RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFATC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000072736

Ensembl transcript IDs: ENST00000329524.8, ENST00000346183.8, ENST00000349223.9, ENST00000379165.8, ENST00000535127.2, ENST00000539828.6, ENST00000549350.5, ENST00000553077.5, ENST00000561714.5, ENST00000562171.1, ENST00000562926.5, ENST00000563288.5, ENST00000563319.5, ENST00000563796.5, ENST00000565750.2, ENST00000566301.5, ENST00000566893.5, ENST00000567152.5, ENST00000568466.6, ENST00000569766.5, ENST00000570212.5, ENST00000575270.5

Found 1025 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAATGGCTGGCCCTaGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAAC +
Preference number: 1 (lower is better)
Translates to: LHSQAQKRSGDNGWP*VGIVYTRAAAPHMN
Trigger: GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTTCTGGGCCTGGCTGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 90 bp ATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTAT +
Preference number: 1 (lower is better)
Translates to: IQGLRTREGSLPAHP*SLGNRNLGHVSPNY
Trigger: ATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 90 bp ATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGGAAACAGAAATCTGGGACATGTCTC +
Preference number: 1 (lower is better)
Translates to: IFLNPGTQDSGGEPA*SPLLLGKQKSGTCL
Trigger: GAGACATGTCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 90 bp TCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTaGCTGCTCACCCCTGCTCCTTGGGAAACAGAAATCTGGGACATG +
Preference number: 1 (lower is better)
Translates to: SDLPKSRDSGLGRGA*LLTPAPWETEIWDM
Trigger: CATGTCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 90 bp TCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGACCTGAAGGCTaGAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGA +
Preference number: 1 (lower is better)
Translates to: SPQMVGPTPGPRPEG*RVGNPRSKERNMLR
Trigger: TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGGTCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 90 bp AAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTaGCCCTCCAAAGGAAGCTGTGGGCGTCCAACCACAGGCCCAGAA +
Preference number: 1 (lower is better)
Translates to: KSGHFSGMSTERPTS*PSKGSCGRPTTGPE
Trigger: TTCTGGGCCTGTGGTTGGACGCCCACAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 90 bp CTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGAGGTaGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGG +
Preference number: 1 (lower is better)
Translates to: LCCSCSFAKSTQGLR*RNATFPTNGGSHSW
Trigger: CCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR TCA 90 bp ACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACT +
Preference number: 1 (lower is better)
Translates to: TAYAAPVLLPNLPKA*GGGMLLSPQMVGPT
Trigger: AGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 90 bp GCCCAGGAGCTTCACAACAGGATGTCCCCCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGTTTCATAATGGGCTCGATGATGAGT +
Preference number: 1 (lower is better)
Translates to: AQELHNRMSPSRCFY*PSATFSFIMGSMMS
Trigger: ACTCATCATCGAGCCCATTATGAAACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACTGGGGGACATCCTGTTGTGAAGCTCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562171.1
3UTR TCA 90 bp AAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGA +
Preference number: 1 (lower is better)
Translates to: KAAELETQGPRRETC*EVGGGHKAAVSTVR
Trigger: TCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR CCA 90 bp CTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTaGAAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTC +
Preference number: 1 (lower is better)
Translates to: LASKVTEQPKADASV*KRFYDQMTQTGSAL
Trigger: GAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 90 bp CATGCTGATGTACTGCTCATTTGTGCTTTAGCTCTGCACACAGCCTaGCCTCTAGCTAGAGTTAGAACTGCAAAGCTGCCTAAACCACTG +
Preference number: 1 (lower is better)
Translates to: HADVLLICALALHTA*PLARVRTAKLPKPL
Trigger: CAGTGGTTTAGGCAGCTTTGCAGTTCTAACTCTAGCTAGAGGCCAGGCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTACATCAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 90 bp ACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATaGTTCTGTTTGGAAAAGGTTCTACGACCAGATGACACAAACAGG +
Preference number: 1 (lower is better)
Translates to: TTETGFKGHRTAKGR*FCLEKVLRPDDTNR
Trigger: CCTGTTTGTGTCATCTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 90 bp TCTCATCTCTACACTGCAACTGTGGCAGATGGGATGAGGTCACCATaGATGCATATGTTTGTGGGATGGAGCAAATCAAACTTCTCTGTC +
Preference number: 1 (lower is better)
Translates to: SHLYTATVADGMRSP*MHMFVGWSKSNFSV
Trigger: GACAGAGAAGTTTGATTTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 90 bp GGGTATAGAGGCTATCTGCAGAGAAAGGACTTTTCCACTGGGCTGTaGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCT +
Preference number: 1 (lower is better)
Translates to: GYRGYLQRKDFSTGL*DVYTKHKSYSSILS
Trigger: AGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAAGTCCTTTCTCTGCAGATAGCCTCTATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR CCA 90 bp TGTTCTTTACTAACACTCTCATCTCTACACTGCAACTGTGGCAGATaGGATGAGGTCACCATGGATGCATATGTTTGTGGGATGGAGCAA +
Preference number: 1 (lower is better)
Translates to: CSLLTLSSLHCNCGR*DEVTMDAYVCGMEQ
Trigger: TTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAGTGTTAGTAAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR TCA 90 bp TTTACTAACACTCTCATCTCTACACTGCAACTGTGGCAGATGGGATaGGGTCACCATGGATGCATATGTTTGTGGGATGGAGCAAATCAA +
Preference number: 1 (lower is better)
Translates to: FTNTLISTLQLWQMG*GHHGCICLWDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAGTGTTAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 90 bp GTAGCCATCTTACCCAGGGTCCTGAGGGAAAAAGCAATTTCAACATaGAGCCAGTATGGAGAGATTGCAAGATTACCTAGAAAGTTACCA +
Preference number: 1 (lower is better)
Translates to: VAILPRVLREKAIST*SQYGEIARLPRKLP
Trigger: TGGTAACTTTCTAGGTAATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGATGGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 90 bp AGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGATGCACCTGG +
Preference number: 1 (lower is better)
Translates to: RSGISRTFVLAIIIS*LAVATVFPVIRCTW
Trigger: CCAGGTGCATCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR CCA 90 bp AACATTAGTTTGCATAGGCTGATAGGAAGACCCCACAGGAGGTGTTaGTGTGACTTGAAAAGGCTGGTGTACAATTGGAGAAGGAATCAT +
Preference number: 1 (lower is better)
Translates to: NISLHRLIGRPHRRC*CDLKRLVYNWRRNH
Trigger: ATGATTCCTTCTCCAATTGTACACCAGCCTTTTCAAGTCACACCAACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAAACTAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR TCA 90 bp TTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGTaGCTCTTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: FQAINRMADKPSMPV*LLKPSHLESCIFSA
Trigger: GGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAAGAGTCACACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 90 bp CAAAGACATGTTCTTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTaGATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCC +
Preference number: 1 (lower is better)
Translates to: QRHVLFKAVFSHVSL*ISSKQKATHSIPQP
Trigger: GGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAAGAACATGTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 90 bp GAAGGAATCATATGCTGTTCTTTACTAACACTCTCATCTCTACACTaGAACTGTGGCAGATGGGATGAGGTCACCATGGATGCATATGTT +
Preference number: 1 (lower is better)
Translates to: EGIICCSLLTLSSLH*NCGRWDEVTMDAYV
Trigger: AACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAGTGTTAGTAAAGAACAGCATATGATTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR GCA 90 bp AAGAACATATCAGAGATGAACTTACCATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCTTCTGGTTCA +
Preference number: 1 (lower is better)
Translates to: KNISEMNLPSSKVMS*RPMVAKLGSRSSGS
Trigger: TGAACCAGAAGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGGTAAGTTCATCTCTGATATGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 90 bp CTAAGAGATGTCCTGTTGAGCCTGAATTTGAAGAATGAAATGGTATaGATGACAGTGGTTGACAGCCAAGATTCACTAAACCAGAAAGAG +
Preference number: 1 (lower is better)
Translates to: LRDVLLSLNLKNEMV*MTVVDSQDSLNQKE
Trigger: CTCTTTCTGGTTTAGTGAATCTTGGCTGTCAACCACTGTCATCCATACCATTTCATTCTTCAAATTCAGGCTCAACAGGACATCTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR GCA 90 bp TTCTGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTGCACAATCAATACTGGCTGACATAT +
Preference number: 1 (lower is better)
Translates to: FCQYQFLLFEVLYLN*GVSKYLHNQYWLTY
Trigger: ATATGTCAGCCAGTATTGATTGTGCAGGTATTTTGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR CCA 90 bp GAGAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTaGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCT +
Preference number: 1 (lower is better)
Translates to: ERLQDYLESYQKAML*NVFLYSNTSMMEWS
Trigger: AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRGGEPA*SPLLLG
Trigger: CCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCC...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR GCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCACTCGGGAGGGGAGCCTaGCTGCTCACCCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRALGRGA*LLTPAP
Trigger: AGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAG...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACCACATGCTGACTTTCTaGGGCATAGGTGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNHMLTF*GIGVGL
Trigger: CAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTG...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCAGCTCTGCACACAGCCTaGCCTCTAGCTAGAGTTAGA +
Preference number: 2 (lower is better)
Translates to: AGCSFCWALPWTPVSPAAALHTA*PLARVR
Trigger: TCTAACTCTAGCTAGAGGCCAGGCTGTGTGCAGAGC...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: CKSSTSETREPAAFTLKAGGEPA*SPLLLG
Trigger: CCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCC...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR CAA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTaGCCCCTCCAAAGGAAGCTGTGGGCGTCCAACCACAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: QVWPFLWNVNREANF*PLQRKLWASNHRPR
Trigger: TCTGGGCCTGTGGTTGGACGCCCACAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 2 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPRRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR GCA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCTGTACTGCTCATTTGTaGTTTAGCTCTGCACACAGC +
Preference number: 2 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSCTAHL*FSSAHS
Trigger: GCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTACA...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAATTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEFPHKW*VPLLAP
Trigger: TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAA...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCATTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSFPHKW*VPLLAP
Trigger: TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAA...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCCTCCAAAGGAAGCTGTaGGCGTCCAACCACAGGCCC +
Preference number: 2 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASLQRKL*ASNHRP
Trigger: GGGCCTGTGGTTGGACGCCCACAGCTTCCTTTGGAG...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAAGTAACCAGGTCACCTaGAAAAGCAGCACCTCGGAA +
Preference number: 2 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRASNQVT*KSSTSE
Trigger: TTCCGAGGTGCTGCTTTTGCAGGTGACCTGGTTACT...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCACAGCCAAAGGCAGATaGTTCTGTTTGGAAAAGGTT +
Preference number: 2 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSTAKGR*FCLEKV
Trigger: AACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGT...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCTCCCTTTCCCAGACCTaGACTGGCCTTAGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: QVWPFLWNVNREANFLPLSLSQT*TGLSRE
Trigger: CTCTCTACTAAGGCCAGTTCAGGTCTGGGAAAGGGA...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACACTATCCACATTCTGTaGCACAACTCACTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHTIHIL*HNSLFK
Trigger: CTTGAAAAGTGAGTTGTGTCACAGAATGTGGATAGT...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 2 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCTGAGAAGTTGGTGGTaGACACAAGGCTGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTLRSWW*TQGCSK
Trigger: CTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAG...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTATGCTGAGAAGTTGGTaGTGGACACAAGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTMLRSW*WTQGCS
Trigger: ACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCAT...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCATGCTGAGAAGTTGGTaGTGGACACAAGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: QVWPFLWNVNREANFLPLMLRSW*WTQGCS
Trigger: ACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCAT...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGTCCCTTTCCCAGACCTaGACTGGCCTTAGTAGAGAG +
Preference number: 2 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLSLSQT*TGLSRE
Trigger: CTCTCTACTAAGGCCAGTTCAGGTCTGGGAAAGGGA...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCATCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRASNSLC*SCSFAK
Trigger: TTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGA...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: QVTCKSSTSETREPAAFTSSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR GCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGC +
Preference number: 2 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSGNKRA*CIHTQS
Trigger: GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCC...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAATTCCAACACTTCAATaGTGGAATGGTCTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAIPTLQ*WNGLFS
Trigger: TGAGAAGAGACCATTCCATCATTGAAGTGTTGGAAT...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCTCTTACCCAGGGTCCTaGGGGAAAAAGCAATTTCAA +
Preference number: 2 (lower is better)
Translates to: QVWPFLWNVNREANFLPLSYPGS*GKKQFQ
Trigger: TTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGA...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRLPAHP*SLGNRN
Trigger: ATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAG...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR GCA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATCCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 2 (lower is better)
Translates to: LPKPLRLASKVTEQPKADPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCTGTACTGCTCATTTGTaGTTTAGCTCTGCACACAGC +
Preference number: 2 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSCTAHL*FSSAHS
Trigger: GCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTACA...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGCAGATGCTTCTGTTTaGAAAAGGTTCTACGACCAG +
Preference number: 2 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLADASV*KRFYDQ
Trigger: CTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGC...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAGGGCCTGCAGTCTCCTaGAATAACAGCATCAGGCCT +
Preference number: 2 (lower is better)
Translates to: HVSLCISSKQKATHSIPQGPAVS*NNSIRP
Trigger: AGGCCTGATGCTGTTATTCCAGGAGACTGCAGGCCC...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp AAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTT +
Preference number: 2 (lower is better)
Translates to: KPLRLASKVTEQPKADASNLPKA*GGGMLL
Trigger: AAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATT...AGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATACTGCTCCTGTTCTTTTaGCAAATCTACCCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: SEYQKQGFTARPRRGLVILLLFF*QIYPRP
Trigger: AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAG...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: EGTKGIARGTLAITSCEASSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTTGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 2 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTACTGAGAAGTTGGTGGTaGACACAAGGCTGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLLRSWW*TQGCSK
Trigger: CTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAG...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAGCACCAGGGTGTCTTTaGTGTGGAGGGTCAGGTTAT +
Preference number: 2 (lower is better)
Translates to: HVSLCISSKQKATHSIPQAPGCL*CGGSGY
Trigger: ATAACCTGACCCTCCACACCAAAGACACCCTGGTGC...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAGTCTGGCCATTTCTCTaGAATGTCAACCGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: HVSLCISSKQKATHSIPQVWPFL*NVNREA
Trigger: GGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGAC...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAATTTGCATAGTCCAATaGATGTGTGCTTTAACACCA +
Preference number: 2 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAICIVQ*MCALTP
Trigger: TGGTGTTAAAGCACACATCCATTGGACTATGCAAAT...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CAA 90 bp ACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTaGGAAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACT +
Preference number: 2 (lower is better)
Translates to: TGFKGHRTAKGRCFC*EKVLRPDDTNRKRT
Trigger: AGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCATCTTACCCAGGGTCCTaGGGGAAAAAGCAATTTCAA +
Preference number: 2 (lower is better)
Translates to: EGTKGIARGTLAITSCEASYPGS*GKKQFQ
Trigger: TTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGA...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGTCTTACCCAGGGTCCTaGGGGAAAAAGCAATTTCAA +
Preference number: 2 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLSYPGS*GKKQFQ
Trigger: TTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGA...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CCATCATCTAAAGTGATGTCCTGCAGACCAATGGTTGCAAAGTTAGGCTCTCGACGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 2 (lower is better)
Translates to: PSSKVMSCRPMVAKLGSRRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...TCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR GCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLSSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGAGCCATGTTTCTCTGTaGATCTCCAGTAAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLSHVSL*ISSKQK
Trigger: CTTCTGCTTACTGGAGATGCACAGAGAAACATGGCT...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATATCAGGTTATCACTTCTaGATGTGCTCAGAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: SEYQKQGFTARPRRGLVISGYHF*MCSEPS
Trigger: AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGA...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp GGCCCGTACTTTGTGCTTGAGTTGAGTGCTGTCCAGAATGCATTCTGGTGGCTGGGATGCATATGTTTGTaGGATGGAGCAAATCAAACT +
Preference number: 2 (lower is better)
Translates to: GPYFVLELSAVQNAFWWLGCICL*DGANQT
Trigger: AGTTTGATTTGCTCCATCCCACAAACATATGCATCC...CAGCCACCAGAATGCATTCTGGACAGCACTCAACTCAAGCACAAAGTACGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 90 bp TTGCATAGGCTGATAGGAAGACCCCACAGGAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAATTGGAGAAGGAATCATATGCTGTTC +
Preference number: 2 (lower is better)
Translates to: LHRLIGRPHRRCWCD*KRLVYNWRRNHMLF
Trigger: GAACAGCATATGATTCCTTCTCCAATTGTACACCAGCCTTTTCAAGTCACACCAACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR GCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: TQTGSALHSLLVFMMARNLPAHP*SLGNRN
Trigger: ATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAG...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCGGCATCAAAATTTGGTaGATAGCAACTCTGGATCAT +
Preference number: 2 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASGIKIW*IATLDH
Trigger: ATGATCCAGAGTTGCTATGCACCAAATTTTGATGCC...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp GGCCCGTACTTTGTGCTTGAGTTGAGTGCTGTCCAGAATGCATTCTGGTGGCTGTTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 2 (lower is better)
Translates to: GPYFVLELSAVQNAFWWLFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...CAGCCACCAGAATGCATTCTGGACAGCACTCAACTCAAGCACAAAGTACGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR CCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGTGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 2 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGACTGACAACAGGTGGTaGGCAATAGGCCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRTDNRW*AIGQLP
Trigger: AGGGAGCTGGCCTATTGCCCACCACCTGTTGTCAGT...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 2 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIRRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CCATCATCTAAAGTGATGTCCTGCAGACCAATGGTTGCAAAGTTAGGCTCTCGAGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 2 (lower is better)
Translates to: PSSKVMSCRPMVAKLGSRVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...TCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR GCA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 2 (lower is better)
Translates to: GRPESFQAINRMADKPSMPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGCTGCTCCTGTTCTTTTaGCAAATCTACCCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: LKPSHLESCIFSAHADVLLLLFF*QIYPRP
Trigger: AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAG...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGTGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 2 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAGAAGGCATCAAAATTTaGTGCATAGCAACTCTGGAT +
Preference number: 2 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIEGIKI*CIATLD
Trigger: ATCCAGAGTTGCTATGCACCAAATTTTGATGCCTTC...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CAA 90 bp AGCATTAATAGGAAGACAAGTTGGTCCATTGTACACAACATTAGTTaGCATAGGCTGATAGGAAGACCCCACAGGAGGTGTTGGTGTGAC +
Preference number: 2 (lower is better)
Translates to: SINRKTSWSIVHNIS*HRLIGRPHRRCWCD
Trigger: GTCACACCAACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAAACTAATGTTGTGTACAATGGACCAACTTGTCTTCCTATTAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAATTCCAACACTTCAATaGTGGAATGGTCTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLIPTLQ*WNGLFS
Trigger: TGAGAAGAGACCATTCCATCATTGAAGTGTTGGAAT...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGGGTTCTACGACCAGATaGCACAAACAGGAAGCGCAC +
Preference number: 2 (lower is better)
Translates to: SISSATGIKVFRRHQNLVGSTTR*HKQEAH
Trigger: GTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACC...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGATTTGCATAGTCCAATaGATGTGTGCTTTAACACCA +
Preference number: 2 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLICIVQ*MCALTP
Trigger: TGGTGTTAAAGCACACATCCATTGGACTATGCAAAT...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CAA 90 bp AAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGATGCACCTG +
Preference number: 2 (lower is better)
Translates to: KKWNFQNFCTGNYYL*ACSSDCLPSDSMHL
Trigger: CAGGTGCATCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR CAA 90 bp CAGAATGAGGTGTATGGGCTAAGAGATGTCCTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGGATGACAGTGGTTGACAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: QNEVYGLRDVLLSLN*KNEMVWMTVVDSQD
Trigger: ATCTTGGCTGTCAACCACTGTCATCCATACCATTTCATTCTTCAAATTCAGGCTCAACAGGACATCTCTTAGCCCATACACCTCATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR TCA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 2 (lower is better)
Translates to: EIARLPRKLPKGYALECLRRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCTTTCCTATAAATCTATaGACGTCTTCAGGACACATG +
Preference number: 2 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCFPINL*TSSGHM
Trigger: CATGTGTCCTGAAGACGTTCATAGATTTATAGGAAA...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGTTTCTCTGCCCATGCTaGTGTACTGCTCATTTGTGC +
Preference number: 2 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRFLCPC*CTAHLC
Trigger: GCACAAATGAGCAGTACATCAGCATGGGCAGAGAAA...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGTTACCAAAAGGCTATaGTCTGGAATGTCTTTTTAT +
Preference number: 2 (lower is better)
Translates to: LPKPLRLASKVTEQPKADVTKRL*SGMSFY
Trigger: ATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAAC...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CAA 90 bp GAGAAGAAAGAGATCTTTGTCCTGTATTTGAACAATGATATCCCATaGATTGCAGATGAGGCAGGGTATGCACAGAATGAGGTGTATGGG +
Preference number: 2 (lower is better)
Translates to: EKKEIFVLYLNNDIP*IADEAGYAQNEVYG
Trigger: CCCATACACCTCATTCTGTGCATACCCTGCCTCATCTGCAATCAATGGGATATCATTGTTCAAATACAGGACAAAGATCTCTTTCTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR TCA 90 bp AGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTACGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 2 (lower is better)
Translates to: SGISRTFVLAIIISWLAVRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...TACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR-3UTR GCA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGC +
Preference number: 2 (lower is better)
Translates to: SISSATGIKVFRRHQNLVGNKRA*CIHTQS
Trigger: GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCC...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp CTAAGAGATGTCCTGTTGAGCCTGAATTTGAAGAATGAAATGGTATGGATGACACACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 2 (lower is better)
Translates to: LRDVLLSLNLKNEMVWMTHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...TGTCATCCATACCATTTCATTCTTCAAATTCAGGCTCAACAGGACATCTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR CCA 90 bp ATGAGGTCACCATGGATGCATATGTTTGTGGGATGGAGCAAATCAAACTTCTCTGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 2 (lower is better)
Translates to: MRSPWMHMFVGWSKSNFSAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...AGAGAAGTTTGATTTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR TCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTT +
Preference number: 2 (lower is better)
Translates to: ARLPRKLPKGYALECLFINLPKA*GGGMLL
Trigger: AAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATT...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp CTTGGGAGAATAAAGTCCCTGAATCTTCACTACTTCAAGAACATATCAGAGATGACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: LGRIKSLNLHYFKNISEMTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...CATCTCTGATATGTTCTTGAAGTAGTGAAGATTCAGGGACTTTATTCTCCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR GCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCAACAAGAGAGCCTGCTaGATTCACACTCAAAGCACC +
Preference number: 2 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEINKRAC*IHTQST
Trigger: GGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTT...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp GGTCGTAAATATCGATCATCTGCTGTCCCAATAAACATTTGTAGATTTATTGGCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 2 (lower is better)
Translates to: GRKYRSSAVPINICRFIGSRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...GCCAATAAATCTACAAATGTTTATTGGGACAGCAGATGATCGATATTTACGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562171.1
3UTR-3UTR CCA 90 bp TTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 2 (lower is better)
Translates to: FQNFCTGNYYLLACSSDCAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR-3UTR CCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGGAAGGCATCAAAATTTaGTGCATAGCAACTCTGGAT +
Preference number: 2 (lower is better)
Translates to: FLKLFSAMFLCASPVSRREGIKI*CIATLD
Trigger: ATCCAGAGTTGCTATGCACCAAATTTTGATGCCTTC...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR TCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGTTTCCTATAAATCTATaGACGTCTTCAGGACACATG +
Preference number: 2 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRFPINL*TSSGHM
Trigger: CATGTGTCCTGAAGACGTTCATAGATTTATAGGAAA...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCTCAGGTTATCACTTCTaGATGTGCTCAGAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGSGYHF*MCSEPS
