCTaGCGCTCCAGCCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFSRPLL*RSSQQV
Trigger: AACCTGCTGGCTGGAGCGGCAGAGCAGTGGCCTTGA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASFGFLS*RRACWS
Trigger: CGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPFGFLS*RRACWS
Trigger: CGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTGGGCGAGGCCTGAGTTaGGCTGACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAGRGLS*ADCQRQ
Trigger: CTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCC...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTGGGCGAGGCCTGAGTTaGGCTGACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSGRGLS*ADCQRQ
Trigger: CTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCC...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGGGACAGGGCCGTCTaGTCCTCCCCACTAGGCACC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFRDRAV*SSPLGT
Trigger: GGTGCCTAGTGGGGAGGACCAGACGGCCCTGTCCCT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCCTTTCTCCGGTCCTTTaGCTTCCTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFLSPVL*LPLLPP
Trigger: CGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAG...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGCCTCAGCTCAGGGGTaGCTGGAGCACGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPASAQG*LEHGGR
Trigger: TCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAAACCCGAGTCCGGCTaGGACCAAGTCGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPKPESG*DQVAMP
Trigger: GGGCATGGCGACTTGGTCTCAGCCGGACTCGGGTTT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361665.7
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCAACTGGGCCCCAGGATaGTCTCCCGGAGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPNWAPG*SPGVGE
Trigger: TTCCCCCACTCCGGGAGATCATCCTGGGGCCCAGTT...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAAGGCCTGAGTTGGGCTaGCTGCCAGAGACAGACCCC +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGARPELG*LPETDP
Trigger: GGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCT...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCTCGAGGGCGAGGCCTaGGTTGGGCTGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPLEGEA*VGLTAR
Trigger: TCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTCTCGAGGGCGAGGCCTaGGTTGGGCTGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVLEGEA*VGLTAR
Trigger: TCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAG...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEWWQVG*VQGTGC
Trigger: GCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCA...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPAGCLG*GSAGLH
Trigger: GTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGC...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCATCGTGCGGGGGATaGGGAGGACACTGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFPSCGG*GGHCRP
Trigger: GGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGCCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCCTGAGTTGGGCTGACTaGCAGAGACAGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFLSWAD*QRQTPL
Trigger: CAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAG...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCGCCATCTTGTTCTTaGCCCGGCGCCGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPPPSCS*PGAGCL
Trigger: GAGACATCCGGCGCCGGGGCAAGAACAAGATGGCGG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSRALSR*RSSTSR
Trigger: GCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGFGFLS*RRACWS
Trigger: CGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVFGFLS*RRACWS
Trigger: CGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTCCAGTCACTCCAACCTaGTGCCTGGAATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASPVTPT*CLESWP
Trigger: TGGCCAGGATTCCAGGCAGCAGGTTGGAGTGACTGG...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGGGCGAGGCCTGAGTTaGGCTGACTGCCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAGRGLS*ADCQRQ
Trigger: CTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCATCTTGGAGGCCACTaGAACTCTCGAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSHLGGH*NSRGRG
Trigger: GCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTGGGCCTGTCACATCTTaGAGGCCACTGGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASGPVTS*RPLELS
Trigger: CGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCC...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAAGGGACAGGGCCGTCTaGTCCTCCCCACTAGGCACC +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGRDRAV*SSPLGT
Trigger: GGTGCCTAGTGGGGAGGACCAGACGGCCCTGTCCCT...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCACCAACGGGAGCAGCGTaGAGCTACTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASPTGAA*SYWPQA
Trigger: TGCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGG...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTAGGGTCAGGCAGCTCTaGGCCTGCTGTGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSRVRQL*ACCVIG
Trigger: GCCAATGACACAGCAGGCCCAGAGCTGCCTGACCCT...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTCGCCCAAACACCTCCTaGTACAGGCTCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASRPNTS*YRLWTF
Trigger: GAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCG...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGT +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSGAHTD*ASRVVR
Trigger: ACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCC...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFGAVAT*DHVTLS
Trigger: GGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCC...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAGCTCAGGGGTGGCTaGAGCACGGAGGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPQLRGG*STEGDG
Trigger: TCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTaGCTGGAGCACGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGASAQG*LEHGGR
Trigger: TCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGCCTCAGCTCAGGGGTaGCTGGAGCACGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVASAQG*LEHGGR
Trigger: TCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCGCAGTCTGTGAGGGGTaGGGAACACAAACACCGGAC +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFAVCEG*GTQTPD
Trigger: GTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGC...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGAGGCCTGAGTTGGGCTaGCTGCCAGAGACAGACCCC +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVRPELG*LPETDP
Trigger: GGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACCTTGCTGCCTTTCTTaGGGGCACTGGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAPCCLS*GHWVVA
Trigger: TGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCACCTTGCTGCCTTTCTTaGGGGCACTGGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASPCCLS*GHWVVA
Trigger: TGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGG...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPAGCLG*GSAGLH
Trigger: GTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNAGCLG*GSAGLH
Trigger: GTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGC...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCACCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCAGGAAAGGGGTAGGGTaGGGACCCTGTCCGTCTAAA +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFRKGVG*GPCPSK
Trigger: TTTAGACGGACAGGGTCCTCACCCTACCCCTTTCCT...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCGCAGAGGCTGCAGTaGGATGGGACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLPQRLQ*DGTPTP
Trigger: TGGGGTGGGAGTCCCATCTCACTGCAGCCTCTGCGG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582155.5
ENST00000583378.5
CDS-3UTR GCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCGAGACCAAGTCGCCATaGCCACTCTCGGCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSETKSP*PLSAPE
Trigger: CTCCGGCGCCGAGAGTGGGCATGGCGACTTGGTCTC...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361665.7
CDS-3UTR GCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATCAAGGCCACTGCTCTaGCGCTCCAGCCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGASRPLL*RSSQQV
Trigger: AACCTGCTGGCTGGAGCGGCAGAGCAGTGGCCTTGA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCCACTAGGCACCTGTaGAGGGAAGCTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPPTRHL*REALPS
Trigger: ACTGGGGAGAGCTTCCCTGCACAGGTGCCTAGTGGG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAAGGCAGCTCTGGGCCTaGTGTGTCATTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGARQLWA*CVIGCA
Trigger: GGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCT...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAGGCAGCTCTGGGCCTaGTGTGTCATTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASRQLWA*CVIGCA
Trigger: GGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCT...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGGCAGCTCTGGGCCTaGTGTGTCATTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFRQLWA*CVIGCA
Trigger: GGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCAGGCAGCTCTGGGCCTaGTGTGTCATTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPRQLWA*CVIGCA
Trigger: GGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCT...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGACCGCCATCTTGTTCTTaGCCCGGCGCCGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGPPSCS*PGAGCL
Trigger: GAGACATCCGGCGCCGGGGCAAGAACAAGATGGCGG...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGCCGCCATCTTGTTCTTaGCCCGGCGCCGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVPPSCS*PGAGCL
Trigger: GAGACATCCGGCGCCGGGGCAAGAACAAGATGGCGG...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCTTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSFGFLS*RRACWS
Trigger: CGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAA...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCCCGTACCCCACCCTaGCAGAACACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPPRTPP*QNTRDE
Trigger: CTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACCCCGTACCCCACCCTaGCAGAACACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAPRTPP*QNTRDE
Trigger: CTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCACCCCGTACCCCACCCTaGCAGAACACAAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASPRTPP*QNTRDE
Trigger: CTCATCCCTTGTGTTCTGCCAGGGTGGGGTACGGGG...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGCACCCCGTTGTCTaGGCCTGTCACATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWASHPVV*ACHILE
Trigger: CTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGA...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGCAGCGTGGAGCTACTaGCCACAGGCAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFAAWSY*PQAGFP
Trigger: TGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGCCAACGGGAGCAGCGTaGAGCTACTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRPTGAA*SYWPQA
Trigger: TGCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGG...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCAACGGGAGCAGCGTaGAGCTACTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNPTGAA*SYWPQA
Trigger: TGCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTAGAGCCCTGTCAGGTTaGTGGAGCCGAAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSRALSG*WSRRWS
Trigger: ACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCT...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTGCTGTGCCATTGAGCTaGGGTGGAAAGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASAVPLS*GGKKSP
Trigger: AGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGC...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAGGGTCAGGCAGCTCTaGGCCTGCTGTGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPRVRQL*ACCVIG
Trigger: GCCAATGACACAGCAGGCCCAGAGCTGCCTGACCCT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTGCTGCCTGGAATCCTaGCCAGAGCCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASCCLES*PEPTLT
Trigger: GGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGCAGCTCAGGGGTGGCTaGAGCACGGAGGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVQLRGG*STEGDG
Trigger: TCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTG...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGCCTCAGCTCAGGGGTaGCTGGAGCACGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFASAQG*LEHGGR
Trigger: TCTCCCTCCGTGCTCCAGCCACCCCTGAGCTGAGGC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTGCAGTCTGTGAGGGGTaGGGAACACAAACACCGGAC +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAAVCEG*GTQTPD
Trigger: GTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGC...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGAGGCTGCAGTGAGATaGGACTCCCACCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPEAAVR*DSHPML
Trigger: GAGCATGGGGTGGGAGTCCCATCTCACTGCAGCCTC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582155.5
ENST00000583378.5
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCAACTGGGCCCCAGGATaGTCTCCCGGAGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFNWAPG*SPGVGE
Trigger: TTCCCCCACTCCGGGAGATCATCCTGGGGCCCAGTT...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGGAGCCGCCGGGCAGTaGAGTAATTGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAGAAGQ*SNCPGL
Trigger: TAGACCTGGACAATTACTTCACTGCCCGGCGGCTCC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCCCTCTGGGTCTCGGTaGACCAGCCAGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPPSGSR*TSQAFT
Trigger: GGTAAATGCCTGGCTGGTTCACCGAGACCCAGAGGG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASDKRLF*RAGGSL
Trigger: GAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTC...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTTTCCACCTCGGGGCTaGAGAGTAAGAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSFPPRG*RVRSPG
Trigger: GCCAGGACTTCTTACTCTTCAGCCCCGAGGTGGAAA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGACCTTGCTGCCTTTCTTaGGGGCACTGGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGPCCLS*GHWVVA
Trigger: TGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGG...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCCTTGCTGCCTTTCTTaGGGGCACTGGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPPCCLS*GHWVVA
Trigger: TGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFAGCLG*GSAGLH
Trigger: GTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLAGCLG*GSAGLH
Trigger: GTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGC...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTCCCTCCTTCCTGAAATaGGACTTTCTGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASPSFLK*DFLPPS
Trigger: GGAAGGTGGCAGAAAGTCTCATTTCAGGAAGGAGGG...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCAAGGCCACTGCTCTaGCGCTCCAGCCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVSRPLL*RSSQQV
Trigger: AACCTGCTGGCTGGAGCGGCAGAGCAGTGGCCTTGA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACTGAGTTGGGCTGACTaGCAGAGACAGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGALSWAD*QRQTPL
Trigger: CAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTTCACCGAATCCCTaGTCCGTTTCGCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASSSPNP*SVSLSR
Trigger: GCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTTCCGCGCCCTCGCCTaGCCAGGTGTCCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTFRALA*PGVLLA
Trigger: GGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGGAA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCAAGGCTGTAGTTGGTaGTCAGTGGGTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSQGCSW*SVGLQE
Trigger: CTCCTGGAGACCCACTGAGCACCAACTACAGCCTTG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCCAGGAAGTCAGCCTaGTTCTCCTTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASSRKSA*FSLLPF
Trigger: GAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCCCGCCATCTTGTTCTTaGCCCGGCGCCGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSPPSCS*PGAGCL
Trigger: GAGACATCCGGCGCCGGGGCAAGAACAAGATGGCGG...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFEPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTGTGTGTTTGGGGAGGTaGTCTCAGCCTGTCATATGC +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASVCLGR*SQPVIC
Trigger: GCATATGACAGGCTGAGAGCACCTCCCCAAACACAC...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCGGTTTCCAGAGAAACTaGTTAGCTCGGCGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPGFQRN*LARRPP
Trigger: CGGCGGACGCCGAGCTAAGCAGTTTCTCTGGAAACC...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAGAGACAGACCCCTCTaGGTCTCGGTGAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASRDRPL*VSVNQP
Trigger: TGGCTGGTTCACCGAGACCCAGAGGGGTCTGTCTCT...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATCGCACCCCGTTGTCTaGGCCTGTCACATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASSHPVV*ACHILE
Trigger: CTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGGGCAAGGCTGTAGTTaGTGCTCAGTGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPGQGCS*CSVGLQ
