RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000123405

Ensembl transcript IDs: ENST00000312156.8, ENST00000435572.7, ENST00000540264.2, ENST00000553070.5, ENST00000553198.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTaGACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCC +
Preference number: 1 (lower is better)
Translates to: SQGRQIPALPQGKPL*THLGTSKHLLPLSS
Trigger: GGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR CCA 90 bp TCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTaGGGAGTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGC +
Preference number: 1 (lower is better)
Translates to: SSSGLENSAPSGTQG*GVPLSEGNEGNPIS
Trigger: GCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGACCAGAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR CCA 90 bp ACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTaGTCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGT +
Preference number: 1 (lower is better)
Translates to: TPWNFQTLVAIVILF*SRELSSFWDSGLGS
Trigger: ACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR CCA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTaGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCT +
Preference number: 1 (lower is better)
Translates to: TDSSPPSRQASLNTP*NFQTLVAIVILFWS
Trigger: AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR TCA 90 bp AAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCCAAGGCAAGCCTCTTTaGACACACCTTGGAACTTCC +
Preference number: 2 (lower is better)
Translates to: KVEAKDLRSRVREDRFQPQGKPL*THLGTS
Trigger: GGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTG...GGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR-3UTR CCA 90 bp GCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACTCTGGGACTCAGGGTTaGGGAGTACCTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: AESGKTDSSPPSRQASLNSGTQG*GVPLSE
Trigger: TTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGA...GTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR-3UTR CCA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTGAACTCAGCTCCTTCTaGGACTCAGGGTTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: DRFQPSLKASLFEHTLELELSSF*DSGLGS
Trigger: ACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR CCA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCGAACTCAGCTCCTTCTaGGACTCAGGGTTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFELSSF*DSGLGS
Trigger: ACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR CCA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGATTGTCATCCTCTTCTaGTCTAGAGAACTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKIVILF*SRELSS
Trigger: GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAAT...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR-3UTR GCA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCTTCCAAACACTTGTTaGCATTGTCATCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKLPNTC*HCHPLL
Trigger: CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAG...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR-3UTR GCA 90 bp AAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCACTTCCAAACACTTGTTaGCATTGTCATCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: KDLRSRVREDRFQPSLKALPNTC*HCHPLL
Trigger: CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAG...TGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR-3UTR GCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTaGCATTGTCATCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: EDRFQPSLKASLFEHTLELPNTC*HCHPLL
Trigger: CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAG...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR CAA 90 bp AAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCAAGGCAAGCCTCTTaGAACACACCTTGGAACTTC +
Preference number: 3 (lower is better)
Translates to: KVEAKDLRSRVREDRFQPSRQAS*NTPWNF
Trigger: GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGA...GGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR CCA 72 bp GTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCTaGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGG +
Preference number: 3 (lower is better)
Translates to: VILFWSRELSSF*DSGLGSTFIRR
Trigger: CCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR TCA 72 bp AGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTaGACACACCTTGGAACTTCCAAACACTTGTTGCCA +
Preference number: 3 (lower is better)
Translates to: RQIPALPQGKPL*THLGTSKHLLP
Trigger: TGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR CCA 72 bp AGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTaGAACTTCCAAACACTTGTTGCCATTGTCATCCTC +
Preference number: 3 (lower is better)
Translates to: SPPSRQASLNTP*NFQTLVAIVIL
Trigger: GAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR CAA 90 bp GACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAACTCTTTGAACACACCTaGGAACTTCCAAACACTTGT +
Preference number: 3 (lower is better)
Translates to: DQSLDKVEAKDLRSRVRELFEHT*ELPNTC
Trigger: ACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG...TTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
3UTR CCA 72 bp AACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTaGTCTAGAGAACTCAGCTCCTTCTGGGACTCAGGG +
Preference number: 3 (lower is better)
Translates to: NFQTLVAIVILF*SRELSSFWDSG
Trigger: CCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR CAA 90 bp TTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTaGGGGAGTACCTTTATCAGA +
Preference number: 3 (lower is better)
Translates to: FQTLVAIVILFWSRELSSFWDSG*GSTFIR
Trigger: TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAA...GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
3UTR-3UTR CAA 90 bp TCTGTAGCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGACTTCCAAACACTTGTaGCCATTGTCATCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: SVAHFIDQSLDKVEAKDLTSKHL*PLSSSS
Trigger: AGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGT...CAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp CTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCCCTCCCCGCGGGCCCTaGGAAGCCGCTCCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: LRSRVREDRFQPSLKASLPPRGP*EAAPVH
Trigger: ATGAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGG...GAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR GCA 90 bp GCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACCTCCAGGGTCCGGTCTaGCTCCCCGCGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AESGKTDSSPPSRQASLNLQGPV*LPAGPE
Trigger: CTCAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAG...GTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp GACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAACCTCCCCGCGGGCCCTaGGAAGCCGCTCCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: DQSLDKVEAKDLRSRVREPPRGP*EAAPVH
Trigger: ATGAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGG...TTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp CTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCGATCCCGGCTACCTTTaGGAATCTGCGAGGACCGCG +
Preference number: 4 (lower is better)
Translates to: LRSRVREDRFQPSLKASLDPGYL*ESARTA
Trigger: CGCGGTCCTCGCAGATTCTCAAAGGTAGCCGGGATC...GAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR GCA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGACCCTGTTCCTGCTCTaGTGGGGAGGACACGGGGAC +
Preference number: 4 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKTLFLL*WGGHGD
Trigger: GTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGT...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp GTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCGCAGTTCCACCCCTCTaGGCCAGCTCAGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VEAKDLRSRVREDRFQPSAVPPL*ASSVCG
Trigger: GCCACAGACTGAGCTGGCCCAGAGGGGTGGAACTGC...GGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp GTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCGGAGTTGGGCATGAGTaGGTAGGGGTACTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VEAKDLRSRVREDRFQPSGVGHE*VGVLHW
Trigger: CCAGTGGAGTACCCCTACTCACTCATGCCCAACTCC...GGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR GCA 90 bp CTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTCCAGCTTCCTCTTaGGGCAGTTCTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRSRVREDRFQPSLKASLFPASS*GSSGLP
Trigger: TGGCAGCCCAGAACTGCCGCAAGAGGAAGCTGGAAA...GAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR GCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGCTCCAGGGTCCGGTCTaGCTCCCCGCGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLLQGPV*LPAGPE
Trigger: CTCAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAG...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGTTCTTGGGGCTTAGGTaGCCCTGCTGGCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKFLGLR*PCWQPN
Trigger: ATTGGGCTGCCAGCAGGGCCACCTAAGCCCCAAGAA...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGTCAGCTGTTGGCGCATaGCCTCCAGGGTCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGSAVGA*PPGSGL
Trigger: CAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGA...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCCCCCGGGCCATTGCTaGGCGCTGAGTGTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGPPGHC*ALSVEA
Trigger: AGCTTCCACACTCAGCGCTCAGCAATGGCCCGGGGG...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR GCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGACCCTGTTCCTGCTCTaGTGGGGAGGACACGGGGAC +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGTLFLL*WGGHGD
Trigger: GTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGT...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTGGAGCGGCTCACTaGGCAGGCCTGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLELGAAH*AGLRGS
Trigger: TGAGCCTCTCAGGCCTGCTCAGTGAGCCGCTCCAAG...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp ACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGCTTGGAGCGGCTCACTaGGCAGGCCTGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQLLLGLRVGEYLYQKGMLGAAH*AGLRGS