Trigger: AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGA...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CCA 90 bp GGTCGTAAATATCGATCATCTGCTGTCCCAATAAACATTTGTAGATTTATTGGCGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 2 (lower is better)
Translates to: GRKYRSSAVPINICRFIGAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...GCCAATAAATCTACAAATGTTTATTGGGACAGCAGATGATCGATATTTACGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR-3UTR GCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATATCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: ARLPRKLPKGYALECLFISNSLC*SCSFAK
Trigger: TTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGA...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR GCA 90 bp TTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 2 (lower is better)
Translates to: FQNFCTGNYYLLACSSDCVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR CAA 90 bp TTTCTGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATaGCGGAGTTTCAAAATACCTGCACAATCAATACTGGCTGACATA +
Preference number: 2 (lower is better)
Translates to: FLPISVSPFRSSISE*RSFKIPAQSILADI
Trigger: TATGTCAGCCAGTATTGATTGTGCAGGTATTTTGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR-3UTR CCA 90 bp TACACGAAACACAAGTCGTACTCTAGTATTCTTTCTGCCAATATCAGTTTCTCCCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 2 (lower is better)
Translates to: YTKHKSYSSILSANISFSLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...GGAGAAACTGATATTGGCAGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR CCA 72 bp CAGGCCCAGAAGAGGTCTGGTGATAATGGCTGGCCCTaGGTGGGGATAGTTTACACCCGGGCAGCAGCACCA +
Preference number: 3 (lower is better)
Translates to: QAQKRSGDNGWP*VGIVYTRAAAP
Trigger: TGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTTCTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 72 bp CTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAATCTGGGACATGTCTCT +
Preference number: 3 (lower is better)
Translates to: LRTREGSLPAHP*SLGNRNLGHVS
Trigger: AGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR CCA 72 bp CCTGAGGTGGAGGAATGCTACTTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCAGACCTGAAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: PEVEECYFPHKW*VPLLAPDLKAA
Trigger: TGCAGCCTTCAGGTCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR CCA 72 bp AGGCCTGAGGTGGAGGAATGCTACTTTCCCCACAAATaGTGGGTCCCACTCCTGGCCCCAGACCTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: RPEVEECYFPHK*WVPLLAPDLKA
Trigger: AGCCTTCAGGTCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CAA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACACTGCTGGGCCCTGCCTaGGACACCAGTCTCACCAGC +
Preference number: 3 (lower is better)
Translates to: LQSPGITASGLQPAHCLTLLGPA*DTSLTS
Trigger: GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAG...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCACTAGCACGTGCCCAGTaGCTCAGTGCTGCTAGTAGA +
Preference number: 3 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRALARAQ*LSAASR
Trigger: TCTACTAGCAGCACTGAGCAACTGGGCACGTGCTAG...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACGGCAGATGCTTCTGTTaGGAAAAGGTTCTACGACCA +
Preference number: 3 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHGRCFC*EKVLRP
Trigger: TGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCC...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 72 bp ACACCAGTCTCACCAGCAGCAGCACCAGGGTGTCTTTaGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGC +
Preference number: 3 (lower is better)
Translates to: TPVSPAAAPGCL*CGGSGYHFWMC
Trigger: GCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGCTGCTGCTGGTGAGACTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCCGAGAGGCCAACTTCTaGCCCCTCCAAAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASREANF*PLQRKL
Trigger: CAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCG...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAAGGGCACAAAGGGTATaGCAAGGGGAACTCTTGCAA +
Preference number: 3 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRARAQRV*QGELLQ
Trigger: TTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCT...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 72 bp CATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTaGCCCTCCAAAGGAAGCTGTGGGCGTCCAACCACA +
Preference number: 3 (lower is better)
Translates to: HFSGMSTERPTS*PSKGSCGRPTT
Trigger: TGTGGTTGGACGCCCACAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 72 bp GGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTaGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGT +
Preference number: 3 (lower is better)
Translates to: GCLWCGGSGYHF*MCSEPSGEKAG
Trigger: ACCAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 72 bp AGTCTCACCAGCAGCAGCACCAGGGTGTCTTTGGTGTaGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGA +
Preference number: 3 (lower is better)
Translates to: SLTSSSTRVSLV*RVRLSLLDVLR
Trigger: TCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGCTGCTGCTGGTGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCTGAAGGCTGCAGAGTaGGAAACCCAAGGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSLKAAE*ETQGPR
Trigger: CCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CAA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 3 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 3 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
3UTR-3UTR CAA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCTGAAGGCTGCAGAGTaGGAAACCCAAGGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCLKAAE*ETQGPR
Trigger: CCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR TCA 72 bp GAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACACAAGGCTGCAGTAAGC +
Preference number: 3 (lower is better)
Translates to: ELETQGPRRETC*EVGGGHKAAVS
Trigger: GCTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR TCA 72 bp TACTTCCTCATCCTGAGTCAACAGCTCCTAACCTACTaGCAACAGGTGGTGGGCAATAGGCCAGCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: YFLILSQQLLTY*QQVVGNRPAPF
Trigger: AAAGGGAGCTGGCCTATTGCCCACCACCTGTTGTCAGTAGGTTAGGAGCTGTTGACTCAGGATGAGGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 72 bp CTTCACAACAGGATGTCCCCCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGTTTCATAATGGGCTCG +
Preference number: 3 (lower is better)
Translates to: LHNRMSPSRCFY*PSATFSFIMGS
Trigger: CGAGCCCATTATGAAACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACTGGGGGACATCCTGTTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562171.1
3UTR CCA 72 bp GTACTGCTCATTTGTGCTTTAGCTCTGCACACAGCCTaGCCTCTAGCTAGAGTTAGAACTGCAAAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: VLLICALALHTA*PLARVRTAKLP
Trigger: AGGCAGCTTTGCAGTTCTAACTCTAGCTAGAGGCCAGGCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp ACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGAATATGAGGAAGTTCTaGAGCAGACCGCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: TGNYYLLACSSDCLPSDSNMRKF*SRPLGW
Trigger: CCAGCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...CGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568466.6
3UTR TCA 72 bp ACTCTCATCTCTACACTGCAACTGTGGCAGATGGGATaGGGTCACCATGGATGCATATGTTTGTGGGATGGA +
Preference number: 3 (lower is better)
Translates to: TLISTLQLWQMG*GHHGCICLWDG
Trigger: TCCATCCCACAAACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 72 bp GGCTATCTGCAGAGAAAGGACTTTTCCACTGGGCTGTaGGATGTGTACACGAAACACAAGTCGTACTCTAGT +
Preference number: 3 (lower is better)
Translates to: GYLQRKDFSTGL*DVYTKHKSYSS
Trigger: ACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAAGTCCTTTCTCTGCAGATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR CCA 72 bp CTAACACTCTCATCTCTACACTGCAACTGTGGCAGATaGGATGAGGTCACCATGGATGCATATGTTTGTGGG +
Preference number: 3 (lower is better)
Translates to: LTLSSLHCNCGR*DEVTMDAYVCG
Trigger: CCCACAAACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 72 bp TTGCATAGGCTGATAGGAAGACCCCACAGGAGGTGTTaGTGTGACTTGAAAAGGCTGGTGTACAATTGGAGA +
Preference number: 3 (lower is better)
Translates to: LHRLIGRPHRRC*CDLKRLVYNWR
Trigger: TCTCCAATTGTACACCAGCCTTTTCAAGTCACACCAACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 72 bp CAGACCAATGGTTGCAAAGTTAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCACAGTTGCCCCATCAGG +
Preference number: 3 (lower is better)
Translates to: QTNGCKVRLSIF*FRFNAHSCPIR
Trigger: CCTGATGGGGCAACTGTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCTAACTTTGCAACCATTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR CAA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 3 (lower is better)
Translates to: GRPESFQAINRMADKPSMAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGCTGCTCCTGTTCTTTaGCCAAATCTACCCAAGGCC +
Preference number: 3 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIAAPVL*PNLPKA
Trigger: GGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGACTCGGGTACCTCCTTaGGTAGACAGCAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SISSATGIKVFRRHQNLVTRVPP*VDSRLQ
Trigger: CTGCAGCCTGCTGTCTACCAAAGGAGGTACCCGAGT...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 72 bp CAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTG +
Preference number: 3 (lower is better)
Translates to: QSSFPQSSNSLC*SCSFAKSTQGL
Trigger: CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 72 bp CACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGCACCCATCATATAAAA +
Preference number: 3 (lower is better)
Translates to: HLQKQHLGNKRA*CIHTQSTHHIK
Trigger: TTTTATATGATGGGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 72 bp ACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATaGTTCTGTTTGGAAAAGGTTCTACGACCAGATGAC +
Preference number: 3 (lower is better)
Translates to: TGFKGHRTAKGR*FCLEKVLRPDD
Trigger: GTCATCTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 72 bp GTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTaGGGAAAAGGCTGGTTTTTAGATCATACAGACAGG +
Preference number: 3 (lower is better)
Translates to: VRLSLLDVLRAF*GKGWFLDHTDR
Trigger: CCTGTCTGTATGATCTAAAAACCAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 72 bp TACACTGCAACTGTGGCAGATGGGATGAGGTCACCATaGATGCATATGTTTGTGGGATGGAGCAAATCAAAC +
Preference number: 3 (lower is better)
Translates to: YTATVADGMRSP*MHMFVGWSKSN
Trigger: GTTTGATTTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR CAA 90 bp CTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGAGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 3 (lower is better)
Translates to: LAIIISWLAVATVFPVIRGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...TCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR GCA 72 bp AAGCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGC +
Preference number: 3 (lower is better)
Translates to: KQSSFPQSSNSL*CSCSFAKSTQG
Trigger: GCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR GCA 72 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTaGATTCACACTCAAAGCACCCATCATATAAAAGTA +
Preference number: 3 (lower is better)
Translates to: LQKQHLGNKRAC*IHTQSTHHIKV
Trigger: TACTTTTATATGATGGGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
3UTR CCA 72 bp AAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTaGAAAAGGTTCTACGACCAGATGACACAAACAGGA +
Preference number: 3 (lower is better)
Translates to: KVTEQPKADASV*KRFYDQMTQTG
Trigger: TCCTGTTTGTGTCATCTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 72 bp ATATGCTGTTCTTTACTAACACTCTCATCTCTACACTaGAACTGTGGCAGATGGGATGAGGTCACCATGGAT +
Preference number: 3 (lower is better)
Translates to: ICCSLLTLSSLH*NCGRWDEVTMD
Trigger: ATCCATGGTGACCTCATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAGTGTTAGTAAAGAACAGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CCA 72 bp TTACCCAGGGTCCTGAGGGAAAAAGCAATTTCAACATaGAGCCAGTATGGAGAGATTGCAAGATTACCTAGA +
Preference number: 3 (lower is better)
Translates to: LPRVLREKAIST*SQYGEIARLPR
Trigger: TCTAGGTAATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR-3UTR CAA 90 bp AGCAAATCAAACTTCTCTGTCCTGACAGTACACTGTCATGTGAACACCCTGAATGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 3 (lower is better)
Translates to: SKSNFSVLTVHCHVNTLNGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...ATTCAGGGTGTTCACATGACAGTGTACTGTCAGGACAGAGAAGTTTGATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR GCA 72 bp TCAGAGATGAACTTACCATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCT +
Preference number: 3 (lower is better)
Translates to: SEMNLPSSKVMS*RPMVAKLGSRS
Trigger: AGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGGTAAGTTCATCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR CAA 90 bp TTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 3 (lower is better)
Translates to: FQNFCTGNYYLLACSSDCGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR-3UTR CAA 90 bp TTTGTGGGATGGAGCAAATCAAACTTCTCTGTCCTGACAGTACACTGTCATGTGCTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 3 (lower is better)
Translates to: FVGWSKSNFSVLTVHCHVLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...CACATGACAGTGTACTGTCAGGACAGAGAAGTTTGATTTGCTCCATCCCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR TCA 72 bp ATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGTaGCTCTTAAAACCTTCCCATCTGGAGTCCTGTATT +
Preference number: 3 (lower is better)
Translates to: INRMADKPSMPV*LLKPSHLESCI
Trigger: AATACAGGACTCCAGATGGGAAGGTTTTAAGAGTCACACTGGCATGGAAGGCTTATCTGCCATTCTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR GCA 72 bp GTTCTTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTaGATCTCCAGTAAGCAGAAGGCTACCCATTCCATT +
Preference number: 3 (lower is better)
Translates to: VLFKAVFSHVSL*ISSKQKATHSI
Trigger: AATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CCA 72 bp ATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGA +
Preference number: 3 (lower is better)
Translates to: ISRTFVLAIIIS*LAVATVFPVIR
Trigger: TCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR CCA 72 bp GTCCTGTTGAGCCTGAATTTGAAGAATGAAATGGTATaGATGACAGTGGTTGACAGCCAAGATTCACTAAAC +
Preference number: 3 (lower is better)
Translates to: VLLSLNLKNEMV*MTVVDSQDSLN
Trigger: GTTTAGTGAATCTTGGCTGTCAACCACTGTCATCCATACCATTTCATTCTTCAAATTCAGGCTCAACAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR-3UTR CAA 90 bp TGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 3 (lower is better)
Translates to: WNFQNFCTGNYYLLACSSGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...GCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR-3UTR CAA 90 bp CTTGGGAGAATAAAGTCCCTGAATCTTCACTACTTCAAGAACATATCAGAGATGAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: LGRIKSLNLHYFKNISEMNNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...CATCTCTGATATGTTCTTGAAGTAGTGAAGATTCAGGGACTTTATTCTCCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR TCA 72 bp CAACCATTTCATGACCTCCATTTACAGAACAACTGTTaGTACTGTACTTCTCAATATGAGGAAGTTCTTGAG +
Preference number: 3 (lower is better)
Translates to: QPFHDLHLQNNC*YCTSQYEEVLE
Trigger: CTCAAGAACTTCCTCATATTGAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGAGGTCATGAAATGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000568466.6
3UTR TCA 72 bp GCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTaGATTGCGGAGTTTCAAAATACCTGCACAATCAAT +
Preference number: 3 (lower is better)
Translates to: ANISFSFSKFYI*IAEFQNTCTIN
Trigger: ATTGATTGTGCAGGTATTTTGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
3UTR GCA 72 bp TATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTGCACAATCAATACTGG +
Preference number: 3 (lower is better)
Translates to: YQFLLFEVLYLN*GVSKYLHNQYW
Trigger: CCAGTATTGATTGTGCAGGTATTTTGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR GCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPAGGEPA*SPLLLG
Trigger: CCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCC...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACCTCGGGAGGGGAGCCTaGCTGCTCACCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNLGRGA*LLTPAP
Trigger: AGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAG...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAARRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCAGCCGCCCGCCACCGGTaGCTAAGCCTCCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAAAARHR*LSLHCR
Trigger: CCGACAGTGGAGGCTTAGGCACCGGTGGCGGGCGGC...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346183.8
CDS-3UTR TCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTCTTCCCCTGGGGGAGTaGCCAGGTGAAGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPALPLGE*PGEGTG
Trigger: ACCTGTTCCTTCACCTGGTCACTCCCCCAGGGGAAG...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPGGEPA*SPLLLG
Trigger: CCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCC...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCACTTCCCCTGGGGGAGTaGCCAGGTGAAGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: AGCSFCWALPWTPVSPAALPLGE*PGEGTG
Trigger: ACCTGTTCCTTCACCTGGTCACTCCCCCAGGGGAAG...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACGTTTCTGCTGGGCCCTaGCTTGGACACCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNVSAGP*LGHQSH
Trigger: GTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAAC...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCCTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLLNAAS*RAARAK
Trigger: CTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAG...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCGGCTGCAGTTTCTGCTaGGCCCTGCCTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTGCSFC*ALPWTP
Trigger: TGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCC...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACCCTTCTACCTCCCACTaGGGTCGTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNPSTSH*GRPSCP
Trigger: AGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGG...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTCTGTGGCAGATGGGATaGGGTCACCATGGATGCATA +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPALWQMG*GHHGCI
Trigger: TATGCATCCATGGTGACCTCATCCCATCTGCCACAG...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTCACATGCTGACTTTCTaGGGCATAGGTGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPAHMLTF*GIGVGL
Trigger: CAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTG...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTGGEPA*SPLLLG
Trigger: CCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCC...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACTCGGGAGGGGAGCCTaGCTGCTCACCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSLGRGA*LLTPAP
Trigger: AGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGACGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRRGPGC*SSSSGG
Trigger: GCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACG...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAAGTCGAGCTCGTCGTaGGCGCCACAGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSKSSSS*APQFAV
Trigger: TACTGCAAACTGTGGCGCCCACGACGAGCTCGACTT...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCAAGGCCTGACCCACCATaGACAGAAGCATTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AGCSFCWALPWTPVSPAARPDPP*TEALSH
Trigger: GTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCT...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACCTGTGGCAGATGGGATaGGGTCACCATGGATGCATA +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNLWQMG*GHHGCI
Trigger: TATGCATCCATGGTGACCTCATCCCATCTGCCACAG...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCTCGGGAGGGGAGCCTaGCTGCTCACCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSLGRGA*LLTPAP
Trigger: AGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGACTGTCACACTTCCCCTaGGGGAGTGACCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRLSHFP*GSDQVK
Trigger: CTTCACCTGGTCACTCCCCCAGGGGAAGTGTGACAG...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTCGAAATATAGGGGTGTaGCCAGGCTTTGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPARNIGV*PGFGLL
Trigger: GAGCAAACCAAAGCCTGGCCACACCCCTATATTTCG...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCGTCTGGCCATTTCTCTaGAATGTCAACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSVWPFL*NVNREA
Trigger: GGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGAC...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCCCCGTACTTTGTGCTTaGGTTGAGTGCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSPVLCA*VECCPE
Trigger: TTCTGGACAGCACTCAACTCAAGCACAAAGTACGGG...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACCAGCTCCTAACCTACTaGCAACAGGTGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHQLLTY*QQVVGN
Trigger: ATTGCCCACCACCTGTTGTCAGTAGGTTAGGAGCTG...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCACTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPLNAAS*RAARAK
Trigger: CTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAG...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFRGPGC*SSSSGG
Trigger: GCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACG...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCRRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACGGATGCACAATCATCTaGCTCAAGATCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHGCTII*LKICRP
Trigger: CGGCCTGCAGATCTTGAGCCAGATGATTGTGCATCC...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTGGCAAGGAGATTGCCTaGGTGATAATGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPAGKEIA*VIMSVQ
Trigger: TTGGACACTCATTATCACCCAGGCAATCTCCTTGCC...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCTGGATCTAGGAGAGTaGCAAGGAGATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTLDLGE*QGDCLG
Trigger: ACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAG...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACGCACCAGGGTGTCTTTaGTGTGGAGGGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHAPGCL*CGGSGY
Trigger: ATAACCTGACCCTCCACACCAAAGACACCCTGGTGC...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCTTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASFRSES*PRAEQH
Trigger: GTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAA...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCCCCTGGGGGAGTaGCCAGGTGAAGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSLPLGE*PGEGTG
Trigger: ACCTGTTCCTTCACCTGGTCACTCCCCCAGGGGAAG...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCTTCCCCTGGGGGAGTaGCCAGGTGAAGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTLPLGE*PGEGTG
Trigger: ACCTGTTCCTTCACCTGGTCACTCCCCCAGGGGAAG...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTGGTGTTGGTGTGACTTaGAAAGGCTGGTGTACAATT +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPAGVGVT*KGWCTI
Trigger: AATTGTACACCAGCCTTTTCAAGTCACACCAACACC...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACAGCTGCCTAAACCACTaGGACTGGCTTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHSCLNH*DWLQRS
Trigger: TGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAGCT...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCACCTTCCATGCCAGTGTaGCTCTTAAAACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AGCSFCWALPWTPVSPAAPSMPV*LLKPSH
Trigger: ATGGGAAGGTTTTAAGAGTCACACTGGCATGGAAGG...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSVGATV*SSHRRG
Trigger: GCCACGCCGATGACTACTGCAAACTGTGGCGCCCAC...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAATCTGGCTCAAGATCTaGAGGCCGCGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIIWLKI*RPRARG
Trigger: CCCCCGGGCTCGCGGCCTGCAGATCTTGAGCCAGAT...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAATCTGGCTCAAGATCTaGAGGCCGCGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKAIWLKI*RPRARG
Trigger: CCCCCGGGCTCGCGGCCTGCAGATCTTGAGCCAGAT...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAGTGCTGTCCAGAATaGATTCTGGTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPECCPE*ILVAGD
Trigger: GTCTCCAGCCACCAGAATGCATTCTGGACAGCACTC...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAGGAGGGGAGCCTGCCTaGTCACCCCTGCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPGGEPA*SPLLLG
Trigger: CCCAAGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCC...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNSSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCAGTAACCAGGTCACCTaGAAAAGCAGCACCTCGGAA +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTSNQVT*KSSTSE
Trigger: TTCCGAGGTGCTGCTTTTGCAGGTGACCTGGTTACT...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACTGAGGAGCCTCAACTaGTGGCTCTTCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAALRSLN*WLFFPL
Trigger: CAAAGGGAAGAAGAGCCAGCAGTTGAGGCTCCTCAG...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGACGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LAIIISWLAVATVFPVIRRGPGC*SSSSGG
Trigger: GCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACG...TCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACATCCCACAGGGGGATGTaGGCCTTGATGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITSHRGM*ALMRVL
Trigger: CAGGACCCTCATCAAGGCCCACATCCCCCTGTGGGA...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTTGCAGCTGTAACTGCTaGGTTATGATATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPACSCNC*VMIWRN
Trigger: GTTCCTCCATATCATAACCCAGCAGTTACAGCTGCA...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCAGGGATGAGAAGCTGCTaGGGAAGCTGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAAGMRSC*GSCCSR
Trigger: TCTGCTACAACAGCTTCCCCAGCAGCTTCTCATCCC...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGGGCCTGCAGTCTCCTaGAATAACAGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAGPAVS*NNSIRP
Trigger: AGGCCTGATGCTGTTATTCCAGGAGACTGCAGGCCC...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGTCTGGCCATTTCTCTaGAATGTCAACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPVWPFL*NVNREA
Trigger: GGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGAC...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACGCCAAAGACGAGTTTaGAGTCGAGCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSRQRRV*SRARRG
Trigger: CCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACCCAAGTCCATACTGTTaGTGCCAAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNPSPYC*CQVSSP
Trigger: TGGAGAAGAAACTTGGCATCAACAGTATGGACTTGG...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCATGGACAGAAGCATTaGGCCACGTATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTHGQKH*ATYLLS
Trigger: TGACAGAAGATACGTGGCTCAATGCTTCTGTCCATG...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACAGGAGGTGTTGGTGTaGCTTGAAAAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAAQEVLV*LEKAGV
Trigger: TACACCAGCCTTTTCAAGTCACACCAACACCTCCTG...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGACCCATCAGGTGGAAATaGCGCTGGATCACACAAACT +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRPIRWK*RWITQT
Trigger: AGTTTGTGTGATCCAGCGTCATTTCCACCTGATGGG...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRRRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTT +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRNLPKA*GGGMLL
Trigger: AAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATT...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCTCACATCATCTAAAGTaGTGTCCTGCAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSSHHLK*CPADQW
Trigger: CCATTGGTCTGCAGGACATCACTTTAGATGATGTGA...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346183.8
CDS-3UTR GCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASVGATV*SSHRRG
Trigger: GCCACGCCGATGACTACTGCAAACTGTGGCGCCCAC...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCATCTGGCTCAAGATCTaGAGGCCGCGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPIWLKI*RPRARG
Trigger: CCCCCGGGCTCGCGGCCTGCAGATCTTGAGCCAGAT...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCTCGGGAGGGGAGCCTaGCTGCTCACCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCLGRGA*LLTPAP