Trigger: CTGGAGACCCACTGAGCACCAACTACAGCCTTGCCC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGCAGCGTGGAGCTACTaGCCACAGGCAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGAAWSY*PQAGFP
Trigger: TGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGCAGCGTGGAGCTACTaGCCACAGGCAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVAAWSY*PQAGFP
Trigger: TGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGCAGCGTGGAGCTACTaGCCACAGGCAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRAAWSY*PQAGFP
Trigger: TGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCCCAACGGGAGCAGCGTaGAGCTACTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSPTGAA*SYWPQA
Trigger: TGCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGG...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCAACGGGAGCAGCGTaGAGCTACTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLPTGAA*SYWPQA
Trigger: TGCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAGAGCCCTGTCAGGTTaGTGGAGCCGAAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPRALSG*WSRRWS
Trigger: ACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTGCCATTGAGCTGGGGTaGAAAGAAGAGCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAAIELG*KEEPCQ
Trigger: CTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGC...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGAGGGTCAGGCAGCTCTaGGCCTGCTGTGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRRVRQL*ACCVIG
Trigger: GCCAATGACACAGCAGGCCCAGAGCTGCCTGACCCT...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTAGGGTCAGGCAGCTCTaGGCCTGCTGTGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPRVRQL*ACCVIG
Trigger: GCCAATGACACAGCAGGCCCAGAGCTGCCTGACCCT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFLSPGH*VPCCMC
Trigger: ACACATACAACATGGCACCCAGTGCCCTGGACTCAG...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACGCCCAAACACCTCCTaGTACAGGCTCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGARPNTS*YRLWTF
Trigger: GAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPGAHTD*ASRVVR
Trigger: ACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGT +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVGAHTD*ASRVVR
Trigger: ACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGT +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRGAHTD*ASRVVR
Trigger: ACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTCTTTCTCCGGTCCTTTaGCTTCCTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVLSPVL*LPLLPP
Trigger: CGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAG...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASLQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTCTCAAAGCCAGTGTTaGGGCCCAGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSSQSQC*GPVAPF
Trigger: GAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCAGCTCAGGGGTGGCTaGAGCACGGAGGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLQLRGG*STEGDG
Trigger: TCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGAGTGGGGGAAGCTGTaGGGTCAGGTAAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFEWGKL*GQVSIH
Trigger: GTGGATACTTACCTGACCTCACAGCTTCCCCCACTC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGAGTGGGGGAAGCTGTaGGGTCAGGTAAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASEWGKL*GQVSIH
Trigger: GTGGATACTTACCTGACCTCACAGCTTCCCCCACTC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACGGAGCCGCCGGGCAGTaGAGTAATTGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNGAAGQ*SNCPGL
Trigger: TAGACCTGGACAATTACTTCACTGCCCGGCGGCTCC...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGCCCTCTGGGTCTCGGTaGACCAGCCAGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEPSGSR*TSQAFT
Trigger: GGTAAATGCCTGGCTGGTTCACCGAGACCCAGAGGG...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSDKRLF*RAGGSL
Trigger: GAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTC...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTTTCCACCTCGGGGCTaGAGAGTAAGAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFFPPRG*RVRSPG
Trigger: GCCAGGACTTCTTACTCTTCAGCCCCGAGGTGGAAA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTTTCCACCTCGGGGCTaGAGAGTAAGAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPFPPRG*RVRSPG
Trigger: GCCAGGACTTCTTACTCTTCAGCCCCGAGGTGGAAA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCTTGCTGCCTTTCTTaGGGGCACTGGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFPCCLS*GHWVVA
Trigger: TGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTGGACAGCAGTTCATTaGACTCCTCCACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAWTAVH*TPPQAG
Trigger: ACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCA...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCCTCTTCCTGTACACTaGCCCGCAGTCATCCCATCT +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPPLPVH*PAVIPS
Trigger: AGATGGGATGACTGCGGGTCAGTGTACAGGAAGAGG...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCCACCCGAGTGGAGCTaGGCCAGCCAGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTPPEWS*ASQCLP
Trigger: AGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGG...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTACAAATCAAGGCCACTaGTCTGCCGCTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVTNQGH*SAAPAS
Trigger: GCTGGCTGGAGCGGCAGAGCAGTGGCCTTGATTTGT...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCAAGGCTGTAGTTGGTaGTCAGTGGGTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPQGCSW*SVGLQE
Trigger: CTCCTGGAGACCCACTGAGCACCAACTACAGCCTTG...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTAGGCAGCTCTGGGCCTaGTGTGTCATTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLRQLWA*CVIGCA
Trigger: GGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCT...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATCCAGCTGGGAGGCCTaGACAGGGTTAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASSSWEA*TGLKPS
Trigger: AGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTCATCCCGGCTCATCTaGTTGTCCAGGAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPSSRLI*LSRKSA
Trigger: GGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCACCGCCATCTTGTTCTTaGCCCGGCGCCGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAPPSCS*PGAGCL
Trigger: GAGACATCCGGCGCCGGGGCAAGAACAAGATGGCGG...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLRALSR*RSSTSR
Trigger: GCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPREPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGEPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCCAGTCACTCCAACCTaGTGCCTGGAATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPPVTPT*CLESWP
Trigger: TGGCCAGGATTCCAGGCAGCAGGTTGGAGTGACTGG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACGGTTTCCAGAGAAACTaGTTAGCTCGGCGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNGFQRN*LARRPP
Trigger: CGGCGGACGCCGAGCTAAGCAGTTTCTCTGGAAACC...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGGTTTCCAGAGAAACTaGTTAGCTCGGCGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGGFQRN*LARRPP
Trigger: CGGCGGACGCCGAGCTAAGCAGTTTCTCTGGAAACC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGTCTGCTGGAAACTGTaGAGGGAAGCTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASVCWKL*REALPS
Trigger: ACTGGGGAGAGCTTCCCTGCACAGTTTCCAGCAGAC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGTCTGCTGGAAACTGTaGAGGGAAGCTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFVCWKL*REALPS
Trigger: ACTGGGGAGAGCTTCCCTGCACAGTTTCCAGCAGAC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCCACCCCATGCTCCGTaGTCAAGCTGCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPPPHAP*SSCRGK
Trigger: CTTTCCTCTGCAGCTTGAGCACGGAGCATGGGGTGG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582155.5
ENST00000583378.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTACAGGCCTTTCGTCTTaGGTCAGAGTGTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPTGLSS*VRVSRL
Trigger: GAGGCGGGACACTCTGACCCAAGACGAAAGGCCTGT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTACAGGCCTTTCGTCTTaGGTCAGAGTGTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVTGLSS*VRVSRL
Trigger: GAGGCGGGACACTCTGACCCAAGACGAAAGGCCTGT...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGAGAGACAGACCCCTCTaGGTCTCGGTGAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRRDRPL*VSVNQP
Trigger: TGGCTGGTTCACCGAGACCCAGAGGGGTCTGTCTCT...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACATCTTGGAGGCCACTaGAACTCTCGAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPHLGGH*NSRGRG
Trigger: GCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGGCCTGTCACATCTTaGAGGCCACTGGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVGPVTS*RPLELS
Trigger: CGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCC...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGTCGCACCCCGTTGTCTaGGCCTGTCACATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRSHPVV*ACHILE
Trigger: CTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGA...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTCGCACCCCGTTGTCTaGGCCTGTCACATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNSHPVV*ACHILE
Trigger: CTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACGGGCAAGGCTGTAGTTaGTGCTCAGTGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNGQGCS*CSVGLQ
Trigger: CTGGAGACCCACTGAGCACCAACTACAGCCTTGCCC...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGGGCAAGGCTGTAGTTaGTGCTCAGTGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPGQGCS*CSVGLQ
Trigger: CTGGAGACCCACTGAGCACCAACTACAGCCTTGCCC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGGGCAAGGCTGTAGTTaGTGCTCAGTGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVGQGCS*CSVGLQ
Trigger: CTGGAGACCCACTGAGCACCAACTACAGCCTTGCCC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGGGCAAGGCTGTAGTTaGTGCTCAGTGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRGQGCS*CSVGLQ
Trigger: CTGGAGACCCACTGAGCACCAACTACAGCCTTGCCC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCGCAGCGTGGAGCTACTaGCCACAGGCAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSAAWSY*PQAGFP
Trigger: TGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGC...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGCAGCGTGGAGCTACTaGCCACAGGCAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPAAWSY*PQAGFP
Trigger: TGGAAAGCCTGCCTGTGGCCAGTAGCTCCACGCTGC...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTAGAGCCCTGTCAGGTTaGTGGAGCCGAAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVRALSG*WSRRWS
Trigger: ACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCT...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGAGAGCCCTGTCAGGTTaGTGGAGCCGAAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRRALSG*WSRRWS
Trigger: ACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCT...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGAGAGCCCTGTCAGGTTaGTGGAGCCGAAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVRALSG*WSRRWS
Trigger: ACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAAGGGTCAGGCAGCTCTaGGCCTGCTGTGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPRVRQL*ACCVIG
Trigger: GCCAATGACACAGCAGGCCCAGAGCTGCCTGACCCT...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASREEGL*LESKER
Trigger: CCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCT...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSRMRLS*ASLNWY
Trigger: ATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGCTCCAGATTCAGGATaGTGTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASAPDSG*CPACAC
Trigger: GCAAGCGCAAGCTGGACACCATCCTGAATCTGGAGC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCGCCCAAACACCTCCTaGTACAGGCTCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNRPNTS*YRLWTF
Trigger: GAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGT +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEGAHTD*ASRVVR
Trigger: ACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCC...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGT +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFGAHTD*ASRVVR
Trigger: ACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCTTTCTCCGGTCCTTTaGCTTCCTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLLSPVL*LPLLPP
Trigger: CGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGCTTTCTCCGGTCCTTTaGCTTCCTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMELSPVL*LPLLPP
Trigger: CGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAG...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTCAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASQFRSW*ASNPLL
Trigger: AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTG...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSLQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACCCTGTCCGTCTAAATaGTCTGGCCACTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAPCPSK*SGHFHS
Trigger: GGAGTGGAAGTGGCCAGACCATTTAGACGGACAGGG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCCCTGTCCGTCTAAATaGTCTGGCCACTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPPCPSK*SGHFHS
Trigger: GGAGTGGAAGTGGCCAGACCATTTAGACGGACAGGG...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTGCTGCCTGGAATCCTaGCCAGAGCCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPCCLES*PEPTLT
Trigger: GGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTCTCAAAGCCAGTGTTaGGGCCCAGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFSQSQC*GPVAPF
Trigger: GAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVGAVAT*DHVTLS
Trigger: GGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCCAGCTCAGGGGTGGCTaGAGCACGGAGGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTQLRGG*STEGDG
Trigger: TCCATCTCCCTCCGTGCTCCAGCCACCCCTGAGCTG...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTCTCTCCCCTCTCCCTaGCAGGTCACAGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFSLPSP*QVTEIN
Trigger: ATTTATCTCTGTGACCTGCCAGGGAGAGGGGAGAGA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGAGGCTGCAGTGAGATaGGACTCCCACCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPEAAVR*DSHPML
Trigger: GAGCATGGGGTGGGAGTCCCATCTCACTGCAGCCTC...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000582155.5
ENST00000583378.5
CDS-3UTR TCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGACCTCAAGGGCCCACGTaGCTTACTTTCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGPQGPT*LTFSTV
Trigger: GACTGTGGAGAAAGTAAGTCACGTGGGCCCTTGAGG...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR TCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGAGTGGGGGAAGCTGTaGGGTCAGGTAAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPREWGKL*GQVSIH
Trigger: GTGGATACTTACCTGACCTCACAGCTTCCCCCACTC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCCCCTCTGGGTCTCGGTaGACCAGCCAGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTPSGSR*TSQAFT
Trigger: GGTAAATGCCTGGCTGGTTCACCGAGACCCAGAGGG...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTTTCCACCTCGGGGCTaGAGAGTAAGAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNFPPRG*RVRSPG
Trigger: GCCAGGACTTCTTACTCTTCAGCCCCGAGGTGGAAA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATGGACAGCAGTTCATTaGACTCCTCCACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAWTAVH*TPPQAG
Trigger: ACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCCTCTTCCTGTACACTaGCCCGCAGTCATCCCATCT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPPLPVH*PAVIPS
Trigger: AGATGGGATGACTGCGGGTCAGTGTACAGGAAGAGG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGAGGAAAGGGGTAGGGTaGGGACCCTGTCCGTCTAAA +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRRKGVG*GPCPSK
Trigger: TTTAGACGGACAGGGTCCTCACCCTACCCCTTTCCT...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCCCCTCCTTCCTGAAATaGGACTTTCTGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFPSFLK*DFLPPS
Trigger: GGAAGGTGGCAGAAAGTCTCATTTCAGGAAGGAGGG...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACCCTCCTTCCTGAAATaGGACTTTCTGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAPSFLK*DFLPPS
Trigger: GGAAGGTGGCAGAAAGTCTCATTTCAGGAAGGAGGG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGGAGTGGCAAGGCAGTaGATGACATGCGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASGVARQ*MTCVML
Trigger: CAACATCACGCATGTCATTCACTGCCTTGCCACTCC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATACACATGCAGGCTCTaGTGGAGACAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASYTCRL*WRQWEP
Trigger: AGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTACACATGCAGGCTCTaGTGGAGACAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFYTCRL*WRQWEP
Trigger: AGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGCTGAGTTGGGCTGACTaGCAGAGACAGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMELSWAD*QRQTPL