Trigger: TGAGCCTCTCAGGCCTGCTCAGTGAGCCGCTCCAAG...CATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAATGTGGAAGCTCAGGCTaGGCTGAGCACAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLECGSSG*AEHRSP
Trigger: GGGGCTCCTGTGCTCAGCTCAGCCTGAGCTTCCACA...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR GCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAACCCTGTTCCTGCTCTaGTGGGGAGGACACGGGGAC +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRRETLFLL*WGGHGD
Trigger: GTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGT...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGGGCTTAGGTGGCCCTaGTGGCAGCCCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAGLRWP*WQPNVQ
Trigger: CTGGACATTGGGCTGCCAGCAGGGCCACCTAAGCCC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGGGCTTAGGTGGCCCTaGTGGCAGCCCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREGLRWP*WQPNVQ
Trigger: CTGGACATTGGGCTGCCAGCAGGGCCACCTAAGCCC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCACTCCAGGGTCCGGTCTaGCTCCCCGCGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSLQGPV*LPAGPE
Trigger: CTCAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAG...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAATGGAGGTCCAAGGTATaGAGCTGGGGCTTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: DQSLDKVEAKDLRSRVREWRSKV*SWGLGL
Trigger: GAGCCCCAAGCCCCAGCTCCATACCTTGGACCTCCA...TTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGGTTGCCATAGGAGTATaGGGGATCTGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKVAIGV*GIWDMG
Trigger: TCCCATGTCCCAGATCCCCCATACTCCTATGGCAAC...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGCTTAGGTGGCCCTGCTaGCAGCCCAATGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGLRWPC*QPNVQE
Trigger: CTCCTGGACATTGGGCTGCCAGCAGGGCCACCTAAG...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCGATTCTGGGTCTTCTTaGGGCTTAGGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KVEAKDLRSRVREDRFQPDSGSS*GLGGPA
Trigger: AGCAGGGCCACCTAAGCCCCAAGAAGACCCAGAATC...GGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp GCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACGGGGGTCTCAGCAGCTaGCAAGGTATAGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AESGKTDSSPPSRQASLNGGLSS*QGIVGV
Trigger: CACTCCAACTATACCTTGCCAGCTGCTGAGACCCCC...GTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp ACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGCTGTGGCCTCCATCTTaGTCCCCCGGGGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: TQLLLGLRVGEYLYQKGMLWPPS*SPGAQG
Trigger: TCCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAG...CATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGGCCAGCTCAGTCTGTaGCCTCCATCTTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAGQLSL*PPSWSP
Trigger: GGGGGACCAAGATGGAGGCCACAGACTGAGCTGGCC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTGGCCAGCTCAGTCTGTaGCCTCCATCTTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DRFQPSLKASLFEHTLELGQLSL*PPSWSP
Trigger: GGGGGACCAAGATGGAGGCCACAGACTGAGCTGGCC...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGAGAATCTGGGTGGATTaGGCAGGGGCAGTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKRIWVD*AGAVSC
Trigger: ACAACTTACTGCCCCTGCTCAATCCACCCAGATTCT...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCCTCACTGAGCAGGCCTaGGAGGCTCAGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFLTEQA*EAQWLG
Trigger: TCCAAGCCACTGAGCCTCTCAGGCCTGCTCAGTGAG...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCACCTCCCCGCGGGCCCTaGGAAGCCGCTCCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSPPRGP*EAAPVH
Trigger: ATGAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGG...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGTGGAGGCTAAAGACCTaGGGAGCCGAGTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGWRLKT*GAESGK
Trigger: CTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCA...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR GCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGCCATCGGCAGCCTGTTaGAGCGCGTACTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGPSAAC*SAYSSG
Trigger: TCCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGG...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGYWARV*SRFPES
Trigger: GCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTA...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGATGGAGGTCCAAGGTATaGAGCTGGGGCTTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: APSGTQGWGVPLSEGNEGWRSKV*SWGLGL
Trigger: GAGCCCCAAGCCCCAGCTCCATACCTTGGACCTCCA...TCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACGCAGTAAGTTGTGGGTaGTGGAGGTCCAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: AESGKTDSSPPSRQASLNAVSCG*WRSKVW
Trigger: CCATACCTTGGACCTCCACCACCCACAACTTACTGC...GTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGGGGGATCTGGGACATaGGATGTGGATGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREGGSGT*DVDAGS
Trigger: GCTCCCAGCATCCACATCCCATGTCCCAGATCCCCC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCGTTGCCATAGGAGTATaGGGGATCTGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: KVEAKDLRSRVREDRFQPVAIGV*GIWDMG
Trigger: TCCCATGTCCCAGATCCCCCATACTCCTATGGCAAC...GGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp GCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACGCTCCAGCTGCACAATaGTTTCCAGCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AESGKTDSSPPSRQASLNAPAAQ*FPASSC
Trigger: GCAAGAGGAAGCTGGAAACCATTGTGCAGCTGGAGC...GTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp GACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGGGGCACAAGGAAGATaGTCCCATCGGCAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: DQSLDKVEAKDLRSRVREGAQGR*SHRQPV
Trigger: AACAGGCTGCCGATGGGACCATCTTCCTTGTGCCCC...TTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCGGAGTTGGGCATGAGTaGGTAGGGGTACTCCACTGG +
Preference number: 4 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFGVGHE*VGVLHW
Trigger: CCAGTGGAGTACCCCTACTCACTCATGCCCAACTCC...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGTATCACCCTGTTCCTaGTCTGCTGGGGAGGACACG +
Preference number: 4 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAVSPCS*SAGEDT
Trigger: CGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATAC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp ACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGGTATCACCCTGTTCCTaGTCTGCTGGGGAGGACACG +
Preference number: 4 (lower is better)
Translates to: TQLLLGLRVGEYLYQKGMVSPCS*SAGEDT
Trigger: CGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATAC...CATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGTATCACCCTGTTCCTaGTCTGCTGGGGAGGACACG +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREVSPCS*SAGEDT
Trigger: CGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATAC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGACTGCCACCTTGTTTTTaGCCCGTCGTCGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: APSGTQGWGVPLSEGNEGLPPCF*PVVGCP
Trigger: GGGACATCCGACGACGGGGCAAAAACAAGGTGGCAG...TCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCCATCGGCAGCCTGTTaGAGCGCGTACTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGPSAAC*SAYSSG
Trigger: TCCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGG...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp ACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TQLLLGLRVGEYLYQKGMYWARV*SRFPES
Trigger: GCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTA...CATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATACGGGGACATCCTACTaGGCCAGAGTCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNTGTSY*ARVWSR
Trigger: CCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGT...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGTGGGAGCTCATAAGGTaGTGGAGGAAGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGWELIR*WRKWEA
Trigger: GGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCA...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGGGGGATCTGGGACATaGGATGTGGATGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNGGSGT*DVDAGS
Trigger: GCTCCCAGCATCCACATCCCATGTCCCAGATCCCCC...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAAGGGCTAAGGGGTCTTaGAGCGGCTCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SAPSGTQGWGVPLSEGNERAKGS*SGSLSR
Trigger: CCTGCTCAGTGAGCCGCTCCAAGACCCCTTAGCCCT...TTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATAGGGCTAAGGGGTCTTaGAGCGGCTCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNRAKGS*SGSLSR
Trigger: CCTGCTCAGTGAGCCGCTCCAAGACCCCTTAGCCCT...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATCTTAGGTGGCCCTGCTaGCAGCCCAATGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNLRWPC*QPNVQE
Trigger: CTCCTGGACATTGGGCTGCCAGCAGGGCCACCTAAG...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTTTCTTGGGGCTTAGGTaGCCCTGCTGGCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: DRFQPSLKASLFEHTLELFLGLR*PCWQPN
Trigger: ATTGGGCTGCCAGCAGGGCCACCTAAGCCCCAAGAA...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGGATTCTGGGTCTTCTTaGGGCTTAGGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGDSGSS*GLGGPA
Trigger: AGCAGGGCCACCTAAGCCCCAAGAAGACCCAGAATC...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGAGCTCTGTCAGCTGTTaGCGCATGACCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSEGNEGNPISSSTPLGQSSVSC*RMTSRV
Trigger: GACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCT...CTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp ACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAGCTCTGTCAGCTGTTaGCGCATGACCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TQLLLGLRVGEYLYQKGMSSVSC*RMTSRV
Trigger: GACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCT...CATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACCAAGGAGTTGGGCATaGGTGAGTAGGGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLEPRSWA*VSRGTP
Trigger: TGGAGTACCCCTACTCACTCATGCCCAACTCCTTGG...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCTCAGCTGTTGGCGCATaGCCTCCAGGGTCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFSAVGA*PPGSGL
Trigger: CAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGA...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGGCAGTAAGTTGTGGGTaGTGGAGGTCCAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGAVSCG*WRSKVW