Trigger: AGGAGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAG...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTTCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPASNSLC*SCSFAK
Trigger: TTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGA...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACAGTGCGTACTAGCACGTaGCCAGTTGCTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITVRTST*PVAQCC
Trigger: GCAGCACTGAGCAACTGGGCACGTGCTAGTACGCAC...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GTGGTTGACAGCCAAGATTCACTAAACCAGAAAGAGTTGCATCCTGCTGAAACACTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VVDSQDSLNQKELHPAETLNAAS*RAARAK
Trigger: CTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAG...TGTTTCAGCAGGATGCAACTCTTTCTGGTTTAGTGAATCTTGGCTGTCAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGCGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVRRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR GCA 90 bp AATATGAGGAAGTTCTTGAGCAGACCGCTGGGAGCACTCAACGGGTATAGAGGCCCGCCCAGGCTGGAGTaGAATGGCGCGATCTTAGCT +
Preference number: 4 (lower is better)
Translates to: NMRKFLSRPLGALNGYRGPPRLE*NGAILA
Trigger: AGCTAAGATCGCGCCATTGCACTCCAGCCTGGGCGG...GCCTCTATACCCGTTGAGTGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCGGGATGAGGTCACCATaGATGCATATGTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTGMRSP*MHMFVG
Trigger: TCCCACAAACATATGCATCCATGGTGACCTCATCCC...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCACCAGGGTGTCTTTaGTGTGGAGGGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAAPGCL*CGGSGY
Trigger: ATAACCTGACCCTCCACACCAAAGACACCCTGGTGC...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPFRSES*PRAEQH
Trigger: GTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
3UTR CAA 72 bp CCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTaGCCCCTCCAAAGGAAGCTGTGGGCGTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: PFLWNVNREANF*PLQRKLWASNH
Trigger: GTGGTTGGACGCCCACAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGCGCCAAAGACGAGTTTaGAGTCGAGCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGRQRRV*SRARRG
Trigger: CCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCG...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AATATGAGGAAGTTCTTGAGCAGACCGCTGGGAGCACTCAACGGGTATAGAGGCCGCCAAAGACGAGTTTaGAGTCGAGCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: NMRKFLSRPLGALNGYRGRQRRV*SRARRG
Trigger: CCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCG...GCCTCTATACCCGTTGAGTGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTGGAACTGAAAGAAACTaGTCACCACATGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PKSRDSGLGRGACLLTPAGTERN*SPHESF
Trigger: GAAAGATTCATGTGGTGATCAGTTTCTTTCAGTTCC...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCAATGGATGACAGTGGTTaGCAGCCAAGATTCACTAAA +
Preference number: 4 (lower is better)
Translates to: AGCSFCWALPWTPVSPAAMDDSG*QPRFTK
Trigger: TTTAGTGAATCTTGGCTGTCAACCACTGTCATCCAT...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCTGGCCCAGAAAGCGGTaGACTAGCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLWPRKR*TSQGMR
Trigger: TCTCATCCCTTGGCTAGTTCACCGCTTTCTGGGCCA...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCATGGCCCAGAAAGCGGTaGACTAGCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSWPRKR*TSQGMR
Trigger: TCTCATCCCTTGGCTAGTTCACCGCTTTCTGGGCCA...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGGGTCATCATCTAAAGTaGTGTCCTGCAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLGHHLK*CPADQW
Trigger: CCATTGGTCTGCAGGACATCACTTTAGATGATGACC...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR TCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACGAGGCTTTTAATTCTTaGGGGCACAAAGGGTATTGC +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHEAFNS*GHKGYC
Trigger: GCAATACCCTTTGTGCCCTCAAGAATTAAAAGCCTC...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGACTCTCATCTCTACACTaGAACTGTGGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRLSSLH*NCGRWD
Trigger: ATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAG...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCACTGCTCCTGTTCTTTTaGCAAATCTACCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPLLLFF*QIYPRP
Trigger: AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAG...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGGCAAGGAGATTGCCTaGGTGATAATGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPGKEIA*VIMSVQ
Trigger: TTGGACACTCATTATCACCCAGGCAATCTCCTTGCC...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTGTCACACTTCCCCTaGGGGAGTGACCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFLSHFP*GSDQVK
Trigger: CTTCACCTGGTCACTCCCCCAGGGGAAGTGTGACAG...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGGTGTGGCCAGGCTTTaGTTTGCTCCAGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: LWCGGSGYHFWMCSEPSGGVARL*FAPGKG
Trigger: CCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACC...CCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCTTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASFPHKW*VPLLAP
Trigger: TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAA...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCTTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFFPHKW*VPLLAP
Trigger: TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAA...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAGGGCCTGCAGTCTCCTaGAATAACAGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTGPAVS*NNSIRP
Trigger: AGGCCTGATGCTGTTATTCCAGGAGACTGCAGGCCC...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACCTACTGACAACAGGTaGTGGGCAATAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSPTDNR*WAIGQL
Trigger: GAGCTGGCCTATTGCCCACCACCTGTTGTCAGTAGG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAACCTACTGACAACAGGTaGTGGGCAATAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEPTDNR*WAIGQL
Trigger: GAGCTGGCCTATTGCCCACCACCTGTTGTCAGTAGG...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATCTCCAAAGGAAGCTGTaGGCGTCCAACCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPKPLRLASKVTEQPKADLQRKL*ASNHRP
Trigger: GGGCCTGTGGTTGGACGCCCACAGCTTCCTTTGGAG...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGATTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAIIISWLAVATVFPVIRFRSES*PRAEQH
Trigger: GTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAA...TCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAGGATGCACAATCATCTaGCTCAAGATCACACACACG +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRGCTII*LKITHT
Trigger: CGTGTGTGTGATCTTGAGCCAGATGATTGTGCATCC...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562926.5
CDS-3UTR TCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGTCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLSHCPK*AGKGQS
Trigger: AGACTGGCCTTTACCAGCTCATTTTGGACAATGTGA...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCCCCTGGCCCGTACTTTGTGCTTGAGTTGAGTGCTGTCCAGAATGCATTCTGGCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: PPGPYFVLELSAVQNAFWRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...CCAGAATGCATTCTGGACAGCACTCAACTCAAGCACAAAGTACGGGCCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCCCTTCTACCTCCCACTaGGGTCGTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASPSTSH*GRPSCP
Trigger: AGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGG...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGACCTTCTACCTCCCACTaGGGTCGTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRPSTSH*GRPSCP
Trigger: AGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGG...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCTGGCCCAGAAAGCGGTaGACTAGCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASWPRKR*TSQGMR
Trigger: TCTCATCCCTTGGCTAGTTCACCGCTTTCTGGGCCA...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCGGTTCTACGACCAGATaGCACAAACAGGAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLGSTTR*HKQEAH
Trigger: GTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACC...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGCCACAGTGATCTGCTaGAGAATAGACCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPATVIC*RIDLFL
Trigger: GAGAAAAAGGTCTATTCTTCAGCAGATCACTGTGGC...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTATGCAATAACCTCATGTaGGGCAGCTACACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLCNNLM*GSYTRG
Trigger: GCCCCTGGTGTAGCTGCCTCACATGAGGTTATTGCA...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCACAGCAGCACCACACATaGACCCAAAGACATGTTCTT +
Preference number: 4 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAQQHHT*TQRHVL
Trigger: AAGAACATGTCTTTGGGTTCATGTGTGGTGCTGCTG...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACAGAGTGCTGTCCAGAATaGATTCTGGTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITECCPE*ILVAGD
Trigger: GTCTCCAGCCACCAGAATGCATTCTGGACAGCACTC...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGAGTGCTGTCCAGAATaGATTCTGGTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLECCPE*ILVAGD
Trigger: GTCTCCAGCCACCAGAATGCATTCTGGACAGCACTC...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTLPAHP*SLGNRN
Trigger: ATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAG...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGGTGCGTACTAGCACGTaGCCAGTTGCTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLVRTST*PVAQCC
Trigger: GCAGCACTGAGCAACTGGGCACGTGCTAGTACGCAC...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACTGAGGAGCCTCAACTaGTGGCTCTTCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSLRSLN*WLFFPL
Trigger: CAAAGGGAAGAAGAGCCAGCAGTTGAGGCTCCTCAG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRLNAAS*RAARAK
Trigger: CTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAG...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGCGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GISRTFVLAIIISWLAVARGPGC*SSSSGG
Trigger: GCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACG...CGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR GCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAACGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQRRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp GGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGGCCGCCCGCCACCGGTaGCTAAGCCTCCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: GISRTFVLAIIISWLAVAAARHR*LSLHCR
Trigger: CCGACAGTGGAGGCTTAGGCACCGGTGGCGGGCGGC...CGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561714.5
ENST00000568466.6
CDS-3UTR GCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAGCCGCCCGCCACCGGTaGCTAAGCCTCCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQAARHR*LSLHCR
Trigger: CCGACAGTGGAGGCTTAGGCACCGGTGGCGGGCGGC...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCGGATGCACAATCATCTaGCTCAAGATCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSGCTII*LKICRP
Trigger: CGGCCTGCAGATCTTGAGCCAGATGATTGTGCATCC...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAACTGGATCTAGGAGAGTaGCAAGGAGATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGELDLGE*QGDCLG
Trigger: ACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAG...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGTCCCACAGGGGGATGTaGGCCTTGATGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLSHRGM*ALMRVL
Trigger: CAGGACCCTCATCAAGGCCCACATCCCCCTGTGGGA...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTTCCCACAGGGGGATGTaGGCCTTGATGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPSHRGM*ALMRVL
Trigger: CAGGACCCTCATCAAGGCCCACATCCCCCTGTGGGA...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCTCCCACAGGGGGATGTaGGCCTTGATGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: APWETEIWDMSLPIISFTSHRGM*ALMRVL
Trigger: CAGGACCCTCATCAAGGCCCACATCCCCCTGTGGGA...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR CCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTCCCACAGGGGGATGTaGGCCTTGATGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPSHRGM*ALMRVL
Trigger: CAGGACCCTCATCAAGGCCCACATCCCCCTGTGGGA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCACTGTCACACTTCCCCTaGGGGAGTGACCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKALSHFP*GSDQVK
Trigger: CTTCACCTGGTCACTCCCCCAGGGGAAGTGTGACAG...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGGCCTGACCCACCATaGACAGAAGCATTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSRPDPP*TEALSH
Trigger: GTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCT...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAGGGATGAGAAGCTGCTaGGGAAGCTGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTGMRSC*GSCCSR
Trigger: TCTGCTACAACAGCTTCCCCAGCAGCTTCTCATCCC...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAACAGAATGCATTCTGGTaGCTGGAGACGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEQNAFW*LETVMR
Trigger: CCTCATCACCGTCTCCAGCCACCAGAATGCATTCTG...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAGAATGCATTCTGGTaGCTGGAGACGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTQNAFW*LETVMR
Trigger: CCTCATCACCGTCTCCAGCCACCAGAATGCATTCTG...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGCTCTGCACACAGCCTaGCCTCTAGCTAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLALHTA*PLARVR
Trigger: TCTAACTCTAGCTAGAGGCCAGGCTGTGTGCAGAGC...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAGGCTGCAGTTTCTGCTaGGCCCTGCCTTGGACACCA +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPGCSFC*ALPWTP
Trigger: TGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCC...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAGATAATGGCTGGCCCTaGGTGGGGATAGTTTACACC +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSDNGWP*VGIVYT
Trigger: GGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGTTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVFRSES*PRAEQH
Trigger: GTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAA...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR TCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCGCCAAAGACGAGTTTaGAGTCGAGCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCRQRRV*SRARRG
Trigger: CCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACTTCTTTAAAGGATACTaGGATCCAAGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHFFKGY*DPRPSS
Trigger: AGATGATGGCCTTGGATCTCAGTATCCTTTAAAGAA...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: LWCGGSGYHFWMCSEPSGRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...CCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGCCCGTACTTTGTGCTTaGGTTGAGTGCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LWCGGSGYHFWMCSEPSGPVLCA*VECCPE
Trigger: TTCTGGACAGCACTCAACTCAAGCACAAAGTACGGG...CCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACGGATCACACAAACTGTaGCATATTAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHGSHKL*HIKDEG
Trigger: ACCTTCATCCTTAATATGTCACAGTTTGTGTGATCC...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSRRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTT +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSNLPKA*GGGMLL
Trigger: AAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATT...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGACAGCTCCTAACCTACTaGCAACAGGTGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRQLLTY*QQVVGN
Trigger: ATTGCCCACCACCTGTTGTCAGTAGGTTAGGAGCTG...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCVGATV*SSHRRG
Trigger: GCCACGCCGATGACTACTGCAAACTGTGGCGCCCAC...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPSKVMS*RPMVAK
Trigger: CTTTGCAACCATTGGTCTGCAGGACATCACTTTAGA...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSLPAHP*SLGNRN
Trigger: ATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTACTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLLPAHP*SLGNRN
Trigger: ATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAG...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTAGTAACCAGGTCACCTaGAAAAGCAGCACCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTSNQVT*KSSTSE
Trigger: TTCCGAGGTGCTGCTTTTGCAGGTGACCTGGTTACT...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAGTGCGTACTAGCACGTaGCCAGTTGCTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLVRTST*PVAQCC
Trigger: GCAGCACTGAGCAACTGGGCACGTGCTAGTACGCAC...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTCGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: EIARLPRKLPKGYALECLRGPGC*SSSSGG
Trigger: GCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACG...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTCGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ISRTFVLAIIISWLAVATRGPGC*SSSSGG
Trigger: GCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACG...AGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR GCA 90 bp CACAACCATTTCATGACCTCCATTTACAGAACAACTGTTGATACTGTACTTCTCCGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HNHFMTSIYRTTVDTVLLRRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...GAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGAGGTCATGAAATGGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000568466.6
CDS-3UTR CCA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATAAGTCGAGCTCGTCGTaGGCGCCACAGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LPKPLRLASKVTEQPKADKSSSS*APQFAV
Trigger: TACTGCAAACTGTGGCGCCCACGACGAGCTCGACTT...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAGGCACTCAAAGGGTTTaGGACCACCTAATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTGTQRV*DHLMGY
Trigger: ATAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCC...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCAACAAACTTCAGCACTaGAGTGCCTCCGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSNKLQH*SASVSH
Trigger: GTGGGAAACGGAGGCACTCCAGTGCTGAAGTTTGTT...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTCTGTCACACTTCCCCTaGGGGAGTGACCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLLSHFP*GSDQVK
Trigger: CTTCACCTGGTCACTCCCCCAGGGGAAGTGTGACAG...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAGGTGTGGCCAGGCTTTaGTTTGCTCCAGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIGVARL*FAPGKG
Trigger: CCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACC...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGAGGCTGGTGTACAATTaGAGAAGGAATCATATGCTG +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLRLVYN*RRNHML
Trigger: CAGCATATGATTCCTTCTCCAATTGTACACCAGCCT...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCGTCCAGAATGCATTCTaGTGGCTGGAGACGGTGATG +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFVQNAF*WLETVM
Trigger: CATCACCGTCTCCAGCCACCAGAATGCATTCTGGAC...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCACTGAGAAGTTGGTGGTaGACACAAGGCTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSLRSWW*TQGCSK
Trigger: CTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAG...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCATCAGGTTATCACTTCTaGATGTGCTCAGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRASGYHF*MCSEPS
Trigger: AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGA...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAGCACCAGGGTGTCTTTaGTGTGGAGGGTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRAPGCL*CGGSGY
Trigger: ATAACCTGACCCTCCACACCAAAGACACCCTGGTGC...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCACCTACTGACAACAGGTaGTGGGCAATAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EGTKGIARGTLAITSCEAPTDNR*WAIGQL
Trigger: GAGCTGGCCTATTGCCCACCACCTGTTGTCAGTAGG...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACATCTGGTGATAATGGCTaGCCCTGGGTGGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: LQSPGITASGLQPAHCLTSGDNG*PWVGIV
Trigger: AACTATCCCCACCCAGGGCCAGCCATTATCACCAGA...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTTTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIFRSES*PRAEQH
Trigger: GTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAA...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTTCTTCCTGCTGGGACTaGCCAAAACGTAGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTSSCWD*PKRRSQ
Trigger: TTGAGACCTACGTTTTGGCCAGTCCCAGCAGGAAGA...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACATGGACAGAAGCATTaGGCCACGTATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSHGQKH*ATYLLS
Trigger: TGACAGAAGATACGTGGCTCAATGCTTCTGTCCATG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAACATGGACAGAAGCATTaGGCCACGTATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEHGQKH*ATYLLS
Trigger: TGACAGAAGATACGTGGCTCAATGCTTCTGTCCATG...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCTTCTACCTCCCACTaGGGTCGTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GGHKAAVSTVRAHQIFLNPSTSH*GRPSCP
Trigger: AGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGG...ATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCCCTTCTACCTCCCACTaGGGTCGTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPPSTSH*GRPSCP
Trigger: AGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGG...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCACTTGACATTTTTCCCTaGTTATCTTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPLDIFP*LSSLLP
Trigger: AGGTAGAAGGGAAGATAATCAGGGAAAAATGTCAAG...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGCTGTGGCAGATGGGATaGGGTCACCATGGATGCATA +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLLWQMG*GHHGCI
Trigger: TATGCATCCATGGTGACCTCATCCCATCTGCCACAG...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGCTGTGGCAGATGGGATaGGGTCACCATGGATGCATA +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLLWQMG*GHHGCI
Trigger: TATGCATCCATGGTGACCTCATCCCATCTGCCACAG...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGACAGGAGGTGTTGGTGTaGCTTGAAAAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRQEVLV*LEKAGV
Trigger: TACACCAGCCTTTTCAAGTCACACCAACACCTCCTG...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTAGGGTATGCACAGAATaGGGTGTATGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTRVCTE*GVWAKR
Trigger: TCTCTTAGCCCATACACCTCATTCTGTGCATACCCT...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTGGCCCAGAAAGCGGTaGACTAGCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPWPRKR*TSQGMR
Trigger: TCTCATCCCTTGGCTAGTTCACCGCTTTCTGGGCCA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCCCGTACTTTGTGCTTaGGTTGAGTGCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSPVLCA*VECCPE
Trigger: TTCTGGACAGCACTCAACTCAAGCACAAAGTACGGG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGCCCATCAGGTGGAAATaGCGCTGGATCACACAAACT +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGPIRWK*RWITQT
Trigger: AGTTTGTGTGATCCAGCGTCATTTCCACCTGATGGG...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCCCATCAGGTGGAAATaGCGCTGGATCACACAAACT +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSPIRWK*RWITQT
Trigger: AGTTTGTGTGATCCAGCGTCATTTCCACCTGATGGG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAGGTCATCATCTAAAGTaGTGTCCTGCAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTGHHLK*CPADQW
Trigger: CCATTGGTCTGCAGGACATCACTTTAGATGATGACC...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR TCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGGTTCTACGACCAGATaGCACAAACAGGAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKAGSTTR*HKQEAH
Trigger: GTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACC...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCAGCTGCCTAAACCACTaGGACTGGCTTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFSCLNH*DWLQRS
Trigger: TGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAGCT...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACATTTCTCTGCCCATGCTaGTGTACTGCTCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITFLCPC*CTAHLC
Trigger: GCACAAATGAGCAGTACATCAGCATGGGCAGAGAAA...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGCCTTCCATGCCAGTGTaGCTCTTAAAACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LWCGGSGYHFWMCSEPSGPSMPV*LLKPSH
Trigger: ATGGGAAGGTTTTAAGAGTCACACTGGCATGGAAGG...CCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCACCTTCCATGCCAGTGTaGCTCTTAAAACCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSPSMPV*LLKPSH
Trigger: ATGGGAAGGTTTTAAGAGTCACACTGGCATGGAAGG...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGACTATCCACATTCTGTaGCACAACTCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLTIHIL*HNSLFK
Trigger: CTTGAAAAGTGAGTTGTGTCACAGAATGTGGATAGT...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TTTGTGGGATGGAGCAAATCAAACTTCTCTGTCCTGACAGTACACTGTCATGTGGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FVGWSKSNFSVLTVHCHVVGATV*SSHRRG
Trigger: GCCACGCCGATGACTACTGCAAACTGTGGCGCCCAC...CACATGACAGTGTACTGTCAGGACAGAGAAGTTTGATTTGCTCCATCCCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGTGGCAAGGAGATTaGCTGGGTGATAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSEWQGD*LGDNEC
Trigger: ACACTCATTATCACCCAGGCAATCTCCTTGCCACTC...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTGAGTGGCAAGGAGATTaGCTGGGTGATAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTEWQGD*LGDNEC
Trigger: ACACTCATTATCACCCAGGCAATCTCCTTGCCACTC...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLSRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCTTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCTCTTCTCTGTGTTCTTaGTTCATCAAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTSSLCS*FIKTGV
Trigger: TACACCAGTTTTGATGAAGCAAGAACACAGAGAAGA...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGCTGCAGACCAATGGTTaGAAAGTTAGGCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLLQTNG*KVRLSI
Trigger: GATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAG...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLSSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAAACAAGAGAGCCTGCTaGATTCACACTCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSNKRAC*IHTQST
Trigger: GGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTT...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACAGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITGNKRA*CIHTQS
Trigger: GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCC...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAGGGCACAAAGGGTATTaGAAGGGGAACTCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEGHKGY*KGNSCN
Trigger: ATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCC...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGGGCATCAAAATTTGGTaGATAGCAACTCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLGIKIW*IATLDH
Trigger: ATGATCCAGAGTTGCTATGCACCAAATTTTGATGCC...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTGCGGAGTTTCACTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CQYQFLLFEVLYLNCGVSLNAAS*RAARAK
Trigger: CTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAG...TGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR GCA 90 bp AAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTCTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KWNFQNFCTGNYYLLACSLNAAS*RAARAK
Trigger: CTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAG...ACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR GCA 90 bp GGTCGTAAATATCGATCATCTGCTGTCCCAATAAACATTTGTAGATTTATTGGCCGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GRKYRSSAVPINICRFIGRRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...GCCAATAAATCTACAAATGTTTATTGGGACAGCAGATGATCGATATTTACGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR GCA 90 bp GAAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCGGCGTGGCCCAGGGTaGTGCAGCTCCTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EEVEFPELLYWQLLSLGLRRGPG*CSSSSG
Trigger: GCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCG...CAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCAAGTCGAGCTCGTCGTaGGCGCCACAGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: APWETEIWDMSLPIISFTKSSSS*APQFAV