Trigger: CAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAG...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATCTTCACCGAATCCCTaGTCCGTTTCGCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASSSPNP*SVSLSR
Trigger: GCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGACAAGGCTGTAGTTGGTaGTCAGTGGGTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGQGCSW*SVGLQE
Trigger: CTCCTGGAGACCCACTGAGCACCAACTACAGCCTTG...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTCAAGGCTGTAGTTGGTaGTCAGTGGGTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVQGCSW*SVGLQE
Trigger: CTCCTGGAGACCCACTGAGCACCAACTACAGCCTTG...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAAGGCAGCTCTGGGCCTaGTGTGTCATTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVARQLWA*CVIGCA
Trigger: GGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCT...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTCCAGCTGGGAGGCCTaGACAGGGTTAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNSSWEA*TGLKPS
Trigger: AGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCCAGCTGGGAGGCCTaGACAGGGTTAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPSSWEA*TGLKPS
Trigger: AGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGA...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCAAGAAGAGGAAGAACTaGCTTCAGAGCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: WPLPLHPSGAEPASACLFKKRKN*LQSCLG
Trigger: CCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTT...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTCCAGGAAGTCAGCCTaGTTCTCCTTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFSRKSA*FSLLPF
Trigger: GAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCCGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTRALSR*RSSTSR
Trigger: GCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCG...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCACGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGC +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVARALSR*RSSTSR
Trigger: GCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCG...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPEPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTGAGCCAGCCAGTGCCTaGCTCTTCCTGTACACTGAC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLEPASA*LFLYTD
Trigger: GTCAGTGTACAGGAAGAGGCAGGCACTGGCTGGCTC...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTCTCCATCATTCCTCTaGCTCACAGCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSSPSFL*LTAVPE
Trigger: TTCTGGGACTGCTGTGAGGCAGAGGAATGATGGAGA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTCCATCATTCCTCTaGCTCACAGCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWASPSFL*LTAVPE
Trigger: TTCTGGGACTGCTGTGAGGCAGAGGAATGATGGAGA...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGTCTGCTGGAAACTGTaGAGGGAAGCTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRVCWKL*REALPS
Trigger: ACTGGGGAGAGCTTCCCTGCACAGTTTCCAGCAGAC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGCTCCGTGCTCAAGCTaGAGAGGAAAGCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPAPCSS*RGKQAP
Trigger: GGGAGCTTGCTTTCCTCTGCAGCTTGAGCACGGAGC...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582155.5
CDS-3UTR GCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCACCCCATGCTCCGTaGTCAAGCTGCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFPPHAP*SSCRGK
Trigger: CTTTCCTCTGCAGCTTGAGCACGGAGCATGGGGTGG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582155.5
ENST00000583378.5
CDS-3UTR GCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAATATCCGCAGAGGCTaGAGTGAGATGGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPNIRRG*SEMGLP
Trigger: TGGGAGTCCCATCTCACTGCAGCCTCTGCGGATATT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583378.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCAGAGACAGACCCCTCTaGGTCTCGGTGAACCAGCCA +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSRDRPL*VSVNQP
Trigger: TGGCTGGTTCACCGAGACCCAGAGGGGTCTGTCTCT...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGAGAGCCCTGTCAGGTTaGTGGAGCCGAAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMERALSG*WSRRWS
Trigger: ACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCT...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGCTGTGCCATTGAGCTaGGGTGGAAAGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPAVPLS*GGKKSP
Trigger: AGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGCTGTGCCATTGAGCTaGGGTGGAAAGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRAVPLS*GGKKSP
Trigger: AGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACGCTGTGCCATTGAGCTaGGGTGGAAAGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNAVPLS*GGKKSP
Trigger: AGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGC...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAREEGL*LESKER
Trigger: CCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCT...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPLSPGH*VPCCMC
Trigger: ACACATACAACATGGCACCCAGTGCCCTGGACTCAG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPLSPGH*VPCCMC
Trigger: ACACATACAACATGGCACCCAGTGCCCTGGACTCAG...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGARMRLS*ASLNWY
Trigger: ATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCACGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASRMRLS*ASLNWY
Trigger: ATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGCTCCAGATTCAGGATaGTGTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPAPDSG*CPACAC
Trigger: GCAAGCGCAAGCTGGACACCATCCTGAATCTGGAGC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGCCCAAACACCTCCTaGTACAGGCTCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLRPNTS*YRLWTF
Trigger: GAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACGCCCAAACACCTCCTaGTACAGGCTCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPRPNTS*YRLWTF
Trigger: GAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCGCCCAAACACCTCCTaGTACAGGCTCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFRPNTS*YRLWTF
Trigger: GAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSQFRSW*ASNPLL
Trigger: AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGCCCTGTCCGTCTAAATaGTCTGGCCACTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRPCPSK*SGHFHS
Trigger: GGAGTGGAAGTGGCCAGACCATTTAGACGGACAGGG...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTCCCTGTCCGTCTAAATaGTCTGGCCACTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVPCPSK*SGHFHS
Trigger: GGAGTGGAAGTGGCCAGACCATTTAGACGGACAGGG...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATGCTGCCTGGAATCCTaGCCAGAGCCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGCCLES*PEPTLT
Trigger: GGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEGAVAT*DHVTLS
Trigger: GGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCC...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCTCAAGGGCCCACGTaGCTTACTTTCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLPQGPT*LTFSTV
Trigger: GACTGTGGAGAAAGTAAGTCACGTGGGCCCTTGAGG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCTCAAGGGCCCACGTaGCTTACTTTCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFPQGPT*LTFSTV
Trigger: GACTGTGGAGAAAGTAAGTCACGTGGGCCCTTGAGG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCAACTCAGCAGAATGGTaGACTGGAGAAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPNSAEW*TGEVLP
Trigger: CGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTT...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTAACTGGGCCCCAGGATaGTCTCCCGGAGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTNWAPG*SPGVGE
Trigger: TTCCCCCACTCCGGGAGATCATCCTGGGGCCCAGTT...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGGAGCCGCCGGGCAGTaGAGTAATTGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTGAAGQ*SNCPGL
Trigger: TAGACCTGGACAATTACTTCACTGCCCGGCGGCTCC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACTCGAGGGCGAGGCCTaGGTTGGGCTGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLLEGEA*VGLTAR
Trigger: TCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVDKRLF*RAGGSL
Trigger: GAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPDKRLF*RAGGSL
Trigger: GAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTTCCAAATCAAATGGTaGCTCTGTCCCGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSFQIKW*LCPGQK
Trigger: CTTCTGACCGGGACAGAGTCACCATTTGATTTGGAA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATTTCCACCTCGGGGCTaGAGAGTAAGAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPFPPRG*RVRSPG
Trigger: GCCAGGACTTCTTACTCTTCAGCCCCGAGGTGGAAA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATWWQVG*VQGTGC
Trigger: GCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTGGACAGCAGTTCATTaGACTCCTCCACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNWTAVH*TPPQAG
Trigger: ACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCTCTTCCTGTACACTaGCCCGCAGTCATCCCATCT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLPLPVH*PAVIPS
Trigger: AGATGGGATGACTGCGGGTCAGTGTACAGGAAGAGG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCTCTTCCTGTACACTaGCCCGCAGTCATCCCATCT +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFPLPVH*PAVIPS
Trigger: AGATGGGATGACTGCGGGTCAGTGTACAGGAAGAGG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAAGGAAAGGGGTAGGGTaGGGACCCTGTCCGTCTAAA +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPRKGVG*GPCPSK
Trigger: TTTAGACGGACAGGGTCCTCACCCTACCCCTTTCCT...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTAGGAAAGGGGTAGGGTaGGGACCCTGTCCGTCTAAA +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLRKGVG*GPCPSK
Trigger: TTTAGACGGACAGGGTCCTCACCCTACCCCTTTCCT...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGGAGTGGCAAGGCAGTaGATGACATGCGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGGVARQ*MTCVML
Trigger: CAACATCACGCATGTCATTCACTGCCTTGCCACTCC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATACACATGCAGGCTCTaGTGGAGACAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGPGEDGIHMQALMETMGYTCRL*WRQWEP
Trigger: AGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTACACATGCAGGCTCTaGTGGAGACAATGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVYTCRL*WRQWEP
Trigger: AGGCTCCCATTGTCTCCATCAGAGCCTGCATGTGTA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTAATTGTCCAGGTCTATaGTCTTGGGGTGGATACCAT +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASNCPGL*SWGGYH
Trigger: ATGGTATCCACCCCAAGAGCATAGACCTGGACAATT...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTCTTCACCGAATCCCTaGTCCGTTTCGCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNSSPNP*SVSLSR
Trigger: GCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACAAGGCTGTAGTTGGTaGTCAGTGGGTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPQGCSW*SVGLQE
Trigger: CTCCTGGAGACCCACTGAGCACCAACTACAGCCTTG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTTCCAGCTGGGAGGCCTaGACAGGGTTAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLSSWEA*TGLKPS
Trigger: AGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGA...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATCCAGCTGGGAGGCCTaGACAGGGTTAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPSSWEA*TGLKPS
Trigger: AGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTCCAGGAAGTCAGCCTaGTTCTCCTTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNSRKSA*FSLLPF
Trigger: GAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATCATCCCGGCTCATCTaGTTGTCCAGGAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPSSRLI*LSRKSA
Trigger: GGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCTCATCCCGGCTCATCTaGTTGTCCAGGAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFSSRLI*LSRKSA
Trigger: GGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCACCAGTCACTCCAACCTaGTGCCTGGAATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAPVTPT*CLESWP
Trigger: TGGCCAGGATTCCAGGCAGCAGGTTGGAGTGACTGG...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGTGTGTTTGGGGAGGTaGTCTCAGCCTGTCATATGC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRVCLGR*SQPVIC
Trigger: GCATATGACAGGCTGAGAGCACCTCCCCAAACACAC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATATGTCCGCAGAGGCTaGAGTGAGATGGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPYVRRG*SEMGLP
Trigger: TGGGAGTCCCATCTCACTGCAGCCTCTGCGGACATA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582155.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAGGCATTTACCTCAGTaGTTGGCACCTGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPRHLPQ*LAPGTC
Trigger: ACAGGTTCCAGGTGCCAACCACTGAGGTAAATGCCT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGGGCCTGTCACATCTTaGAGGCCACTGGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTGPVTS*RPLELS
Trigger: CGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGCCATTGAGCTGGGGTaGAAAGAAGAGCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFAIELG*KEEPCQ
Trigger: CTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGGCCATTGAGCTGGGGTaGAAAGAAGAGCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEAIELG*KEEPCQ
Trigger: CTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGC...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGGCTGTGCCATTGAGCTaGGGTGGAAAGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEAVPLS*GGKKSP
Trigger: AGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGC...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTGCTGTGCCATTGAGCTaGGGTGGAAAGAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLAVPLS*GGKKSP
Trigger: AGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGC...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPREEGL*LESKER
Trigger: CCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCT...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNLSPGH*VPCCMC
Trigger: ACACATACAACATGGCACCCAGTGCCCTGGACTCAG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPRMRLS*ASLNWY
Trigger: ATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTGCTCCAGATTCAGGATaGTGTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLAPDSG*CPACAC
Trigger: GCAAGCGCAAGCTGGACACCATCCTGAATCTGGAGC...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGGCTCCAGATTCAGGATaGTGTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEAPDSG*CPACAC
Trigger: GCAAGCGCAAGCTGGACACCATCCTGAATCTGGAGC...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPQFRSW*ASNPLL
Trigger: AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAQFRSW*ASNPLL
Trigger: AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNLQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCAGTGTTGGGGCCCAGTaGCTCCATTCGATTGAAACA +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPSVGAQ*LHSIET
Trigger: TGTTTCAATCGAATGGAGCCACTGGGCCCCAACACT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAGTGTTGGGGCCCAGTaGCTCCATTCGATTGAAACA +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASSVGAQ*LHSIET
Trigger: TGTTTCAATCGAATGGAGCCACTGGGCCCCAACACT...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGTCTCAAAGCCAGTGTTaGGGCCCAGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMESQSQC*GPVAPF
Trigger: GAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGA...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAGCAGTCTGTGAGGGGTaGGGAACACAAACACCGGAC +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAAVCEG*GTQTPD
Trigger: GTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGC...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGCTGGAAATGTCTGCTaGAAACTGTGCAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAAGNVC*KLCREA
Trigger: AGCTTCCCTGCACAGTTTCCAGCAGACATTTCCAGC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357480.9
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGCTGGAAATGTCTGCTaGAAACTGTGCAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASAGNVC*KLCREA
Trigger: AGCTTCCCTGCACAGTTTCCAGCAGACATTTCCAGC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGAACTCAGCAGAATGGTaGACTGGAGAAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVNSAEW*TGEVLP
Trigger: CGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGAGTGGGGGAAGCTGTaGGGTCAGGTAAGTATCCAC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTEWGKL*GQVSIH
Trigger: GTGGATACTTACCTGACCTCACAGCTTCCCCCACTC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCTCGAGGGCGAGGCCTaGGTTGGGCTGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKELEGEA*VGLTAR
Trigger: TCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLDKRLF*RAGGSL
Trigger: GAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTC...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSDKRLF*RAGGSL