Trigger: CCATACCTTGGACCTCCACCACCCACAACTTACTGC...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAAGGGGCAGTAAGTTGTaGGTGGTGGAGGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRRERGSKL*VVEVQG
Trigger: ACCTTGGACCTCCACCACCCACAACTTACTGCCCCT...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAAAGGGGCAGTAAGTTGTaGGTGGTGGAGGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLERGSKL*VVEVQG
Trigger: ACCTTGGACCTCCACCACCCACAACTTACTGCCCCT...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGTGGGAGCTCATAAGGTaGTGGAGGAAGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSEGNEGNPISSSTPLGQWELIR*WRKWEA
Trigger: GGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCA...CTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGGAGTATGGGGGATCTaGGACATGGGATGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAGVWGI*DMGCGC
Trigger: GCATCCACATCCCATGTCCCAGATCCCCCATACTCC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCGGAGTATGGGGGATCTaGGACATGGGATGTGGATGC +
Preference number: 4 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFGVWGI*DMGCGC
Trigger: GCATCCACATCCCATGTCCCAGATCCCCCATACTCC...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGAGGGCTAAGGGGTCTTaGAGCGGCTCACTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLRAKGS*SGSLSR
Trigger: CCTGCTCAGTGAGCCGCTCCAAGACCCCTTAGCCCT...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCGGGGGTCTCAGCAGCTaGCAAGGTATAGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGGGLSS*QGIVGV
Trigger: CACTCCAACTATACCTTGCCAGCTGCTGAGACCCCC...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGAGGGGGTCTCAGCAGCTaGCAAGGTATAGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: APSGTQGWGVPLSEGNEGGGLSS*QGIVGV
Trigger: CACTCCAACTATACCTTGCCAGCTGCTGAGACCCCC...TCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGCGGACTAGCGCTAGCTaGCTCTCTGTCAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLRTSAS*LSVSGY
Trigger: GTACCCGCTGACAGAGAGCCAGCTAGCGCTAGTCCG...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATAGCTCTGTCAGCTGTTaGCGCATGACCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNSSVSC*RMTSRV
Trigger: GACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCT...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGGGCACAAGGAAGATaGTCCCATCGGCAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: SAPSGTQGWGVPLSEGNEGAQGR*SHRQPV
Trigger: AACAGGCTGCCGATGGGACCATCTTCCTTGTGCCCC...TTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCTGTAGCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGCTGTGGCCTCCATCTTaGTCCCCCGGGGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: SVAHFIDQSLDKVEAKDLLWPPS*SPGAQG
Trigger: TCCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAG...CAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGCTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp CACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGCTGTGGCCTCCATCTTaGTCCCCCGGGGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: HLGTSKHLLPLSSSSGLELWPPS*SPGAQG
Trigger: TCCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAG...CTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCGCAGTTCCACCCCTCTaGGCCAGCTCAGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFAVPPL*ASSVCG
Trigger: GCCACAGACTGAGCTGGCCCAGAGGGGTGGAACTGC...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAAGAACTCAGCTCCTTCTaGGACTCAGGGTTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLEELSSF*DSGLGS
Trigger: ACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGAACTCAGCTCCTTCTaGGACTCAGGGTTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREELSSF*DSGLGS
Trigger: ACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCCTCACTGAGCAGGCCTaGGAGGCTCAGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFLTEQA*EAQWLG
Trigger: TCCAAGCCACTGAGCCTCTCAGGCCTGCTCAGTGAG...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTTGGAGCGGCTCACTaGGCAGGCCTGAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSRELGAAH*AGLRGS
Trigger: TGAGCCTCTCAGGCCTGCTCAGTGAGCCGCTCCAAG...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGTCTCTACATATTCGCTaGGCCGCCGACCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLSLHIR*AADQPL
Trigger: CAGAGGCTGGTCGGCGGCGCAGCGAATATGTAGAGA...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGCAGGAGAGTAGCTGTTaGCTGATTCATCCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGQESSC*LIHPEG
Trigger: ACCTTCGGGATGAATCAGGCAACAGCTACTCTCCTG...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCTACCTTTGAGAATCTaGGAGGACCGCGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSLPLRI*EDRAPP
Trigger: GGGCGGGGCGCGGTCCTCGCAGATTCTCAAAGGTAG...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR CCA 90 bp TTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGTATGGAGCTGGGGCTTaGGGCTCAAATGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSEGNEGNPISSSTPLGQYGAGA*GSNDGS
Trigger: TGAGCCATCATTTGAGCCCCAAGCCCCAGCTCCATA...CTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGTAAGTTGTGGGTGGTaGAGGTCCAAGGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREVSCGW*RSKVWS
Trigger: GCTCCATACCTTGGACCTCCACCACCCACAACTTAC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGGCAGTAAGTTGTaGGTGGTGGAGGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRRGSKL*VVEVQG
Trigger: ACCTTGGACCTCCACCACCCACAACTTACTGCCCCT...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAACTGGGACATGGGATGTaGATGCTGGGAGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRRELGHGM*MLGAHK
Trigger: CTTATGAGCTCCCAGCATCCACATCCCATGTCCCAG...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGTTGCCATAGGAGTATaGGGGATCTGGGACATGGGA +
Preference number: 4 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAVAIGV*GIWDMG
Trigger: TCCCATGTCCCAGATCCCCCATACTCCTATGGCAAC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTAGAGGCTCAGTGGCTTaGAGACTGGTATGGCCATGT +
Preference number: 4 (lower is better)
Translates to: DRFQPSLKASLFEHTLELRGSVA*RLVWPC
Trigger: ACATGGCCATACCAGTCTCCAAGCCACTGAGCCTCT...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCAGAGGCTCAGTGGCTTaGAGACTGGTATGGCCATGT +
Preference number: 4 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGRGSVA*RLVWPC
Trigger: ACATGGCCATACCAGTCTCCAAGCCACTGAGCCTCT...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCCTTAGGTGGCCCTGCTaGCAGCCCAATGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFLRWPC*QPNVQE
Trigger: CTCCTGGACATTGGGCTGCCAGCAGGGCCACCTAAG...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGCGGACTAGCGCTAGCTaGCTCTCTGTCAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: HLGTSKHLLPLSSSSGLERTSAS*LSVSGY
Trigger: GTACCCGCTGACAGAGAGCCAGCTAGCGCTAGTCCG...CTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGCTCCAGCTGCACAATaGTTTCCAGCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREAPAAQ*FPASSC
Trigger: GCAAGAGGAAGCTGGAAACCATTGTGCAGCTGGAGC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGTCATCCCGAAGGTGCTaGAAAATGTCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGSSRRC*KMSRYS
Trigger: GCTGTACCGTGACATTTTCCAGCACCTTCGGGATGA...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGGGCACAAGGAAGATaGTCCCATCGGCAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLGAQGR*SHRQPV
Trigger: AACAGGCTGCCGATGGGACCATCTTCCTTGTGCCCC...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTGGCCAGCTCAGTCTGTaGCCTCCATCTTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSGQLSL*PPSWSP
Trigger: GGGGGACCAAGATGGAGGCCACAGACTGAGCTGGCC...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACGCAGTTCCACCCCTCTaGGCCAGCTCAGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LGTSKHLLPLSSSSGLENAVPPL*ASSVCG
Trigger: GCCACAGACTGAGCTGGCCCAGAGGGGTGGAACTGC...GTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACCACCTCGCCAACTATaGCCACAGTCAGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLEPPRQL*PQSVPL
Trigger: CAAAGGAACTGACTGTGGCCATAGTTGGCGAGGTGG...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS-3UTR TCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAAGAATCTGGGTGGATTaGGCAGGGGCAGTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRRERIWVD*AGAVSC
Trigger: ACAACTTACTGCCCCTGCTCAATCCACCCAGATTCT...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp TTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGCAGCATCGCTATAGTTaGGGGATAATCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LSEGNEGNPISSSTPLGQQHRYS*GIILSR
Trigger: CCGACTCAGGATTATCCCTCAACTATAGCGATGCTG...CTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTTCAGCTGTTGGCGCATaGCCTCCAGGGTCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLSAVGA*PPGSGL
Trigger: CAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGA...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGGCTGAGCCTGAGCTaGCACTGCTGGACGAGGATC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSRLSLS*HCWTRI
Trigger: GATCCTCGTCCAGCAGTGTCAGCTCAGGCTCAGCCT...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR GCA 90 bp GCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCGACATGGGATGTGGATaGTGGGAGCTCATAAGGTGG +
Preference number: 4 (lower is better)
Translates to: AHFIDQSLDKVEAKDLRSDMGCG*WELIRW
Trigger: CCACCTTATGAGCTCCCAGCATCCACATCCCATGTC...GCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR GCA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCTGGTATGGCCATGTTaGCATAGGAGTATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: DRFQPSLKASLFEHTLELLVWPC*HRSMGD
Trigger: ATCCCCCATACTCCTATGGCAACATGGCCATACCAG...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCTGGTATGGCCATGTTaGCATAGGAGTATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGLVWPC*HRSMGD
Trigger: ATCCCCCATACTCCTATGGCAACATGGCCATACCAG...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGGGCTTAGGTGGCCCTaGTGGCAGCCCAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLGLRWP*WQPNVQ
Trigger: CTGGACATTGGGCTGCCAGCAGGGCCACCTAAGCCC...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFYWARV*SRFPES