Trigger: TACTGCAAACTGTGGCGCCCACGACGAGCTCGACTT...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329524.8
CDS-3UTR CCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGAGACTCCCGGTAGGATaGCTCAAGAGGAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGRLPVG*LKRKIE
Trigger: CTCTATCTTCCTCTTGAGCCATCCTACCGGGAGTCT...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGACTCCCGGTAGGATaGCTCAAGAGGAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSRLPVG*LKRKIE
Trigger: CTCTATCTTCCTCTTGAGCCATCCTACCGGGAGTCT...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCGGCAAGGAGATTGCCTaGGTGATAATGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSGKEIA*VIMSVQ
Trigger: TTGGACACTCATTATCACCCAGGCAATCTCCTTGCC...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACTGTCACACTTCCCCTaGGGGAGTGACCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQLSHFP*GSDQVK
Trigger: CTTCACCTGGTCACTCCCCCAGGGGAAGTGTGACAG...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTAGGCCTGACCCACCATaGACAGAAGCATTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KPLRLASKVTEQPKADASRPDPP*TEALSH
Trigger: GTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCT...AGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGACCCACCATaGACAGAAGCATTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPRPDPP*TEALSH
Trigger: GTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCT...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCAGGCCTGACCCACCATaGACAGAAGCATTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFRPDPP*TEALSH
Trigger: GTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCT...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGGGTGTGGCCAGGCTTTaGTTTGCTCCAGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLGVARL*FAPGKG
Trigger: CCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACC...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGGTGTGGCCAGGCTTTaGTTTGCTCCAGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPGVARL*FAPGKG
Trigger: CCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACC...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: GCLWCGGSGYHFWMCSEPFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...AGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAATTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCATGCTGGGTTATGATATaGAGGAACTTCAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPCWVMI*RNFKDN
Trigger: ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCA...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAGGATGCATATGTTTGTaGGATGGAGCAAATCAAACT +
Preference number: 4 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRGCICL*DGANQT
Trigger: AGTTTGATTTGCTCCATCCCACAAACATATGCATCC...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTGGGATGAGGTCACCATaGATGCATATGTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTGMRSP*MHMFVG
Trigger: TCCCACAAACATATGCATCCATGGTGACCTCATCCC...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATACAGAATGCATTCTGGTaGCTGGAGACGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIQNAFW*LETVMR
Trigger: CCTCATCACCGTCTCCAGCCACCAGAATGCATTCTG...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGGTCCAGAATGCATTCTaGTGGCTGGAGACGGTGATG +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLVQNAF*WLETVM
Trigger: CATCACCGTCTCCAGCCACCAGAATGCATTCTGGAC...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGCTCTGCACACAGCCTaGCCTCTAGCTAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKAALHTA*PLARVR
Trigger: TCTAACTCTAGCTAGAGGCCAGGCTGTGTGCAGAGC...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGTCTGGTGATAATGGCTaGCCCTGGGTGGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLSGDNG*PWVGIV
Trigger: AACTATCCCCACCCAGGGCCAGCCATTATCACCAGA...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGTCTCTACACAGTACTaGAATGGAAAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSVSTQY*NGKTAG
Trigger: CCCTGCAGTTTTTCCATTTCAGTACTGTGTAGAGAC...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACATCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTSHCPK*AGKGQS
Trigger: AGACTGGCCTTTACCAGCTCATTTTGGACAATGTGA...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CACTCAACGGGTATAGAGGCTATCTGCAGAGAAAGGACTTTTCCACTGGGCTGTCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: HSTGIEAICRERTFPLGCRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...ACAGCCCAGTGGAAAAGTCCTTTCTCTGCAGATAGCCTCTATACCCGTTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR TCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCCTGTATTTGAACAATaGTATCCCATTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLPVFEQ*YPIDCR
Trigger: TCTGCAATCAATGGGATATCATTGTTCAAATACAGG...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCACTTTGTGCTTGAGTTaGGTGCTGTCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSTLCLS*VLSRMH
Trigger: ATGCATTCTGGACAGCACTCAACTCAAGCACAAAGT...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCACCCGTACTTTGTGCTTaGGTTGAGTGCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKAPVLCA*VECCPE
Trigger: TTCTGGACAGCACTCAACTCAAGCACAAAGTACGGG...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: CLWCGGSGYHFWMCSEPSRRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAAGGAGAGAAACATGCTaGGAAGTTGGTGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: EGTKGIARGTLAITSCEARRETC*EVGGGH
Trigger: GTGTCCACCACCAACTTCTCAGCATGTTTCTCTCCT...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGTCTTACCCAGGGTCCTaGGGGAAAAAGCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: LWCGGSGYHFWMCSEPSGSYPGS*GKKQFQ
Trigger: TTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGA...CCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCTCCCTTTCCCAGACCTaGACTGGCCTTAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCSLSQT*TGLSRE
Trigger: CTCTCTACTAAGGCCAGTTCAGGTCTGGGAAAGGGA...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGCCACAGTGATCTGCTaGAGAATAGACCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLATVIC*RIDLFL
Trigger: GAGAAAAAGGTCTATTCTTCAGCAGATCACTGTGGC...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TTTGTGGGATGGAGCAAATCAAACTTCTCTGTCCTGACAGTACACTGTCATGTGGAACTCCTGACCTTGTaGTCCACCCGCCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FVGWSKSNFSVLTVHCHVELLTL*STRLSL
Trigger: AAGGCTGAGGCGGGTGGATCACAAGGTCAGGAGTTC...CACATGACAGTGTACTGTCAGGACAGAGAAGTTTGATTTGCTCCATCCCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCGAGTGGCAAGGAGATTaGCTGGGTGATAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSEWQGD*LGDNEC
Trigger: ACACTCATTATCACCCAGGCAATCTCCTTGCCACTC...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTACACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGGAGTGCTGTCCAGAATaGATTCTGGTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLECCPE*ILVAGD
Trigger: GTCTCCAGCCACCAGAATGCATTCTGGACAGCACTC...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCGAGTGCTGTCCAGAATaGATTCTGGTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFECCPE*ILVAGD
Trigger: GTCTCCAGCCACCAGAATGCATTCTGGACAGCACTC...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRSSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLGNKRA*CIHTQS
Trigger: GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCC...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRGNKRA*CIHTQS
Trigger: GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCC...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACGTTACCAAAAGGCTATaGTCTGGAATGTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHVTKRL*SGMSFY
Trigger: ATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAAC...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCATGTACTGCTCATTTGTaGTTTAGCTCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSCTAHL*FSSAHS
Trigger: GCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTACA...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAGGGCACAAAGGGTATTaGAAGGGGAACTCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLGHKGY*KGNSCN
Trigger: ATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCC...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCAGCCATGTTTCTCTGTaGATCTCCAGTAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSSHVSL*ISSKQK
Trigger: CTTCTGCTTACTGGAGATGCACAGAGAAACATGGCT...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGCCTCAGATATCTTCCTaGTGGGACTGGCCAAAACGT +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLPQISS*WDWPKR
Trigger: ACGTTTTGGCCAGTCCCAGCAGGAAGATATCTGAGG...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS-3UTR GCA 90 bp TTCAGGAAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCCGCCCGCCACCGGTaGCTAAGCCTCCACTGTCGG +
Preference number: 4 (lower is better)
Translates to: FRKKWNFQNFCTGNYYLLAARHR*LSLHCR
Trigger: CCGACAGTGGAGGCTTAGGCACCGGTGGCGGGCGGC...CAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561714.5
ENST00000568466.6
CDS-3UTR CCA 90 bp CTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGAAAGTCGAGCTCGTCGTaGGCGCCACAGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LAIIISWLAVATVFPVIRKSSSS*APQFAV
Trigger: TACTGCAAACTGTGGCGCCCACGACGAGCTCGACTT...TCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCGGATGCACAATCATCTaGCTCAAGATCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPGCTII*LKICRP
Trigger: CGGCCTGCAGATCTTGAGCCAGATGATTGTGCATCC...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAGGCACTCAAAGGGTTTaGGACCACCTAATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIGTQRV*DHLMGY
Trigger: ATAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCC...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAAGACTCCCGGTAGGATaGCTCAAGAGGAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIRLPVG*LKRKIE
Trigger: CTCTATCTTCCTCTTGAGCCATCCTACCGGGAGTCT...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCTGGATCTAGGAGAGTaGCAAGGAGATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCLDLGE*QGDCLG
Trigger: ACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTCTGGATCTAGGAGAGTaGCAAGGAGATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPLDLGE*QGDCLG
Trigger: ACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAG...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTCTGGATCTAGGAGAGTaGCAAGGAGATTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLLDLGE*QGDCLG
Trigger: ACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAG...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAGGTGATAAACTCCCTTaGTCATCTGAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEGDKLP*SSEHSS
Trigger: AGAGCTGTGTTCAGATGACCAAGGGAGTTTATCACC...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAGGTGATAAACTCCCTTaGTCATCTGAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSGDKLP*SSEHSS
Trigger: AGAGCTGTGTTCAGATGACCAAGGGAGTTTATCACC...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGCGAAATATAGGGGTGTaGCCAGGCTTTGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLRNIGV*PGFGLL
Trigger: GAGCAAACCAAAGCCTGGCCACACCCCTATATTTCG...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGCGAAATATAGGGGTGTaGCCAGGCTTTGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLRNIGV*PGFGLL
Trigger: GAGCAAACCAAAGCCTGGCCACACCCCTATATTTCG...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGATTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCATGCAGCTGTAACTGCTaGGTTATGATATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSCSCNC*VMIWRN
Trigger: GTTCCTCCATATCATAACCCAGCAGTTACAGCTGCA...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCAATAGGAAGACAAGTTaGTCCATTGTACACAACATT +
Preference number: 4 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTNRKTS*SIVHNI
Trigger: AATGTTGTGTACAATGGACCAACTTGTCTTCCTATT...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGGGATGAGAAGCTGCTaGGGAAGCTGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPGMRSC*GSCCSR
Trigger: TCTGCTACAACAGCTTCCCCAGCAGCTTCTCATCCC...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp AAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTCAGAATGCATTCTGGTaGCTGGAGACGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: KPLRLASKVTEQPKADASQNAFW*LETVMR
Trigger: CCTCATCACCGTCTCCAGCCACCAGAATGCATTCTG...AGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAGTCCAGAATGCATTCTaGTGGCTGGAGACGGTGATG +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPVQNAF*WLETVM
Trigger: CATCACCGTCTCCAGCCACCAGAATGCATTCTGGAC...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGTCCAGAATGCATTCTaGTGGCTGGAGACGGTGATG +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPVQNAF*WLETVM
Trigger: CATCACCGTCTCCAGCCACCAGAATGCATTCTGGAC...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGERLSIF*FRFNAH
Trigger: GTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCT...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCATTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPFPHKW*VPLLAP
Trigger: TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAA...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTGCAGATGCTTCTGTTTaGAAAAGGTTCTACGACCAG +
Preference number: 4 (lower is better)
Translates to: GCLWCGGSGYHFWMCSEPADASV*KRFYDQ
Trigger: CTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGC...AGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGGTGCTCAGAGCCTTCTaGGGAAAAGGCTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGVLRAF*GKGWFL
Trigger: TAAAAACCAGCCTTTTCCCCAGAAGGCTCTGAGCAC...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCATCAGGTTATCACTTCTaGATGTGCTCAGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSSGYHF*MCSEPS
Trigger: AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGA...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCTCAGGTTATCACTTCTaGATGTGCTCAGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QGVFGVEGQVITSGCAQSSGYHF*MCSEPS
Trigger: AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGA...GCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAACTGACAACAGGTGGTaGGCAATAGGCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQTDNRW*AIGQLP
Trigger: AGGGAGCTGGCCTATTGCCCACCACCTGTTGTCAGT...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTCTCCAAAGGAAGCTGTaGGCGTCCAACCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKILQRKL*ASNHRP
Trigger: GGGCCTGTGGTTGGACGCCCACAGCTTCCTTTGGAG...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACACCAAGTCCATACTGTTaGTGCCAAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQSPGITASGLQPAHCLTPSPYC*CQVSSP
Trigger: TGGAGAAGAAACTTGGCATCAACAGTATGGACTTGG...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATACATGGACAGAAGCATTaGGCCACGTATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIHGQKH*ATYLLS
Trigger: TGACAGAAGATACGTGGCTCAATGCTTCTGTCCATG...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAGTCTCTACACAGTACTaGAATGGAAAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLVSTQY*NGKTAG
Trigger: CCCTGCAGTTTTTCCATTTCAGTACTGTGTAGAGAC...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCTCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFSHCPK*AGKGQS
Trigger: AGACTGGCCTTTACCAGCTCATTTTGGACAATGTGA...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCCAAGAGCTAGCGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ASPVSRRLPIPFLNPRASVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...GCTAGCTCTTGGGTTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGCAGGAGGTGTTGGTGTaGCTTGAAAAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLQEVLV*LEKAGV
Trigger: TACACCAGCCTTTTCAAGTCACACCAACACCTCCTG...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGAGGGTATGCACAGAATaGGGTGTATGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQRVCTE*GVWAKR
Trigger: TCTCTTAGCCCATACACCTCATTCTGTGCATACCCT...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAACTTTGTGCTTGAGTTaGGTGCTGTCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLTLCLS*VLSRMH
Trigger: ATGCATTCTGGACAGCACTCAACTCAAGCACAAAGT...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCCCGTACTTTGTGCTTaGGTTGAGTGCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFPVLCA*VECCPE
Trigger: TTCTGGACAGCACTCAACTCAAGCACAAAGTACGGG...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp ATTAGTTTGCATAGGCTGATAGGAAGACCCCACAGGAGGTGTTGGTGTGACTTGCCCATCAGGTGGAAATaGCGCTGGATCACACAAACT +
Preference number: 4 (lower is better)
Translates to: ISLHRLIGRPHRRCWCDLPIRWK*RWITQT
Trigger: AGTTTGTGTGATCCAGCGTCATTTCCACCTGATGGG...CAAGTCACACCAACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTCCCATCAGGTGGAAATaGCGCTGGATCACACAAACT +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPPIRWK*RWITQT
Trigger: AGTTTGTGTGATCCAGCGTCATTTCCACCTGATGGG...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTT +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRNLPKA*GGGMLL
Trigger: AAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATT...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGAGCTGCCTAAACCACTaGGACTGGCTTCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLSCLNH*DWLQRS
Trigger: TGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAGCT...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCATCTGGCTCAAGATCTaGAGGCCGCGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEIIWLKI*RPRARG
Trigger: CCCCCGGGCTCGCGGCCTGCAGATCTTGAGCCAGAT...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGAGTGGCAAGGAGATTaGCTGGGTGATAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LPKPLRLASKVTEQPKADEWQGD*LGDNEC
Trigger: ACACTCATTATCACCCAGGCAATCTCCTTGCCACTC...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGCACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCACTCTCATCTCTACACTaGAACTGTGGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKALSSLH*NCGRWD
Trigger: ATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAG...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGCTGCAGACCAATGGTTaGAAAGTTAGGCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQLQTNG*KVRLSI
Trigger: GATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAG...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTSKVMS*RPMVAK
Trigger: CTTTGCAACCATTGGTCTGCAGGACATCACTTTAGA...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTACCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCATCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSSNSLC*SCSFAK
Trigger: TTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGA...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGTCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLSNSLC*SCSFAK
Trigger: TTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGA...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGAGCTCAAACAGCCTATaGTGCTCCTGTTCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQSSNSL*CSCSFA
Trigger: GGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAGTAACCAGGTCACCTaGAAAAGCAGCACCTCGGAA +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCSNQVT*KSSTSE
Trigger: TTCCGAGGTGCTGCTTTTGCAGGTGACCTGGTTACT...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGGGCACAAAGGGTATTaGAAGGGGAACTCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LPKPLRLASKVTEQPKADGHKGY*KGNSCN
Trigger: ATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCC...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGGGCACTCAAAGGGTTTaGGACCACCTAATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRGTQRV*DHLMGY
Trigger: ATAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCC...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCAGACTCCCGGTAGGATaGCTCAAGAGGAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFRLPVG*LKRKIE
Trigger: CTCTATCTTCCTCTTGAGCCATCCTACCGGGAGTCT...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp AAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTAACAAACTTCAGCACTaGAGTGCCTCCGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KPLRLASKVTEQPKADASNKLQH*SASVSH
Trigger: GTGGGAAACGGAGGCACTCCAGTGCTGAAGTTTGTT...AGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCGAAATATAGGGGTGTaGCCAGGCTTTGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCRNIGV*PGFGLL
Trigger: GAGCAAACCAAAGCCTGGCCACACCCCTATATTTCG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCTGCAGCTGTAACTGCTaGGTTATGATATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSCSCNC*VMIWRN
Trigger: GTTCCTCCATATCATAACCCAGCAGTTACAGCTGCA...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGAGGCTGGTGTACAATTaGAGAAGGAATCATATGCTG +
Preference number: 4 (lower is better)
Translates to: LWCGGSGYHFWMCSEPSGRLVYN*RRNHML
Trigger: CAGCATATGATTCCTTCTCCAATTGTACACCAGCCT...CCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCATCAGATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGAATAGGAAGACAAGTTaGTCCATTGTACACAACATT +
Preference number: 4 (lower is better)
Translates to: PSDLPKSRDSGLGRGACLNRKTS*SIVHNI
Trigger: AATGTTGTGTACAATGGACCAACTTGTCTTCCTATT...CAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: GCLWCGGSGYHFWMCSEPWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...AGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCTGAGAAGTTGGTGGTaGACACAAGGCTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRLRSWW*TQGCSK
Trigger: CTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAG...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGATGCTGAGAAGTTGGTaGTGGACACAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRMLRSW*WTQGCS
Trigger: ACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCAT...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAATGCTGAGAAGTTGGTaGTGGACACAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLMLRSW*WTQGCS
Trigger: ACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCAT...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGTTTCCCCACAAATGGTaGGTCCCACTCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GRPESFQAINRMADKPSMFPHKW*VPLLAP
Trigger: TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAA...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGGCAGATGCTTCTGTTTaGAAAAGGTTCTACGACCAG +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGADASV*KRFYDQ
Trigger: CTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGC...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCGCAGATGCTTCTGTTTaGAAAAGGTTCTACGACCAG +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSADASV*KRFYDQ
Trigger: CTGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGC...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGTGCTCAGAGCCTTCTaGGGAAAAGGCTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: EGTKGIARGTLAITSCEAVLRAF*GKGWFL
Trigger: TAAAAACCAGCCTTTTCCCCAGAAGGCTCTGAGCAC...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGAGGGTGTCTTTGGTGTaGAGGGTCAGGTTATCACTT +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLRVSLV*RVRLSL
Trigger: AAGTGATAACCTGACCCTCCACACCAAAGACACCCT...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAGGGCCTGCAGTCTCCTaGAATAACAGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPGPAVS*NNSIRP
Trigger: AGGCCTGATGCTGTTATTCCAGGAGACTGCAGGCCC...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCGATAATGGCTGGCCCTaGGTGGGGATAGTTTACACC +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCDNGWP*VGIVYT
Trigger: GGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCTTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KKWNFQNFCTGNYYLLACFRSES*PRAEQH
Trigger: GTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAA...GCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTCAGATATCTTCCTGCTaGGACTGGCCAAAACGTAGG +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPQISSC*DWPKRR
Trigger: CCTACGTTTTGGCCAGTCCCAGCAGGAAGATATCTG...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS-3UTR TCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGGAGCTGAAACGATGGTaGCAAAACAGAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLELKRW*QNRRVR
Trigger: TCTCACTCTTCTGTTTTGTCACCATCGTTTCAGCTC...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGCCAAGTCCATACTGTTaGTGCCAAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQPSPYC*CQVSSP
Trigger: TGGAGAAGAAACTTGGCATCAACAGTATGGACTTGG...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCTTCCCCTGGGGGAGTaGCCAGGTGAAGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHLPLGE*PGEGTG
Trigger: ACCTGTTCCTTCACCTGGTCACTCCCCCAGGGGAAG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCACATGGACAGAAGCATTaGGCCACGTATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPHGQKH*ATYLLS
Trigger: TGACAGAAGATACGTGGCTCAATGCTTCTGTCCATG...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGGTCTCTACACAGTACTaGAATGGAAAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLVSTQY*NGKTAG
Trigger: CCCTGCAGTTTTTCCATTTCAGTACTGTGTAGAGAC...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAACTTGACATTTTTCCCTaGTTATCTTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGELDIFP*LSSLLP
Trigger: AGGTAGAAGGGAAGATAATCAGGGAAAAATGTCAAG...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGACAGTGGTTGACAGCCAAGATTCACTAAACCAGAAAGAGTTGCATCCTGCTCTGTGGCAGATGGGATaGGGTCACCATGGATGCATA +
Preference number: 4 (lower is better)
Translates to: MTVVDSQDSLNQKELHPALWQMG*GHHGCI
Trigger: TATGCATCCATGGTGACCTCATCCCATCTGCCACAG...AGCAGGATGCAACTCTTTCTGGTTTAGTGAATCTTGGCTGTCAACCACTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAGGAGGTGTTGGTGTaGCTTGAAAAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCQEVLV*LEKAGV
Trigger: TACACCAGCCTTTTCAAGTCACACCAACACCTCCTG...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AATATGAGGAAGTTCTTGAGCAGACCGCTGGGAGCACTCAACGGGTATAGAGGCATGGATGACAGTGGTTaGCAGCCAAGATTCACTAAA +
Preference number: 4 (lower is better)
Translates to: NMRKFLSRPLGALNGYRGMDDSG*QPRFTK
Trigger: TTTAGTGAATCTTGGCTGTCAACCACTGTCATCCAT...GCCTCTATACCCGTTGAGTGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAATGGATGACAGTGGTTaGCAGCCAAGATTCACTAAA +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRMDDSG*QPRFTK
Trigger: TTTAGTGAATCTTGGCTGTCAACCACTGTCATCCAT...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAAGGGTATGCACAGAATaGGGTGTATGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLRVCTE*GVWAKR
Trigger: TCTCTTAGCCCATACACCTCATTCTGTGCATACCCT...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGGGTATGCACAGAATaGGGTGTATGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPRVCTE*GVWAKR
Trigger: TCTCTTAGCCCATACACCTCATTCTGTGCATACCCT...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CCCCCTGGCCCGTACTTTGTGCTTGAGTTGAGTGCTGTCCAGAATGCATTCTGGCCTGTATTTGAACAATaGTATCCCATTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPGPYFVLELSAVQNAFWPVFEQ*YPIDCR
Trigger: TCTGCAATCAATGGGATATCATTGTTCAAATACAGG...CCAGAATGCATTCTGGACAGCACTCAACTCAAGCACAAAGTACGGGCCAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATTGGCCCAGAAAGCGGTaGACTAGCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNWPRKR*TSQGMR
Trigger: TCTCATCCCTTGGCTAGTTCACCGCTTTCTGGGCCA...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CACTCAACGGGTATAGAGGCTATCTGCAGAGAAAGGACTTTTCCACTGGGCTGTACTTTGTGCTTGAGTTaGGTGCTGTCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: HSTGIEAICRERTFPLGCTLCLS*VLSRMH
Trigger: ATGCATTCTGGACAGCACTCAACTCAAGCACAAAGT...ACAGCCCAGTGGAAAAGTCCTTTCTCTGCAGATAGCCTCTATACCCGTTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAACTTTGTGCTTGAGTTaGGTGCTGTCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: CKSSTSETREPAAFTLKATLCLS*VLSRMH
Trigger: ATGCATTCTGGACAGCACTCAACTCAAGCACAAAGT...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGGATCACACAAACTGTaGCATATTAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLGSHKL*HIKDEG
Trigger: ACCTTCATCCTTAATATGTCACAGTTTGTGTGATCC...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCAATCTACCCAAGGCCTaGGGTGGAGGAATGCTACTT +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCNLPKA*GGGMLL