Trigger: GAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTC...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATTCCAAATCAAATGGTaGCTCTGTCCCGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAFQIKW*LCPGQK
Trigger: CTTCTGACCGGGACAGAGTCACCATTTGATTTGGAA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTTTCCACCTCGGGGCTaGAGAGTAAGAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTFPPRG*RVRSPG
Trigger: GCCAGGACTTCTTACTCTTCAGCCCCGAGGTGGAAA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATGGACAGCAGTTCATTaGACTCCTCCACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPWTAVH*TPPQAG
Trigger: ACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCTGGACAGCAGTTCATTaGACTCCTCCACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSWTAVH*TPPQAG
Trigger: ACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCA...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCTCCTTCCTGAAATaGGACTTTCTGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLPSFLK*DFLPPS
Trigger: GGAAGGTGGCAGAAAGTCTCATTTCAGGAAGGAGGG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGGGTTTATCACACCAGTaGTCTAGGCCCACCAGTCAC +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEGLSHQ*SRPTSH
Trigger: GTGACTGGTGGGCCTAGATCACTGGTGTGATAAACC...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTAATTGTCCAGGTCTATaGTCTTGGGGTGGATACCAT +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWANCPGL*SWGGYH
Trigger: ATGGTATCCACCCCAAGAGCATAGACCTGGACAATT...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCCAAGGCTGTAGTTGGTaGTCAGTGGGTCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTQGCSW*SVGLQE
Trigger: CTCCTGGAGACCCACTGAGCACCAACTACAGCCTTG...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAGAAGAGGAAGAACTaGCTTCAGAGCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFKKRKN*LQSCLG
Trigger: CCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTCATCCCGGCTCATCTaGTTGTCCAGGAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTSSRLI*LSRKSA
Trigger: GGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGC +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTRALSR*RSSTSR
Trigger: GCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCG...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTGTGTGTTTGGGGAGGTaGTCTCAGCCTGTCATATGC +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLVCLGR*SQPVIC
Trigger: GCATATGACAGGCTGAGAGCACCTCCCCAAACACAC...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGCCAGGTCTATGCTCTTaGGGTGGATACCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVPGLCS*GGYHSH
Trigger: ATGGCTATGGTATCCACCCCAAGAGCATAGACCTGG...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNREEGL*LESKER
Trigger: CCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCT...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPREEGL*LESKER
Trigger: CCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLLSPGH*VPCCMC
Trigger: ACACATACAACATGGCACCCAGTGCCCTGGACTCAG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFRMRLS*ASLNWY
Trigger: ATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPRMRLS*ASLNWY
Trigger: ATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGCTCCAGATTCAGGATaGTGTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTAPDSG*CPACAC
Trigger: GCAAGCGCAAGCTGGACACCATCCTGAATCTGGAGC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTTTCTCCGGTCCTTTaGCTTCCTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTLSPVL*LPLLPP
Trigger: CGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAG...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTCAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPQFRSW*ASNPLL
Trigger: AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTG...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLLQFRS*WASNPL
Trigger: AAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAG...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTGCTGCCTGGAATCCTaGCCAGAGCCAACCTTAACC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTCCLES*PEPTLT
Trigger: GGTTAAGGTTGGCTCTGGCCAGGATTCCAGGCAGCA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTCTCAAAGCCAGTGTTaGGGCCCAGTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTSQSQC*GPVAPF
Trigger: GAATGGAGCCACTGGGCCCCAACACTGGCTTTGAGA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTCTCTCCCCTCTCCCTaGCAGGTCACAGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: GPGPGPALLQFRSWWASNSLPSP*QVTEIN
Trigger: ATTTATCTCTGTGACCTGCCAGGGAGAGGGGAGAGA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGCTGGAAATGTCTGCTaGAAACTGTGCAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVAGNVC*KLCREA
Trigger: AGCTTCCCTGCACAGTTTCCAGCAGACATTTCCAGC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTAACTCAGCAGAATGGTaGACTGGAGAAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLNSAEW*TGEVLP
Trigger: CGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTT...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACCCTCTGGGTCTCGGTaGACCAGCCAGGCATTTACC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLPSGSR*TSQAFT
Trigger: GGTAAATGCCTGGCTGGTTCACCGAGACCCAGAGGG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCAGGCCTGAGTTGGGCTaGCTGCCAGAGACAGACCCC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATRPELG*LPETDP
Trigger: GGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTTCCAAATCAAATGGTaGCTCTGTCCCGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVFQIKW*LCPGQK
Trigger: CTTCTGACCGGGACAGAGTCACCATTTGATTTGGAA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATAGCLG*GSAGLH
Trigger: GTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGC...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATTGAAACATGGCCAATaGTATCCAAGAGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASLKHGQ*YPRAPL
Trigger: AAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTTGAAACATGGCCAATaGTATCCAAGAGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPLKHGQ*YPRAPL
Trigger: AAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACCCACTAGGCACCTGTaGAGGGAAGCTCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLPTRHL*REALPS
Trigger: ACTGGGGAGAGCTTCCCTGCACAGGTGCCTAGTGGG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GPGPGPGPALLQFRSWWATLTRH*FCYAGN
Trigger: ATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGT...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCACTTCCATGGCCTaGATTTCCATGATGGACATG +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPFTSMA*ISMMDM
Trigger: CATGTCCATCATGGAAATGCAGGCCATGGAAGTGAA...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATTCACTTCCATGGCCTaGATTTCCATGATGGACATG +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASFTSMA*ISMMDM
Trigger: CATGTCCATCATGGAAATGCAGGCCATGGAAGTGAA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTTCACTTCCATGGCCTaGATTTCCATGATGGACATG +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFFTSMA*ISMMDM
Trigger: CATGTCCATCATGGAAATGCAGGCCATGGAAGTGAA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATMARAR*SSRLIC
Trigger: GCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCAT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR GCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLRALSR*RSSTSR
Trigger: GCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTATGCTGGAAATGTCTaGTGGAAACTGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPYAGNV*WKLCRE
Trigger: TTCCCTGCACAGTTTCCAGCAGACATTTCCAGCATA...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTAAGGTTTATTTTCTTTaGCTGGAGCTACAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SGHFHSTRVELSQPVPASKVYFL*LELQAF
Trigger: AAAGGCCTGTAGCTCCAGCCAAAGAAAATAAACCTT...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGCAGAATGGTGAACTaGAGAAGTCCTTCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFSRMVN*RSPSVK
Trigger: CTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACCAGGTCTATGCTCTTaGGGTGGATACCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPPGLCS*GGYHSH
Trigger: ATGGCTATGGTATCCACCCCAAGAGCATAGACCTGG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCAGGCATTTACCTCAGTaGTTGGCACCTGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFRHLPQ*LAPGTC
Trigger: ACAGGTTCCAGGTGCCAACCACTGAGGTAAATGCCT...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACATCTTGGAGGCCACTaGAACTCTCGAGGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLHLGGH*NSRGRG
Trigger: GCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTGGGCCTGTCACATCTTaGAGGCCACTGGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTGPVTS*RPLELS
Trigger: CGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCC...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCGCTGGAAATGTCTGCTaGAAACTCAGCATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSAGNVC*KLSILP
Trigger: GGGGAGAATGCTGAGTTTCCAGCAGACATTTCCAGC...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCAGTGTTGGGGCCCAGTaGCTCCATTCGATTGAAACA +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSSVGAQ*LHSIET
Trigger: TGTTTCAATCGAATGGAGCCACTGGGCCCCAACACT...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTTCTCTCCCCTCTCCCTaGCAGGTCACAGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLSLPSP*QVTEIN
Trigger: ATTTATCTCTGTGACCTGCCAGGGAGAGGGGAGAGA...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGCTGGAAATGTCTGCTaGAAACTGTGCAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPAGNVC*KLCREA
Trigger: AGCTTCCCTGCACAGTTTCCAGCAGACATTTCCAGC...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR TCA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCAGAGAAAGCATTGCTaGAGGACCAGAATGTTTATG +
Preference number: 4 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPQRKHC*RTRMFM
Trigger: CATAAACATTCTGGTCCTTCAGCAATGCTTTCTCTG...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
CDS-3UTR TCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCAGGTAGGGCAGGCATaGGAGCTGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATQVGQA*ELSWIL
Trigger: CAGGATCCAGCTCAGCTCTCATGCCTGCCCTACCTG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCCTTGCTGCCTTTCTTaGGGGCACTGGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATPCCLS*GHWVVA
Trigger: TGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR TCA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGTGGCTCCATTCGATTaGAACATGGCCAATGATATC +
Preference number: 4 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVVAPFD*NMANDI
Trigger: GATATCATTGGCCATGTTTCAATCGAATGGAGCCAC...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACTGAGTTGGGCTGACTaGCAGAGACAGACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLLSWAD*QRQTPL
Trigger: CAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTATGCTGGAAATGTCTaGTGGAAACTCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: PGPGPALLQFRSWWASNPYAGNV*WKLSIL
Trigger: GAGAATGCTGAGTTTCCAGCAGACATTTCCAGCATA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFTLTRH*FCYAGN
Trigger: ATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASTLTRH*FCYAGN
Trigger: ATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGT...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGAAGAAGAGGAAGAACTaGCTTCAGAGCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMEKKRKN*LQSCLG
Trigger: CCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTT...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCAAGAAGAGGAAGAACTaGCTTCAGAGCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFKKRKN*LQSCLG
Trigger: CCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTT...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTCATCCCGGCTCATCTaGTTGTCCAGGAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTSSRLI*LSRKSA
Trigger: GGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTCTCCATCATTCCTCTaGCTCACAGCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTSPSFL*LTAVPE
Trigger: TTCTGGGACTGCTGTGAGGCAGAGGAATGATGGAGA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCATCTCCATCATTCCTCTaGCTCACAGCAGTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVASPSFL*LTAVPE
Trigger: TTCTGGGACTGCTGTGAGGCAGAGGAATGATGGAGA...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGTATGCTGGAAATGTCTaGTGGAAACTGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRYAGNV*WKLCRE
Trigger: TTCCCTGCACAGTTTCCAGCAGACATTTCCAGCATA...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGAGCAGAATGGTGAACTaGAGAAGTCCTTCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRSRMVN*RSPSVK
Trigger: CTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCT...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTAGCAGAATGGTGAACTaGAGAAGTCCTTCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPSRMVN*RSPSVK
Trigger: CTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAREEGL*LESKER
Trigger: CCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCT...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTAGGGGCTGTTGCAACATaGGACCACGTGACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLGAVAT*DHVTLS
Trigger: GGAAAGGGTCACGTGGTCCCATGTTGCAACAGCCCC...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
3UTR CAA 72 bp TGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTaGACTCTAAATCTCAAAGCCAGTGTTGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WDHVTLSCSLYP*TLNLKASVGAQ
Trigger: CTGGGCCCCAACACTGGCTTTGAGATTTAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCGGAGCCGCCGGGCAGTaGAGTAATTGTCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATGAAGQ*SNCPGL
Trigger: TAGACCTGGACAATTACTTCACTGCCCGGCGGCTCC...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTTCCAAATCAAATGGTaGCTCTGTCCCGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTFQIKW*LCPGQK
Trigger: CTTCTGACCGGGACAGAGTCACCATTTGATTTGGAA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGTTGAAACATGGCCAATaGTATCCAAGAGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: NTNTGPGEDGIHMQALMELKHGQ*YPRAPL
Trigger: AAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAA...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTTTGAAACATGGCCAATaGTATCCAAGAGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLLKHGQ*YPRAPL
Trigger: AAGGGGAGCTCTTGGATATCATTGGCCATGTTTCAA...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCGTGGCTCCATTCGATTaGAACATGGCCAATGATATC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSVAPFD*NMANDI
Trigger: GATATCATTGGCCATGTTTCAATCGAATGGAGCCAC...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTGGAGTGGCAAGGCAGTaGATGACATGCGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTGVARQ*MTCVML
Trigger: CAACATCACGCATGTCATTCACTGCCTTGCCACTCC...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAAATTGTCCAGGTCTATaGTCTTGGGGTGGATACCAT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPNCPGL*SWGGYH
Trigger: ATGGTATCCACCCCAAGAGCATAGACCTGGACAATT...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGTATGCTGGAAATGTCTaGTGGAAACTCAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRYAGNV*WKLSIL
Trigger: GAGAATGCTGAGTTTCCAGCAGACATTTCCAGCATA...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR GCA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPTLTRH*FCYAGN
Trigger: ATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATCTCAGCCTGTCATATaGACTTCTCAATCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: PGPGPGPALLQFRSWWASSQPVI*TSQSSR
Trigger: TCTAGAAGATTGAGAAGTGCATATGACAGGCTGAGA...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATATGCTGGAAATGTCTaGTGGAAACTGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPYAGNV*WKLCRE
Trigger: TTCCCTGCACAGTTTCCAGCAGACATTTCCAGCATA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCACAGGCCTTTCGTCTTaGGTCAGAGTGTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATTGLSS*VRVSRL
Trigger: GAGGCGGGACACTCTGACCCAAGACGAAAGGCCTGT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAAGCAGAATGGTGAACTaGAGAAGTCCTTCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPSRMVN*RSPSVK
Trigger: CTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCT...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGGGGCAAGGCTGTAGTTaGTGCTCAGTGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEGQGCS*CSVGLQ
Trigger: CTGGAGACCCACTGAGCACCAACTACAGCCTTGCCC...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGGCAGTCTGTGAGGGGTaGGGAACACAAACACCGGAC +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEAVCEG*GTQTPD
Trigger: GTCCGGTGTTTGTGTTCCCCACCCCTCACAGACTGC...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAAATTGTCCAGGTCTATaGTCTTGGGGTGGATACCAT +
Preference number: 4 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVANCPGL*SWGGYH
Trigger: ATGGTATCCACCCCAAGAGCATAGACCTGGACAATT...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFTLTRH*FCYAGN
Trigger: ATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGT...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCCAGCTGGGAGGCCTaGACAGGGTTAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSSWEA*TGLKPS