Trigger: GCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTA...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAACGGGGACATCCTACTaGGCCAGAGTCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSTGTSY*ARVWSR
Trigger: CCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGT...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCCTCCTAGCTCTGAAGTaGACAGCTGTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWALLALK*TAVSPC
Trigger: ACAGGGTGATACAGCTGTCCACTTCAGAGCTAGGAG...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp ACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGCTCCTAGCTCTGAAGTaGACAGCTGTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: TQLLLGLRVGEYLYQKGMLLALK*TAVSPC
Trigger: ACAGGGTGATACAGCTGTCCACTTCAGAGCTAGGAG...CATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAATGGAGGTCCAAGGTATaGAGCTGGGGCTTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSREWRSKV*SWGLGL
Trigger: GAGCCCCAAGCCCCAGCTCCATACCTTGGACCTCCA...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCGTAAGTTGTGGGTGGTaGAGGTCCAAGGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: AHFIDQSLDKVEAKDLRSVSCGW*RSKVWS
Trigger: GCTCCATACCTTGGACCTCCACCACCCACAACTTAC...GCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAGAGCTCATAAGGTGGTaGAGGAAGTGGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRELIRW*RKWEAR
Trigger: TCTGGCTTCCCACTTCCTCCACCACCTTATGAGCTC...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGACTGGGACATGGGATGTaGATGCTGGGAGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRLGHGM*MLGAHK
Trigger: CTTATGAGCTCCCAGCATCCACATCCCATGTCCCAG...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTGGGGGATCTGGGACATaGGATGTGGATGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSGGSGT*DVDAGS
Trigger: GCTCCCAGCATCCACATCCCATGTCCCAGATCCCCC...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAGCTTGGAGACTGGTATaGCCATGTTGCCATAGGAGT +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREAWRLV*PCCHRS
Trigger: ACTCCTATGGCAACATGGCCATACCAGTCTCCAAGC...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCGGACTAGCGCTAGCTaGCTCTCTGTCAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSRTSAS*LSVSGY
Trigger: GTACCCGCTGACAGAGAGCCAGCTAGCGCTAGTCCG...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCTCTAGAAACCTGTaGTGGAGTCACAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLGSRNL*WSHSRV
Trigger: CACCCTGCTGTGACTCCACCACAGGTTTCTAGAGCC...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR TCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAAGGAGTTGGGCATGAGTaGGTAGGGGTACTCCACTGG +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSREGVGHE*VGVLHW
Trigger: CCAGTGGAGTACCCCTACTCACTCATGCCCAACTCC...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp TCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAACAAGGCAAGCCTCTTTaGACACACCTTGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: SAPSGTQGWGVPLSEGNEQGKPL*THLGTS
Trigger: GGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTG...TTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAATGGAGGCTAAAGACCTaGGGAGCCGAGTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSREWRLKT*GAESGK
Trigger: CTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCA...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR GCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCCATCAGGGGTCACCCTaGTTTCCTCCTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFHQGSP*FPPLSS
Trigger: TGAGGACAGAGGAGGAAAGCAGGGTGACCCCTGATG...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000540264.2
CDS-3UTR GCA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGATGGACATGATCTCCTaGCAAGTCAGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGMDMIS*QVSSIS
Trigger: AGAGATGGAACTGACTTGGCAGGAGATCATGTCCAT...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGACTGGTATGGCCATGTTaGCATAGGAGTATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRLVWPC*HRSMGD
Trigger: ATCCCCCATACTCCTATGGCAACATGGCCATACCAG...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTCTCTACATATTCGCTaGGCCGCCGACCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSSLHIR*AADQPL
Trigger: CAGAGGCTGGTCGGCGGCGCAGCGAATATGTAGAGA...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCTCTACATATTCGCTaGGCCGCCGACCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGTSKHLLPLSSSSGLENSLHIR*AADQPL
Trigger: CAGAGGCTGGTCGGCGGCGCAGCGAATATGTAGAGA...GTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTGCCACCTTGTTTTTaGCCCGTCGTCGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSRELPPCF*PVVGCP
Trigger: GGGACATCCGACGACGGGGCAAAAACAAGGTGGCAG...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTTCCAGCTTCCTCTTaGGGCAGTTCTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EHTLELPNTCCHCHPLLVFPASS*GSSGLP
Trigger: TGGCAGCCCAGAACTGCCGCAAGAGGAAGCTGGAAA...GACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCACCATCGGCAGCCTGTTaGAGCGCGTACTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSPSAAC*SAYSSG
Trigger: TCCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGG...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGTAAGTTGTGGGTGGTaGAGGTCCAAGGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLVSCGW*RSKVWS
Trigger: GCTCCATACCTTGGACCTCCACCACCCACAACTTAC...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGAGCTCATAAGGTGGTaGAGGAAGTGGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLELIRW*RKWEAR
Trigger: TCTGGCTTCCCACTTCCTCCACCACCTTATGAGCTC...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTGGGAGCTCATAAGGTaGTGGAGGAAGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FQTLVAIVILFWSRELSSWELIR*WRKWEA
Trigger: GGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCA...GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGCTTGGAGACTGGTATaGCCATGTTGCCATAGGAGT +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNAWRLV*PCCHRS
Trigger: ACTCCTATGGCAACATGGCCATACCAGTCTCCAAGC...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAACAGTGGCTTGGAGACTaGTATGGCCATGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: SAPSGTQGWGVPLSEGNEQWLGD*YGHVAI
Trigger: TATGGCAACATGGCCATACCAGTCTCCAAGCCACTG...TTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGACAGTGGCTTGGAGACTaGTATGGCCATGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRQWLGD*YGHVAI
Trigger: TATGGCAACATGGCCATACCAGTCTCCAAGCCACTG...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAAGAAAAGGAATCTTCATaGCCAAGGCCCGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: EDRFQPSLKASLFEHTLEEKESS*PRPDVH
Trigger: ATGAACGTCGGGCCTTGGCCATGAAGATTCCTTTTC...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCGAAAAGGAATCTTCATaGCCAAGGCCCGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGEKESS*PRPDVH
Trigger: ATGAACGTCGGGCCTTGGCCATGAAGATTCCTTTTC...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATTCATCCCGAAGGTGCTaGAAAATGTCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNSSRRC*KMSRYS
Trigger: GCTGTACCGTGACATTTTCCAGCACCTTCGGGATGA...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGTTTGCACTACCTCCTTaGAGGGGCTCCCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HLGTSKHLLPLSSSSGLEFALPP*RGSLQL
Trigger: AAGCTGGAGGGAGCCCCTCCAAGGAGGTAGTGCAAA...CTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS-3UTR TCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCCAAGGAGTTGGGCATaGGTGAGTAGGGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSPRSWA*VSRGTP
Trigger: TGGAGTACCCCTACTCACTCATGCCCAACTCCTTGG...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCCATCAGGGGTCACCCTaGTTTCCTCCTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: WNFQTLVAIVILFWSRELHQGSP*FPPLSS
Trigger: TGAGGACAGAGGAGGAAAGCAGGGTGACCCCTGATG...GAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000540264.2
CDS-3UTR GCA 90 bp GAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCGACATGGGATGTGGATaGTGGGAGCTCATAAGGTGG +
Preference number: 4 (lower is better)
Translates to: EHTLELPNTCCHCHPLLVDMGCG*WELIRW
Trigger: CCACCTTATGAGCTCCCAGCATCCACATCCCATGTC...GACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGCCACCTTGTTTTTaGCCCGTCGTCGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLLPPCF*PVVGCP
Trigger: GGGACATCCGACGACGGGGCAAAAACAAGGTGGCAG...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTTTCCAGCTTCCTCTTaGGGCAGTTCTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSFPASS*GSSGLP
Trigger: TGGCAGCCCAGAACTGCCGCAAGAGGAAGCTGGAAA...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGATTCATCCCGAAGGTaGTGGAAAATGTCACGGTAC +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNDSSRR*WKMSRY
Trigger: GTACCGTGACATTTTCCAGCACCTTCGGGATGAATC...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAACTTCCAAACACTTGTTaGCATTGTCATCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DQSLDKVEAKDLRSRVRELPNTC*HCHPLL
Trigger: CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAG...TTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp TTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTATGGAGCTGGGGCTTaGGGCTCAAATGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: FQTLVAIVILFWSRELSSYGAGA*GSNDGS
Trigger: TGAGCCATCATTTGAGCCCCAAGCCCCAGCTCCATA...GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTGGAGTATGGGGGATCTaGGACATGGGATGTGGATGC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSGVWGI*DMGCGC
Trigger: GCATCCACATCCCATGTCCCAGATCCCCCATACTCC...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGCTTGGAGACTGGTATaGCCATGTTGCCATAGGAGT +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLAWRLV*PCCHRS
Trigger: ACTCCTATGGCAACATGGCCATACCAGTCTCCAAGC...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCAGAGGCTCAGTGGCTTaGAGACTGGTATGGCCATGT +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFRGSVA*RLVWPC
Trigger: ACATGGCCATACCAGTCTCCAAGCCACTGAGCCTCT...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAAGATTCTGGGTCTTCTTaGGGCTTAGGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSREDSGSS*GLGGPA
Trigger: AGCAGGGCCACCTAAGCCCCAAGAAGACCCAGAATC...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCGAACTCAGCTCCTTCTaGGACTCAGGGTTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: WNFQTLVAIVILFWSRELELSSF*DSGLGS