Trigger: AAGTAGCATTCCTCCACCTCAGGCCTTGGGTAGATT...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAATTCCAACACTTCAATaGTGGAATGGTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEIPTLQ*WNGLFS
Trigger: TGAGAAGAGACCATTCCATCATTGAAGTGTTGGAAT...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGTCTTACCCAGGGTCCTaGGGGAAAAAGCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLSYPGS*GKKQFQ
Trigger: TTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGA...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATTTTCTCTGCCCATGCTaGTGTACTGCTCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: GGHKAAVSTVRAHQIFLNFLCPC*CTAHLC
Trigger: GCACAAATGAGCAGTACATCAGCATGGGCAGAGAAA...ATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCCACAGTGATCTGCTaGAGAATAGACCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EGTKGIARGTLAITSCEAATVIC*RIDLFL
Trigger: GAGAAAAAGGTCTATTCTTCAGCAGATCACTGTGGC...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCAGCAGCACCACACATaGACCCAAAGACATGTTCTT +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRQQHHT*TQRHVL
Trigger: AAGAACATGTCTTTGGGTTCATGTGTGGTGCTGCTG...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGCAATTTGAGCCCATCTaGGCCTTAAAGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGQFEPI*ALKIHS
Trigger: AGAATGGATCTTTAAGGCTCAGATGGGCTCAAATTG...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACACAATTTGAGCCCATCTaGGCCTTAAAGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LQSPGITASGLQPAHCLTQFEPI*ALKIHS
Trigger: AGAATGGATCTTTAAGGCTCAGATGGGCTCAAATTG...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: APWETEIWDMSLPIISFTSRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR GCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPSRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCTCTCATCTCTACACTaGAACTGTGGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCLSSLH*NCGRWD
Trigger: ATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCACTCTCATCTCTACACTaGAACTGTGGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPLSSLH*NCGRWD
Trigger: ATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAG...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGCTGCCTGCTCACCCCTaGTCCTTGGGAAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LKPSHLESCIFSAHADVLLPAHP*SLGNRN
Trigger: ATTTCTGTTTCCCAAGGAGCAGGGGTGAGCAGGCAG...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACCTGAGGTGGAGGAATaGTACTTTCCCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQPEVEE*YFPHKW
Trigger: CCATTTGTGGGGAAAGTAGCATTCCTCCACCTCAGG...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCTGCTCCTGTTCTTTTaGCAAATCTACCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCLLLFF*QIYPRP
Trigger: AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAACAAGAGAGCCTGCTaGATTCACACTCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPNKRAC*IHTQST
Trigger: GGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTT...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAACAGCCAAAGGCAGATaGTTCTGTTTGGAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLTAKGR*FCLEKV
Trigger: AACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGT...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGGTTTCTGCTGGGCCCTaGCTTGGACACCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRVSAGP*LGHQSH
Trigger: GTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAAC...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGAGCCATGTTTCTCTGTaGATCTCCAGTAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLSHVSL*ISSKQK
Trigger: CTTCTGCTTACTGGAGATGCACAGAGAAACATGGCT...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCACTGAGGAGCCTCAACTaGTGGCTCTTCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPLRSLN*WLFFPL
Trigger: CAAAGGGAAGAAGAGCCAGCAGTTGAGGCTCCTCAG...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAGGCAAGGAGATTGCCTaGGTGATAATGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLGKEIA*VIMSVQ
Trigger: TTGGACACTCATTATCACCCAGGCAATCTCCTTGCC...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTGGCAAGGAGATTGCCTaGGTGATAATGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLGKEIA*VIMSVQ
Trigger: TTGGACACTCATTATCACCCAGGCAATCTCCTTGCC...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCTACACAGTACTGAAATaGAAAAACTGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFYTVLK*KNCRAK
Trigger: CTTGGCCCTGCAGTTTTTCCATTTCAGTACTGTGTA...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTATACACAGTACTGAAATaGAAAAACTGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLYTVLK*KNCRAK
Trigger: CTTGGCCCTGCAGTTTTTCCATTTCAGTACTGTGTA...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGTTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATGGGATGAGGTCACCATaGATGCATATGTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GGHKAAVSTVRAHQIFLNGMRSP*MHMFVG
Trigger: TCCCACAAACATATGCATCCATGGTGACCTCATCCC...ATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGGGATGAGGTCACCATaGATGCATATGTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPGMRSP*MHMFVG
Trigger: TCCCACAAACATATGCATCCATGGTGACCTCATCCC...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGGCTGGTGTACAATTaGAGAAGGAATCATATGCTG +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSRLVYN*RRNHML
Trigger: CAGCATATGATTCCTTCTCCAATTGTACACCAGCCT...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGATGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGCTGAGAAGTTGGTaGTGGACACAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FYDQMTQTGSALHSLLVFMLRSW*WTQGCS
Trigger: ACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCAT...AAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCATGCTGAGAAGTTGGTaGTGGACACAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCMLRSW*WTQGCS
Trigger: ACTGCAGCCTTGTGTCCACCACCAACTTCTCAGCAT...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTAGGGTGTCTTTGGTGTaGAGGGTCAGGTTATCACTT +
Preference number: 4 (lower is better)
Translates to: KPLRLASKVTEQPKADASRVSLV*RVRLSL
Trigger: AAGTGATAACCTGACCCTCCACACCAAAGACACCCT...AGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATACTGACAACAGGTGGTaGGCAATAGGCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNTDNRW*AIGQLP
Trigger: AGGGAGCTGGCCTATTGCCCACCACCTGTTGTCAGT...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAGTCTGGCCATTTCTCTaGAATGTCAACCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPVWPFL*NVNREA
Trigger: GGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGAC...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGGAGCTGAAACGATGGTaGCAAAACAGAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLELKRW*QNRRVR
Trigger: TCTCACTCTTCTGTTTTGTCACCATCGTTTCAGCTC...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGAGCTGAAACGATGGTaGCAAAACAGAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPELKRW*QNRRVR
Trigger: TCTCACTCTTCTGTTTTGTCACCATCGTTTCAGCTC...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACAGAGATAGATGTAATTTaGATACTTGGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITEIDVI*ILGHSK
Trigger: CTTTGAGTGCCCAAGTATTCAAATTACATCTATCTC...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCAGCTTCATTCAACTCTaGGTCCACATCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: QVWPFLWNVNREANFLPLSFIQL*VHIIIN
Trigger: ATTTATGATGATGTGGACTCAGAGTTGAATGAAGCT...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTACCAAGTCCATACTGTTaGTGCCAAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLPSPYC*CQVSSP
Trigger: TGGAGAAGAAACTTGGCATCAACAGTATGGACTTGG...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCCCAAGTCCATACTGTTaGTGCCAAGTTTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPPSPYC*CQVSSP
Trigger: TGGAGAAGAAACTTGGCATCAACAGTATGGACTTGG...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGTCTCTACACAGTACTaGAATGGAAAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPVSTQY*NGKTAG
Trigger: CCCTGCAGTTTTTCCATTTCAGTACTGTGTAGAGAC...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAGGAACTGAAAGAAACTaGTCACCACATGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRGTERN*SPHESF
Trigger: GAAAGATTCATGTGGTGATCAGTTTCTTTCAGTTCC...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCGGAACTGAAAGAAACTaGTCACCACATGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSGTERN*SPHESF
Trigger: GAAAGATTCATGTGGTGATCAGTTTCTTTCAGTTCC...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPSHCPK*AGKGQS
Trigger: AGACTGGCCTTTACCAGCTCATTTTGGACAATGTGA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR TCA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACACTTGACATTTTTCCCTaGTTATCTTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: LQSPGITASGLQPAHCLTLDIFP*LSSLLP
Trigger: AGGTAGAAGGGAAGATAATCAGGGAAAAATGTCAAG...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGGGTGTTGGTGTGACTTaGAAAGGCTGGTGTACAATT +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRGVGVT*KGWCTI
Trigger: AATTGTACACCAGCCTTTTCAAGTCACACCAACACC...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCGGTGTTGGTGTGACTTaGAAAGGCTGGTGTACAATT +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPGVGVT*KGWCTI
Trigger: AATTGTACACCAGCCTTTTCAAGTCACACCAACACC...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGCAGGAGGTGTTGGTGTaGCTTGAAAAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVQEVLV*LEKAGV
Trigger: TACACCAGCCTTTTCAAGTCACACCAACACCTCCTG...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAATGAAATGGTATGGATaGCAGTGGTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLMKWYG*QWLTAK
Trigger: CTTGGCTGTCAACCACTGTCATCCATACCATTTCAT...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGATGAAATGGTATGGATaGCAGTGGTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRMKWYG*QWLTAK
Trigger: CTTGGCTGTCAACCACTGTCATCCATACCATTTCAT...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACCTGTATTTGAACAATaGTATCCCATTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: QVTCKSSTSETREPAAFTPVFEQ*YPIDCR
Trigger: TCTGCAATCAATGGGATATCATTGTTCAAATACAGG...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGACTTTGTGCTTGAGTTaGGTGCTGTCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLTLCLS*VLSRMH
Trigger: ATGCATTCTGGACAGCACTCAACTCAAGCACAAAGT...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCACTTTGTGCTTGAGTTaGGTGCTGTCCAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPTLCLS*VLSRMH
Trigger: ATGCATTCTGGACAGCACTCAACTCAAGCACAAAGT...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATCACATGCTGACTTTCTaGGGCATAGGTGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNHMLTF*GIGVGL
Trigger: CAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTG...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGCACATGCTGACTTTCTaGGGCATAGGTGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PESFQAINRMADKPSMPVHMLTF*GIGVGL
Trigger: CAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTG...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGTTTCCTATAAATCTATaGACGTCTTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLFPINL*TSSGHM
Trigger: CATGTGTCCTGAAGACGTTCATAGATTTATAGGAAA...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGCCTTAGTAGAGAGAGTCCTGGCATCAAGGGCCTGCAGTCTCCTGGAATAACATTTCCTATAAATCTATaGACGTCTTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: GLSRESPGIKGLQSPGITFPINL*TSSGHM
Trigger: CATGTGTCCTGAAGACGTTCATAGATTTATAGGAAA...TGTTATTCCAGGAGACTGCAGGCCCTTGATGCCAGGACTCTCTCTACTAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACAATTCCAACACTTCAATaGTGGAATGGTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LQSPGITASGLQPAHCLTIPTLQ*WNGLFS
Trigger: TGAGAAGAGACCATTCCATCATTGAAGTGTTGGAAT...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGGGTTCTACGACCAGATaGCACAAACAGGAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: GRPESFQAINRMADKPSMGSTTR*HKQEAH
Trigger: GTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACC...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGTCCCTTTCCCAGACCTaGACTGGCCTTAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: PESFQAINRMADKPSMPVSLSQT*TGLSRE
Trigger: CTCTCTACTAAGGCCAGTTCAGGTCTGGGAAAGGGA...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCAGCTCCTAACCTACTaGCAACAGGTGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GRPESFQAINRMADKPSMQLLTY*QQVVGN
Trigger: ATTGCCCACCACCTGTTGTCAGTAGGTTAGGAGCTG...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCACTATCCACATTCTGTaGCACAACTCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFTIHIL*HNSLFK
Trigger: CTTGAAAAGTGAGTTGTGTCACAGAATGTGGATAGT...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAGAGGCTTTTAATTCTTaGGGGCACAAAGGGTATTGC +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLEAFNS*GHKGYC
Trigger: GCAATACCCTTTGTGCCCTCAAGAATTAAAAGCCTC...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCACTTAAAGATCCATTCTaGATACCAAAAACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSLKDPF*IPKTGL
Trigger: AAGCCCTGTTTTTGGTATTCAGAATGGATCTTTAAG...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTCAATTTGAGCCCATCTaGGCCTTAAAGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: CLWCGGSGYHFWMCSEPSQFEPI*ALKIHS
Trigger: AGAATGGATCTTTAAGGCTCAGATGGGCTCAAATTG...AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTAATCATCATCTAAAGTaGTGTCCTGCAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: CLWCGGSGYHFWMCSEPSNHHLK*CPADQW
Trigger: CCATTGGTCTGCAGGACATCACTTTAGATGATGATT...AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS-3UTR TCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTAACCATCATCTAAAGTaGTGTCCTGCAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLNHHLK*CPADQW
Trigger: CCATTGGTCTGCAGGACATCACTTTAGATGATGGTT...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp AAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KKWNFQNFCTGNYYLLACVGATV*SSHRRG
Trigger: GCCACGCCGATGACTACTGCAAACTGTGGCGCCCAC...GCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR GCA 90 bp TTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTCACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: FYDQMTQTGSALHSLLVFHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...AAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CTGCACTGCAGCTGTAACTGCTGGGTTATGATATGGAGGAACTTCAAGGACAATCACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: LHCSCNCWVMIWRNFKDNHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCAGTTACAGCTGCAGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACTGCAGACCAATGGTTaGAAAGTTAGGCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQLQTNG*KVRLSI
Trigger: GATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAG...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGTCAAACAGCCTATGCTaGTCCTGTTCTTTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLSNSLC*SCSFAK
Trigger: TTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGA...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAACAGCCAAAGGCAGATaGTTCTGTTTGGAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVITAKGR*FCLEKV
Trigger: AACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGT...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGTTGTGTAAGGAGCACTaGACTCCCATAAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGLCKEH*TPIKGF
Trigger: AAAACCTTTTATGGGAGTGCAGTGCTCCTTACACAA...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGAGGTAATGAAGATGTaGTGCAGGCCGCGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGISRTFVLAIIISWLAVEVMKM*CRPRAR
Trigger: CCGGGCTCGCGGCCTGCAGCACATCTTCATTACCTC...TACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562171.1
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGGATGCACAATCATCTaGCTCAAGATCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIGCTII*LKICRP
Trigger: CGGCCTGCAGATCTTGAGCCAGATGATTGTGCATCC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGAGACTCCCGGTAGGATaGCTCAAGAGGAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: LKPSHLESCIFSAHADVLRLPVG*LKRKIE
Trigger: CTCTATCTTCCTCTTGAGCCATCCTACCGGGAGTCT...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAACAAACTTCAGCACTaGAGTGCCTCCGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPNKLQH*SASVSH
Trigger: GTGGGAAACGGAGGCACTCCAGTGCTGAAGTTTGTT...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTGGTGATAAACTCCCTTaGTCATCTGAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLGDKLP*SSEHSS
Trigger: AGAGCTGTGTTCAGATGACCAAGGGAGTTTATCACC...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAGGTGTGGCCAGGCTTTaGTTTGCTCCAGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQGVARL*FAPGKG
Trigger: CCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACC...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp CACTCAACGGGTATAGAGGCTATCTGCAGAGAAAGGACTTTTCCACTGGGCTGTGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: HSTGIEAICRERTFPLGCAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...ACAGCCCAGTGGAAAAGTCCTTTCTCTGCAGATAGCCTCTATACCCGTTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGTGCTGGGTTATGATATaGAGGAACTTCAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGCWVMI*RNFKDN
Trigger: ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCA...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCTGCAGCTGTAACTGCTaGGTTATGATATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: APWETEIWDMSLPIISFTCSCNC*VMIWRN
Trigger: GTTCCTCCATATCATAACCCAGCAGTTACAGCTGCA...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR CCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCATGCAGCTGTAACTGCTaGGTTATGATATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPCSCNC*VMIWRN
Trigger: GTTCCTCCATATCATAACCCAGCAGTTACAGCTGCA...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGGGGATGAGAAGCTGCTaGGGAAGCTGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PESFQAINRMADKPSMPVGMRSC*GSCCSR
Trigger: TCTGCTACAACAGCTTCCCCAGCAGCTTCTCATCCC...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPRLSIF*FRFNAH
Trigger: GTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCT...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLRLSIF*FRFNAH
Trigger: GTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCT...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTCTCCAAAGGAAGCTGTaGGCGTCCAACCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSLQRKL*ASNHRP
Trigger: GGGCCTGTGGTTGGACGCCCACAGCTTCCTTTGGAG...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAGAAGGCATCAAAATTTaGTGCATAGCAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PEGCRVGNPRSKERNMLREGIKI*CIATLD
Trigger: ATCCAGAGTTGCTATGCACCAAATTTTGATGCCTTC...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTATTTGCATAGTCCAATaGATGTGTGCTTTAACACCA +
Preference number: 4 (lower is better)
Translates to: GCLWCGGSGYHFWMCSEPICIVQ*MCALTP
Trigger: TGGTGTTAAAGCACACATCCATTGGACTATGCAAAT...AGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATGATAATGGCTGGCCCTaGGTGGGGATAGTTTACACC +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNDNGWP*VGIVYT
Trigger: GGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTTCTGGTGATAATGGCTaGCCCTGGGTGGGGATAGTT +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKISGDNG*PWVGIV
Trigger: AACTATCCCCACCCAGGGCCAGCCATTATCACCAGA...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGAGCCTCCCGAGTAGCTaGGATTATAGTCACACACCA +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVSLPSS*DYSHTP
Trigger: TGGTGTGTGACTATAATCCCAGCTACTCGGGAGGCT...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp CTGATAGGAAGACCCCACAGGAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAATTGGAGAAGGAATCAT +
Preference number: 4 (lower is better)
Translates to: LIGRPHRRCWCD*KRLVYNWRRNH
Trigger: ATGATTCCTTCTCCAATTGTACACCAGCCTTTTCAAGTCACACCAACACCTCCTGTGGGGTCTTCCTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GAAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCGCCAAAGACGAGTTTaGAGTCGAGCTCGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: EEVEFPELLYWQLLSLGLRQRRV*SRARRG
Trigger: CCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCG...CAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR TCA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAAAGTTTTCCTTGTTTTaGGAGGGATGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIKFSLF*EGCQSL
Trigger: TAGAGACTGACATCCCTCTCAAAACAAGGAAAACTT...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTCACAACCATTTCATaGCCTCCATTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLVTTIS*PPFTEQ
Trigger: TTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGAC...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCCCTTCTACCTCCCACTaGGGTCGTCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WNFQNFCTGNYYLLACSSPSTSH*GRPSCP
Trigger: AGGACAAGATGGACGACCTCAGTGGGAGGTAGAAGG...GCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAATGGATGACAGTGGTTaGCAGCCAAGATTCACTAAA +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLMDDSG*QPRFTK
Trigger: TTTAGTGAATCTTGGCTGTCAACCACTGTCATCCAT...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCATGGATGACAGTGGTTaGCAGCCAAGATTCACTAAA +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFMDDSG*QPRFTK
Trigger: TTTAGTGAATCTTGGCTGTCAACCACTGTCATCCAT...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAATGAAATGGTATGGATaGCAGTGGTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQMKWYG*QWLTAK
Trigger: CTTGGCTGTCAACCACTGTCATCCATACCATTTCAT...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCATTTCTCTGCCCATGCTaGTGTACTGCTCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPFLCPC*CTAHLC
Trigger: GCACAAATGAGCAGTACATCAGCATGGGCAGAGAAA...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGTGCAATAACCTCATGTaGGGCAGCTACACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SISSATGIKVFRRHQNLVCNNLM*GSYTRG
Trigger: GCCCCTGGTGTAGCTGCCTCACATGAGGTTATTGCA...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPSRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCAGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCTTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCACTGCAGACCAATGGTTaGAAAGTTAGGCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPLQTNG*KVRLSI
Trigger: GATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAG...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp AAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTTCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KPLRLASKVTEQPKADASSKVMS*RPMVAK
Trigger: CTTTGCAACCATTGGTCTGCAGGACATCACTTTAGA...AGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCTCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: APWETEIWDMSLPIISFTSKVMS*RPMVAK
Trigger: CTTTGCAACCATTGGTCTGCAGGACATCACTTTAGA...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR GCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAACAAGAGAGCCTGCTaGATTCACACTCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPNKRAC*IHTQST
Trigger: GGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTT...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATAGTAACCAGGTCACCTaGAAAAGCAGCACCTCGGAA +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNSNQVT*KSSTSE
Trigger: TTCCGAGGTGCTGCTTTTGCAGGTGACCTGGTTACT...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAATGTACTGCTCATTTGTaGTTTAGCTCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQCTAHL*FSSAHS
Trigger: GCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTACA...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGTGTAATTTGAATACTTaGGCACTCAAAGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQCNLNT*ALKGFG
Trigger: CCCAAACCCTTTGAGTGCCCAAGTATTCAAATTACA...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTTACACAGTACTGAAATaGAAAAACTGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPYTVLK*KNCRAK
Trigger: CTTGGCCCTGCAGTTTTTCCATTTCAGTACTGTGTA...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCATACACAGTACTGAAATaGAAAAACTGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPYTVLK*KNCRAK
Trigger: CTTGGCCCTGCAGTTTTTCCATTTCAGTACTGTGTA...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTACACAGTACTGAAATaGAAAAACTGCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLYTVLK*KNCRAK
Trigger: CTTGGCCCTGCAGTTTTTCCATTTCAGTACTGTGTA...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCACTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGTGCTGGGTTATGATATaGAGGAACTTCAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLCWVMI*RNFKDN
Trigger: ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCA...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCGATGCAGCTGTAACTGCTaGGTTATGATATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LAIIISWLAVATVFPVIRCSCNC*VMIWRN
Trigger: GTTCCTCCATATCATAACCCAGCAGTTACAGCTGCA...TCGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAAGGCTGGTGTACAATTaGAGAAGGAATCATATGCTG +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPRLVYN*RRNHML
Trigger: CAGCATATGATTCCTTCTCCAATTGTACACCAGCCT...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTAAGAATGAAATGGTATaGATGACAGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: CLWCGGSGYHFWMCSEPSKNEMV*MTVVDS
Trigger: GCTGTCAACCACTGTCATCCATACCATTTCATTCTT...AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTTGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTACTGACAACAGGTGGTaGGCAATAGGCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EIARLPRKLPKGYALECLTDNRW*AIGQLP
Trigger: AGGGAGCTGGCCTATTGCCCACCACCTGTTGTCAGT...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGAAGGCATCAAAATTTaGTGCATAGCAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLEGIKI*CIATLD
Trigger: ATCCAGAGTTGCTATGCACCAAATTTTGATGCCTTC...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGTACAGGCGTGAGCCGTaGTACCTGGCAAAGTTATAT +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVYRREP*YLAKLY
Trigger: ATATAACTTTGCCAGGTACCACGGCTCACGCCTGTA...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp ACTGTTGATACTGTACTTCTCAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCACTCAACGGGTATAGA +
Preference number: 4 (lower is better)
Translates to: TVDTVLLNMRKF*SRPLGALNGYR
Trigger: TCTATACCCGTTGAGTGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATTGAGAAGTACAGTATCAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp AGGAAGACAAGTTGGTCCATTGTACACAACATTAGTTaGCATAGGCTGATAGGAAGACCCCACAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RKTSWSIVHNIS*HRLIGRPHRRC
Trigger: ACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAAACTAATGTTGTGTACAATGGACCAACTTGTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGGAGATAGATGTAATTTaGATACTTGGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLEIDVI*ILGHSK
Trigger: CTTTGAGTGCCCAAGTATTCAAATTACATCTATCTC...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAAAGTTTTCCTTGTTTTaGGAGGGATGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPKFSLF*EGCQSL
Trigger: TAGAGACTGACATCCCTCTCAAAACAAGGAAAACTT...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTAAGTTTTCCTTGTTTTaGGAGGGATGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPKFSLF*EGCQSL
Trigger: TAGAGACTGACATCCCTCTCAAAACAAGGAAAACTT...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCATTCTTTAAAGGATACTaGGATCCAAGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPFFKGY*DPRPSS
Trigger: AGATGATGGCCTTGGATCTCAGTATCCTTTAAAGAA...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCTTCTTTAAAGGATACTaGGATCCAAGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCFFKGY*DPRPSS
Trigger: AGATGATGGCCTTGGATCTCAGTATCCTTTAAAGAA...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCATTCTTTAAAGGATACTaGGATCCAAGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPFFKGY*DPRPSS
Trigger: AGATGATGGCCTTGGATCTCAGTATCCTTTAAAGAA...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTCTTTAAAGGATACTaGGATCCAAGGCCATCATCT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLFFKGY*DPRPSS
Trigger: AGATGATGGCCTTGGATCTCAGTATCCTTTAAAGAA...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGTCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LKPSHLESCIFSAHADVLSHCPK*AGKGQS