Trigger: AGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTATCCAGGAAGTCAGCCTaGTTCTCCTTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLSRKSA*FSLLPF
Trigger: GAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGA...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCATCCCGGCTCATCTaGTTGTCCAGGAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSSRLI*LSRKSA
Trigger: GGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR GCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTATGCTGGAAATGTCTaGTGGAAACTGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTYAGNV*WKLCRE
Trigger: TTCCCTGCACAGTTTCCAGCAGACATTTCCAGCATA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357480.9
ENST00000585291.5
CDS-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTGCTGGAAATGTCTGCTaGAAACTCAGCATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTAGNVC*KLSILP
Trigger: GGGGAGAATGCTGAGTTTCCAGCAGACATTTCCAGC...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000362042.8
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCGCCATTGAGCTGGGGTaGAAAGAAGAGCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATAIELG*KEEPCQ
Trigger: CTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGC...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCCCTGTCCGTCTAAATaGTCTGGCCACTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEPCPSK*SGHFHS
Trigger: GGAGTGGAAGTGGCCAGACCATTTAGACGGACAGGG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTCTCTCCCCTCTCCCTaGCAGGTCACAGAGATAAAT +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTSLPSP*QVTEIN
Trigger: ATTTATCTCTGTGACCTGCCAGGGAGAGGGGAGAGA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTGGACAGCAGTTCATTaGACTCCTCCACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATWTAVH*TPPQAG
Trigger: ACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCCCTCCTTCCTGAAATaGGACTTTCTGCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATPSFLK*DFLPPS
Trigger: GGAAGGTGGCAGAAAGTCTCATTTCAGGAAGGAGGG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR TCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGTCTTCACCGAATCCCTaGTCCGTTTCGCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKESSPNP*SVSLSR
Trigger: GCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGA...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCCAGGAAGTCAGCCTaGTTCTCCTTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSRKSA*FSLLPF
Trigger: GAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR GCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGGTGTGTTTGGGGAGGTaGTCTCAGCCTGTCATATGC +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEVCLGR*SQPVIC
Trigger: GCATATGACAGGCTGAGAGCACCTCCCCAAACACAC...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAAAGGTTTATTTTCTTTaGCTGGAGCTACAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPKVYFL*LELQAF
Trigger: AAAGGCCTGTAGCTCCAGCCAAAGAAAATAAACCTT...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACCAGGTCTATGCTCTTaGGGTGGATACCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLPGLCS*GGYHSH
Trigger: ATGGCTATGGTATCCACCCCAAGAGCATAGACCTGG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTAAGGCATTTACCTCAGTaGTTGGCACCTGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLRHLPQ*LAPGTC
Trigger: ACAGGTTCCAGGTGCCAACCACTGAGGTAAATGCCT...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTATCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATLSPGH*VPCCMC
Trigger: ACACATACAACATGGCACCCAGTGCCCTGGACTCAG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CCA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCCATTCGATTGAAACATaGCCAATGATATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSHSIET*PMISKS
Trigger: GCTCTTGGATATCATTGGCCATGTTTCAATCGAATG...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGAACTCAGCAGAATGGTaGACTGGAGAAGTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKENSAEW*TGEVLP
Trigger: CGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTT...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTCTCAGCCTGTCATATaGACTTCTCAATCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTSQPVI*TSQSSR
Trigger: TCTAGAAGATTGAGAAGTGCATATGACAGGCTGAGA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCCAGGTCTATGCTCTTaGGGTGGATACCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATPGLCS*GGYHSH
Trigger: ATGGCTATGGTATCCACCCCAAGAGCATAGACCTGG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSCGRT*NTQAGS
Trigger: GCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGAGTGTTGGGGCCCAGTaGCTCCATTCGATTGAAACA +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKESVGAQ*LHSIET
Trigger: TGTTTCAATCGAATGGAGCCACTGGGCCCCAACACT...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTTACACGGAGTCTTTATaGCAAAGAGAACATTTAGCA +
Preference number: 4 (lower is better)
Translates to: PGPALLQFRSWWASNPLLYTESL*QREHLA
Trigger: TGCTAAATGTTCTCTTTGCCATAAAGACTCCGTGTA...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR TCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCTATCCCTCCTTCCTaGAATGAGACTTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSIPPS*NETFCH
Trigger: GTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR TCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTAGTGGCTCCATTCGATTaGAACATGGCCAATGATATC +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLVAPFD*NMANDI
Trigger: GATATCATTGGCCATGTTTCAATCGAATGGAGCCAC...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTATTCACTTCCATGGCCTaGATTTCCATGATGGACATG +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLFTSMA*ISMMDM
Trigger: CATGTCCATCATGGAAATGCAGGCCATGGAAGTGAA...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCAAGAAGAGGAAGAACTaGCTTCAGAGCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATKKRKN*LQSCLG
Trigger: CCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCTACACGGAGTCTTTATaGCAAAGAGAACATTTAGCA +
Preference number: 4 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTYTESL*QREHLA
Trigger: TGCTAAATGTTCTCTTTGCCATAAAGACTCCGTGTA...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTAACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLTLTRH*FCYAGN
Trigger: ATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGT...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTTCACTTCCATGGCCTaGATTTCCATGATGGACATG +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATFTSMA*ISMMDM
Trigger: CATGTCCATCATGGAAATGCAGGCCATGGAAGTGAA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCATTCGATTGAAACATaGCCAATGATATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTHSIET*PMISKS
Trigger: GCTCTTGGATATCATTGGCCATGTTTCAATCGAATG...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTACACGGAGTCTTTATaGCAAAGAGAACATTTAGCA +
Preference number: 4 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTYTESL*QREHLA
Trigger: TGCTAAATGTTCTCTTTGCCATAAAGACTCCGTGTA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR GCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCTCAGCCTGTCATATaGACTTCTCAATCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSQPVI*TSQSSR
Trigger: TCTAGAAGATTGAGAAGTGCATATGACAGGCTGAGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCATTCGATTGAAACATaGCCAATGATATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEHSIET*PMISKS
Trigger: GCTCTTGGATATCATTGGCCATGTTTCAATCGAATG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CCA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCATTCGATTGAAACATaGCCAATGATATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATHSIET*PMISKS
Trigger: GCTCTTGGATATCATTGGCCATGTTTCAATCGAATG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS TCA 90 bp CACCACTGTGAGAGCTGCGGTCCAGGCGGGTCATGGTCTGCGAGATaGGCCCCAGGGCAGCCGGTGCCGGGAAGCCGGACAGGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: HHCESCGPGGSWSAR*APGQPVPGSRTGGC
Trigger: GCAGCCCCCTGTCCGGCTTCCCGGCACCGGCTGCCCTGGGGCTCATCTCGCAGACCATGACCCGCCTGGACCGCAGCTCTCACAGTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536222.5
ENST00000577431.1
ENST00000579537.5
ENST00000580050.1
CDS GCA 90 bp GAAACCCTGCCCGGATACCCGAGTCCGGCTGAGACCAAGTCGCCATaGCCACTCTCGGCGCCGGAGCTTCTAGCCTCCAGGGGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: ETLPGYPSPAETKSP*PLSAPELLASRGGQ
Trigger: CTGGCCGCCCCTGGAGGCTAGAAGCTCCGGCGCCGAGAGTGGGCATGGCGACTTGGTCTCAGCCGGACTCGGGTATCCGGGCAGGGTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579481.1
CDS CCA 90 bp CACTTTCTCCGGTCCTTTGGCTTCCTCTCCTGCCGCCGGGCCTGCTaGTCGGCCATCGTGCGGGGGATGAGGAGGACACTGCCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: HFLRSFGFLSCRRAC*SAIVRGMRRTLPSP
Trigger: CGGGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 90 bp GGGGGTTTCCAGAGAAACCCGAGTCCGGCTGAGACCAAGTCGCCATaGCCACTCTCGGCGCCGGAGCTTCTAGCCTCCAGGGGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: GGFQRNPSPAETKSP*PLSAPELLASRGGQ
Trigger: CTGGCCGCCCCTGGAGGCTAGAAGCTCCGGCGCCGAGAGTGGGCATGGCGACTTGGTCTCAGCCGGACTCGGGTTTCTCTGGAAACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000585062.1
CDS GCA 90 bp GCTCACTTTCTCCGGTCCTTTGGCTTCCTCTCCTGCCGCCGGGCCTaGTGGTCGGCCATCGTGCGGGGGATGAGGAGGACACTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: AHFLRSFGFLSCRRA*WSAIVRGMRRTLPS
Trigger: GGACGGCAGTGTCCTCCTCATCCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 90 bp ACAGAAGCCCTGGACCCAGGAGCAGAGGCGGGCTGGGCCACCCGGTaGCCAGCCAGCAAAGAGTTAAGGGGCCGGCTGCCTTTGGCATGG +
Preference number: 5 (lower is better)
Translates to: TEALDPGAEAGWATR*PASKELRGRLPLAW
Trigger: CCATGCCAAAGGCAGCCGGCCCCTTAACTCTTTGCTGGCTGGTCACCGGGTGGCCCAGCCCGCCTCTGCTCCTGGGTCCAGGGCTTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536222.5
ENST00000577431.1
ENST00000579537.5
ENST00000580050.1
CDS GCA 90 bp CTTCTTCCCCAGGCTCACTTTCTCCGGTCCTTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCGGCCATCGTGCGGGGGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LLPQAHFLRSFGFLS*RRACWSAIVRGMRR
Trigger: CCTCCTCATCCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGTGAGCCTGGGGAAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 90 bp AGGTTCCGTGCCAGAGCTTCCGCGCCCTCGCCTGCCCAGGTGTCCTaGTCGCCTCCATCTCGCAGCTCCTTCTCCACATCCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RFRARASAPSPAQVS*SPPSRSSFSTSCSF
Trigger: GAAGGAGCAGGATGTGGAGAAGGAGCTGCGAGATGGAGGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGGAAGCTCTGGCACGGAACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000577431.1
ENST00000580037.1
ENST00000580050.1
ENST00000582155.5
ENST00000583210.5
ENST00000583378.5
ENST00000584634.5
ENST00000585291.5
CDS CCA 90 bp ACCAGGCTAGCTGCAGACGGGAGCCAATCTCTGCATCAGGGCAGCTaGAGAAGCTGCCGCAAGGAACCAGCCCATCCCTGGGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: TRLAADGSQSLHQGS*RSCRKEPAHPWAAS
Trigger: GGAGGCGGCCCAGGGATGGGCTGGTTCCTTGCGGCAGCTTCTCCAGCTGCCCTGATGCAGAGATTGGCTCCCGTCTGCAGCTAGCCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579537.5
CDS-3UTR CAA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTTCTGCGCCGCCATCTaGTTCTTGCCCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAFCAAI*FLPRRR
Trigger: CCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGAA...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTTCTGCGCCGCCATCTaGTTCTTGCCCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSFCAAI*FLPRRR
Trigger: CCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGAA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSRSSRA*SRCRSS
Trigger: GGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 90 bp GGAGGCCACTGGAACTCTCGAGGGCGAGGCCTGAGTTGGGCTGACTaGCAGAGACAGACCCCTCTGGGTCTCGGTGAACCAGCCAGGCAT +
Preference number: 5 (lower is better)
Translates to: GGHWNSRGRGLSWAD*QRQTPLGLGEPARH
Trigger: ATGCCTGGCTGGTTCACCGAGACCCAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTGCCGCCATCTTGTTCTaGCCCCGGCGCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAAAILF*PRRRMS
Trigger: AGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGC...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATTCTGCGCCGCCATCTaGTTCTTGCCCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAFCAAI*FLPRRR
Trigger: CCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGAA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTGCGCCGCCATCTaGTTCTTGCCCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPFCAAI*FLPRRR
Trigger: CCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGAA...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PGPGPALLQFRSWWASNPRSSRA*SRCRSS
Trigger: GGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCG...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 90 bp GCCTGTCACATCTTGGAGGCCACTGGAACTCTCGAGGGCGAGGCCTaGGTTGGGCTGACTGCCAGAGACAGACCCCTCTGGGTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ACHILEATGTLEGEA*VGLTARDRPLWVSV
Trigger: CACCGAGACCCAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 90 bp CCCCTCTGGGTCTCGGTGAACCAGCCAGGCATTTACCTCAGTGGTTaGCACCTGGAACCTGTCCAGGGCCCTCACCTGACTGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PLWVSVNQPGIYLSG*HLEPVQGPHLTEEP
Trigger: CGGCTCCTCAGTCAGGTGAGGGCCCTGGACAGGTTCCAGGTGCCAACCACTGAGGTAAATGCCTGGCTGGTTCACCGAGACCCAGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 90 bp TATGTCCTAGCTGCAGACGGGAGCCAATCTCTGCATCAGGGCAGCTaGAGAAGCTGCCGCAAGGAACCAGCCCATCCCTGGGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: YVLAADGSQSLHQGS*RSCRKEPAHPWAAS
Trigger: GGAGGCGGCCCAGGGATGGGCTGGTTCCTTGCGGCAGCTTCTCCAGCTGCCCTGATGCAGAGATTGGCTCCCGTCTGCAGCTAGGACATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583210.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFLRLVE*LGANGS
Trigger: GCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTCCTTGCTGCCTTTCTaGAGGGCACTGGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFSLLPF*RALGGG
Trigger: GCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGCCGCCATCTTGTTCTaGCCCCGGCGCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: PGPGPGPALLQFRSWWASAAILF*PRRRMS
Trigger: AGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGTTCTGCGCCGCCATCTaGTTCTTGCCCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRFCAAI*FLPRRR
Trigger: CCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGAA...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GPGPGPALLQFRSWWASNRSSRA*SRCRSS
Trigger: GGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCG...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 90 bp GTCCGCAGAGGCTGCAGTGAGATGGGACTCCCACCCCATGCTCCGTaGTCAAGCTGCAGAGGAAAGCAAGCTCCCTCCTGGGCCTATCCT +
Preference number: 5 (lower is better)
Translates to: VRRGCSEMGLPPHAP*SSCRGKQAPSWAYP
Trigger: AGGATAGGCCCAGGAGGGAGCTTGCTTTCCTCTGCAGCTTGAGCACGGAGCATGGGGTGGGAGTCCCATCTCACTGCAGCCTCTGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582155.5
CDS-3UTR CAA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTACAGGCCTTTCGTCTaGGGTCAGAGTGTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: SGHFHSTRVELSQPVPASYRPFV*GQSVPP
Trigger: AGGCGGGACACTCTGACCCAAGACGAAAGGCCTGTA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTGGGCCTGTCACATCTaGGAGGCCACTGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFWACHI*EATGTL
Trigger: GAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSKSPVR*VEPKVE
Trigger: CTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTT...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTGGGCCTGCTGTGTCATaGGCTGTGCCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSGPAVS*AVPLSW
Trigger: CCAGCTCAATGGCACAGCCAATGACACAGCAGGCCC...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCGCACTGGGTGCCATGTaGTATGTGTGGTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFALGAM*YVWLWP
Trigger: GGGCCACAACCACACATACAACATGGCACCCAGTGC...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTCCTTGCTGCCTTTCTaGAGGGCACTGGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSSLLPF*RALGGG
Trigger: GCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGA...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGCCGCCATCTTGTTCTaGCCCCGGCGCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVAAILF*PRRRMS
Trigger: AGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGC...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPRSSRA*SRCRSS
Trigger: GGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 90 bp CTCCTTGCTGCCTTTCTTGAGGGCACTGGGTGGTGGCAGGTCGGCTaGGTCCAGGGCACTGGGTGCCATGTTGTATGTGTGGTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLAAFLEGTGWWQVG*VQGTGCHVVCVVVA
Trigger: GGCCACAACCACACATACAACATGGCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 90 bp CGCAGGAACTCCACTTTCTCCCGCAGCAGCCGGGCTTTGTCACGCTaGAGGTCCTCCACATCACGCTCCAGATTCAGGATGGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRNSTFSRSSRALSR*RSSTSRSRFRMVSS