Trigger: ACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC...GAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCATTGTCATCCTCTTCTaGTCTAGAGAACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFIVILF*SRELSS
Trigger: GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAAT...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAATTGTCATCCTCTTCTaGTCTAGAGAACTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREIVILF*SRELSS
Trigger: GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAAT...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AAGGTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCTTTGAACACACCTTaGAACTTCCAAACACTTGTT +
Preference number: 4 (lower is better)
Translates to: KVEAKDLRSRVREDRFQPSLNTP*NFQTLV
Trigger: AACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGA...GGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR TCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCAGAATCTGGGTGGATTaGGCAGGGGCAGTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFRIWVD*AGAVSC
Trigger: ACAACTTACTGCCCCTGCTCAATCCACCCAGATTCT...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGCCAAGGAGTTGGGCATaGGTGAGTAGGGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLPRSWA*VSRGTP
Trigger: TGGAGTACCCCTACTCACTCATGCCCAACTCCTTGG...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATTTATCAGAAGGGAATaGAGGAAATCCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREFIRRE*RKSHQQ
Trigger: CTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAA...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGCCCCATCCTCACTCATaGTGGATTCATCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLPHPHS*WIHQSL
Trigger: AAGGGATTGATGAATCCAGCATGAGTGAGGATGGGG...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS-3UTR CCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCCTCCTAGCTCTGAAGTaGACAGCTGTATCACCCTGT +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFLLALK*TAVSPC
Trigger: ACAGGGTGATACAGCTGTCCACTTCAGAGCTAGGAG...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCATATGGAGCTGGGGCTTaGGGCTCAAATGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSYGAGA*GSNDGS
Trigger: TGAGCCATCATTTGAGCCCCAAGCCCCAGCTCCATA...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACGAGCTCATAAGGTGGTaGAGGAAGTGGGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LGTSKHLLPLSSSSGLENELIRW*RKWEAR
Trigger: TCTGGCTTCCCACTTCCTCCACCACCTTATGAGCTC...GTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCTGGGACATGGGATGTaGATGCTGGGAGCTCATAAG +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSLGHGM*MLGAHK
Trigger: CTTATGAGCTCCCAGCATCCACATCCCATGTCCCAG...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCTAGAAACCTGTGGTaGAGTCACAGCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGTSKHLLPLSSSSGLENSRNLW*SHSRVR
Trigger: CCTCACCCTGCTGTGACTCCACCACAGGTTTCTAGA...GTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR TCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCACAAGGCAAGCCTCTTTaGACACACCTTGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSQGKPL*THLGTS
Trigger: GGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTG...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp GAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCTTTTCCTGTGTTGTaGTCTCCACCTCGCCAACTA +
Preference number: 4 (lower is better)
Translates to: EHTLELPNTCCHCHPLLVSFPVL*SPPRQL
Trigger: TAGTTGGCGAGGTGGAGATCACAACACAGGAAAAGA...GACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS-3UTR GCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGATGGACATGATCTCCTaGCAAGTCAGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLMDMIS*QVSSIS
Trigger: AGAGATGGAACTGACTTGGCAGGAGATCATGTCCAT...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGACATGGGATGTGGATaGTGGGAGCTCATAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLDMGCG*WELIRW
Trigger: CCACCTTATGAGCTCCCAGCATCCACATCCCATGTC...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACAGGAGAGTAGCTGTTaGCTGATTCATCCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSREQESSC*LIHPEG
Trigger: ACCTTCGGGATGAATCAGGCAACAGCTACTCTCCTG...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTGCAGTAAGTTGTGGGTaGTGGAGGTCCAAGGTATGG +
Preference number: 4 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLAVSCG*WRSKVW
Trigger: CCATACCTTGGACCTCCACCACCCACAACTTACTGC...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGTAGGGGTACTCCACTaGGTACATCTCTACATATTC +
Preference number: 4 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLVGVLH*VHLYIF
Trigger: GAATATGTAGAGATGTACCCAGTGGAGTACCCCTAC...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGCTCCAGCTGCACAATaGTTTCCAGCTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLAPAAQ*FPASSC
Trigger: GCAAGAGGAAGCTGGAAACCATTGTGCAGCTGGAGC...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTCATCCCGAAGGTGCTaGAAAATGTCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSSSRRC*KMSRYS
Trigger: GCTGTACCGTGACATTTTCCAGCACCTTCGGGATGA...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGCAGCATCGCTATAGTTaGGGGATAATCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLQHRYS*GIILSR
Trigger: CCGACTCAGGATTATCCCTCAACTATAGCGATGCTG...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCAGCATCGCTATAGTTaGGGGATAATCCTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLQHRYS*GIILSR
Trigger: CCGACTCAGGATTATCCCTCAACTATAGCGATGCTG...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCAAGGCAAGCCTCTTTaGACACACCTTGGAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLQGKPL*THLGTS
Trigger: GGAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTG...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGATTCATCCCGAAGGTaGTGGAAAATGTCACGGTAC +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSDSSRR*WKMSRY
Trigger: GTACCGTGACATTTTCCAGCACCTTCGGGATGAATC...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGCAGGAGAGTAGCTGTTaGCTGATTCATCCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLQESSC*LIHPEG
Trigger: ACCTTCGGGATGAATCAGGCAACAGCTACTCTCCTG...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCGTAGGGGTACTCCACTaGGTACATCTCTACATATTC +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFVGVLH*VHLYIF
Trigger: GAATATGTAGAGATGTACCCAGTGGAGTACCCCTAC...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCTGTAGCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGGTAGGGGTACTCCACTaGGTACATCTCTACATATTC +
Preference number: 4 (lower is better)
Translates to: SVAHFIDQSLDKVEAKDLVGVLH*VHLYIF
Trigger: GAATATGTAGAGATGTACCCAGTGGAGTACCCCTAC...CAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CCA 90 bp CTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCTGGGACTCAGGGTTaGGGAGTACCTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: LGTSKHLLPLSSSSGLENSGTQG*GVPLSE
Trigger: TTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGA...GTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTCTGGGACTCAGGGTTaGGGAGTACCTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSSGTQG*GVPLSE
Trigger: TTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGA...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAATGGACATGATCTCCTaGCAAGTCAGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSMDMIS*QVSSIS
Trigger: AGAGATGGAACTGACTTGGCAGGAGATCATGTCCAT...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGATTCATCCCGAAGGTaGTGGAAAATGTCACGGTAC +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLDSSRR*WKMSRY
Trigger: GTACCGTGACATTTTCCAGCACCTTCGGGATGAATC...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp CAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCTTCCTTCCAAACACTTGTTaGCATTGTCATCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QTLVAIVILFWSRELSSFLPNTC*HCHPLL
Trigger: CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAG...GAAGGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGATCTTTGAACACACCTTaGAACTTCCAAACACTTGTT +
Preference number: 4 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRSLNTP*NFQTLV
Trigger: AACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGA...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CCA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATTCTTTGAACACACCTTaGAACTTCCAAACACTTGTT +
Preference number: 4 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNSLNTP*NFQTLV
Trigger: AACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGA...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAATTTATCAGAAGGGAATaGAGGAAATCCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWNFQTLVAIVILFWSREFIRRE*RKSHQQ
Trigger: CTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAA...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR TCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGTTTATCAGAAGGGAATaGAGGAAATCCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLFIRRE*RKSHQQ
Trigger: CTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAA...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR GCA 90 bp TTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGCTTCCAAACACTTGTTaGCATTGTCATCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FEHTLELPNTCCHCHPLLLPNTC*HCHPLL
Trigger: CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAG...CAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS TCA 90 bp GCTGAGCCTGAGCTGACACTGCTGGACGAGGATCCCGGCTACCTTTaGGAATCTGCGAGGACCGCGCCCCGCCCCCGGGCCATTGCTGAG +
Preference number: 5 (lower is better)
Translates to: AEPELTLLDEDPGYL*ESARTAPRPRAIAE
Trigger: CTCAGCAATGGCCCGGGGGCGGGGCGCGGTCCTCGCAGATTCTCAAAGGTAGCCGGGATCCTCGTCCAGCAGTGTCAGCTCAGGCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435572.7
ENST00000553070.5
CDS GCA 90 bp GTACAGCTCTGTCAGCTGTTGGCGCATGACCTCCAGGGTCCGGTCTaGCTCCCCGCGGGCCCTGAGAAGCCGCTCCCGTTCATTGGTCAG +
Preference number: 5 (lower is better)
Translates to: VQLCQLLAHDLQGPV*LPAGPEKPLPFIGQ
Trigger: CTGACCAATGAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 90 bp TCCCGAAGGTGCTGGAAAATGTCACGGTACAGCTCTGTCAGCTGTTaGCGCATGACCTCCAGGGTCCGGTCTGCCTCCCCGCGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SRRCWKMSRYSSVSC*RMTSRVRSASPRAL