Trigger: AGACTGGCCTTTACCAGCTCATTTTGGACAATGTGA...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FQNFCTGNYYLLACSSDCRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR TCA 90 bp GGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATGTCACAACCATTTCATaGCCTCCATTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: GGHKAAVSTVRAHQIFLNVTTIS*PPFTEQ
Trigger: TTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGAC...ATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGTCACAACCATTTCATaGCCTCCATTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPVTTIS*PPFTEQ
Trigger: TTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGAC...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGATGAAATGGTATGGATaGCAGTGGTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVMKWYG*QWLTAK
Trigger: CTTGGCTGTCAACCACTGTCATCCATACCATTTCAT...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGAGGGTATGCACAGAATaGGGTGTATGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: GRPESFQAINRMADKPSMRVCTE*GVWAKR
Trigger: TCTCTTAGCCCATACACCTCATTCTGTGCATACCCT...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGCAAATCAAACTTCTCTGTCCTGACAGTACACTGTCATGTGAACACCCTGAATAGGGTATGCACAGAATaGGGTGTATGGGCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SKSNFSVLTVHCHVNTLNRVCTE*GVWAKR
Trigger: TCTCTTAGCCCATACACCTCATTCTGTGCATACCCT...ATTCAGGGTGTTCACATGACAGTGTACTGTCAGGACAGAGAAGTTTGATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp AAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCTGGCCCAGAAAGCGGTaGACTAGCCAAGGGATGAGA +
Preference number: 4 (lower is better)
Translates to: KKWNFQNFCTGNYYLLACWPRKR*TSQGMR
Trigger: TCTCATCCCTTGGCTAGTTCACCGCTTTCTGGGCCA...GCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp TGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCTGCCAATACCCGTACTTTGTGCTTaGGTTGAGTGCTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CGMCTRNTSRTLVFFLPIPVLCA*VECCPE
Trigger: TTCTGGACAGCACTCAACTCAAGCACAAAGTACGGG...TATTGGCAGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTGGATCACACAAACTGTaGCATATTAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLGSHKL*HIKDEG
Trigger: ACCTTCATCCTTAATATGTCACAGTTTGTGTGATCC...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGTCCCTTTCCCAGACCTaGACTGGCCTTAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: SISSATGIKVFRRHQNLVSLSQT*TGLSRE
Trigger: CTCTCTACTAAGGCCAGTTCAGGTCTGGGAAAGGGA...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGACTATCCACATTCTGTaGCACAACTCACTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRTIHIL*HNSLFK
Trigger: CTTGAAAAGTGAGTTGTGTCACAGAATGTGGATAGT...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCTGCAATAACCTCATGTaGGGCAGCTACACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEICNNLM*GSYTRG
Trigger: GCCCCTGGTGTAGCTGCCTCACATGAGGTTATTGCA...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKISRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ATATGCTGTTCTTTACTAACACTCTCATCTCTACACTGCAACTGTGGCAGATGGCTGCAGACCAATGGTTaGAAAGTTAGGCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: ICCSLLTLSSLHCNCGRWLQTNG*KVRLSI
Trigger: GATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAG...CCATCTGCCACAGTTGCAGTGTAGAGATGAGAGTGTTAGTAAAGAACAGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATGGAAACAAGAGAGCCTaGTGCATTCACACTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNGNKRA*CIHTQS
Trigger: GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCC...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCATGTACTGCTCATTTGTaGTTTAGCTCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPCTAHL*FSSAHS
Trigger: GCTGTGTGCAGAGCTAAAGCACAAATGAGCAGTACA...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCATTGTGTAAGGAGCACTaGACTCCCATAAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPLCKEH*TPIKGF
Trigger: AAAACCTTTTATGGGAGTGCAGTGCTCCTTACACAA...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTGCGGAGTTTCAAAGTCGAGCTCGTCGTaGGCGCCACAGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: CQYQFLLFEVLYLNCGVSKSSSS*APQFAV
Trigger: TACTGCAAACTGTGGCGCCCACGACGAGCTCGACTT...TGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGTGTAATTTGAATACTTaGGCACTCAAAGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLCNLNT*ALKGFG
Trigger: CCCAAACCCTTTGAGTGCCCAAGTATTCAAATTACA...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTGTAATTTGAATACTTaGGCACTCAAAGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPCNLNT*ALKGFG
Trigger: CCCAAACCCTTTGAGTGCCCAAGTATTCAAATTACA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp GGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATATTTTCCTGGTAGTATaGCAGCTTGATCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GGHKAAVSTVRAHQIFLNIFLVV*QLDLQK
Trigger: CTTCTGAAGATCAAGCTGCCATACTACCAGGAAAAT...ATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAATTTTCCTGGTAGTATaGCAGCTTGATCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPIFLVV*QLDLQK
Trigger: CTTCTGAAGATCAAGCTGCCATACTACCAGGAAAAT...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTATTTTCCTGGTAGTATaGCAGCTTGATCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPIFLVV*QLDLQK
Trigger: CTTCTGAAGATCAAGCTGCCATACTACCAGGAAAAT...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTATTTTCCTGGTAGTATaGCAGCTTGATCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLIFLVV*QLDLQK
Trigger: CTTCTGAAGATCAAGCTGCCATACTACCAGGAAAAT...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAGGTGATAAACTCCCTTaGTCATCTGAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPGDKLP*SSEHSS
Trigger: AGAGCTGTGTTCAGATGACCAAGGGAGTTTATCACC...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAACGAAATATAGGGGTGTaGCCAGGCTTTGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQRNIGV*PGFGLL
Trigger: GAGCAAACCAAAGCCTGGCCACACCCCTATATTTCG...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTTTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: FCTGNYYLLACSSDCLPSFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...ACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCTGCTGGGTTATGATATaGAGGAACTTCAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFCWVMI*RNFKDN
Trigger: ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCA...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAGGATGCATATGTTTGTaGGATGGAGCAAATCAAACT +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPGCICL*DGANQT
Trigger: AGTTTGATTTGCTCCATCCCACAAACATATGCATCC...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAAGAATGAAATGGTATaGATGACAGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPKNEMV*MTVVDS
Trigger: GCTGTCAACCACTGTCATCCATACCATTTCATTCTT...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGAATGAAATGGTATaGATGACAGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCKNEMV*MTVVDS
Trigger: GCTGTCAACCACTGTCATCCATACCATTTCATTCTT...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCAGAATGCATTCTGGTaGCTGGAGACGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHQNAFW*LETVMR
Trigger: CCTCATCACCGTCTCCAGCCACCAGAATGCATTCTG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTGAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: FVLAIIISWLAVATVFPVRLSIF*FRFNAH
Trigger: GTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCT...CACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPRLSIF*FRFNAH
Trigger: GTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCT...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGATTTGCATAGTCCAATaGATGTGTGCTTTAACACCA +
Preference number: 4 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLICIVQ*MCALTP
Trigger: TGGTGTTAAAGCACACATCCATTGGACTATGCAAAT...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
3UTR CAA 72 bp GTGCCCAGTTGCTCAGTGCTGCTAGTAGAAATTGATTaGCATAGTCCAATGGATGTGTGCTTTAACACCACT +
Preference number: 4 (lower is better)
Translates to: VPSCSVLLVEID*HSPMDVCFNTT
Trigger: AGTGGTGTTAAAGCACACATCCATTGGACTATGCAAATCAATTTCTACTAGCAGCACTGAGCAACTGGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCGAGATAGATGTAATTTaGATACTTGGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPEIDVI*ILGHSK
Trigger: CTTTGAGTGCCCAAGTATTCAAATTACATCTATCTC...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAGCTTCATTCAACTCTaGGTCCACATCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCSFIQL*VHIIIN
Trigger: ATTTATGATGATGTGGACTCAGAGTTGAATGAAGCT...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCAGCTTCATTCAACTCTaGGTCCACATCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: APWETEIWDMSLPIISFTSFIQL*VHIIIN
Trigger: ATTTATGATGATGTGGACTCAGAGTTGAATGAAGCT...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR TCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTAGCTTCATTCAACTCTaGGTCCACATCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLSFIQL*VHIIIN
Trigger: ATTTATGATGATGTGGACTCAGAGTTGAATGAAGCT...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGTCTCTACACAGTACTaGAATGGAAAAACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIVSTQY*NGKTAG
Trigger: CCCTGCAGTTTTTCCATTTCAGTACTGTGTAGAGAC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAAAGTTTTCCTTGTTTTaGGAGGGATGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQKFSLF*EGCQSL
Trigger: TAGAGACTGACATCCCTCTCAAAACAAGGAAAACTT...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCGACTGTCTTCCCAGTaGTTCGATGCACCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHRLSSQ*FDAPGK
Trigger: TTTACCAGGTGCATCGAATCACTGGGAAGACAGTCG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTTCCACTGGGCTGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCCTTGACATTTTTCCCTaGTTATCTTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: FPLGCGMCTRNTSRTLVFLDIFP*LSSLLP
Trigger: AGGTAGAAGGGAAGATAATCAGGGAAAAATGTCAAG...GAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACAGCCCAGTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTGTGGCAGATGGGATaGGGTCACCATGGATGCATA +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLLWQMG*GHHGCI
Trigger: TATGCATCCATGGTGACCTCATCCCATCTGCCACAG...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGGTGTTGGTGTGACTTaGAAAGGCTGGTGTACAATT +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIGVGVT*KGWCTI
Trigger: AATTGTACACCAGCCTTTTCAAGTCACACCAACACC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATGGTGTTGGTGTGACTTaGAAAGGCTGGTGTACAATT +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNGVGVT*KGWCTI
Trigger: AATTGTACACCAGCCTTTTCAAGTCACACCAACACC...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGCAAATCAAACTTCTCTGTCCTGACAGTACACTGTCATGTGAACACCCTGAATACAATGATATCCCATTaGTTGCAGATGAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SKSNFSVLTVHCHVNTLNTMISH*LQMRQG
Trigger: ACCCTGCCTCATCTGCAATCAATGGGATATCATTGT...ATTCAGGGTGTTCACATGACAGTGTACTGTCAGGACAGAGAAGTTTGATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGCCTGTATTTGAACAATaGTATCCCATTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLPVFEQ*YPIDCR
Trigger: TCTGCAATCAATGGGATATCATTGTTCAAATACAGG...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTCCTGTATTTGAACAATaGTATCCCATTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPPVFEQ*YPIDCR
Trigger: TCTGCAATCAATGGGATATCATTGTTCAAATACAGG...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCCTGTATTTGAACAATaGTATCCCATTGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFPVFEQ*YPIDCR
Trigger: TCTGCAATCAATGGGATATCATTGTTCAAATACAGG...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCGGATCACACAAACTGTaGCATATTAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCGSHKL*HIKDEG
Trigger: ACCTTCATCCTTAATATGTCACAGTTTGTGTGATCC...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCCCATCAGGTGGAAATaGCGCTGGATCACACAAACT +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHPIRWK*RWITQT
Trigger: AGTTTGTGTGATCCAGCGTCATTTCCACCTGATGGG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTATTTCCTATAAATCTATaGACGTCTTCAGGACACATG +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLFPINL*TSSGHM
Trigger: CATGTGTCCTGAAGACGTTCATAGATTTATAGGAAA...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTTCTTACCCAGGGTCCTaGGGGAAAAAGCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKISYPGS*GKKQFQ
Trigger: TTGAAATTGCTTTTTCCCTCAGGACCCTGGGTAAGA...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTACTTAAAGATCCATTCTaGATACCAAAAACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLLKDPF*IPKTGL
Trigger: AAGCCCTGTTTTTGGTATTCAGAATGGATCTTTAAG...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCTCTTCTCTGTGTTCTTaGTTCATCAAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCSSLCS*FIKTGV
Trigger: TACACCAGTTTTGATGAAGCAAGAACACAGAGAAGA...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTTCTTCTCTGTGTTCTTaGTTCATCAAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPSSLCS*FIKTGV
Trigger: TACACCAGTTTTGATGAAGCAAGAACACAGAGAAGA...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGTCTTCTCTGTGTTCTTaGTTCATCAAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRSSLCS*FIKTGV
Trigger: TACACCAGTTTTGATGAAGCAAGAACACAGAGAAGA...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ATTAGTTTGCATAGGCTGATAGGAAGACCCCACAGGAGGTGTTGGTGTGACTTGTCTTCTCTGTGTTCTTaGTTCATCAAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: ISLHRLIGRPHRRCWCDLSSLCS*FIKTGV
Trigger: TACACCAGTTTTGATGAAGCAAGAACACAGAGAAGA...CAAGTCACACCAACACCTCCTGTGGGGTCTTCCTATCAGCCTATGCAAACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTCTTCTCTGTGTTCTTaGTTCATCAAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLSSLCS*FIKTGV
Trigger: TACACCAGTTTTGATGAAGCAAGAACACAGAGAAGA...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp AAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTGAGTGCTGTCCAGAATaGATTCTGGTGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KWNFQNFCTGNYYLLACSECCPE*ILVAGD
Trigger: GTCTCCAGCCACCAGAATGCATTCTGGACAGCACTC...ACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGTTACCAAAAGGCTATaGTCTGGAATGTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: EGTKGIARGTLAITSCEAVTKRL*SGMSFY
Trigger: ATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAAC...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAGGCATCAAAATTTGGTaGATAGCAACTCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: HVSLCISSKQKATHSIPQGIKIW*IATLDH
Trigger: ATGATCCAGAGTTGCTATGCACCAAATTTTGATGCC...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAACTAAGTGGTTTCTCTaGTTTGACAAAACCATCATC +
Preference number: 4 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPTKWFL*FDKTII
Trigger: GATGATGGTTTTGTCAAAGCAGAGAAACCACTTAGT...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCTGTAATTTGAATACTTaGGCACTCAAAGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCCNLNT*ALKGFG
Trigger: CCCAAACCCTTTGAGTGCCCAAGTATTCAAATTACA...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACAACAAACTTCAGCACTaGAGTGCCTCCGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHNKLQH*SASVSH
Trigger: GTGGGAAACGGAGGCACTCCAGTGCTGAAGTTTGTT...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp GCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATCCAGGGACTCAGCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: AAVSTVRAHQIFLNPGTQLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...CTGAGTCCCTGGATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp GCAAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCTGCTGGGTTATGATATaGAGGAACTTCAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: AKFISPKLKQPMLLLFFCCWVMI*RNFKDN
Trigger: ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCA...GCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CCA 90 bp TGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTGCGGAGTTTCAGGGATGAGAAGCTGCTaGGGAAGCTGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CQYQFLLFEVLYLNCGVSGMRSC*GSCCSR
Trigger: TCTGCTACAACAGCTTCCCCAGCAGCTTCTCATCCC...TGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp TGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTGCGGAGTTTCACAGAATGCATTCTGGTaGCTGGAGACGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: CQYQFLLFEVLYLNCGVSQNAFW*LETVMR
Trigger: CCTCATCACCGTCTCCAGCCACCAGAATGCATTCTG...TGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCGTCCAGAATGCATTCTaGTGGCTGGAGACGGTGATG +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEIVQNAF*WLETVM
Trigger: CATCACCGTCTCCAGCCACCAGAATGCATTCTGGAC...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGCTGAGAAGTTGGTGGTaGACACAAGGCTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SISSATGIKVFRRHQNLVLRSWW*TQGCSK
Trigger: CTTACTGCAGCCTTGTGTCCACCACCAACTTCTCAG...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTCAGTCATGACTAAGTaGTTTCTCTGCTTTGACAAA +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLSVMTK*FLCFDK
Trigger: TTTGTCAAAGCAGAGAAACCACTTAGTCATGACTGA...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
3UTR CAA 72 bp GTGTATGGGCTAAGAGATGTCCTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGGATGACAGTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: VYGLRDVLLSLN*KNEMVWMTVVD
Trigger: GTCAACCACTGTCATCCATACCATTTCATTCTTCAAATTCAGGCTCAACAGGACATCTCTTAGCCCATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp GCACAGAATGAGGTGTATGGGCTAAGAGATGTCCTGTaGAGCCTGAATTTGAAGAATGAAATGGTATGGATG +
Preference number: 4 (lower is better)
Translates to: AQNEVYGLRDVL*SLNLKNEMVWM
Trigger: CATCCATACCATTTCATTCTTCAAATTCAGGCTCAACAGGACATCTCTTAGCCCATACACCTCATTCTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCAGGAGGTGTTGGTGTaGCTTGAAAAGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLQEVLV*LEKAGV
Trigger: TACACCAGCCTTTTCAAGTCACACCAACACCTCCTG...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGATGGATGACAGTGGTTaGCAGCCAAGATTCACTAAA +
Preference number: 4 (lower is better)
Translates to: PESFQAINRMADKPSMPVMDDSG*QPRFTK
Trigger: TTTAGTGAATCTTGGCTGTCAACCACTGTCATCCAT...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAATGAAATGGTATGGATaGCAGTGGTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQMKWYG*QWLTAK
Trigger: CTTGGCTGTCAACCACTGTCATCCATACCATTTCAT...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp TGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WNFQNFCTGNYYLLACSSSRCFY*PSATFS
Trigger: ACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACT...GCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562171.1
CDS-3UTR GCA 90 bp AAAAGGTTCTACGACCAGATGACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: KRFYDQMTQTGSALHSLLVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...TAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGTCATCTGGTCGTAGAACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCTGCAGACCAATGGTTaGAAAGTTAGGCTCTCGATC +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHLQTNG*KVRLSI
Trigger: GATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGGTTACCAAAAGGCTATaGTCTGGAATGTCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRVTKRL*SGMSFY
Trigger: ATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAAC...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATACAGCCAAAGGCAGATaGTTCTGTTTGGAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNTAKGR*FCLEKV
Trigger: AACCTTTTCCAAACAGAAGCATCTGCCTTTGGCTGT...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGAGCCATGTTTCTCTGTaGATCTCCAGTAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRSHVSL*ISSKQK
Trigger: CTTCTGCTTACTGGAGATGCACAGAGAAACATGGCT...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGGGCACTCAAAGGGTTTaGGACCACCTAATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLGTQRV*DHLMGY
Trigger: ATAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCC...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: VSKSDVRIFLITCLASFFLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp TGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCTTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: WNFQNFCTGNYYLLACSSFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...GCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTAGGCTGGTGTACAATTaGAGAAGGAATCATATGCTG +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIRLVYN*RRNHML
Trigger: CAGCATATGATTCCTTCTCCAATTGTACACCAGCCT...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAAATAGGAAGACAAGTTaGTCCATTGTACACAACATT +
Preference number: 4 (lower is better)
Translates to: KGIARGTLAITSCEAATPNRKTS*SIVHNI
Trigger: AATGTTGTGTACAATGGACCAACTTGTCTTCCTATT...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTAATAGGAAGACAAGTTaGTCCATTGTACACAACATT +
Preference number: 4 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLNRKTS*SIVHNI
Trigger: AATGTTGTGTACAATGGACCAACTTGTCTTCCTATT...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCGGGATGAGAAGCTGCTaGGGAAGCTGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGGMRSC*GSCCSR
Trigger: TCTGCTACAACAGCTTCCCCAGCAGCTTCTCATCCC...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TCCATTTACAGAACAACTGTTGATACTGTACTTCTCAATATGAGGAAGTTCTTGGTCCAGAATGCATTCTaGTGGCTGGAGACGGTGATG +
Preference number: 4 (lower is better)
Translates to: SIYRTTVDTVLLNMRKFLVQNAF*WLETVM
Trigger: CATCACCGTCTCCAGCCACCAGAATGCATTCTGGAC...CAAGAACTTCCTCATATTGAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCGCTCTGCACACAGCCTaGCCTCTAGCTAGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGALHTA*PLARVR
Trigger: TCTAACTCTAGCTAGAGGCCAGGCTGTGTGCAGAGC...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGAGGGTGTCTTTGGTGTaGAGGGTCAGGTTATCACTT +
Preference number: 4 (lower is better)
Translates to: SISSATGIKVFRRHQNLVRVSLV*RVRLSL
Trigger: AAGTGATAACCTGACCCTCCACACCAAAGACACCCT...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCACTGCAGCTGTAACTGCTGGGTTATGATATGGAGGAACTTCAAGGACAATCTTTTTCATGACACTTaGGAGAATAAAGTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LHCSCNCWVMIWRNFKDNLFHDT*ENKVPE
Trigger: TTCAGGGACTTTATTCTCCCAAGTGTCATGAAAAAG...ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCAGTTACAGCTGCAGTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp AATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGTCTTCCCAGTGATTCG +
Preference number: 4 (lower is better)
Translates to: NFQNFCTGNYYL*ACSSDCLPSDS
Trigger: CGAATCACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
3UTR CAA 72 bp GAGATCTTTGTCCTGTATTTGAACAATGATATCCCATaGATTGCAGATGAGGCAGGGTATGCACAGAATGAG +
Preference number: 4 (lower is better)
Translates to: EIFVLYLNNDIP*IADEAGYAQNE
Trigger: CTCATTCTGTGCATACCCTGCCTCATCTGCAATCAATGGGATATCATTGTTCAAATACAGGACAAAGATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp CAGCCACTGGAGAAGAAAGAGATCTTTGTCCTGTATTaGAACAATGATATCCCATTGATTGCAGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: QPLEKKEIFVLY*NNDIPLIADEA
Trigger: TGCCTCATCTGCAATCAATGGGATATCATTGTTCAAATACAGGACAAAGATCTCTTTCTTCTCCAGTGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp ACTGTTGATACTGTACTTCTCAATATGAGGAAGTTCTaGAGCAGACCGCTGGGCTGGCTGACATATTATTTT +
Preference number: 4 (lower is better)
Translates to: TVDTVLLNMRKF*SRPLGWLTYYF
Trigger: AAAATAATATGTCAGCCAGCCCAGCGGTCTGCTCAAGAACTTCCTCATATTGAGAAGTACAGTATCAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568466.6
CDS-3UTR TCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGGAACTGAAAGAAACTaGTCACCACATGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIGTERN*SPHESF
Trigger: GAAAGATTCATGTGGTGATCAGTTTCTTTCAGTTCC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp ATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTTCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISRTFVLAIIISWLAVATSHCPK*AGKGQS
Trigger: AGACTGGCCTTTACCAGCTCATTTTGGACAATGTGA...AGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562171.1
CDS-3UTR TCA 90 bp TCCAGTCACAACCATTTCATGACCTCCATTTACAGAACAACTGTTGATACTGTAGGTGTTGGTGTGACTTaGAAAGGCTGGTGTACAATT +
Preference number: 4 (lower is better)
Translates to: SSHNHFMTSIYRTTVDTVGVGVT*KGWCTI
Trigger: AATTGTACACCAGCCTTTTCAAGTCACACCAACACC...TACAGTATCAACAGTTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGACTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTATGAAATGGTATGGATaGCAGTGGTTGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: EIARLPRKLPKGYALECLMKWYG*QWLTAK
Trigger: CTTGGCTGTCAACCACTGTCATCCATACCATTTCAT...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGATTCCAACACTTCAATaGTGGAATGGTCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PESFQAINRMADKPSMPVIPTLQ*WNGLFS
Trigger: TGAGAAGAGACCATTCCATCATTGAAGTGTTGGAAT...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCCATTTACAGAACAACTGTTGATACTGTACTTCTCAATATGAGGAAGTTCTTGGACCGCTGGGCTGGCTaGCATATTATTTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SIYRTTVDTVLLNMRKFLDRWAG*HIIFRK
Trigger: CTTCCTGAAAATAATATGTCAGCCAGCCCAGCGGTC...CAAGAACTTCCTCATATTGAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568466.6
CDS-3UTR GCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGGAGTGGCAAGGAGATTaGCTGGGTGATAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLEWQGD*LGDNEC
Trigger: ACACTCATTATCACCCAGGCAATCTCCTTGCCACTC...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCACTGCAGCTGTAACTaGTGGGTTATGATATGGAGG +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLHCSCN*WVMIWR
Trigger: CCTCCATATCATAACCCAGCAGTTACAGCTGCAGTG...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCATTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR GCA 90 bp ACTGGGCTGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCTTTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: TGLWDVYTKHKSYSSILSFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...AGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACAGCCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCCTCTCATCTCTACACTaGAACTGTGGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEILSSLH*NCGRWD
Trigger: ATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAG...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCTGCCAATATCAGTTTCTCTCTCATCTCTACACTaGAACTGTGGCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: CTRNTSRTLVFFLPISVSLSSLH*NCGRWD
Trigger: ATCCCATCTGCCACAGTTGCAGTGTAGAGATGAGAG...AGAAACTGATATTGGCAGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQSKVMS*RPMVAK
Trigger: CTTTGCAACCATTGGTCTGCAGGACATCACTTTAGA...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTCTGCTCCTGTTCTTTTaGCAAATCTACCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSLLLFF*QIYPRP
Trigger: AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAG...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGGCATCAAAATTTGGTaGATAGCAACTCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIGIKIW*IATLDH
Trigger: ATGATCCAGAGTTGCTATGCACCAAATTTTGATGCC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp ACACAAACAGGAAGCGCACTCCACAGCCTACTAGTTTTTATGATGGCAAGAAATTTGTGTAAGGAGCACTaGACTCCCATAAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TQTGSALHSLLVFMMARNLCKEH*TPIKGF
Trigger: AAAACCTTTTATGGGAGTGCAGTGCTCCTTACACAA...ATTTCTTGCCATCATAAAAACTAGTAGGCTGTGGAGTGCGCTTCCTGTTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAGGCACTCAAAGGGTTTaGGACCACCTAATGGGCTAT +
Preference number: 4 (lower is better)
Translates to: ARLPRKLPKGYALECLFIGTQRV*DHLMGY
Trigger: ATAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCC...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCAACAAACTTCAGCACTaGAGTGCCTCCGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGNKLQH*SASVSH
Trigger: GTGGGAAACGGAGGCACTCCAGTGCTGAAGTTTGTT...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTATTTTCCTGGTAGTATaGCAGCTTGATCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIIFLVV*QLDLQK
Trigger: CTTCTGAAGATCAAGCTGCCATACTACCAGGAAAAT...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGTTTTCCACTGGGCTGTaGGATGTGTACACGAAACAC +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLFSTGL*DVYTKH
Trigger: GTGTTTCGTGTACACATCCCACAGCCCAGTGGAAAA...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp ATGACCTCCATTTACAGAACAACTGTTGATACTGTACTTCTCAATATGAGGAAGGGGATGAGGTCACCATaGATGCATATGTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: MTSIYRTTVDTVLLNMRKGMRSP*MHMFVG