Trigger: GCTGGACACCATCCTGAATCTGGAGCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCGGGAGAAAGTGGAGTTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 90 bp TCTCGCAGCCGCCCAAACACCTCCTGGTACAGGCTCTGGACCTTCTaGTTCATCTGTCGCAGGGAGCGCAGGAACTCCACTTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SRSRPNTSWYRLWTF*FICRRERRNSTFSR
Trigger: GCGGGAGAAAGTGGAGTTCCTGCGCTCCCTGCGACAGATGAAGCAGAAGGTCCAGAGCCTGTACCAGGAGGTGTTTGGGCGGCTGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 90 bp TCACATCTTGGAGGCCACTGGAACTCTCGAGGGCGAGGCCTGAGTTaGGCTGACTGCCAGAGACAGACCCCTCTGGGTCTCGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: SHLGGHWNSRGRGLS*ADCQRQTPLGLGEP
Trigger: TGGTTCACCGAGACCCAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 90 bp TTTCTCGCACCCCGTTGTCTGGGCCTGTCACATCTTGGAGGCCACTaGAACTCTCGAGGGCGAGGCCTGAGTTGGGCTGACTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FLAPRCLGLSHLGGH*NSRGRGLSWADCQR
Trigger: TCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTTCCCCAGGCTCACTTTCTCCGGTCC +
Preference number: 5 (lower is better)
Translates to: PGPGPGPALLQFRSW*ASNPLLPQAHFLRS
Trigger: GGACCGGAGAAAGTGAGCCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTTCTTCCCCAGGCTCACTTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: GPGPGPGPALLQFRS*WASNPLLPQAHFLR
Trigger: CCGGAGAAAGTGAGCCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCTTTCTCGCACCCCGTaGTCTGGGCCTGTCACATCT +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSLSRTP*SGPVTS
Trigger: AGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGALRLVE*LGANGS
Trigger: GCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCGAGCCGAAGGTGGAGTaGAGGCTGGTAGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFEPKVE*RLVELL
Trigger: CAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTC...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFKSPVR*VEPKVE
Trigger: CTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCGGGCCTGCTGTGTCATaGGCTGTGCCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGPGPALLQFRSWWASNPGPAVS*AVPLSW
Trigger: CCAGCTCAATGGCACAGCCAATGACACAGCAGGCCC...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTCCCGGCTCATCTGCTaGTCCAGGAAGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPSRLIC*SRKSAC
Trigger: GCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGA...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCACTTTCTCCGGTCCTTaGGCTTCCTCTCCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPTFSGP*ASSPAA
Trigger: GGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGT...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTCCCCTCTGTCGGCCTTaGCTCCACATAGCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSPLCRP*LHIAPL
Trigger: TAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGG...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCATCTCAAAGCCAGTGTaGGGGCCCAGTGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFISKPV*GPSGSI
Trigger: AATGGAGCCACTGGGCCCCAACACTGGCTTTGAGAT...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 90 bp TTCACCGAATCCCTGCTCCGTTTCGCTTTCTCGCACCCCGTTGTCTaGGCCTGTCACATCTTGGAGGCCACTGGAACTCTCGAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: FTESLLRFAFSHPVV*ACHILEATGTLEGE
Trigger: CTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTACAGGCCTTTCGTCTaGGGTCAGAGTGTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: PGPGPALLQFRSWWASNPYRPFV*GQSVPP
Trigger: AGGCGGGACACTCTGACCCAAGACGAAAGGCCTGTA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATACAGGCCTTTCGTCTaGGGTCAGAGTGTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAYRPFV*GQSVPP
Trigger: AGGCGGGACACTCTGACCCAAGACGAAAGGCCTGTA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTGGGCCTGTCACATCTaGGAGGCCACTGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPWACHI*EATGTL
Trigger: GAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCA...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCACTTTCTCGCACCCCGTaGTCTGGGCCTGTCACATCT +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGALSRTP*SGPVTS
Trigger: AGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAG...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVLRLVE*LGANGS
Trigger: GCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVLRLVE*LGANGS
Trigger: GCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPKSPVR*VEPKVE
Trigger: CTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGGGCCTGCTGTGTCATaGGCTGTGCCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QPFSSFGLGGLQTPFFPRGPAVS*AVPLSW
Trigger: CCAGCTCAATGGCACAGCCAATGACACAGCAGGCCC...CCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTATGTTGTATGTGTGGTaGTGGCCCACGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GPGPGPGPALLQFRSWWAMLYVW*WPTCSR
Trigger: CCTGGAGCACGTGGGCCACAACCACACATACAACAT...AGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGCACTGGGTGCCATGTaGTATGTGTGGTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPALGAM*YVWLWP
Trigger: GGGCCACAACCACACATACAACATGGCACCCAGTGC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCCTTGCTGCCTTTCTaGAGGGCACTGGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVSLLPF*RALGGG
Trigger: GCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCCCGGCTCATCTGCTaGTCCAGGAAGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVSRLIC*SRKSAC
Trigger: GCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACTCCCGGCTCATCTGCTaGTCCAGGAAGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: GPGPGPALLQFRSWWASNSRLIC*SRKSAC
Trigger: GCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGA...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTCCCGGCTCATCTGCTaGTCCAGGAAGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVSRLIC*SRKSAC
Trigger: GCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAGCCGCCATCTTGTTCTaGCCCCGGCGCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAAAILF*PRRRMS
Trigger: AGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGC...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGCCGCCATCTTGTTCTaGCCCCGGCGCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTAAILF*PRRRMS
Trigger: AGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGACTTTCTCCGGTCCTTaGGCTTCCTCTCCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVTFSGP*ASSPAA
Trigger: GGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACACTTTCTCCGGTCCTTaGGCTTCCTCTCCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: GPGPGPALLQFRSWWASNTFSGP*ASSPAA
Trigger: GGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGT...GTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCCCCCTCTGTCGGCCTTaGCTCCACATAGCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPPLCRP*LHIAPL
Trigger: TAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGG...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
60% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTATCTCAAAGCCAGTGTaGGGGCCCAGTGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSISKPV*GPSGSI
Trigger: AATGGAGCCACTGGGCCCCAACACTGGCTTTGAGAT...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS TCA 90 bp TCTGCGCCGCCATCTTGTTCTTGCCCCGGCGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCACTCAACTGGTATTTGGACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: SAPPSCSCPGAGCLG*GSAGLHSTGIWTAV
Trigger: AACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 90 bp GGCATGAGAGCTGAGCTGGATCCTGGTAGCTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGCCCACAGCACCCTCGGCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: GMRAELDPGSSCGRT*NTQAGSPQHPRPLP
Trigger: TGGAAGAGGCCGAGGGTGCTGTGGGCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGAGCTACCAGGATCCAGCTCAGCTCTCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTGGGCCTGTCACATCTaGGAGGCCACTGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVWACHI*EATGTL
Trigger: GAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTTTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: PGPALLQFRSWWASNPLLLRLVE*LGANGS
Trigger: GCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAA...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPLRLVE*LGANGS
Trigger: GCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGAGCCGAAGGTGGAGTaGAGGCTGGTAGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAEPKVE*RLVELL
Trigger: CAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSKSPVR*VEPKVE
Trigger: CTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTT...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGGGCCTGCTGTGTCATaGGCTGTGCCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFGPAVS*AVPLSW
Trigger: CCAGCTCAATGGCACAGCCAATGACACAGCAGGCCC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCAGGGCCTGCTGTGTCATaGGCTGTGCCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPGPAVS*AVPLSW
Trigger: CCAGCTCAATGGCACAGCCAATGACACAGCAGGCCC...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAATGTTGTATGTGTGGTaGTGGCCCACGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGPGPGPALLQFRSWWASMLYVW*WPTCSR
Trigger: CCTGGAGCACGTGGGCCACAACCACACATACAACAT...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCATGTTGTATGTGTGGTaGTGGCCCACGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGPGPALLQFRSWWASNPMLYVW*WPTCSR
Trigger: CCTGGAGCACGTGGGCCACAACCACACATACAACAT...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGCACTGGGTGCCATGTaGTATGTGTGGTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVALGAM*YVWLWP
Trigger: GGGCCACAACCACACATACAACATGGCACCCAGTGC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCTCCTTGCTGCCTTTCTaGAGGGCACTGGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFSLLPF*RALGGG
Trigger: GCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGA...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GCTGTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTTTCTGCGCCGCCATCTaGTTCTTGCCCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: AVATWDHVTLSCSLYPLTFCAAI*FLPRRR
Trigger: CCGGCGCCGGGGCAAGAACAAGATGGCGGCGCAGAA...AGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTACTTTCTCCGGTCCTTaGGCTTCCTCTCCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: PGPALLQFRSWWASNPLLTFSGP*ASSPAA
Trigger: GGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGT...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAATCTCAAAGCCAGTGTaGGGGCCCAGTGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAISKPV*GPSGSI
Trigger: AATGGAGCCACTGGGCCCCAACACTGGCTTTGAGAT...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCTACAGGCCTTTCGTCTaGGGTCAGAGTGTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSYRPFV*GQSVPP
Trigger: AGGCGGGACACTCTGACCCAAGACGAAAGGCCTGTA...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTGAGCCGAAGGTGGAGTaGAGGCTGGTAGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVEPKVE*RLVELL
Trigger: CAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTC...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAGGGCCTGCTGTGTCATaGGCTGTGCCATTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAGPAVS*AVPLSW
Trigger: CCAGCTCAATGGCACAGCCAATGACACAGCAGGCCC...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGATGTTGTATGTGTGGTaGTGGCCCACGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVMLYVW*WPTCSR
Trigger: CCTGGAGCACGTGGGCCACAACCACACATACAACAT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCGCACTGGGTGCCATGTaGTATGTGTGGTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSALGAM*YVWLWP
Trigger: GGGCCACAACCACACATACAACATGGCACCCAGTGC...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGCACTGGGTGCCATGTaGTATGTGTGGTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFALGAM*YVWLWP
Trigger: GGGCCACAACCACACATACAACATGGCACCCAGTGC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTTGGACAGCAGTTCATaGAACTCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PGPGPALLQFRSWWASNPLDSSS*NSSTGR
Trigger: CCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLRSSRA*SRCRSS
Trigger: GGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCT +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVSPVSV*VGFKPP
Trigger: AGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCT +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVSPVSV*VGFKPP
Trigger: AGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCACCCCTCTGTCGGCCTTaGCTCCACATAGCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPPLCRP*LHIAPL
Trigger: TAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGG...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCATGACATGCGTGATGTaGGGGCTGTTGCAACATGGG +
Preference number: 5 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFMTCVM*GLLQHG
Trigger: CCCATGTTGCAACAGCCCCAACATCACGCATGTCAT...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS TCA 90 bp GGTTGTGGAACTGGGTCTGAGTATAGGCAGAACTGGGCCCCAGGATaGTCTCCCGGAGTGGGGGAAGCTGTGAGGTCAGGTAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: GCGTGSEYRQNWAPG*SPGVGEAVRSGKYP
Trigger: TGGATACTTACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTGGGGCCCAGTTCTGCCTATACTCAGACCCAGTTCCACAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000584137.5
ENST00000585062.1
ENST00000585291.5
CDS CCA 90 bp CGGCGCCGGATGTCTCGGATGAGGCTCAGCTGGGCTTCACTCAACTaGTATTTGGACAGCAGTTCATTGAACTCCTCCACAGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RRRMSRMRLSWASLN*YLDSSSLNSSTGRL
Trigger: CAACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTGATGGACATGAGATCTaGCCACTGCTGTTCCAAATC +
Preference number: 5 (lower is better)
Translates to: PAVGPGPGPGPALLQFRSDGHEI*PLLFQI
Trigger: GATTTGGAACAGCAGTGGCAAGATCTCATGTCCATC...AGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATTGGACAGCAGTTCATaGAACTCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: TGPGEDGIHMQALMETMGLDSSS*NSSTGR
Trigger: CCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTTGGACAGCAGTTCATaGAACTCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVLDSSS*NSSTGR
Trigger: CCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCT +
Preference number: 5 (lower is better)
Translates to: PGPALLQFRSWWASNPLLSPVSV*VGFKPP
Trigger: AGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGA...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGATGACATGCGTGATGTaGGGGCTGTTGCAACATGGG +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVMTCVM*GLLQHG
Trigger: CCCATGTTGCAACAGCCCCAACATCACGCATGTCAT...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCCATTTACCTCAGTGGTaGGCACCTGGAACCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSHLPQW*APGTCP
Trigger: TGGACAGGTTCCAGGTGCCAACCACTGAGGTAAATG...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAGATGGACATGAGATCTaGCCACTGCTGTTCCAAATC +
Preference number: 5 (lower is better)
Translates to: PGPGPGPALLQFRSWWASDGHEI*PLLFQI
Trigger: GATTTGGAACAGCAGTGGCAAGATCTCATGTCCATC...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGATGGACATGAGATCTaGCCACTGCTGTTCCAAATC +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGADGHEI*PLLFQI
Trigger: GATTTGGAACAGCAGTGGCAAGATCTCATGTCCATC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGATGGACATGAGATCTaGCCACTGCTGTTCCAAATC +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPDGHEI*PLLFQI
Trigger: GATTTGGAACAGCAGTGGCAAGATCTCATGTCCATC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCTGTACAGGATTTCACTaGCTGATGTGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFCTGFH*LMCSLP
Trigger: TGGAAGTGAACACATCAGCAAGTGAAATCCTGTACA...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGAGCCGAAGGTGGAGTaGAGGCTGGTAGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTEPKVE*RLVELL
Trigger: CAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATTGGACAGCAGTTCATaGAACTCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPLDSSS*NSSTGR
Trigger: CCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGGCCGCCATCTTGTTCTaGCCCCGGCGCCGGATGTCT +
Preference number: 5 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEAAILF*PRRRMS
Trigger: AGACATCCGGCGCCGGGGCAAGAACAAGATGGCGGC...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAATCTCAAAGCCAGTGTaGGGGCCCAGTGGCTCCATT +
Preference number: 5 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVAISKPV*GPSGSI
Trigger: AATGGAGCCACTGGGCCCCAACACTGGCTTTGAGAT...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTATGACATGCGTGATGTaGGGGCTGTTGCAACATGGG +
Preference number: 5 (lower is better)
Translates to: PGPALLQFRSWWASNPLLMTCVM*GLLQHG
Trigger: CCCATGTTGCAACAGCCCCAACATCACGCATGTCAT...AAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 90 bp GAGTCTAAGGAAAGGCCTGAGTCAGAGTCAAATTCCTCCTCCAGCTaGGAGGCCTGCACAGGGTTAAAGCCTTCTTCAATGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: ESKERPESESNSSSS*EACTGLKPSSMARS