Trigger: CAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTGTACCGTGACATTTTCCAGCACCTTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS TCA 90 bp GCAGCCCAATGTCCAGGAGGGCTAAGGGGTCTTGGAGCGGCTCACTaGGCAGGCCTGAGAGGCTCAGTGGCTTGGAGACTGGTATGGCCA +
Preference number: 5 (lower is better)
Translates to: AAQCPGGLRGLGAAH*AGLRGSVAWRLVWP
Trigger: TGGCCATACCAGTCTCCAAGCCACTGAGCCTCTCAGGCCTGCTCAGTGAGCCGCTCCAAGACCCCTTAGCCCTCCTGGACATTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 90 bp TCACCCTGTTCCTGCTCTGCTGGGGAGGACACGGGGACATCCTACTaGGCCAGAGTCTGGTCCAGGTTCCCGGAAAGCCCAGATGGCTCT +
Preference number: 5 (lower is better)
Translates to: SPCSCSAGEDTGTSY*ARVWSRFPESPDGS
Trigger: AGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS-3UTR CAA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGTCTGTGGCCTCCATCTaGGTCCCCCGGGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKSVASI*VPRGTR
Trigger: CCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAGA...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS GCA 90 bp GCTCCAGCTCCCGCTCCAGCTGCACAATGGTTTCCAGCTTCCTCTTaGGGCAGTTCTGGGCTGCCACCTTGTTTTTGCCCCGTCGTCGGA +
Preference number: 5 (lower is better)
Translates to: APAPAPAAQWFPASS*GSSGLPPCFCPVVG
Trigger: TCCGACGACGGGGCAAAAACAAGGTGGCAGCCCAGAACTGCCGCAAGAGGAAGCTGGAAACCATTGTGCAGCTGGAGCGGGAGCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 90 bp CTCAGTCTGTGGCCTCCATCTTGGTCCCCCGGGGCACAAGGAAGATaGTCCCATCGGCAGCCTGTTGCAGCGCGTACTCTTCAGGAGAGT +
Preference number: 5 (lower is better)
Translates to: LSLWPPSWSPGAQGR*SHRQPVAARTLQES
Trigger: ACTCTCCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGGGACCATCTTCCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAGACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS CCA 90 bp TGCTCTGCTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGCCCAGATGGCTCTAGAAACCTGTGG +
Preference number: 5 (lower is better)
Translates to: CSAGEDTGTSYWARV*SRFPESPDGSRNLW
Trigger: CCACAGGTTTCTAGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS CCA 90 bp TGCTCTGCTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGCCCAGATGGCTCTAGAAACCTCCTC +
Preference number: 5 (lower is better)
Translates to: CSAGEDTGTSYWARV*SRFPESPDGSRNLL
Trigger: GAGGAGGTTTCTAGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553070.5
CDS TCA 90 bp GAGATGAGGCTCCCGGTGTTGTCTCTGGGGAGGCTGAGCCTGAGCTaGCACTGCTGGACGAGGATCCCGGCTACCTTTGAGAATCTGCGA +
Preference number: 5 (lower is better)
Translates to: EMRLPVLSLGRLSLS*HCWTRIPATFENLR
Trigger: TCGCAGATTCTCAAAGGTAGCCGGGATCCTCGTCCAGCAGTGTCAGCTCAGGCTCAGCCTCCCCAGAGACAACACCGGGAGCCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435572.7
ENST00000553070.5
CDS CCA 90 bp CCTAGCTCTGAAGTGGACAGCTGTATCACCCTGTTCCTGCTCTGCTaGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PSSEVDSCITLFLLC*GGHGDILLGQSLVQ
Trigger: CTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATACAGCTGTCCACTTCAGAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 90 bp GTTAGAGCTACACCTGCTAGGGTCAGCAAGTTTGCACTACCTCCTTaGAGGGGCTCCCTCCAGCTTCCCCTGAGGGAAGGAGAGACCGCC +
Preference number: 5 (lower is better)
Translates to: VRATPARVSKFALPP*RGSLQLPLREGETA
Trigger: GGCGGTCTCTCCTTCCCTCAGGGGAAGCTGGAGGGAGCCCCTCCAAGGAGGTAGTGCAAACTTGCTGACCCTAGCAGGTGTAGCTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS CCA 90 bp TGCTCTGCTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGCCCAGATGGCTCTAGAAACCTGTGT +
Preference number: 5 (lower is better)
Translates to: CSAGEDTGTSYWARV*SRFPESPDGSRNLC
Trigger: ACACAGGTTTCTAGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS CCA 90 bp TGCTCTGCTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGCCCAGATGGCTCTAGAAACCACAAG +
Preference number: 5 (lower is better)
Translates to: CSAGEDTGTSYWARV*SRFPESPDGSRNHK
Trigger: CTTGTGGTTTCTAGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553198.1
CDS GCA 90 bp TCTCCTAGCTCTGAAGTGGACAGCTGTATCACCCTGTTCCTGCTCTaGTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SPSSEVDSCITLFLL*WGGHGDILLGQSLV
Trigger: GACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATACAGCTGTCCACTTCAGAGCTAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 90 bp CCATCTCTCCTAGCTCTGAAGTGGACAGCTGTATCACCCTGTTCCTaGTCTGCTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PSLLALKWTAVSPCS*SAGEDTGTSYWARV
Trigger: GACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATACAGCTGTCCACTTCAGAGCTAGGAGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 90 bp GCAGGCCTGAGAGGCTCAGTGGCTTGGAGACTGGTATGGCCATGTTaGCATAGGAGTATGGGGGATCTGGGACATGGGATGTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: AGLRGSVAWRLVWPC*HRSMGDLGHGMWML
Trigger: CAGCATCCACATCCCATGTCCCAGATCCCCCATACTCCTATGGCAACATGGCCATACCAGTCTCCAAGCCACTGAGCCTCTCAGGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 90 bp TGCTCTGCTGGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGCCCAGATGGCTCTAGAAACCTTTTT +
Preference number: 5 (lower is better)
Translates to: CSAGEDTGTSYWARV*SRFPESPDGSRNLF
Trigger: AAAAAGGTTTCTAGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312156.8
CDS CCA 90 bp TGGCCATGTTGCCATAGGAGTATGGGGGATCTGGGACATGGGATGTaGATGCTGGGAGCTCATAAGGTGGTGGAGGAAGTGGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: WPCCHRSMGDLGHGM*MLGAHKVVEEVGSQ
Trigger: CTGGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCAGCATCCACATCCCATGTCCCAGATCCCCCATACTCCTATGGCAACATGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS-3UTR CAA 90 bp GTGGAGGCTAAAGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCAGAATCTGGGTGGATaGAGCAGGGGCAGTAAGTTG +
Preference number: 5 (lower is better)
Translates to: VEAKDLRSRVREDRFQPSQNLGG*SRGSKL
Trigger: CAACTTACTGCCCCTGCTCAATCCACCCAGATTCTG...GGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCTTTAGCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CAA 90 bp GCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCAGCCGCTCCCGTTCATaGGTCAGCCGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AHFIDQSLDKVEAKDLRSSRSRS*VSRSSS
Trigger: GGAGCTGGAGCGGCTGACCAATGAACGGGAGCGGCT...GCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CAA 90 bp GCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGACCCATCGGCAGCCTGTaGCAGCGCGTACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: APSGTQGWGVPLSEGNEGPIGSL*QRVLFR
Trigger: CCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGGG...TCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS CCA 90 bp GTTGCCATAGGAGTATGGGGGATCTGGGACATGGGATGTGGATGCTaGGAGCTCATAAGGTGGTGGAGGAAGTGGGAAGCCAGAATCTGG +
Preference number: 5 (lower is better)
Translates to: VAIGVWGIWDMGCGC*ELIRWWRKWEARIW
Trigger: CCAGATTCTGGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCAGCATCCACATCCCATGTCCCAGATCCCCCATACTCCTATGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 90 bp GCTCAGTGGCTTGGAGACTGGTATGGCCATGTTGCCATAGGAGTATaGGGGATCTGGGACATGGGATGTGGATGCTGGGAGCTCATAAGG +
Preference number: 5 (lower is better)
Translates to: AQWLGDWYGHVAIGV*GIWDMGCGCWELIR
Trigger: CCTTATGAGCTCCCAGCATCCACATCCCATGTCCCAGATCCCCCATACTCCTATGGCAACATGGCCATACCAGTCTCCAAGCCACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS-3UTR CAA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGGATTCTGGGTCTTCTaGGGGCTTAGGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAGFWVF*GLRWPC
Trigger: GCAGGGCCACCTAAGCCCCAAGAAGACCCAGAATCC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCGGATTCTGGGTCTTCTaGGGGCTTAGGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFGFWVF*GLRWPC
Trigger: GCAGGGCCACCTAAGCCCCAAGAAGACCCAGAATCC...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCGGATTCTGGGTCTTCTaGGGGCTTAGGTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGGFWVF*GLRWPC
Trigger: GCAGGGCCACCTAAGCCCCAAGAAGACCCAGAATCC...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTGCTGCCACCTTGTTTTaGCCCCGTCGTCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: DRFQPSLKASLFEHTLELAATLF*PRRRMS
Trigger: GGACATCCGACGACGGGGCAAAAACAAGGTGGCAGC...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGTTCTGGGCTGCCACCTaGTTTTTGCCCCGTCGTCGG +
Preference number: 5 (lower is better)
Translates to: LSEGNEGNPISSSTPLGQFWAAT*FLPRRR
Trigger: CCGACGACGGGGCAAAAACAAGGTGGCAGCCCAGAA...CTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGCTCTGTCAGCTGTaGGCGCATGACCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGQLCQL*AHDLQG
Trigger: ACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTG...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGACCCATCGGCAGCCTGTaGCAGCGCGTACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRPIGSL*QRVLFR
Trigger: CCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGGG...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGTCTGTGGCCTCCATCTaGGTCCCCCGGGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLSVASI*VPRGTR
Trigger: CCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAGA...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS TCA 90 bp TCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATaGAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: SFWDSGLGSTFIRRE*RKSHQQFHPSGPAQ
Trigger: CTGAGCTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS GCA 90 bp CATGTTGCCATAGGAGTATGGGGGATCTGGGACATGGGATGTGGATaGTGGGAGCTCATAAGGTGGTGGAGGAAGTGGGAAGCCAGAATC +
Preference number: 5 (lower is better)
Translates to: HVAIGVWGIWDMGCG*WELIRWWRKWEARI
Trigger: GATTCTGGCTTCCCACTTCCTCCACCACCTTATGAGCTCCCAGCATCCACATCCCATGTCCCAGATCCCCCATACTCCTATGGCAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 90 bp CATCGGCAGCCTGTTGCAGCGCGTACTCTTCAGGAGAGTAGCTGTTaGCTGATTCATCCCGAAGGTGCTGGAAAATGTCACGGTACAGCT +
Preference number: 5 (lower is better)
Translates to: HRQPVAARTLQESSC*LIHPEGAGKCHGTA
Trigger: AGCTGTACCGTGACATTTTCCAGCACCTTCGGGATGAATCAGGCAACAGCTACTCTCCTGAAGAGTACGCGCTGCAACAGGCTGCCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
CDS CCA 90 bp ACCTTGTTTTTGCCCCGTCGTCGGATGTCCCGGACTAGCGCTAGCTaGCTCTCTGTCAGCGGGTACCTTGCCAATAGCTCATTAAAGTCA +
Preference number: 5 (lower is better)
Translates to: TLFLPRRRMSRTSAS*LSVSGYLANSSLKS