Trigger: TCCCACAAACATATGCATCCATGGTGACCTCATCCC...CTTCCTCATATTGAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGAGGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp GGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGAGGCTGGTGTACAATTaGAGAAGGAATCATATGCTG +
Preference number: 4 (lower is better)
Translates to: GISRTFVLAIIISWLAVARLVYN*RRNHML
Trigger: CAGCATATGATTCCTTCTCCAATTGTACACCAGCCT...CGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGTGGGAAACAGAAATCTaGGACATGTCTCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRWETEI*DMSLPI
Trigger: AATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCA...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCGTGCTCAGAGCCTTCTaGGGAAAAGGCTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEIVLRAF*GKGWFL
Trigger: TAAAAACCAGCCTTTTCCCCAGAAGGCTCTGAGCAC...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTGAAGGCATCAAAATTTaGTGCATAGCAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKIEGIKI*CIATLD
Trigger: ATCCAGAGTTGCTATGCACCAAATTTTGATGCCTTC...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GGTCGTAAATATCGATCATCTGCTGTCCCAATAAACATTTGTAGATTTATTGGCAGCAGACCGCTGGGCTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRKYRSSAVPINICRFIGSRPLG*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGCCCAGCGGTCTGCT...GCCAATAAATCTACAAATGTTTATTGGGACAGCAGATGATCGATATTTACGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568466.6
CDS-3UTR TCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGGAGCTGAAACGATGGTaGCAAAACAGAAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLELKRW*QNRRVR
Trigger: TCTCACTCTTCTGTTTTGTCACCATCGTTTCAGCTC...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAAAGTTTTCCTTGTTTTaGGAGGGATGTCAGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQKFSLF*EGCQSL
Trigger: TAGAGACTGACATCCCTCTCAAAACAAGGAAAACTT...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTGTCACAACCATTTCATaGCCTCCATTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: FQNFCTGNYYLLACSSDCVTTIS*PPFTEQ
Trigger: TTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGAC...ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000568466.6
CDS-3UTR TCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEIVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCGTAACTGCTGGGTTATaGTATGGAGGAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KKWNFQNFCTGNYYLLACVTAGL*YGGTSR
Trigger: CCTTGAAGTTCCTCCATATCATAACCCAGCAGTTAC...GCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATACAGCAGCACCACACATaGACCCAAAGACATGTTCTT +
Preference number: 4 (lower is better)
Translates to: ARLPRKLPKGYALECLFIQQHHT*TQRHVL
Trigger: AAGAACATGTCTTTGGGTTCATGTGTGGTGCTGCTG...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTTACCATCATCTAAAGTaGTGTCCTGCAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: KWNFQNFCTGNYYLLACSYHHLK*CPADQW
Trigger: CCATTGGTCTGCAGGACATCACTTTAGATGATGGTA...ACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAGTGGTTTCTCTGCTTTaGCAAAACCATCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQVVSLL*QNHHLK
Trigger: CTTTAGATGATGGTTTTGTCAAAGCAGAGAAACCAC...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR GCA 90 bp CTTGGGAGAATAAAGTCCCTGAATCTTCACTACTTCAAGAACATATCAGAGATGTCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LGRIKSLNLHYFKNISEMSKVMS*RPMVAK
Trigger: CTTTGCAACCATTGGTCTGCAGGACATCACTTTAGA...CATCTCTGATATGTTCTTGAAGTAGTGAAGATTCAGGGACTTTATTCTCCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR GCA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCAACAAGAGAGCCTGCTaGATTCACACTCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGNKRAC*IHTQST
Trigger: GGTGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTT...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp TGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: WNFQNFCTGNYYLLACSSAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...GCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAGGGATGAGGTCACCATaGATGCATATGTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ARLPRKLPKGYALECLFIGMRSP*MHMFVG
Trigger: TCCCACAAACATATGCATCCATGGTGACCTCATCCC...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATAGGAAGACAAGTTaGTCCATTGTACACAACATT +
Preference number: 4 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPNRKTS*SIVHNI
Trigger: AATGTTGTGTACAATGGACCAACTTGTCTTCCTATT...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR TCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGGAGATAGATGTAATTTaGATACTTGGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: FLKLFSAMFLCASPVSRREIDVI*ILGHSK
Trigger: CTTTGAGTGCCCAAGTATTCAAATTACATCTATCTC...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGAGCTTCATTCAACTCTaGGTCCACATCATCATAAAT +
Preference number: 4 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRSFIQL*VHIIIN
Trigger: ATTTATGATGATGTGGACTCAGAGTTGAATGAAGCT...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTGTCACAACCATTTCATaGCCTCCATTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: EIARLPRKLPKGYALECLVTTIS*PPFTEQ
Trigger: TTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGAC...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCTTGACATTTTTCCCTaGTTATCTTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHLDIFP*LSSLLP
Trigger: AGGTAGAAGGGAAGATAATCAGGGAAAAATGTCAAG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTGGATCACACAAACTGTaGCATATTAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: EIARLPRKLPKGYALECLGSHKL*HIKDEG
Trigger: ACCTTCATCCTTAATATGTCACAGTTTGTGTGATCC...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TCCAGTCACAACCATTTCATGACCTCCATTTACAGAACAACTGTTGATACTGTAGGATCACACAAACTGTaGCATATTAAGGATGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSHNHFMTSIYRTTVDTVGSHKL*HIKDEG
Trigger: ACCTTCATCCTTAATATGTCACAGTTTGTGTGATCC...TACAGTATCAACAGTTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGACTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR TCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAGAGGCTTTTAATTCTTaGGGGCACAAAGGGTATTGC +
Preference number: 4 (lower is better)
Translates to: ARLPRKLPKGYALECLFIEAFNS*GHKGYC
Trigger: GCAATACCCTTTGTGCCCTCAAGAATTAAAAGCCTC...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAGGTGATAAACTCCCTTaGTCATCTGAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: ARLPRKLPKGYALECLFIGDKLP*SSEHSS
Trigger: AGAGCTGTGTTCAGATGACCAAGGGAGTTTATCACC...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTGCAATTATTATCTCTTaGCTTGCAGTAGCGACTGTC +
Preference number: 4 (lower is better)
Translates to: KWNFQNFCTGNYYLLACSAIIIS*LAVATV
Trigger: GACAGTCGCTACTGCAAGCCAAGAGATAATAATTGC...ACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CCA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKILHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CACAACCATTTCATGACCTCCATTTACAGAACAACTGTTGATACTGTACTTCTCAAGAATGAAATGGTATaGATGACAGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: HNHFMTSIYRTTVDTVLLKNEMV*MTVVDS
Trigger: GCTGTCAACCACTGTCATCCATACCATTTCATTCTT...GAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGAGGTCATGAAATGGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACAAGAATGAAATGGTATaGATGACAGTGGTTGACAGC +
Preference number: 4 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHKNEMV*MTVVDS
Trigger: GCTGTCAACCACTGTCATCCATACCATTTCATTCTT...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CCA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCAGGCTCTCGATCTTCTaGTTCAGGTTTAATGCTCAC +
Preference number: 4 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGRLSIF*FRFNAH
Trigger: GTGAGCATTAAACCTGAACCAGAAGATCGAGAGCCT...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGGGAACTGAAAGAAACTaGTCACCACATGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLGTERN*SPHESF
Trigger: GAAAGATTCATGTGGTGATCAGTTTCTTTCAGTTCC...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGGTCACAACCATTTCATaGCCTCCATTTACAGAACAA +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLVTTIS*PPFTEQ
Trigger: TTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGAC...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR TCA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTCTTGACATTTTTCCCTaGTTATCTTCCCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSLDIFP*LSSLLP
Trigger: AGGTAGAAGGGAAGATAATCAGGGAAAAATGTCAAG...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCTGCCAATAGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: CGMCTRNTSRTLVFFLPIVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...TATTGGCAGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTTGTAATTTGAATACTTaGGCACTCAAAGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSCNLNT*ALKGFG
Trigger: CCCAAACCCTTTGAGTGCCCAAGTATTCAAATTACA...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp AAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTTGCTGGGTTATGATATaGAGGAACTTCAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: KWNFQNFCTGNYYLLACSCWVMI*RNFKDN
Trigger: ATTGTCCTTGAAGTTCCTCCATATCATAACCCAGCA...ACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTGGATGCATATGTTTGTaGGATGGAGCAAATCAAACT +
Preference number: 4 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSGCICL*DGANQT
Trigger: AGTTTGATTTGCTCCATCCCACAAACATATGCATCC...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp ATGACCTCCATTTACAGAACAACTGTTGATACTGTACTTCTCAATATGAGGAAGGGATGCATATGTTTGTaGGATGGAGCAAATCAAACT +
Preference number: 4 (lower is better)
Translates to: MTSIYRTTVDTVLLNMRKGCICL*DGANQT
Trigger: AGTTTGATTTGCTCCATCCCACAAACATATGCATCC...CTTCCTCATATTGAGAAGTACAGTATCAACAGTTGTTCTGTAAATGGAGGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CCA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGGGATGCATATGTTTGTaGGATGGAGCAAATCAAACT +
Preference number: 4 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLGCICL*DGANQT
Trigger: AGTTTGATTTGCTCCATCCCACAAACATATGCATCC...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
3UTR CAA 72 bp AAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATaGCAAGATTACCTAGAAAGTTACCAAAAGGCTATG +
Preference number: 4 (lower is better)
Translates to: KKQFQHGASMER*QDYLESYQKAM
Trigger: CATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCCTTAAAGATCCATTCTaGATACCAAAAACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEILKDPF*IPKTGL
Trigger: AAGCCCTGTTTTTGGTATTCAGAATGGATCTTTAAG...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp AGTGATCTGCTGAAGAATAGACCTTTTTCTCTAACTAACTTTAGGGGAGAAATCTTTTCCTCTTGCCATTaGAAAGATAAAAGTGCACCT +
Preference number: 4 (lower is better)
Translates to: SDLLKNRPFSLTNFRGEIFSSCH*KDKSAP
Trigger: AGGTGCACTTTTATCTTTGCAATGGCAAGAGGAAAA...GATTTCTCCCCTAAAGTTAGTTAGAGAAAAAGGTCTATTCTTCAGCAGATCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CCA 90 bp CTGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTGCGGAGTTTCCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: LPISVSPFRSSISELRSFLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...GAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp TGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCCTGCACAATCAATACTaGCTGACATATTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: WNFQNFCTGNYYLLACSSLHNQY*LTYYFQ
Trigger: CTGAAAATAATATGTCAGCCAGTATTGATTGTGCAG...GCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTATTTGCATAGTCCAATaGATGTGTGCTTTAACACCA +
Preference number: 4 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSICIVQ*MCALTP
Trigger: TGGTGTTAAAGCACACATCCATTGGACTATGCAAAT...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR TCA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAGAGATAGATGTAATTTaGATACTTGGGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: ARLPRKLPKGYALECLFIEIDVI*ILGHSK
Trigger: CTTTGAGTGCCCAAGTATTCAAATTACATCTATCTC...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR GCA 90 bp TGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCTGCCAATATCAGTTTCTGTTCTATATCTGAATTaGGGAGTTTCAAAATACCTG +
Preference number: 4 (lower is better)
Translates to: CTRNTSRTLVFFLPISVSVLYLN*GVSKYL
Trigger: CAGGTATTTTGAAACTCCGCAATTCAGATATAGAAC...AGAAACTGATATTGGCAGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CCA 90 bp AAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAATAGGAAGACAAGTTaGTCCATTGTACACAACATT +
Preference number: 4 (lower is better)
Translates to: KKWNFQNFCTGNYYLLACNRKTS*SIVHNI
Trigger: AATGTTGTGTACAATGGACCAACTTGTCTTCCTATT...GCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
3UTR CAA 72 bp ATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATaGCGGAGTTTCAAAATACCTGCACAATCAATACTG +
Preference number: 4 (lower is better)
Translates to: ISVSPFRSSISE*RSFKIPAQSIL
Trigger: CAGTATTGATTGTGCAGGTATTTTGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS GCA 90 bp GTGGGCGCCACAGTTTGCAGTAGTCATCGGCGTGGCCCAGGGTGCTaGAGCTCCTCCTCAGGCGGCGGCGGCGGCAGCGGCAAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: VGATVCSSHRRGPGC*SSSSGGGGGSGKRR
Trigger: CCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAGGAGCTGCAGCACCCTGGGCCACGCCGATGACTACTGCAAACTGTGGCGCCCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346183.8
ENST00000349223.9
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS GCA 90 bp GCCGCGCGCCGAGCAGCACCAGGAACCGCAGCCGCCCGCCACCGGTaGCTAAGCCTCCACTGTCGGCTTAGCCAATGTTCCCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: AARRAAPGTAAARHR*LSLHCRLSQCSPPP
Trigger: GGGCGGCGGGGAACATTGGCTAAGCCGACAGTGGAGGCTTAGGCACCGGTGGCGGGCGGCTGCGGTTCCTGGTGCTGCTCGGCGCGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346183.8
ENST00000561714.5
ENST00000568466.6
ENST00000575270.5
CDS GCA 90 bp GGCGGCAGCGGCAAGCGGCGGCAGCAGCTCCTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAGAGGTCGCGACTCCACGGCAAACTT +
Preference number: 5 (lower is better)
Translates to: GGSGKRRQQLLNAAS*RAARAKRSRLHGKL
Trigger: AAGTTTGCCGTGGAGTCGCGACCTCTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAGGAGCTGCTGCCGCCGCTTGCCGCTGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346183.8
ENST00000349223.9
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS-3UTR CAA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACAGGGGGATGTGGGCCTaGATGAGGGTCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNRGMWA*MRVLRL
Trigger: CAGCCTCAGGACCCTCATCAAGGCCCACATCCCCCT...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS TCA 90 bp GACCCTTCTCCTCATTGGGCGGAGCTCATGTCGAGGAAGGGGTGCTaGAGCACTGAGGTTCTGGGTTCGGTGATGTGGGGGCGCATCGTG +
Preference number: 5 (lower is better)
Translates to: DPSPHWAELMSRKGC*STEVLGSVMWGRIV
Trigger: CACGATGCGCCCCCACATCACCGAACCCAGAACCTCAGTGCTTCAGCACCCCTTCCTCGACATGAGCTCCGCCCAATGAGGAGAAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000566893.5
ENST00000569766.5
CDS GCA 90 bp GCCAAAGACGAGTTTGAAGTCGAGCTCGTCGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGCCCAGGGTGCTGCAGCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AKDEFEVELVVGATV*SSHRRGPGCCSSSS
Trigger: TGAGGAGGAGCTGCAGCACCCTGGGCCACGCCGATGACTACTGCAAACTGTGGCGCCCACGACGAGCTCGACTTCAAACTCGTCTTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346183.8
ENST00000349223.9
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS TCA 90 bp TCCTCATTGGGCGGAGCTCATGTCGAGGAAGGGGTGCTGAAGCACTaGGGTTCTGGGTTCGGTGATGTGGGGGCGCATCGTGTTACTCCT +
Preference number: 5 (lower is better)
Translates to: SSLGGAHVEEGVLKH*GSGFGDVGAHRVTP
Trigger: AGGAGTAACACGATGCGCCCCCACATCACCGAACCCAGAACCTCAGTGCTTCAGCACCCCTTCCTCGACATGAGCTCCGCCCAATGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000566893.5
ENST00000569766.5
CDS-3UTR CAA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACTGGCCAGGCTTTGGTTaGCTCCAGGTAAAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNWPGFG*LQVKGE
Trigger: TTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCA...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAGGGCACTCAAAGGGTTaGGGACCACCTAATGGGCTA +
Preference number: 5 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRGHSKG*GPPNGL
Trigger: TAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCCC...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTAGGGGGATGTGGGCCTaGATGAGGGTCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTRGMWA*MRVLRL
Trigger: CAGCCTCAGGACCCTCATCAAGGCCCACATCCCCCT...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAAGGGGGATGTGGGCCTaGATGAGGGTCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QVTCKSSTSETREPAAFTRGMWA*MRVLRL
Trigger: CAGCCTCAGGACCCTCATCAAGGCCCACATCCCCCT...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCACCATGGACAGAAGCATaGAGCCACGTATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: AGCSFCWALPWTPVSPAAPWTEA*SHVSSV
Trigger: GACAGAAGATACGTGGCTCAATGCTTCTGTCCATGG...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAAQGHHL*KSPGLV
Trigger: CACCAGCCCGGGAGACTTCAATAGATGATGGCCTTG...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGCAAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: AGCSFCWALPWTPVSPAANMRKF*SRPLGA
Trigger: TGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...TGCTGCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGGGCACAAAGGGTATaGCAAGGGGAACTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSRAQRV*QGELLQ
Trigger: TTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCT...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGAGGGGGATGTGGGCCTaGATGAGGGTCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLRGMWA*MRVLRL
Trigger: CAGCCTCAGGACCCTCATCAAGGCCCACATCCCCCT...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPNMRKF*SRPLGA
Trigger: TGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACATGAACAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GWPWVGIVYTRAAAPHMNNNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...GTTCATGTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTCTGCTGGGCCCTGCCTaGGACACCAGTCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPLLGPA*DTSLTS
Trigger: GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAG...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CAAGTCTGGCCATTTCTCTGGAATGTCAACCGAGAGGCCAACTTCTTGCCCCTCCGAGAGGCCAACTTCTaGCCCCTCCAAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QVWPFLWNVNREANFLPLREANF*PLQRKL
Trigger: CAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCG...GAGGGGCAAGAAGTTGGCCTCTCGGTTGACATTCCAGAGAAATGGCCAGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGGGGGATGTGGGCCTaGATGAGGGTCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPRGMWA*MRVLRL
Trigger: CAGCCTCAGGACCCTCATCAAGGCCCACATCCCCCT...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCACCATGGACAGAAGCATaGAGCCACGTATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRAPWTEA*SHVSSV
Trigger: GACAGAAGATACGTGGCTCAATGCTTCTGTCCATGG...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ACCAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TRSPAKAAPRKQESLLHSQGHHL*KSPGLV
Trigger: CACCAGCCCGGGAGACTTCAATAGATGATGGCCTTG...TGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCCTGCTAGACAAGTTGGTCCATaGTACACAACATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: PKSRDSGLGRGACLLTPARQVGP*YTTLVC
Trigger: GCAAACTAATGTTGTGTACAATGGACCAACTTGTCT...AGCAGGGGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 5 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGACTCGGGTACCTCCTTaGGTAGACAGCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGTRVPP*VDSRLQ
Trigger: CTGCAGCCTGCTGTCTACCAAAGGAGGTACCCGAGT...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTCTAGCACGTGCCCAGTaGCTCAGTGCTGCTAGTAGA +
Preference number: 5 (lower is better)
Translates to: GCLWCGGSGYHFWMCSEPLARAQ*LSAASR
Trigger: TCTACTAGCAGCACTGAGCAACTGGGCACGTGCTAG...AGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS TCA 90 bp CAAGGAGATTGCCTGGGTGATAATGAGTGTCCAAGTCCATACTGTTaGTGCCAAGTTTCTTCTCCAGGGCAGCCCCCTGGAGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: QGDCLGDNECPSPYC*CQVSSPGQPPGEPP
Trigger: TGGTGGCTCTCCAGGGGGCTGCCCTGGAGAAGAAACTTGGCATCAACAGTATGGACTTGGACACTCATTATCACCCAGGCAATCTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS-3UTR CAA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAGGGCACTCAAAGGGTTaGGGACCACCTAATGGGCTA +
Preference number: 5 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLGHSKG*GPPNGL
Trigger: TAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCCC...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCATGGCCAGGCTTTGGTTaGCTCCAGGTAAAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSWPGFG*LQVKGE
Trigger: TTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCA...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GATCTTCCTAAATCCAGGGACTCAGGACTCGGGAGGGGAGCCTGCCTGCTCACCCATGGATGCATATGTTaGTGGGATGGAGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: DLPKSRDSGLGRGACLLTHGCIC*WDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATG...GGTGAGCAGGCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCAGAAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: GGGMLLSPQMVGPTPGPRRCWCD*KRLVYN
Trigger: ATTGTACACCAGCCTTTTCAAGTCACACCAACACCT...TCTGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GACAGCAGGCTGCAGTTTCTGCTGGGCCCTGCCTTGGACACCAGTCTCACCAGCAGACAAGTTGGTCCATaGTACACAACATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: DSRLQFLLGPALDTSLTSRQVGP*YTTLVC
Trigger: GCAAACTAATGTTGTGTACAATGGACCAACTTGTCT...GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAGAAACTGCAGCCTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 5 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGACTGAAGGCTGCAGAGTaGGAAACCCAAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRLKAAE*ETQGPR
Trigger: CCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAG...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACAAGCACCAGGGTGTCTTaGGTGTGGAGGGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: LQSPGITASGLQPAHCLTSTRVS*VWRVRL
Trigger: TAACCTGACCCTCCACACCAAAGACACCCTGGTGCT...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGGGCACTCAAAGGGTTaGGGACCACCTAATGGGCTA +
Preference number: 5 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLGHSKG*GPPNGL
Trigger: TAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCCC...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCACAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: CKSSTSETREPAAFTLKAQGHHL*KSPGLV
Trigger: CACCAGCCCGGGAGACTTCAATAGATGATGGCCTTG...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCACCACACAGACAAGTTGGTCCATaGTACACAACATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: DNGWPWVGIVYTRAAAPHRQVGP*YTTLVC
Trigger: GCAAACTAATGTTGTGTACAATGGACCAACTTGTCT...GTGTGGTGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 5 (lower is better)
Translates to: CLWCGGSGYHFWMCSEPSAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTCTGAAGGCTGCAGAGTaGGAAACCCAAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: CLWCGGSGYHFWMCSEPSLKAAE*ETQGPR
Trigger: CCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAG...AGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATCCATTCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGCTGAAGGCTGCAGAGTaGGAAACCCAAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: IHSEYQKQGFTARPRRGLLKAAE*ETQGPR
Trigger: CCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAG...CAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCGCTGCTCCTGTTCTTTaGCCAAATCTACCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSAAPVL*PNLPKA
Trigger: GGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGC...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCGCTGCTCCTGTTCTTTaGCCAAATCTACCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFAAPVL*PNLPKA
Trigger: GGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGC...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAAGCACCAGGGTGTCTTaGGTGTGGAGGGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: SEYQKQGFTARPRRGLVISTRVS*VWRVRL
Trigger: TAACCTGACCCTCCACACCAAAGACACCCTGGTGCT...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCACGAGAGGCCAACTTCTaGCCCCTCCAAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: KGIARGTLAITSCEAATPREANF*PLQRKL
Trigger: CAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCG...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAAGGGCACAAAGGGTATaGCAAGGGGAACTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: QVTCKSSTSETREPAAFTRAQRV*QGELLQ
Trigger: TTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCT...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCAGCAGCAAGAAGGCATCAAAATTaGGTGCATAGCAACTCTGGA +
Preference number: 5 (lower is better)
Translates to: SGDNGWPWVGIVYTRAAARRHQN*VHSNSG
Trigger: TCCAGAGTTGCTATGCACCAAATTTTGATGCCTTCT...TGCTGCTGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTACCATGGACAGAAGCATaGAGCCACGTATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: GGGHKAAVSTVRAHQIFLPWTEA*SHVSSV
Trigger: GACAGAAGATACGTGGCTCAATGCTTCTGTCCATGG...TAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCACAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPQGHHL*KSPGLV
Trigger: CACCAGCCCGGGAGACTTCAATAGATGATGGCCTTG...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTCAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLQGHHL*KSPGLV
Trigger: CACCAGCCCGGGAGACTTCAATAGATGATGGCCTTG...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCATGGCCAGGCTTTGGTTaGCTCCAGGTAAAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: CKSSTSETREPAAFTLKAWPGFG*LQVKGE
Trigger: TTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCA...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp AATATGAGGAAGTTCTTGAGCAGACCGCTGGGAGCACTCAACGGGTATAGAGGCAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: NMRKFLSRPLGALNGYRGNMRKF*SRPLGA
Trigger: TGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...GCCTCTATACCCGTTGAGTGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp AAGAGGTCTGGTGATAATGGCTGGCCCTGGGTGGGGATAGTTTACACCCGGGCACTCTTCTCTGTGTTCTaGCTTCATCAAAACTGGTGT +
Preference number: 5 (lower is better)
Translates to: KRSGDNGWPWVGIVYTRALFSVF*LHQNWC
Trigger: ACACCAGTTTTGATGAAGCAAGAACACAGAGAAGAG...TGCCCGGGTGTAAACTATCCCCACCCAGGGCCAGCCATTATCACCAGACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GAGGTGGAGGAATGCTACTTTCCCCACAAATGGTGGGTCCCACTCCTGGCCCCACTAAACCAGAAAGAGTaGCATCCTGCTGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: EVEECYFPHKWWVPLLAPLNQKE*HPAETK
Trigger: TTTTGTTTCAGCAGGATGCAACTCTTTCTGGTTTAG...TGGGGCCAGGAGTGGGACCCACCATTTGTGGGGAAAGTAGCATTCCTCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp AAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCAGCTACACCAGCTCACCCCTGCTCCTaGGGAAACAGAAATCTGGGA +
Preference number: 5 (lower is better)
Translates to: KGIARGTLAITSCEAATPAHPCS*GNRNLG
Trigger: TCCCAGATTTCTGTTTCCCAAGGAGCAGGGGTGAGC...TGGTGTAGCTGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACAGGCAGATGCTTCTGTTaGGAAAAGGTTCTACGACCA +
Preference number: 5 (lower is better)
Translates to: QVTCKSSTSETREPAAFTGRCFC*EKVLRP
Trigger: TGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCC...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAAACTCGGGTACCTCCTTaGGTAGACAGCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: HVSLCISSKQKATHSIPQTRVPP*VDSRLQ
Trigger: CTGCAGCCTGCTGTCTACCAAAGGAGGTACCCGAGT...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCCTAGCACGTGCCCAGTaGCTCAGTGCTGCTAGTAGA +
Preference number: 5 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCLARAQ*LSAASR
Trigger: TCTACTAGCAGCACTGAGCAACTGGGCACGTGCTAG...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGCCATGGACAGAAGCATaGAGCCACGTATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLPWTEA*SHVSSV