Trigger: GGACCTGGCCATTGAAGAAGGCTTTAACCCTGTGCAGGCCTCCCAGCTGGAGGAGGAATTTGACTCTGACTCAGGCCTTTCCTTAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 90 bp ATCTTGTTCTTGCCCCGGCGCCGGATGTCTCGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTATTTGGACAGCAGTTCATTGAACTCC +
Preference number: 5 (lower is better)
Translates to: ILFLPRRRMSRMRLS*ASLNWYLDSSSLNS
Trigger: GGAGTTCAATGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGCGCCGGGGCAAGAACAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTAGATCAATATCCTCTTaGGTTAAGTCTCCACTGACT +
Preference number: 5 (lower is better)
Translates to: SGHFHSTRVELSQPVPASRSISS*VKSPLT
Trigger: AGTCAGTGGAGACTTAACCAAAGAGGATATTGATCT...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361665.7
CDS-3UTR CAA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTGATGGACATGAGATCTaGCCACTGCTGTTCCAAATC +
Preference number: 5 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPDGHEI*PLLFQI
Trigger: GATTTGGAACAGCAGTGGCAAGATCTCATGTCCATC...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTATCCCGGCTCATCTGCTaGTCCAGGAAGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLSRLIC*SRKSAC
Trigger: GCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGA...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: QVQVQPFSSFGLGGLQTPGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...GGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCATGACATGCGTGATGTaGGGGCTGTTGCAACATGGG +
Preference number: 5 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTMTCVM*GLLQHG
Trigger: CCCATGTTGCAACAGCCCCAACATCACGCATGTCAT...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTCGAACATTTAGCAGCTTaGAATATTGGGCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: WPLPLHPSGAEPASACLFEHLAA*NIGHLL
Trigger: AAGGAGATGCCCAATATTCAAAGCTGCTAAATGTTC...GAAGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS GCA 90 bp ATGATTTTGTCATTGGTGAAAGGGATCTTCATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGCTTGTCCAGGAAGTCAGCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: MILSLVKGIFMARAR*SSRLICLSRKSACF
Trigger: GAAGCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCATGAAGATCCCTTTCACCAATGACAAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCATGTACAGGATTTCACTaGCTGATGTGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGACTGFH*LMCSLP
Trigger: TGGAAGTGAACACATCAGCAAGTGAAATCCTGTACA...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCTGTACAGGATTTCACTaGCTGATGTGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFCTGFH*LMCSLP
Trigger: TGGAAGTGAACACATCAGCAAGTGAAATCCTGTACA...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATKSPVR*VEPKVE
Trigger: CTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCCTTGCTGCCTTTCTaGAGGGCACTGGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSLLPF*RALGGG
Trigger: GCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCCCGGCTCATCTGCTaGTCCAGGAAGTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSRLIC*SRKSAC
Trigger: GCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CAA 90 bp TCTGGCCACTTCCACTCCACCCGAGTGGAGCTGAGCCAGCCAGTGCCTGCCTCTTTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: SGHFHSTRVELSQPVPASLMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...AGAGGCAGGCACTGGCTGGCTCAGCTCCACTCGGGTGGAGTGGAAGTGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGAGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: TGPGEDGIHMQALMETMGGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGACTTTCTCCGGTCCTTaGGCTTCCTCTCCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: TWPMISKSSPSGMSKCKETFSGP*ASSPAA
Trigger: GGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGT...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCACTTTCTCCGGTCCTTaGGCTTCCTCTCCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATTFSGP*ASSPAA
Trigger: GGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTACCCCTCTGTCGGCCTTaGCTCCACATAGCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLPLCRP*LHIAPL
Trigger: TAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGG...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAGATCTATGTCCTCTTaGGTTAAGTCTCCACTGACT +
Preference number: 5 (lower is better)
Translates to: PGPGPGPALLQFRSWWASRSMSS*VKSPLT
Trigger: AGTCAGTGGAGACTTAACCAAAGAGGACATAGATCT...TGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000362042.8
ENST00000585291.5
CDS GCA 90 bp AAGAGGAAGAGGAGGAGGAAGAAGAGGAAGAACTGCCTTCAGAGCTaGTTAGGGAAGAAGGGCTATGGCTCGAGTCTAAGGAAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: KRKRRRKKRKNCLQS*LGKKGYGSSLRKGL
Trigger: CAGGCCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTTCCTCCTCCTCTTCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTGGGCCTGTCACATCTaGGAGGCCACTGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATWACHI*EATGTL
Trigger: GAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGCTTTCTCGCACCCCGTaGTCTGGGCCTGTCACATCT +
Preference number: 5 (lower is better)
Translates to: TWPMISKSSPSGMSKCKELSRTP*SGPVTS
Trigger: AGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAG...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCGCACTGGGTGCCATGTaGTATGTGTGGTTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATALGAM*YVWLWP
Trigger: GGGCCACAACCACACATACAACATGGCACCCAGTGC...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCCCCCTCTGTCGGCCTTaGCTCCACATAGCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATPLCRP*LHIAPL
Trigger: TAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGG...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CAA 90 bp TGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGTGTTCACTCTACCCTTaGACTCTAAATCTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: CRSRSRSRSSPSPVSVLVCSLYP*TLNLKA
Trigger: GGCTTTGAGATTTAGAGTCAAAGGGTAGAGTGAACA...CACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCGAACATTTAGCAGCTTaGAATATTGGGCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: SRSRSRSSPSPVSVLVGFEHLAA*NIGHLL
Trigger: AAGGAGATGCCCAATATTCAAAGCTGCTAAATGTTC...GAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CATGCAGGCTCTGATGGAGACAATGGGAGCCTCAGCTCAGGGGTGGCTGGAGCAGAACATTTAGCAGCTTaGAATATTGGGCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: HAGSDGDNGSLSSGVAGAEHLAA*NIGHLL
Trigger: AAGGAGATGCCCAATATTCAAAGCTGCTAAATGTTC...TGCTCCAGCCACCCCTGAGCTGAGGCTCCCATTGTCTCCATCAGAGCCTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTAGATCTATGTCCTCTTaGGTTAAGTCTCCACTGACT +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVRSMSS*VKSPLT
Trigger: AGTCAGTGGAGACTTAACCAAAGAGGACATAGATCT...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp AGAAGGCATTTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTAGATCTATGTCCTCTTaGGTTAAGTCTCCACTGACT +
Preference number: 5 (lower is better)
Translates to: RRHLSPRCRSRSRSRSSPRSMSS*VKSPLT
Trigger: AGTCAGTGGAGACTTAACCAAAGAGGACATAGATCT...AGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAAATGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357480.9
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATCTTCAGAGAAAGCATaGTTTCTCCACAGTCCACAT +
Preference number: 5 (lower is better)
Translates to: TGPGEDGIHMQALMETMGSSEKA*FLHSPH
Trigger: ATGTGGACTGTGGAGAAACAATGCTTTCTCTGAAGA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585291.5
CDS TCA 90 bp AATGGTGACTCTGTCCCGGTCAGAAGAGGAGACAAGAGGTTGTTTTaGAGAGCAGGGGGCTCACTCTCACTAGGCACTGCTTCTGTTATG +
Preference number: 5 (lower is better)
Translates to: NGDSVPVRRGDKRLF*RAGGSLSLGTASVM
Trigger: CATAACAGAAGCAGTGCCTAGTGAGAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTGTCTCCTCTTCTGACCGGGACAGAGTCACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000577431.1
ENST00000580037.1
ENST00000582155.5
ENST00000583210.5
ENST00000583378.5
ENST00000584634.5
ENST00000585291.5
CDS GCA 90 bp AAGCAGAGGAAGAAGAGGAAGAGGAGGAGGAAGAAGAGGAAGAACTaGCTTCAGAGCTGCTTAGGGAAGAAGGGCTATGGCTCGAGTCTA +
Preference number: 5 (lower is better)
Translates to: KQRKKRKRRRKKRKN*LQSCLGKKGYGSSL
Trigger: TAGACTCGAGCCATAGCCCTTCTTCCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTCTTCCTCCTCCTCTTCCTCTTCTTCCTCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 90 bp GAAGAGGAAGAACTGCCTTCAGAGCTGCTTAGGGAAGAAGGGCTATaGCTCGAGTCTAAGGAAAGGCCTGAGTCAGAGTCAAATTCCTCC +
Preference number: 5 (lower is better)
Translates to: EEEELPSELLREEGL*LESKERPESESNSS
Trigger: GGAGGAATTTGACTCTGACTCAGGCCTTTCCTTAGACTCGAGCCATAGCCCTTCTTCCCTAAGCAGCTCTGAAGGCAGTTCTTCCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp AACACAAACACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGTGTACAGGATTTCACTaGCTGATGTGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: NTNTGPGEDGIHMQALMECTGFH*LMCSLP
Trigger: TGGAAGTGAACACATCAGCAAGTGAAATCCTGTACA...CTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGTGTTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATGTACAGGATTTCACTaGCTGATGTGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPCTGFH*LMCSLP
Trigger: TGGAAGTGAACACATCAGCAAGTGAAATCCTGTACA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCTGTACAGGATTTCACTaGCTGATGTGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSCTGFH*LMCSLP
Trigger: TGGAAGTGAACACATCAGCAAGTGAAATCCTGTACA...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCGAGCCGAAGGTGGAGTaGAGGCTGGTAGAATTGCTG +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATEPKVE*RLVELL
Trigger: CAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTC...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCATGTTGTATGTGTGGTaGTGGCCCACGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATMLYVW*WPTCSR
Trigger: CCTGGAGCACGTGGGCCACAACCACACATACAACAT...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CAA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGATGTTGTATGTGTGGTaGTGGCCCACGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TWPMISKSSPSGMSKCKEMLYVW*WPTCSR
Trigger: CCTGGAGCACGTGGGCCACAACCACACATACAACAT...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCTTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: PGPGPALLQFRSWWASNPLMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...GGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp GCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCAACATGGGACCACGTGACCGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: AVNDMRDVGAVATWDHVTGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...GGTCACGTGGTCCCATGTTGCAACAGCCCCAACATCACGCATGTCATTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCT +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATSPVSV*VGFKPP
Trigger: AGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp ACATGGCCAATGATATCCAAGAGCTCCCCTTCAGGGATGTCAAAATGCAAGGAGTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCT +
Preference number: 5 (lower is better)
Translates to: TWPMISKSSPSGMSKCKESPVSV*VGFKPP
Trigger: AGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGA...CTCCTTGCATTTTGACATCCCTGAAGGGGAGCTCTTGGATATCATTGGCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCCCCATGTTCACTCTACCCTTaGACTCTAAATCTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SSPSPVSVLVGFKPPSSPCSLYP*TLNLKA
Trigger: GGCTTTGAGATTTAGAGTCAAAGGGTAGAGTGAACA...TGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp ACCGGACCAGGGGAGGACGGCATACACATGCAGGCTCTGATGGAGACAATGGGATTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: TGPGEDGIHMQALMETMGLMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...TCCCATTGTCTCCATCAGAGCCTGCATGTGTATGCCGTCCTCCCCTGGTCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp TTAAGTCCCCGCTGTAGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: LSPRCRSRSRSRSSPSPVLMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...AACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCTACAGCGGGGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTTGGACAGCAGTTCATaGAACTCCTCCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATLDSSS*NSSTGR
Trigger: CCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp CAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTGGGCTTCAAACCCCCTTCTTCGAACATTTAGCAGCTTaGAATATTGGGCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: QVQPFSSFGLGGLQTPFFEHLAA*NIGHLL
Trigger: AAGGAGATGCCCAATATTCAAAGCTGCTAAATGTTC...GAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS GCA 90 bp CAAGAGGTTGTTTTGAAGAGCAGGGGGCTCACTCTCACTAGGCACTaGTTCTGTTATGCTGGAAATGTCTGCTGGAAACTCAGCATTCTC +
Preference number: 5 (lower is better)
Translates to: QEVVLKSRGLTLTRH*FCYAGNVCWKLSIL
Trigger: GAGAATGCTGAGTTTCCAGCAGACATTTCCAGCATAACAGAAGCAGTGCCTAGTGAGAGTGAGCCCCCTGCTCTTCAAAACAACCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361665.7
ENST00000362042.8
ENST00000584634.5
CDS GCA 90 bp ACTTCCATGGCCTGCATTTCCATGATGGACATGAGATCTTGCCACTaGTGTTCCAAATCAAATGGTGACTCTGTCCCGGTCAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: TSMACISMMDMRSCH*CSKSNGDSVPVRRG
Trigger: TCCTCTTCTGACCGGGACAGAGTCACCATTTGATTTGGAACAGCAGTGGCAAGATCTCATGTCCATCATGGAAATGCAGGCCATGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000577431.1
ENST00000580037.1
ENST00000582155.5
ENST00000583210.5
ENST00000583378.5
ENST00000584634.5
ENST00000585291.5
CDS GCA 90 bp GTGTTCACTTCCATGGCCTGCATTTCCATGATGGACATGAGATCTTaGCACTGCTGTTCCAAATCAAATGGTGACTCTGTCCCGGTCAGA +
Preference number: 5 (lower is better)
Translates to: VFTSMACISMMDMRS*HCCSKSNGDSVPVR
Trigger: TCTGACCGGGACAGAGTCACCATTTGATTTGGAACAGCAGTGGCAAGATCTCATGTCCATCATGGAAATGCAGGCCATGGAAGTGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000580037.1
ENST00000582155.5
ENST00000583210.5
ENST00000583378.5
ENST00000584634.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TCCATTCCTTCCCCTCTGTCGGCCTTTGCTCCACATAGCTCCTCTACCTCCAGCTTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: SIPSPLSAFAPHSSSTSSLMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...GCTGGAGGTAGAGGAGCTATGTGGAGCAAAGGCCGACAGAGGGGAAGGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp GGGAGATGGAGTGGCAAGGCAGTGAATGACATGCGTGATGTTGGGGCTGTTGCATTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: GRWSGKAVNDMRDVGAVALMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...TGCAACAGCCCCAACATCACGCATGTCATTCACTGCCTTGCCACTCCATCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS-3UTR CAA 90 bp GTTGCAACATGGGACCACGTGACCCTTTCCTGTTCACTCTACCCTTTGACTCTAGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: VATWDHVTLSCSLYPLTLGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...TAGAGTCAAAGGGTAGAGTGAACAGGAAAGGGTCACGTGGTCCCATGTTGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS TCA 90 bp CATGATGGACATGAGATCTTGCCACTGCTGTTCCAAATCAAATGGTaGCTCTGTCCCGGTCAGAAGAGGAGACAAGAGGTTGTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: HDGHEILPLLFQIKW*LCPGQKRRQEVVLK
Trigger: CTTCAAAACAACCTCTTGTCTCCTCTTCTGACCGGGACAGAGTCACCATTTGATTTGGAACAGCAGTGGCAAGATCTCATGTCCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000577431.1
ENST00000580037.1
ENST00000582155.5
ENST00000583210.5
ENST00000583378.5
ENST00000584634.5
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCGGCAGGTTGATGATTTaGTCATTGGTGAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATGRLMI*SLVKGI
Trigger: GATCCCTTTCACCAATGACAAAATCATCAACCTGCC...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS-3UTR CAA 90 bp TTCCTTCCTTCCTTCCTTCTATCCCTCCTTCCTGAAATGAGACTTTCTGCCACCTTGATGATTTTGTCATaGGTGAAAGGGATCTTCATG +
Preference number: 5 (lower is better)
Translates to: FLPSFLLSLLPEMRLSATLMILS*VKGIFM
Trigger: CATGAAGATCCCTTTCACCAATGACAAAATCATCAA...GGTGGCAGAAAGTCTCATTTCAGGAAGGAGGGATAGAAGGAAGGAAGGAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000581319.1
ENST00000585291.5
CDS TCA 72 bp GCCGCCGGGCCTGCTGGTCGGCCATCGTGCGGGGGATaGGGAGGACACTGCCGTCCCCGGCGTACTGGAGCG +
Preference number: 6 (lower is better)
Translates to: AAGPAGRPSCGG*GGHCRPRRTGA
Trigger: CGCTCCAGTACGCCGGGGACGGCAGTGTCCTCCTCATCCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 72 bp GAGAGCTGCGGTCCAGGCGGGTCATGGTCTGCGAGATaGGCCCCAGGGCAGCCGGTGCCGGGAAGCCGGACA +
Preference number: 6 (lower is better)
Translates to: ESCGPGGSWSAR*APGQPVPGSRT
Trigger: TGTCCGGCTTCCCGGCACCGGCTGCCCTGGGGCTCATCTCGCAGACCATGACCCGCCTGGACCGCAGCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536222.5
ENST00000577431.1
ENST00000579537.5
ENST00000580050.1
CDS CAA 90 bp GGGCAGCCGGTGCCGGGAAGCCGGACAGGGGGCTGCAAGGAGCTCTaGGCTTTCAGGGAGCACACCAGGCTGGAAGGGTGGCCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: GQPVPGSRTGGCKEL*AFREHTRLEGWPLA
Trigger: AGCAAGGGGCCACCCTTCCAGCCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCACCGGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536222.5
CDS CAA 90 bp GGGCAGCCGGTGCCGGGAAGCCGGACAGGGGGCTGCAAGGAGCTCTaGGCTTTCAGGGAGCACACCAGGCTAGGCTGCAGCAGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: GQPVPGSRTGGCKEL*AFREHTRLGCSREP