Trigger: TGACTTTAATGAGCTATTGGCAAGGTACCCGCTGACAGAGAGCCAGCTAGCGCTAGTCCGGGACATCCGACGACGGGGCAAAAACAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS-3UTR CAA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCGAGAGGCTCAGTGGCTaGGAGACTGGTATGGCCATG +
Preference number: 5 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGERLSG*ETGMAM
Trigger: CATGGCCATACCAGTCTCCAAGCCACTGAGCCTCTC...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGCTGCCACCTTGTTTTaGCCCCGTCGTCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: SAPSGTQGWGVPLSEGNEAATLF*PRRRMS
Trigger: GGACATCCGACGACGGGGCAAAAACAAGGTGGCAGC...TTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGCCCATCGGCAGCCTGTaGCAGCGCGTACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLPIGSL*QRVLFR
Trigger: CCTGAAGAGTACGCGCTGCAACAGGCTGCCGATGGG...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCCCGCCCCCGGGCCATaGCTGAGCGCTGAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLPAPGP*LSAECG
Trigger: TCCACACTCAGCGCTCAGCAATGGCCCGGGGGCGGG...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR CAA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGGATCCCGGCTACCTTaGAGAATCTGCGAGGACCGC +
Preference number: 5 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNGSRLP*RICEDR
Trigger: GCGGTCCTCGCAGATTCTCAAAGGTAGCCGGGATCC...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR CAA 90 bp AACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGTTTGCACTACCTCCTaGGAGGGGCTCCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: NSAPSGTQGWGVPLSEGNVCTTS*EGLPPA
Trigger: AGCTGGAGGGAGCCCCTCCAAGGAGGTAGTGCAAAC...ATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS GCA 90 bp CTTGGAGCATTCAGACCCTGCAGCTCGGTGATGGACATGATCTCCTaGCAAGTCAGTTCCATCTCTCCTAGCTCTGAAGTGGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: LGAFRPCSSVMDMIS*QVSSISPSSEVDSC
Trigger: ACAGCTGTCCACTTCAGAGCTAGGAGAGATGGAACTGACTTGGCAGGAGATCATGTCCATCACCGAGCTGCAGGGTCTGAATGCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS-3UTR CAA 90 bp GCGCACTTTATAGACCAAAGCTTAGACAAGGTGGAGGCTAAAGACCTGAGGAGCGAGAGGCTCAGTGGCTaGGAGACTGGTATGGCCATG +
Preference number: 5 (lower is better)
Translates to: AHFIDQSLDKVEAKDLRSERLSG*ETGMAM
Trigger: CATGGCCATACCAGTCTCCAAGCCACTGAGCCTCTC...GCTCCTCAGGTCTTTAGCCTCCACCTTGTCTAAGCTTTGGTCTATAAAGTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CAA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAAAGCCGCTCCCGTTCATaGGTCAGCCGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PWNFQTLVAIVILFWSRESRSRS*VSRSSS
Trigger: GGAGCTGGAGCGGCTGACCAATGAACGGGAGCGGCT...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAAGCCGCTCCCGTTCATaGGTCAGCCGCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSSRSRS*VSRSSS
Trigger: GGAGCTGGAGCGGCTGACCAATGAACGGGAGCGGCT...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGCAGCTCTGTCAGCTGTaGGCGCATGACCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLQLCQL*AHDLQG
Trigger: ACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTG...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAATCTGTGGCCTCCATCTaGGTCCCCCGGGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: PWNFQTLVAIVILFWSRESVASI*VPRGTR
Trigger: CCTTGTGCCCCGGGGGACCAAGATGGAGGCCACAGA...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCACTTCCAAACACTTGTaGCCATTGTCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LRSRVREDRFQPSLKASLTSKHL*PLSSSS
Trigger: AGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGT...GAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CAA 90 bp AGACCTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGGGAACTTCCAAACACTaGTTGCCATTGTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: RPEEPSQGRQIPALPQGKGTSKH*LPLSSS
Trigger: AGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC...CTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CAA 90 bp CTGAGGAGCCGAGTCAGGGAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCCTCTTTGAACACACCTaGGAACTTCCAAACACTTGT +
Preference number: 5 (lower is better)
Translates to: LRSRVREDRFQPSLKASLLFEHT*ELPNTC
Trigger: ACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG...GAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTCCCTGACTCGGCTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312156.8
ENST00000435572.7
CDS-3UTR CAA 90 bp TTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCATGAGGCTCCCGGTGTaGTCTCTGGGGAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: FQTLVAIVILFWSRELSSMRLPV*SLGRLS
Trigger: GCTCAGCCTCCCCAGAGACAACACCGGGAGCCTCAT...GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435572.7
CDS-3UTR CAA 90 bp ACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTCCTAGGGTCAGCAAGTTaGCACTACCTCCTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TDSSPPSRQASLNTPWNFLGSAS*HYLLGG
Trigger: CCCTCCAAGGAGGTAGTGCAAACTTGCTGACCCTAG...GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS-3UTR CAA 90 bp GAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTCTGGGCTGCCACCTaGTTTTTGCCCCGTCGTCGG +
Preference number: 5 (lower is better)
Translates to: EHTLELPNTCCHCHPLLVFWAAT*FLPRRR
Trigger: CCGACGACGGGGCAAAAACAAGGTGGCAGCCCAGAA...GACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGTTCTGGGACTCAGGGTaGGGGAGTACCTTTATCAGA +
Preference number: 5 (lower is better)
Translates to: ENSAPSGTQGWGVPLSEGFWDSG*GSTFIR
Trigger: TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAA...CCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GAAGACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACAAATGATGGCTCACTaGGAGCATTCAGACCCTGCA +
Preference number: 5 (lower is better)
Translates to: EDRFQPSLKASLFEHTLEQMMAH*EHSDPA
Trigger: TGCAGGGTCTGAATGCTCCAAGTGAGCCATCATTTG...TTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCAGCAAATGATGGCTCACTaGGAGCATTCAGACCCTGCA +
Preference number: 5 (lower is better)
Translates to: LSEGNEGNPISSSTPLGQQMMAH*EHSDPA
Trigger: TGCAGGGTCTGAATGCTCCAAGTGAGCCATCATTTG...CTGGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGACAGAATCTGGGTGGATaGAGCAGGGGCAGTAAGTTG +
Preference number: 5 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRQNLGG*SRGSKL
Trigger: CAACTTACTGCCCCTGCTCAATCCACCCAGATTCTG...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp AACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTTTCTGGGCTGCCACCTaGTTTTTGCCCCGTCGTCGG +
Preference number: 5 (lower is better)
Translates to: NTPWNFQTLVAIVILFWSFWAAT*FLPRRR
Trigger: CCGACGACGGGGCAAAAACAAGGTGGCAGCCCAGAA...AGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCCAGCTCTGTCAGCTGTaGGCGCATGACCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: WNFQTLVAIVILFWSRELQLCQL*AHDLQG
Trigger: ACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTG...GAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATTCTGGGACTCAGGGTaGGGGAGTACCTTTATCAGA +
Preference number: 5 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREFWDSG*GSTFIR
Trigger: TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAA...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGATTCTGGGACTCAGGGTaGGGGAGTACCTTTATCAGA +
Preference number: 5 (lower is better)
Translates to: APSGTQGWGVPLSEGNEGFWDSG*GSTFIR
Trigger: TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAA...TCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCCACAGTCAGTTCCTTaGGTAGCACAGGAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: PLSEGNEGNPISSSTPLGPQSVP*VAQEVF
Trigger: AAAGACCTCCTGTGCTACCAAAGGAACTGACTGTGG...GCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS-3UTR CAA 90 bp TCTAGAGAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGACAAATGATGGCTCACTaGGAGCATTCAGACCCTGCA +
Preference number: 5 (lower is better)
Translates to: SRELSSFWDSGLGSTFIRQMMAH*EHSDPA
Trigger: TGCAGGGTCTGAATGCTCCAAGTGAGCCATCATTTG...TCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTCTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAAGAGAGGCTCAGTGGCTaGGAGACTGGTATGGCCATG +
Preference number: 5 (lower is better)
Translates to: PWNFQTLVAIVILFWSREERLSG*ETGMAM
Trigger: CATGGCCATACCAGTCTCCAAGCCACTGAGCCTCTC...TTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAGGATCATCTACCGGCAAGTaGACAATCTTGTCCGTAGGA +
Preference number: 5 (lower is better)
Translates to: APSGTQGWGVPLSEGNEGSSTGK*TILSVG
Trigger: TCCTACGGACAAGATTGTCAACTTGCCGGTAGATGA...TCCTTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTGCTGCCACCTTGTTTTaGCCCCGTCGTCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLAATLF*PRRRMS
Trigger: GGACATCCGACGACGGGGCAAAAACAAGGTGGCAGC...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GACAGATTCCAGCCCTCCCTCAAGGCAAGCCTCTTTGAACACACCTTGGAACTTTCAAGGCAAGCCTCTTaGAACACACCTTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: DRFQPSLKASLFEHTLELSRQAS*NTPWNF
Trigger: GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGA...AAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGAGGGAGGGCTGGAATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCGGAACTTCCAAACACTaGTTGCCATTGTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWAGTSKH*LPLSSS
Trigger: AGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GTACCTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGTCATCTACCGGCAAGTaGACAATCTTGTCCGTAGGA +
Preference number: 5 (lower is better)
Translates to: VPLSEGNEGNPISSSTPLSSTGK*TILSVG
Trigger: TCCTACGGACAAGATTGTCAACTTGCCGGTAGATGA...CAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GAACTCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAAAAACACTTGTTGCCATaGTCATCCTCTTCTGGTCTA +
Preference number: 5 (lower is better)
Translates to: ELSSFWDSGLGSTFIRREKHLLP*SSSSGL
Trigger: TAGACCAGAAGAGGATGACAATGGCAACAAGTGTTT...TTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTTTATCAGAAGGGAATGAAGGAAATCCCATCAGCAGTTCCACCCCTCTGGGCCACTTCCAAACACTTGTaGCCATTGTCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LYQKGMKEIPSAVPPLWATSKHL*PLSSSS
Trigger: AGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGT...GGCCCAGAGGGGTGGAACTGCTGATGGGATTTCCTTCATTCCCTTCTGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCATCTACCGGCAAGTaGACAATCTTGTCCGTAGGA +
Preference number: 5 (lower is better)
Translates to: EHTLELPNTCCHCHPLLVSSTGK*TILSVG
Trigger: TCCTACGGACAAGATTGTCAACTTGCCGGTAGATGA...GACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TCAGCTCCTTCTGGGACTCAGGGTTGGGGAGTACCTTTATCAGAAGGGAATGAAACTTCCAAACACTTGTaGCCATTGTCATCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SAPSGTQGWGVPLSEGNETSKHL*PLSSSS
Trigger: AGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGT...TTCATTCCCTTCTGATAAAGGTACTCCCCAACCCTGAGTCCCAGAAGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTCAAGGCAAGCCTCTTaGAACACACCTTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: EHTLELPNTCCHCHPLLVSRQAS*NTPWNF
Trigger: GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGA...GACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAGCTCCAAACACTTGTTGCCATaGTCATCCTCTTCTGGTCTA +
Preference number: 5 (lower is better)
Translates to: FQTLVAIVILFWSRELSSKHLLP*SSSSGL
Trigger: TAGACCAGAAGAGGATGACAATGGCAACAAGTGTTT...GGAGCTGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACGGAACTTCCAAACACTaGTTGCCATTGTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LGTSKHLLPLSSSSGLENGTSKH*LPLSSS
Trigger: AGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC...GTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGCTCTTTGAACACACCTaGGAACTTCCAAACACTTGT +
Preference number: 5 (lower is better)
Translates to: HLGTSKHLLPLSSSSGLELFEHT*ELPNTC
Trigger: ACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG...CTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp CTCTTTGAACACACCTTGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTTCAAGGCAAGCCTCTTaGAACACACCTTGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LFEHTLELPNTCCHCHPLSRQAS*NTPWNF
Trigger: GAAGTTCCAAGGTGTGTTCAAAGAGGCTTGCCTTGA...AAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp TGGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCAAACACTTGTTGCCATaGTCATCCTCTTCTGGTCTA +
Preference number: 5 (lower is better)
Translates to: WNFQTLVAIVILFWSRELKHLLP*SSSSGL
Trigger: TAGACCAGAAGAGGATGACAATGGCAACAAGTGTTT...GAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS-3UTR CAA 90 bp GGAACTTCCAAACACTTGTTGCCATTGTCATCCTCTTCTGGTCTAGAGAACTCACTCTTTGAACACACCTaGGAACTTCCAAACACTTGT +
Preference number: 5 (lower is better)
Translates to: GTSKHLLPLSSSSGLENSLFEHT*ELPNTC
Trigger: ACAAGTGTTTGGAAGTTCCAAGGTGTGTTCAAAGAG...TGAGTTCTCTAGACCAGAAGAGGATGACAATGGCAACAAGTGTTTGGAAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
CDS CAA 72 bp GCCTCCCCGCGGGCCCTGAGAAGCCGCTCCCGTTCATaGGTCAGCCGCTCCAGCTCCCGCTCCAGCTGCACA +
Preference number: 6 (lower is better)
Translates to: ASPRALRSRSRS*VSRSSSRSSCT
Trigger: TGTGCAGCTGGAGCGGGAGCTGGAGCGGCTGACCAATGAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS TCA 72 bp ATCTGCGAGGACCGCGCCCCGCCCCCGGGCCATTGCTaGGCGCTGAGTGTGGAAGCTCAGGCTGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: ICEDRAPPPGHC*ALSVEAQAELS
Trigger: GCTCAGCTCAGCCTGAGCTTCCACACTCAGCGCTCAGCAATGGCCCGGGGGCGGGGCGCGGTCCTCGCAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435572.7
ENST00000553070.5
CDS TCA 72 bp GAGCTGACACTGCTGGACGAGGATCCCGGCTACCTTTaGGAATCTGCGAGGACCGCGCCCCGCCCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: ELTLLDEDPGYL*ESARTAPRPRA
Trigger: GGCCCGGGGGCGGGGCGCGGTCCTCGCAGATTCTCAAAGGTAGCCGGGATCCTCGTCCAGCAGTGTCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435572.7
ENST00000553070.5
CDS GCA 72 bp TGTCAGCTGTTGGCGCATGACCTCCAGGGTCCGGTCTaGCTCCCCGCGGGCCCTGAGAAGCCGCTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: CQLLAHDLQGPV*LPAGPEKPLPF
Trigger: GAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CAA 90 bp GTCCGGTCTGCCTCCCCGCGGGCCCTGAGAAGCCGCTCCCGTTCATaGGTCAGCCGCTCCAGCTCCCGCTCCAGCTGCACAATGGTTTCC +
Preference number: 6 (lower is better)
Translates to: VRSASPRALRSRSRS*VSRSSSRSSCTMVS
Trigger: GGAAACCATTGTGCAGCTGGAGCGGGAGCTGGAGCGGCTGACCAATGAACGGGAGCGGCTTCTCAGGGCCCGCGGGGAGGCAGACCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS TCA 72 bp AAATGTCACGGTACAGCTCTGTCAGCTGTTGGCGCATaGCCTCCAGGGTCCGGTCTGCCTCCCCGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: KCHGTALSAVGA*PPGSGLPPRGP
Trigger: GGGCCCGCGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTGTACCGTGACATTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS TCA 72 bp GGGCCATTGCTGAGCGCTGAGTGTGGAAGCTCAGGCTaGGCTGAGCACAGGAGCCCCAAGCAGGCGCACCAG +
Preference number: 6 (lower is better)
Translates to: GPLLSAECGSSG*AEHRSPKQAHQ
Trigger: CTGGTGCGCCTGCTTGGGGCTCCTGTGCTCAGCTCAGCCTGAGCTTCCACACTCAGCGCTCAGCAATGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435572.7
ENST00000553070.5
CDS CAA 90 bp ATCCCGAAGGTGCTGGAAAATGTCACGGTACAGCTCTGTCAGCTGTaGGCGCATGACCTCCAGGGTCCGGTCTGCCTCCCCGCGGGCCCT +
Preference number: 6 (lower is better)
Translates to: IPKVLENVTVQLCQL*AHDLQGPVCLPAGP
Trigger: AGGGCCCGCGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTGTACCGTGACATTTTCCAGCACCTTCGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS TCA 72 bp CTCCCGGTGTTGTCTCTGGGGAGGCTGAGCCTGAGCTaGCACTGCTGGACGAGGATCCCGGCTACCTTTGAG +
Preference number: 6 (lower is better)
Translates to: LPVLSLGRLSLS*HCWTRIPATFE
Trigger: CTCAAAGGTAGCCGGGATCCTCGTCCAGCAGTGTCAGCTCAGGCTCAGCCTCCCCAGAGACAACACCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435572.7
ENST00000553070.5
CDS CCA 72 bp GGGGAGGACACGGGGACATCCTACTGGGCCAGAGTCTaGTCCAGGTTCCCGGAAAGCCCAGATGGCTCTAGA +
Preference number: 6 (lower is better)
Translates to: GEDTGTSYWARV*SRFPESPDGSR
Trigger: TCTAGAGCCATCTGGGCTTTCCGGGAACCTGGACCAGACTCTGGCCCAGTAGGATGTCCCCGTGTCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 72 bp TGGCCTCCATCTTGGTCCCCCGGGGCACAAGGAAGATaGTCCCATCGGCAGCCTGTTGCAGCGCGTACTCTT +
Preference number: 6 (lower is better)
Translates to: WPPSWSPGAQGR*SHRQPVAARTL
Trigger: AAGAGTACGCGCTGCAACAGGCTGCCGATGGGACCATCTTCCTTGTGCCCCGGGGGACCAAGATGGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
CDS CCA 72 bp TTGCCCCGTCGTCGGATGTCCCGGACTAGCGCTAGCTaGCTCTCTGTCAGCGGGTACCTTGCCAATAGCTCA +
Preference number: 6 (lower is better)
Translates to: LPRRRMSRTSAS*LSVSGYLANSS
Trigger: TGAGCTATTGGCAAGGTACCCGCTGACAGAGAGCCAGCTAGCGCTAGTCCGGGACATCCGACGACGGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 72 bp TGCTGGAAAATGTCACGGTACAGCTCTGTCAGCTGTTaGCGCATGACCTCCAGGGTCCGGTCTGCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: CWKMSRYSSVSC*RMTSRVRSASP
Trigger: CGGGGAGGCAGACCGGACCCTGGAGGTCATGCGCCAACAGCTGACAGAGCTGTACCGTGACATTTTCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 72 bp TCTGAAGTGGACAGCTGTATCACCCTGTTCCTGCTCTaGTGGGGAGGACACGGGGACATCCTACTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SEVDSCITLFLL*WGGHGDILLGQ
Trigger: CTGGCCCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATACAGCTGTCCACTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 72 bp AGGGGTACTCCACTGGGTACATCTCTACATATTCGCTaGGCCGCCGACCAGCCTCTGTCCCCTCCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: RGTPLGTSLHIR*AADQPLSPPAQ
Trigger: TTGAGCTGGAGGGGACAGAGGCTGGTCGGCGGCGCAGCGAATATGTAGAGATGTACCCAGTGGAGTACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 72 bp CCCGCTCCAGCTGCACAATGGTTTCCAGCTTCCTCTTaGGGCAGTTCTGGGCTGCCACCTTGTTTTTGCCCC +
Preference number: 6 (lower is better)
Translates to: PAPAAQWFPASS*GSSGLPPCFCP
Trigger: GGGGCAAAAACAAGGTGGCAGCCCAGAACTGCCGCAAGAGGAAGCTGGAAACCATTGTGCAGCTGGAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 72 bp ACACCTGCTAGGGTCAGCAAGTTTGCACTACCTCCTTaGAGGGGCTCCCTCCAGCTTCCCCTGAGGGAAGGA +
Preference number: 6 (lower is better)
Translates to: TPARVSKFALPP*RGSLQLPLREG
Trigger: TCCTTCCCTCAGGGGAAGCTGGAGGGAGCCCCTCCAAGGAGGTAGTGCAAACTTGCTGACCCTAGCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540264.2
CDS GCA 72 bp CTAGCTCTGAAGTGGACAGCTGTATCACCCTGTTCCTaGTCTGCTGGGGAGGACACGGGGACATCCTACTGG +
Preference number: 6 (lower is better)
Translates to: LALKWTAVSPCS*SAGEDTGTSYW
Trigger: CCAGTAGGATGTCCCCGTGTCCTCCCCAGCAGAGCAGGAACAGGGTGATACAGCTGTCCACTTCAGAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CAA 72 bp AGCCAGAATCTGGGTGGATTGAGCAGGGGCAGTAAGTaGTGGGTGGTGGAGGTCCAAGGTATGGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SQNLGGLSRGSK*WVVEVQGMELG
Trigger: CCCCAGCTCCATACCTTGGACCTCCACCACCCACAACTTACTGCCCCTGCTCAATCCACCCAGATTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 72 bp CAGAATCTGGGTGGATTGAGCAGGGGCAGTAAGTTGTaGGTGGTGGAGGTCCAAGGTATGGAGCTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: QNLGGLSRGSKL*VVEVQGMELGL
Trigger: AAGCCCCAGCTCCATACCTTGGACCTCCACCACCCACAACTTACTGCCCCTGCTCAATCCACCCAGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 72 bp AGAGGCTCAGTGGCTTGGAGACTGGTATGGCCATGTTaGCATAGGAGTATGGGGGATCTGGGACATGGGATG +
Preference number: 6 (lower is better)
Translates to: RGSVAWRLVWPC*HRSMGDLGHGM
Trigger: CATCCCATGTCCCAGATCCCCCATACTCCTATGGCAACATGGCCATACCAGTCTCCAAGCCACTGAGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS CCA 72 bp TGCCATAGGAGTATGGGGGATCTGGGACATGGGATGTaGATGCTGGGAGCTCATAAGGTGGTGGAGGAAGTG +
Preference number: 6 (lower is better)
Translates to: CHRSMGDLGHGM*MLGAHKVVEEV
Trigger: CACTTCCTCCACCACCTTATGAGCTCCCAGCATCCACATCCCATGTCCCAGATCCCCCATACTCCTATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 72 bp TTCAGACCCTGCAGCTCGGTGATGGACATGATCTCCTaGCAAGTCAGTTCCATCTCTCCTAGCTCTGAAGTG +
Preference number: 6 (lower is better)
Translates to: FRPCSSVMDMIS*QVSSISPSSEV
Trigger: CACTTCAGAGCTAGGAGAGATGGAACTGACTTGGCAGGAGATCATGTCCATCACCGAGCTGCAGGGTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1
CDS GCA 72 bp CCTGTTGCAGCGCGTACTCTTCAGGAGAGTAGCTGTTaGCTGATTCATCCCGAAGGTGCTGGAAAATGTCAC +
Preference number: 6 (lower is better)
Translates to: PVAARTLQESSC*LIHPEGAGKCH
Trigger: GTGACATTTTCCAGCACCTTCGGGATGAATCAGGCAACAGCTACTCTCCTGAAGAGTACGCGCTGCAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
CDS TCA 72 bp TCCCCTCCAGCTCAAGAGATTCAGCATCGCTATAGTTaGGGGATAATCCTGAGTCGGATTCTGGGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SPPAQEIQHRYS*GIILSRILGLL
Trigger: AAGAAGACCCAGAATCCGACTCAGGATTATCCCTCAACTATAGCGATGCTGAATCTCTTGAGCTGGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312156.8
ENST00000435572.7
ENST00000540264.2
ENST00000553070.5
ENST00000553198.1