Trigger: TGGCTCCCTGCTGCAGCCTAGCCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCACCGGCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580050.1
CDS GCA 72 bp CTCCGGTCCTTTGGCTTCCTCTCCTGCCGCCGGGCCTaGTGGTCGGCCATCGTGCGGGGGATGAGGAGGACA +
Preference number: 6 (lower is better)
Translates to: LRSFGFLSCRRA*WSAIVRGMRRT
Trigger: TGTCCTCCTCATCCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 72 bp CAGGCTCACTTTCTCCGGTCCTTTGGCTTCCTCTCCTaGCGCCGGGCCTGCTGGTCGGCCATCGTGCGGGGG +
Preference number: 6 (lower is better)
Translates to: QAHFLRSFGFLS*RRACWSAIVRG
Trigger: CCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGTGAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 72 bp CCAGGGCAGCCGGTGCCGGGAAGCCGGACAGGGGGCTaGAAGGAGCTCTTGGCTTTCAGGGAGCACACCAGG +
Preference number: 6 (lower is better)
Translates to: PGQPVPGSRTGG*KELLAFREHTR
Trigger: CCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCACCGGCTGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536222.5
ENST00000577431.1
ENST00000579537.5
ENST00000580050.1
CDS CCA 72 bp CGGTCCTTTGGCTTCCTCTCCTGCCGCCGGGCCTGCTaGTCGGCCATCGTGCGGGGGATGAGGAGGACACTG +
Preference number: 6 (lower is better)
Translates to: RSFGFLSCRRAC*SAIVRGMRRTL
Trigger: CAGTGTCCTCCTCATCCCCCGCACGATGGCCGACCAGCAGGCCCGGCGGCAGGAGAGGAAGCCAAAGGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp GGGCAGCCGGTGCCGGGAAGCCGGACAGGGGGCTGCAAGGAGCTCTaGGCTTTCAGGGAGCACACCAGGCTAGCTGCAGACGGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: GQPVPGSRTGGCKEL*AFREHTRLAADGSQ
Trigger: TTGGCTCCCGTCTGCAGCTAGCCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCACCGGCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579537.5
CDS GCA 72 bp CCCGGATACCCGAGTCCGGCTGAGACCAAGTCGCCATaGCCACTCTCGGCGCCGGAGCTTCTAGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PGYPSPAETKSP*PLSAPELLASR
Trigger: CCTGGAGGCTAGAAGCTCCGGCGCCGAGAGTGGGCATGGCGACTTGGTCTCAGCCGGACTCGGGTATCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579481.1
CDS CAA 72 bp GTGCCGGGAAGCCGGACAGGGGGCTGCAAGGAGCTCTaGGCTTTCAGGGAGCACACCAGGCTGGAAGGGTGG +
Preference number: 6 (lower is better)
Translates to: VPGSRTGGCKEL*AFREHTRLEGW
Trigger: CCACCCTTCCAGCCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536222.5
CDS CAA 72 bp GTGCCGGGAAGCCGGACAGGGGGCTGCAAGGAGCTCTaGGCTTTCAGGGAGCACACCAGGCTAGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: VPGSRTGGCKEL*AFREHTRLGCS
Trigger: GCTGCAGCCTAGCCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580050.1
CDS TCA 72 bp TTCCAGAGAAACCCTGCCCGGATACCCGAGTCCGGCTaGGACCAAGTCGCCATGCCCACTCTCGGCGCCGGA +
Preference number: 6 (lower is better)
Translates to: FQRNPARIPESG*DQVAMPTLGAG
Trigger: TCCGGCGCCGAGAGTGGGCATGGCGACTTGGTCTCAGCCGGACTCGGGTATCCGGGCAGGGTTTCTCTGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579481.1
CDS GCA 72 bp CAGAGAAACCCGAGTCCGGCTGAGACCAAGTCGCCATaGCCACTCTCGGCGCCGGAGCTTCTAGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: QRNPSPAETKSP*PLSAPELLASR
Trigger: CCTGGAGGCTAGAAGCTCCGGCGCCGAGAGTGGGCATGGCGACTTGGTCTCAGCCGGACTCGGGTTTCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361665.7
ENST00000585062.1
CDS CCA 72 bp GGAGGCCACTGGAACTCTCGAGGGCGAGGCCTGAGTTaGGCTGACTGCCAGAGACAGACCCCTCTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: GGHWNSRGRGLS*ADCQRQTPLGL
Trigger: GAGACCCAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 72 bp CACTGCCGTCCCCGGCGTACTGGAGCGCATACTGACTaGGCGAGTAGGGTCGTCCGTTCTCATCTCGCAGCC +
Preference number: 6 (lower is better)
Translates to: HCRPRRTGAHTD*ASRVVRSHLAA
Trigger: GGCTGCGAGATGAGAACGGACGACCCTACTCGCCCAGTCAGTATGCGCTCCAGTACGCCGGGGACGGCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 72 bp CTCTTGGCTTTCAGGGAGCACACCAGGCTGGAAGGGTaGCCCCTTGCTAGCTCCGAGGGGCCTGAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: LLAFREHTRLEG*PLASSEGPEEG
Trigger: ACCCTCCTCAGGCCCCTCGGAGCTAGCAAGGGGCCACCCTTCCAGCCTGGTGTGCTCCCTGAAAGCCAAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536222.5
CDS CAA 72 bp GTGCCGGGAAGCCGGACAGGGGGCTGCAAGGAGCTCTaGGCTTTCAGGGAGCACACCAGGCTAGCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: VPGSRTGGCKEL*AFREHTRLAAD
Trigger: GTCTGCAGCTAGCCTGGTGTGCTCCCTGAAAGCCAAGAGCTCCTTGCAGCCCCCTGTCCGGCTTCCCGGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579537.5
CDS TCA 72 bp GGGCCCCAGGATGATCTCCCGGAGTGGGGGAAGCTGTaGGGTCAGGTAAGTATCCACGTCCACCCGTACCCC +
Preference number: 6 (lower is better)
Translates to: GPQDDLPEWGKL*GQVSIHVHPYP
Trigger: GGGGTACGGGTGGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTGGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000584137.5
ENST00000585062.1
ENST00000585291.5
CDS CCA 72 bp CCCCGTTGTCTGGGCCTGTCACATCTTGGAGGCCACTaGAACTCTCGAGGGCGAGGCCTGAGTTGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: PRCLGLSHLGGH*NSRGRGLSWAD
Trigger: GTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCAGACAACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 72 bp GCTGCAGACGGGAGCCAATCTCTGCATCAGGGCAGCTaGAGAAGCTGCCGCAAGGAACCAGCCCATCCCTGG +
Preference number: 6 (lower is better)
Translates to: AADGSQSLHQGS*RSCRKEPAHPW
Trigger: CCAGGGATGGGCTGGTTCCTTGCGGCAGCTTCTCCAGCTGCCCTGATGCAGAGATTGGCTCCCGTCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579537.5
ENST00000583210.5
CDS CAA 90 bp CCTGTCAGGTTGGTGGAGCCGAAGGTGGAGTTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGCAGCGTGGAGCTACTGGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: PVRLVEPKVELRLVE*LGANGSSVELLATG
Trigger: GCCTGTGGCCAGTAGCTCCACGCTGCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTCCACCAACCTGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp CGCAGGGAGCGCAGGAACTCCACTTTCTCCCGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCCACATCACGCTCCAGATTCAGGATG +
Preference number: 6 (lower is better)
Translates to: RRERRNSTFSRSSRA*SRCRSSTSRSRFRM
Trigger: CATCCTGAATCTGGAGCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCGGGAGAAAGTGGAGTTCCTGCGCTCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 72 bp TGGAACTCTCGAGGGCGAGGCCTGAGTTGGGCTGACTaGCAGAGACAGACCCCTCTGGGTCTCGGTGAACCA +
Preference number: 6 (lower is better)
Translates to: WNSRGRGLSWAD*QRQTPLGLGEP
Trigger: TGGTTCACCGAGACCCAGAGGGGTCTGTCTCTGGCAGTCAGCCCAACTCAGGCCTCGCCCTCGAGAGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 72 bp CTTTCTCGCACCCCGTTGTCTGGGCCTGTCACATCTTaGAGGCCACTGGAACTCTCGAGGGCGAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LSRTPLSGPVTS*RPLELSRARPE
Trigger: CTCAGGCCTCGCCCTCGAGAGTTCCAGTGGCCTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 72 bp CACTGGGTGGTGGCAGGTCGGCTGAGTCCAGGGCACTaGGTGCCATGTTGTATGTGTGGTTGTGGCCCACGT +
Preference number: 6 (lower is better)
Translates to: HWVVAGRLSPGH*VPCCMCGCGPR
Trigger: ACGTGGGCCACAACCACACATACAACATGGCACCCAGTGCCCTGGACTCAGCCGACCTGCCACCACCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 72 bp CGCAGGAACTCCACTTTCTCCCGCAGCAGCCGGGCTTaGTCACGCTGCAGGTCCTCCACATCACGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: RRNSTFSRSSRA*SRCRSSTSRSR
Trigger: TCTGGAGCGTGATGTGGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTGCGGGAGAAAGTGGAGTTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 72 bp CTGGGTCTCGGTGAACCAGCCAGGCATTTACCTCAGTaGTTGGCACCTGGAACCTGTCCAGGGCCCTCACCT +
Preference number: 6 (lower is better)
Translates to: LGLGEPARHLPQ*LAPGTCPGPSP
Trigger: AGGTGAGGGCCCTGGACAGGTTCCAGGTGCCAACCACTGAGGTAAATGCCTGGCTGGTTCACCGAGACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 72 bp CCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTaGTGGGCTTCAAACCCCCTTCTTCCCCAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: PGPGPALLQFRS*WASNPLLPQAH
Trigger: GTGAGCCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 72 bp GCCCCCAGATCAATATCCGCAGAGGCTGCAGTGAGATaGGACTCCCACCCCATGCTCCGTGCTCAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: APRSISAEAAVR*DSHPMLRAQAA
Trigger: TGCAGCTTGAGCACGGAGCATGGGGTGGGAGTCCCATCTCACTGCAGCCTCTGCGGATATTGATCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583378.5
CDS CAA 72 bp GGTCTCGGTGAACCAGCCAGGCATTTACCTCAGTGGTaGGCACCTGGAACCTGTCCAGGGCCCTCACCTGAC +
Preference number: 6 (lower is better)
Translates to: GLGEPARHLPQW*APGTCPGPSPD
Trigger: GTCAGGTGAGGGCCCTGGACAGGTTCCAGGTGCCAACCACTGAGGTAAATGCCTGGCTGGTTCACCGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CAA 72 bp TTGGTGGAGCCGAAGGTGGAGTTGAGGCTGGTAGAATaGCTGGGGGCCAACGGGAGCAGCGTGGAGCTACTG +
Preference number: 6 (lower is better)
Translates to: LVEPKVELRLVE*LGANGSSVELL
Trigger: CAGTAGCTCCACGCTGCTCCCGTTGGCCCCCAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTCCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp AAAGGGTCAGGCAGCTCTGGGCCTGCTGTGTCATTGGCTGTGCCATaGAGCTGGGGTGGAAAGAAGAGCCCTGTCAGGTTGGTGGAGCCG +
Preference number: 6 (lower is better)
Translates to: KGSGSSGPAVSLAVP*SWGGKKSPVRLVEP
Trigger: CGGCTCCACCAACCTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGCCAATGACACAGCAGGCCCAGAGCTGCCTGACCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp TCATCCCGGCTCATCTGCTTGTCCAGGAAGTCAGCCTGCTTCTCCTaGCTGCCTTTCTTGAGGGCACTGGGTGGTGGCAGGTCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSRLICLSRKSACFS*LPFLRALGGGRSAE
Trigger: CTCAGCCGACCTGCCACCACCCAGTGCCCTCAAGAAAGGCAGCAAGGAGAAGCAGGCTGACTTCCTGGACAAGCAGATGAGCCGGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp AGGTCCAGGTCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCTTCTTCCCCAGGCTCACTTTCTCCG +
Preference number: 6 (lower is better)
Translates to: RSRSRSRSSPSPVSV*VGFKPPSSPGSLSP
Trigger: CGGAGAAAGTGAGCCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGACCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 72 bp ACTGGGTCTGAGTATAGGCAGAACTGGGCCCCAGGATaGTCTCCCGGAGTGGGGGAAGCTGTGAGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: TGSEYRQNWAPG*SPGVGEAVRSG
Trigger: ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTGGGGCCCAGTTCTGCCTATACTCAGACCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000584137.5
ENST00000585062.1
ENST00000585291.5
CDS CCA 72 bp GCTGAGCTGGATCCTGGTAGCTCATGCGGCAGAACTTaGAATACTCAGGCTGGTAGCCCACAGCACCCTCGG +
Preference number: 6 (lower is better)
Translates to: AELDPGSSCGRT*NTQAGSPQHPR
Trigger: CCGAGGGTGCTGTGGGCTACCAGCCTGAGTATTCCAAGTTCTGCCGCATGAGCTACCAGGATCCAGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 72 bp GGCAGCTCTGGGCCTGCTGTGTCATTGGCTGTGCCATaGAGCTGGGGTGGAAAGAAGAGCCCTGTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: GSSGPAVSLAVP*SWGGKKSPVRL
Trigger: CAACCTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGCCAATGACACAGCAGGCCCAGAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 72 bp TCCAGGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTaGGTGGGCTTCAAACCCCCTTCTTCCCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: SRSRSSPSPVSV*VGFKPPSSPGS
Trigger: TGAGCCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp TTGGCTGTGCCATTGAGCTGGGGTGGAAAGAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAGTTGAGGCTGGTAGAATTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LAVPLSWGGKKSPVR*VEPKVELRLVELLG
Trigger: CCCCAGCAATTCTACCAGCCTCAACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGGCACAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 72 bp CCATCTTGTTCTTGCCCCGGCGCCGGATGTCTCGGATaGGGCTCAGCTGGGCTTCACTCAACTGGTATTTGG +
Preference number: 6 (lower is better)
Translates to: PSCSCPGAGCLG*GSAGLHSTGIW
Trigger: CCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGCGCCGGGGCAAGAACAAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 72 bp TTGCCCCGGCGCCGGATGTCTCGGATGAGGCTCAGCTaGGCTTCACTCAACTGGTATTTGGACAGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: LPRRRMSRMRLS*ASLNWYLDSSS
Trigger: TGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCGGCGCCGGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 72 bp GGTCCAGGTCCAGCCCTTCTCCAGTTTCGGTCTTGGTaGGCTTCAAACCCCCTTCTTCCCCAGGCTCACTTT +
Preference number: 6 (lower is better)
Translates to: GPGPALLQFRSW*ASNPLLPQAHF
Trigger: AAAGTGAGCCTGGGGAAGAAGGGGGTTTGAAGCCCACCAAGACCGAAACTGGAGAAGGGCTGGACCTGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 72 bp ACAGCCCCCAAATCCTCCAAATCTTCACCGAATCCCTaGTCCGTTTCGCTTTCTCGCACCCCGTTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: TAPKSSKSSPNP*SVSLSRTPLSG
Trigger: CCCAGACAACGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGATTTGGAGGATTTGGGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000585291.5
CDS CCA 72 bp TCAATCAGATCTATGTCCGCAGAGGCTGCAGTGAGATaGGACTCCCACCCCATGCTCCGTGCTCAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SIRSMSAEAAVR*DSHPMLRAQAA
Trigger: TGCAGCTTGAGCACGGAGCATGGGGTGGGAGTCCCATCTCACTGCAGCCTCTGCGGACATAGATCTGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582155.5
CDS CAA 72 bp CCATTGAGCTGGGGTGGAAAGAAGAGCCCTGTCAGGTaGGTGGAGCCGAAGGTGGAGTTGAGGCTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PLSWGGKKSPVR*VEPKVELRLVE
Trigger: TTCTACCAGCCTCAACTCCACCTTCGGCTCCACCAACCTGACAGGGCTCTTCTTTCCACCCCAGCTCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS GCA 72 bp TCATTGGTGAAAGGGATCTTCATGGCTCGGGCTCGGTaGTCATCCCGGCTCATCTGCTTGTCCAGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: SLVKGIFMARAR*SSRLICLSRKS
Trigger: TGACTTCCTGGACAAGCAGATGAGCCGGGATGAGCACCGAGCCCGAGCCATGAAGATCCCTTTCACCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000581319.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 72 bp CGGATGAGGCTCAGCTGGGCTTCACTCAACTGGTATTaGGACAGCAGTTCATTGAACTCCTCCACAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RMRLSWASLNWY*DSSSLNSSTGR
Trigger: CCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CCA 72 bp TTATTTTCTTTGGCTGGAGCTACAGGCCTTTCGTCTTaGGTCAGAGTGTCCCGCCTCCTCCACACTTACCAG +
Preference number: 6 (lower is better)
Translates to: LFSLAGATGLSS*VRVSRLLHTYQ
Trigger: CTGGTAAGTGTGGAGGAGGCGGGACACTCTGACCCAAGACGAAAGGCCTGTAGCTCCAGCCAAAGAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000579481.1
ENST00000579889.1
ENST00000581441.1
ENST00000582574.1
ENST00000583060.1
ENST00000584137.5
ENST00000585062.1
ENST00000585291.5
ENST00000585299.1
CDS CAA 72 bp GTGGGTCTCCAGGAGGGGCACTGTACAGGATTTCACTaGCTGATGTGTTCACTTCCATGGCCTGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: VGLQEGHCTGFH*LMCSLPWPAFP
Trigger: TGGAAATGCAGGCCATGGAAGTGAACACATCAGCAAGTGAAATCCTGTACAGTGCCCCTCCTGGAGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000580037.1
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 90 bp CGGATGTCTCGGATGAGGCTCAGCTGGGCTTCACTCAACTGGTATTaGGACAGCAGTTCATTGAACTCCTCCACAGGCAGGTTGATGATT +
Preference number: 6 (lower is better)
Translates to: RMSRMRLSWASLNWY*DSSSLNSSTGRLMI
Trigger: AATCATCAACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCTCATCCGAGACATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS CAA 72 bp TTTATTTTCTTTGGCTGGAGCTACAGGCCTTTCGTCTaGGGTCAGAGTGTCCCGCCTCCTCCACACTTACCA +
Preference number: 6 (lower is better)
Translates to: FIFFGWSYRPFV*GQSVPPPPHLP
Trigger: TGGTAAGTGTGGAGGAGGCGGGACACTCTGACCCAAGACGAAAGGCCTGTAGCTCCAGCCAAAGAAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000579481.1
ENST00000579889.1
ENST00000581441.1
ENST00000582574.1
ENST00000583060.1
ENST00000584137.5
ENST00000585062.1
ENST00000585291.5
ENST00000585299.1
CDS CCA 72 bp GGGATTGGACCCCTTAAAACTTGGTTTGGAGGAAGCTaGCCATGGCAAGCAAGAGCGAATTGTCATGCAGAA +
Preference number: 6 (lower is better)
Translates to: GIGPLKTWFGGS*PWQARANCHAE
Trigger: TTCTGCATGACAATTCGCTCTTGCTTGCCATGGCCAGCTTCCTCCAAACCAAGTTTTAAGGGGTCCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580037.1
CDS CAA 90 bp AGGCTCAGCTGGGCTTCACTCAACTGGTATTTGGACAGCAGTTCATaGAACTCCTCCACAGGCAGGTTGATGATTTTGTCATTGGTGAAA +
Preference number: 6 (lower is better)
Translates to: RLSWASLNWYLDSSS*NSSTGRLMILSLVK
Trigger: TTTCACCAATGACAAAATCATCAACCTGCCTGTGGAGGAGTTCAATGAACTGCTGTCCAAATACCAGTTGAGTGAAGCCCAGCTGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000582155.5
ENST00000583378.5
ENST00000585291.5
CDS TCA 72 bp CGTCCACCCGTACCCCAATCAAACTCAGCAGAATGGTaGACTGGAGAAGTCCTTCCGTTAAGTATTTCTTCA +
Preference number: 6 (lower is better)
Translates to: RPPVPQSNSAEW*TGEVLPLSISS
Trigger: TGAAGAAATACTTAACGGAAGGACTTCTCCAGTTCACCATTCTGCTGAGTTTGATTGGGGTACGGGTGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000584137.5
ENST00000585062.1
ENST00000585291.5
CDS GCA 72 bp TCCATGGCCTGCATTTCCATGATGGACATGAGATCTTaGCACTGCTGTTCCAAATCAAATGGTGACTCTGTC +
Preference number: 6 (lower is better)
Translates to: SMACISMMDMRS*HCCSKSNGDSV
Trigger: GACAGAGTCACCATTTGATTTGGAACAGCAGTGGCAAGATCTCATGTCCATCATGGAAATGCAGGCCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357480.9
ENST00000361665.7
ENST00000362042.8
ENST00000536222.5
ENST00000577411.5
ENST00000577431.1
ENST00000580037.1
ENST00000582155.5
ENST00000583210.5
ENST00000583378.5
ENST00000584634.5
ENST00000585291.5