Trigger: GACAGAAGATACGTGGCTCAATGCTTCTGTCCATGG...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGEGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCGCTGCTCCTGTTCTTTaGCCAAATCTACCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: APWETEIWDMSLPIISFTAAPVL*PNLPKA
Trigger: GGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGC...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR CAA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCTTCCTCATCACTTGCTaGGCCTCCTTCTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPFLITC*ASFFLP
Trigger: AGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAA...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS GCA 90 bp CTTGGATTCCTTCACAACAGGATGTCCCCCAGTAGATGCTTTTACTaGCCCTCGGCTACCTTCAGTTTCATAATGGGCTCGATGATGAGT +
Preference number: 5 (lower is better)
Translates to: LGFLHNRMSPSRCFY*PSATFSFIMGSMMS
Trigger: ACTCATCATCGAGCCCATTATGAAACTGAAGGTAGCCGAGGGGCAGTAAAAGCATCTACTGGGGGACATCCTGTTGTGAAGGAATCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565750.2
CDS-3UTR CAA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAGGGCACTCAAAGGGTTaGGGACCACCTAATGGGCTA +
Preference number: 5 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPGHSKG*GPPNGL
Trigger: TAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCCC...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAAGGCTGGAAGTTTTCCTTGTTTaGAGAGGGATGTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: EGQVITSGCAQSLLGKRLEVFLV*RGMSVS
Trigger: AGAGACTGACATCCCTCTCAAAACAAGGAAAACTTC...CAGCCTTTTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPNMRKF*SRPLGA
Trigger: TGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPNMRKF*SRPLGA
Trigger: TGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTGACAATGTGAGCCCCTaGACATTTTTCCCTGATTAT +
Preference number: 5 (lower is better)
Translates to: GHLQKQHLGNKRACCIHTDNVSP*TFFPDY
Trigger: ATAATCAGGGAAAAATGTCAAGGGGCTCACATTGTC...AGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CAGGTCACCTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACATGGATGCATATGTTaGTGGGATGGAGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: QVTCKSSTSETREPAAFTHGCIC*WDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATG...TGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAGGTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GTTGGTGGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VGGGHKAAVSTVRAHQIFNNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...GAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGTCGCCAAAGACGAGTTaGAAGTCGAGCTCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: PESFQAINRMADKPSMPVSPKTS*KSSSSW
Trigger: CCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGA...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTTCGCCAAAGACGAGTTaGAAGTCGAGCTCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKISPKTS*KSSSSW
Trigger: CCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGA...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACAGAAGTTTTCCTTGTTTaGAGAGGGATGTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LQSPGITASGLQPAHCLTEVFLV*RGMSVS
Trigger: AGAGACTGACATCCCTCTCAAAACAAGGAAAACTTC...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCATGGCCAGGCTTTGGTTaGCTCCAGGTAAAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPWPGFG*LQVKGE
Trigger: TTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCA...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: LPKPLRLASKVTEQPKADGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CCTGAAGGCTGCAGAGTTGGAAACCCAAGGTCCAAGGAGAGAAACATGCTGAGAGACAATGTGAGCCCCTaGACATTTTTCCCTGATTAT +
Preference number: 5 (lower is better)
Translates to: PEGCRVGNPRSKERNMLRDNVSP*TFFPDY
Trigger: ATAATCAGGGAAAAATGTCAAGGGGCTCACATTGTC...TCTCAGCATGTTTCTCTCCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CTGCAGTCTCCTGGAATAACAGCATCAGGCCTTCAACCAGCACACTGTCTCACACTCTTCTCTGTGTTCTaGCTTCATCAAAACTGGTGT +
Preference number: 5 (lower is better)
Translates to: LQSPGITASGLQPAHCLTLFSVF*LHQNWC
Trigger: ACACCAGTTTTGATGAAGCAAGAACACAGAGAAGAG...TGTGAGACAGTGTGCTGGTTGAAGGCCTGATGCTGTTATTCCAGGAGACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGTACACAACATTAGTTaGCATAGGCTGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSVHNIS*HRLIGR
Trigger: TCTTCCTATCAGCCTATGCAAACTAATGTTGTGTAC...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCAGAGCCTTCTGGGGAAAGACAAGTTGGTCCATaGTACACAACATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: WCGGSGYHFWMCSEPSGERQVGP*YTTLVC
Trigger: GCAAACTAATGTTGTGTACAATGGACCAACTTGTCT...TTCCCCAGAAGGCTCTGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GCACCAGGGTGTCTTTGGTGTGGAGGGTCAGGTTATCACTTCTGGATGTGCTCACTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGG +
Preference number: 5 (lower is better)
Translates to: APGCLWCGGSGYHFWMCSLLSLN*KNEMVW
Trigger: CCATACCATTTCATTCTTCAAATTCAGGCTCAACAG...TGAGCACATCCAGAAGTGATAACCTGACCCTCCACACCAAAGACACCCTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CTGCCTAAACCACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATTACTTTGTGCTTGAGTaGAGTGCTGTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: LPKPLRLASKVTEQPKADYFVLE*SAVQNA
Trigger: TGCATTCTGGACAGCACTCAACTCAAGCACAAAGTA...ATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGTGGTTTAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCCTGCTGGGCCCTGCCTaGGACACCAGTCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGLLGPA*DTSLTS
Trigger: GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAG...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATACTGCTGGGCCCTGCCTaGGACACCAGTCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: ARLPRKLPKGYALECLFILLGPA*DTSLTS
Trigger: GCTGGTGAGACTGGTGTCCAAGGCAGGGCCCAGCAG...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGCTAGCACGTGCCCAGTaGCTCAGTGCTGCTAGTAGA +
Preference number: 5 (lower is better)
Translates to: PESFQAINRMADKPSMPVLARAQ*LSAASR
Trigger: TCTACTAGCAGCACTGAGCAACTGGGCACGTGCTAG...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAGGGCACTCAAAGGGTTaGGGACCACCTAATGGGCTA +
Preference number: 5 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQGHSKG*GPPNGL
Trigger: TAGCCCATTAGGTGGTCCCAAACCCTTTGAGTGCCC...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGAAGTTTTCCTTGTTTaGAGAGGGATGTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: CKSSTSETREPAAFTLKAEVFLV*RGMSVS
Trigger: AGAGACTGACATCCCTCTCAAAACAAGGAAAACTTC...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGAATATGAGGAAGTTCTaGAGCAGACCGCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LKPSHLESCIFSAHADVLNMRKF*SRPLGA
Trigger: TGCTCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPRCWCD*KRLVYN
Trigger: ATTGTACACCAGCCTTTTCAAGTCACACCAACACCT...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp GTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: VSKSDVRIFLITCLASFFRCWCD*KRLVYN
Trigger: ATTGTACACCAGCCTTTTCAAGTCACACCAACACCT...GAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp ATGAACGTCTTCAGGACACATGCTGACTTTCTGAGGCATAGGTGTGGGCTTGGGCTAAACCAGAAAGAGTaGCATCCTGCTGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: MNVFRTHADFLRHRCGLGLNQKE*HPAETK
Trigger: TTTTGTTTCAGCAGGATGCAACTCTTTCTGGTTTAG...CCCAAGCCCACACCTATGCCTCAGAAAGTCAGCATGTGTCCTGAAGACGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPNNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTTACTTTGTGCTTGAGTaGAGTGCTGTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPYFVLE*SAVQNA
Trigger: TGCATTCTGGACAGCACTCAACTCAAGCACAAAGTA...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp ACTGAGACTGGCTTCAAAGGTCACAGAACAGCCAAAGGCAGATGCTTCTGTTTGTACTTTGTGCTTGAGTaGAGTGCTGTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: TETGFKGHRTAKGRCFCLYFVLE*SAVQNA
Trigger: TGCATTCTGGACAGCACTCAACTCAAGCACAAAGTA...CAAACAGAAGCATCTGCCTTTGGCTGTTCTGTGACCTTTGAAGCCAGTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GGTGGACACAAGGCTGCAGTAAGCACTGTTAGAGCCCATCAGATCTTCCTAAATTACTTTGTGCTTGAGTaGAGTGCTGTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: GGHKAAVSTVRAHQIFLNYFVLE*SAVQNA
Trigger: TGCATTCTGGACAGCACTCAACTCAAGCACAAAGTA...ATTTAGGAAGATCTGATGGGCTCTAACAGTGCTTACTGCAGCCTTGTGTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp AAAGCGATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTACTTTGTGCTTGAGTaGAGTGCTGTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: KAMYVSSSSLAWPPSSSLYFVLE*SAVQNA
Trigger: TGCATTCTGGACAGCACTCAACTCAAGCACAAAGTA...AAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACATCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp AGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCATCAAAATTTGGTGCGAGAGGCCAACTTCTaGCCCCTCCAAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SISSATGIKVFRRHQNLVREANF*PLQRKL
Trigger: CAGCTTCCTTTGGAGGGGCAAGAAGTTGGCCTCTCG...CACCAAATTTTGATGCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TCTGAATACCAAAAACAGGGCTTCACAGCCAGGCCCAGAAGAGGTCTGGTGATAAGAAGGCATCAAAATTaGGTGCATAGCAACTCTGGA +
Preference number: 5 (lower is better)
Translates to: SEYQKQGFTARPRRGLVIRRHQN*VHSNSG
Trigger: TCCAGAGTTGCTATGCACCAAATTTTGATGCCTTCT...TATCACCAGACCTCTTCTGGGCCTGGCTGTGAAGCCCTGTTTTTGGTATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS TCA 90 bp CTTCCTCCCTTTTTCCCATCCCTTCCTCGGGCTAAGACTCAGTCATaGCTAAGTGGTTTCTCTGCTTTGACAAAACCATCATCTAAAGTG +
Preference number: 5 (lower is better)
Translates to: LPPFFPSLPRAKTQS*LSGFSALTKPSSKV
Trigger: CACTTTAGATGATGGTTTTGTCAAAGCAGAGAAACCACTTAGTCATGACTGAGTCTTAGCCCGAGGAAGGGATGGGAAAAAGGGAGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAGAAGTTTTCCTTGTTTaGAGAGGGATGTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPEVFLV*RGMSVS
Trigger: AGAGACTGACATCCCTCTCAAAACAAGGAAAACTTC...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCGAAGTTTTCCTTGTTTaGAGAGGGATGTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPEVFLV*RGMSVS
Trigger: AGAGACTGACATCCCTCTCAAAACAAGGAAAACTTC...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TATGAGGAAGTTCTTGAGCAGACCGCTGGGCTGGCTGACATATTATTTTCAGGAGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: YEEVLEQTAGLADILFSGGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...TCCTGAAAATAATATGTCAGCCAGCCCAGCGGTCTGCTCAAGAACTTCCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568466.6
CDS-3UTR CAA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCGACAATGTGAGCCCCTaGACATTTTTCCCTGATTAT +
Preference number: 5 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCDNVSP*TFFPDY
Trigger: ATAATCAGGGAAAAATGTCAAGGGGCTCACATTGTC...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGACAATGTGAGCCCCTaGACATTTTTCCCTGATTAT +
Preference number: 5 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPDNVSP*TFFPDY
Trigger: ATAATCAGGGAAAAATGTCAAGGGGCTCACATTGTC...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp CCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCTCTTCTCTGTGTTCTaGCTTCATCAAAACTGGTGT +
Preference number: 5 (lower is better)
Translates to: PKLKQPMLLLFFCQIYPRLFSVF*LHQNWC
Trigger: ACACCAGTTTTGATGAAGCAAGAACACAGAGAAGAG...CCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCACATGGATGCATATGTTaGTGGGATGGAGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPHGCIC*WDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATG...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCAGTACACAACATTAGTTaGCATAGGCTGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: CKSSTSETREPAAFTLKAVHNIS*HRLIGR
Trigger: TCTTCCTATCAGCCTATGCAAACTAATGTTGTGTAC...TGCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp AGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTGCTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGG +
Preference number: 5 (lower is better)
Translates to: SSNSLCCSCSFAKSTQGLLLSLN*KNEMVW
Trigger: CCATACCATTTCATTCTTCAAATTCAGGCTCAACAG...CAGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CAGGGTCCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAGAAGGCATCAAAATTaGGTGCATAGCAACTCTGGA +
Preference number: 5 (lower is better)
Translates to: QGPEGKSNFNMEPVWRDCRRHQN*VHSNSG
Trigger: TCCAGAGTTGCTATGCACCAAATTTTGATGCCTTCT...GCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGGACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CTGCAAAAGCAGCACCTCGGAAACAAGAGAGCCTGCTGCATTCACACTCAAAGCCTAGTAGAAATTGATTaGCATAGTCCAATGGATGTG +
Preference number: 5 (lower is better)
Translates to: LQKQHLGNKRACCIHTQSLVEID*HSPMDV
Trigger: CACATCCATTGGACTATGCAAATCAATTTCTACTAG...GCTTTGAGTGTGAATGCAGCAGGCTCTCTTGTTTCCGAGGTGCTGCTTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TGCCAATATCAGTTTCTCCTTTTCGAAGTTCTATATCTGAATTGCGGAGTTTCATCGCCAAAGACGAGTTaGAAGTCGAGCTCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: CQYQFLLFEVLYLNCGVSSPKTS*KSSSSW
Trigger: CCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGA...TGAAACTCCGCAATTCAGATATAGAACTTCGAAAAGGAGAAACTGATATTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539828.6
ENST00000561714.5
CDS-3UTR CAA 90 bp GAAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGTCGCCAAAGACGAGTTaGAAGTCGAGCTCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: EEVEFPELLYWQLLSLGLSPKTS*KSSSSW
Trigger: CCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGA...CAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CAA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAACCATGGACAGAAGCATaGAGCCACGTATCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQPWTEA*SHVSSV
Trigger: GACAGAAGATACGTGGCTCAATGCTTCTGTCCATGG...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTGGCCAGGCTTTGGTTaGCTCCAGGTAAAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHWPGFG*LQVKGE
Trigger: TTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCA...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GCTCCTTGGGAAACAGAAATCTGGGACATGTCTCTCCCAATTATCTCGTTCACCCTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: APWETEIWDMSLPIISFTLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...GGTGAACGAGATAATTGGGAGAGACATGTCCCAGATTTCTGTTTCCCAAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329524.8
ENST00000562926.5
CDS-3UTR CAA 90 bp TTTCCACTGGGCTGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCCTCTTCTCTGTGTTCTaGCTTCATCAAAACTGGTGT +
Preference number: 5 (lower is better)
Translates to: FPLGCGMCTRNTSRTLVFLFSVF*LHQNWC
Trigger: ACACCAGTTTTGATGAAGCAAGAACACAGAGAAGAG...GAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACAGCCCAGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp TCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAGTACACAACATTAGTTaGCATAGGCTGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SPKLKQPMLLLFFCQIYPVHNIS*HRLIGR
Trigger: TCTTCCTATCAGCCTATGCAAACTAATGTTGTGTAC...TGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp TGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAAGACAAGTTGGTCCATaGTACACAACATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: CTYLPHHLLGLLLPPFFPRQVGP*YTTLVC
Trigger: GCAAACTAATGTTGTGTACAATGGACCAACTTGTCT...TGGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp AAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCAAATCTACCCAAGGCCTCTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGG +
Preference number: 5 (lower is better)
Translates to: KLKQPMLLLFFCQIYPRPLLSLN*KNEMVW
Trigger: CCATACCATTTCATTCTTCAAATTCAGGCTCAACAG...AGGCCTTGGGTAGATTTGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCCTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGG +
Preference number: 5 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPLLSLN*KNEMVW
Trigger: CCATACCATTTCATTCTTCAAATTCAGGCTCAACAG...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GTGGTTGACAGCCAAGATTCACTAAACCAGAAAGAGTTGCATCCTGCTGAAACATACTTTGTGCTTGAGTaGAGTGCTGTCCAGAATGCA +
Preference number: 5 (lower is better)
Translates to: VVDSQDSLNQKELHPAETYFVLE*SAVQNA
Trigger: TGCATTCTGGACAGCACTCAACTCAAGCACAAAGTA...TGTTTCAGCAGGATGCAACTCTTTCTGGTTTAGTGAATCTTGGCTGTCAACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGGGCAGATGCTTCTGTTaGGAAAAGGTTCTACGACCA +
Preference number: 5 (lower is better)
Translates to: PESFQAINRMADKPSMPVGRCFC*EKVLRP
Trigger: TGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCC...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GAGGGCACAAAGGGTATTGCAAGGGGAACTCTTGCAATAACCTCATGTGAGGCACTAGTAGAAATTGATTaGCATAGTCCAATGGATGTG +
Preference number: 5 (lower is better)
Translates to: EGTKGIARGTLAITSCEALVEID*HSPMDV
Trigger: CACATCCATTGGACTATGCAAATCAATTTCTACTAG...TGCCTCACATGAGGTTATTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TCCAGTCACAACCATTTCATGACCTCCATTTACAGAACAACTGTTGATACTGTAAATATGAGGAAGTTCTaGAGCAGACCGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSHNHFMTSIYRTTVDTVNMRKF*SRPLGW
Trigger: CCAGCCCAGCGGTCTGCTCAAGAACTTCCTCATATT...TACAGTATCAACAGTTGTTCTGTAAATGGAGGTCATGAAATGGTTGTGACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568466.6
CDS GCA 90 bp AGTGGTTTCTCTGCTTTGACAAAACCATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCTTCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: SGFSALTKPSSKVMS*RPMVAKLGSRSSGS
Trigger: TGAACCAGAAGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGGTTTTGTCAAAGCAGAGAAACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATATCGCCAAAGACGAGTTaGAAGTCGAGCTCGTCGTGG +
Preference number: 5 (lower is better)
Translates to: ARLPRKLPKGYALECLFISPKTS*KSSSSW
Trigger: CCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGA...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp CATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGCTACCCATTCCATTCCTCAACTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: HVSLCISSKQKATHSIPQLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...TTGAGGAATGGAATGGGTAGCCTTCTGCTTACTGGAGATGCACAGAGAAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TTTCCACTGGGCTGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCCTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: FPLGCGMCTRNTSRTLVFLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...GAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACAGCCCAGTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp CCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGCCAGTGAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: PESFQAINRMADKPSMPVRCWCD*KRLVYN
Trigger: ATTGTACACCAGCCTTTTCAAGTCACACCAACACCT...CACTGGCATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATGAGGTCACCATGGATGCATATGTTTGTGGGATGGAGCAAATCAAACTTCTCTAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: MRSPWMHMFVGWSKSNFSRCWCD*KRLVYN
Trigger: ATTGTACACCAGCCTTTTCAAGTCACACCAACACCT...AGAGAAGTTTGATTTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp GGTAGGCCAGAATCATTTCAGGCTATAAATAGAATGGCAGATAAGCCTTCCATGAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GRPESFQAINRMADKPSMNNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...CATGGAAGGCTTATCTGCCATTCTATTTATAGCCTGAAATGATTCTGGCCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATACTGAAGGCTGCAGAGTaGGAAACCCAAGGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: ARLPRKLPKGYALECLFILKAAE*ETQGPR
Trigger: CCTTGGACCTTGGGTTTCCAACTCTGCAGCCTTCAG...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp ATGTACGTATCTTCCTCATCACTTGCTTGGCCTCCTTCTTCCTCCCTTTTTCCCAGTGGTTTCTCTGCTTaGACAAAACCATCATCTAAA +
Preference number: 5 (lower is better)
Translates to: MYVSSSSLAWPPSSSLFPSGFSA*TKPSSK
Trigger: TTTAGATGATGGTTTTGTCAAAGCAGAGAAACCACT...GGGAAAAAGGGAGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATACGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGCTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: LKPSHLESCIFSAHADVLLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCACTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp CCTGAGGGAAAAAGCAATTTCAACATGGAGCCAGTATGGAGAGATTGCAAGATTCTCTTCTCTGTGTTCTaGCTTCATCAAAACTGGTGT +
Preference number: 5 (lower is better)
Translates to: PEGKSNFNMEPVWRDCKILFSVF*LHQNWC
Trigger: ACACCAGTTTTGATGAAGCAAGAACACAGAGAAGAG...AATCTTGCAATCTCTCCATACTGGCTCCATGTTGAAATTGCTTTTTCCCTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TTTTTAAAGCTGTTTTCAGCCATGTTTCTCTGTGCATCTCCAGTAAGCAGAAGGAGGTGTTGGTGTGACTaGAAAAGGCTGGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: FLKLFSAMFLCASPVSRRRCWCD*KRLVYN
Trigger: ATTGTACACCAGCCTTTTCAAGTCACACCAACACCT...CCTTCTGCTTACTGGAGATGCACAGAGAAACATGGCTGAAAACAGCTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TTAAAACCTTCCCATCTGGAGTCCTGTATTTTCTCTGCCCATGCTGATGTACTGCTAAACCAGAAAGAGTaGCATCCTGCTGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: LKPSHLESCIFSAHADVLLNQKE*HPAETK
Trigger: TTTTGTTTCAGCAGGATGCAACTCTTTCTGGTTTAG...CAGTACATCAGCATGGGCAGAGAAAATACAGGACTCCAGATGGGAAGGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAAGTTCATTTCCCCAAAGCTCAAACAGCCTATGCTGCTCCTGTTCTTTTGCCACTAAACCAGAAAGAGTaGCATCCTGCTGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: KVHFPKAQTAYAAPVLLPLNQKE*HPAETK
Trigger: TTTTGTTTCAGCAGGATGCAACTCTTTCTGGTTTAG...TGGCAAAAGAACAGGAGCAGCATAGGCTGTTTGAGCTTTGGGGAAATGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000562926.5
CDS-3UTR CAA 90 bp ATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGGCAATTATTATCTCTaGGCTTGCAGTAGCGACTGT +
Preference number: 5 (lower is better)
Translates to: ISRTFVLAIIISWLAVATGNYYL*ACSSDC
Trigger: ACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCC...AGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
CDS-3UTR CAA 90 bp TGTGGGATGTGTACACGAAACACAAGTCGTACTCTAGTATTCTTTCTGCCAATAGACAATGTGAGCCCCTaGACATTTTTCCCTGATTAT +
Preference number: 5 (lower is better)
Translates to: CGMCTRNTSRTLVFFLPIDNVSP*TFFPDY
Trigger: ATAATCAGGGAAAAATGTCAAGGGGCTCACATTGTC...TATTGGCAGAAAGAATACTAGAGTACGACTTGTGTTTCGTGTACACATCCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp ATGAGGTCACCATGGATGCATATGTTTGTGGGATGGAGCAAATCAAACTTCTCTAGACAAGTTGGTCCATaGTACACAACATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: MRSPWMHMFVGWSKSNFSRQVGP*YTTLVC
Trigger: GCAAACTAATGTTGTGTACAATGGACCAACTTGTCT...AGAGAAGTTTGATTTGCTCCATCCCACAAACATATGCATCCATGGTGACCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp TTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGCGACTGTCTTCCCAGTCTGTTGAGCCTGAATTaGAAGAATGAAATGGTATGG +
Preference number: 5 (lower is better)
Translates to: FCTGNYYLLACSSDCLPSLLSLN*KNEMVW
Trigger: CCATACCATTTCATTCTTCAAATTCAGGCTCAACAG...ACTGGGAAGACAGTCGCTACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCAGGGCACAAAGGGTATaGCAAGGGGAACTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGRAQRV*QGELLQ
Trigger: TTGCAAGAGTTCCCCTTGCAATACCCTTTGTGCCCT...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGTATCTTCCTCATCACTaGCTTGGCCTCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLYLPHH*LGLLLP
Trigger: AGGAAGAAGGAGGCCAAGCAAGTGATGAGGAAGATA...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp AGTGTAGCTAGGTATGGCCCATGCAATTCGTTTTCTTCAATGAAATGTGAGCAAGTACACAACATTAGTTaGCATAGGCTGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SVARYGPCNSFSSMKCEQVHNIS*HRLIGR
Trigger: TCTTCCTATCAGCCTATGCAAACTAATGTTGTGTAC...TTGCTCACATTTCATTGAAGAAAACGAATTGCATGGGCCATACCTAGCTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAGGCAGATGCTTCTGTTaGGAAAAGGTTCTACGACCA +
Preference number: 5 (lower is better)
Translates to: ARLPRKLPKGYALECLFIGRCFC*EKVLRP
Trigger: TGGTCGTAGAACCTTTTCCAAACAGAAGCATCTGCC...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS TCA 90 bp CTCAGATATCTTCCTGCTGGGACTGGCCAAAACGTAGGTCTCAACTaGAGCAAGTCAAAATTATTACTGGTAAACAAATCATCATCTAAA +
Preference number: 5 (lower is better)
Translates to: LRYLPAGTGQNVGLN*SKSKLLLVNKSSSK
Trigger: TTTAGATGATGATTTGTTTACCAGTAATAATTTTGACTTGCTTCAGTTGAGACCTACGTTTTGGCCAGTCCCAGCAGGAAGATATCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS-3UTR CAA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTCTTCTCTGTGTTCTaGCTTCATCAAAACTGGTGT +
Preference number: 5 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLLFSVF*LHQNWC
Trigger: ACACCAGTTTTGATGAAGCAAGAACACAGAGAAGAG...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GCTATGCTCTGGAATGTCTTTTTATATTCCAACACTTCAATGATGGAATGGTCTCATGGATGCATATGTTaGTGGGATGGAGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: AMLWNVFLYSNTSMMEWSHGCIC*WDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATG...AGACCATTCCATCATTGAAGTGTTGGAATATAAAAAGACATTCCAGAGCATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTCATGGATGCATATGTTaGTGGGATGGAGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: KWNFQNFCTGNYYLLACSHGCIC*WDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATG...ACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp GAGATTGCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTGTACACAACATTAGTTaGCATAGGCTGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: EIARLPRKLPKGYALECLVHNIS*HRLIGR
Trigger: TCTTCCTATCAGCCTATGCAAACTAATGTTGTGTAC...AAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGCAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TCGTTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACCTAAACCAGAAAGAGTaGCATCCTGCTGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: SFSSMKCEQKRCTYLPHHLNQKE*HPAETK
Trigger: TTTTGTTTCAGCAGGATGCAACTCTTTCTGGTTTAG...GTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp GCAAGATTACCTAGAAAGTTACCAAAAGGCTATGCTCTGGAATGTCTTTTTATAAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ARLPRKLPKGYALECLFINNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...TATAAAAAGACATTCCAGAGCATAGCCTTTTGGTAACTTTCTAGGTAATCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp TTCAGGAAGAAGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGAACAATGATATCCCATaGATTGCAGATGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: FRKKWNFQNFCTGNYYLLNNDIP*IADEAG
Trigger: CCCTGCCTCATCTGCAATCAATGGGATATCATTGTT...CAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACTTCTTCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp TTTTCTTCAATGAAATGTGAGCAAAAGCGATGTACGTATCTTCCTCATCACTTGCTGAGGTCGTCCATCTaGTCCTTTTTCAAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: FSSMKCEQKRCTYLPHHLLRSSI*SFFKKN
Trigger: ATTTTTCTTGAAAAAGGACAAGATGGACGACCTCAG...CAAGTGATGAGGAAGATACGTACATCGCTTTTGCTCACATTTCATTGAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS-3UTR CAA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCCATGGATGCATATGTTaGTGGGATGGAGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGHGCIC*WDGANQ
Trigger: TTGATTTGCTCCATCCCACAAACATATGCATCCATG...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS-3UTR CAA 90 bp AGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTAGTACACAACATTAGTTaGCATAGGCTGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SGISRTFVLAIIISWLAVVHNIS*HRLIGR
Trigger: TCTTCCTATCAGCCTATGCAAACTAATGTTGTGTAC...TACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS-3UTR CAA 90 bp AGTGGAATTTCCAGAACTTTTGTACTGGCAATTATTATCTCTTGGCTTGCAGTACTAAACCAGAAAGAGTaGCATCCTGCTGAAACAAAA +
Preference number: 5 (lower is better)
Translates to: SGISRTFVLAIIISWLAVLNQKE*HPAETK
Trigger: TTTTGTTTCAGCAGGATGCAACTCTTTCTGGTTTAG...TACTGCAAGCCAAGAGATAATAATTGCCAGTACAAAAGTTCTGGAAATTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539828.6
CDS GCA 90 bp ATGATTGATAGTAATTTCCAGGTTAATGTAGTTAAGTATCTTGAGTaGTTTCCATACACCTTCTTCTTTCCCATGGACAGTAGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: MIDSNFQVNVVKYLE*FPYTFFFPMDSRSC
Trigger: ACAGCTTCTACTGTCCATGGGAAAGAAGAAGGTGTATGGAAAGCACTCAAGATACTTAACTACATTAACCTGGAAATTACTATCAATCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565750.2
CDS-3UTR CAA 90 bp ATTTTAAATAGGAAAGCATTTCTAGTGCTACAGGCATCAAGGTATTTAGAAGGCCTAGTAGAAATTGATTaGCATAGTCCAATGGATGTG +
Preference number: 5 (lower is better)
Translates to: ILNRKAFLVLQASRYLEGLVEID*HSPMDV
Trigger: CACATCCATTGGACTATGCAAATCAATTTCTACTAG...GCCTTCTAAATACCTTGATGCCTGTAGCACTAGAAATGCTTTCCTATTTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
CDS CCA 72 bp CGGGGCCCGCGACGCCGAGCGTTCCGTTCCGAAAGCTaGCCGCGCGCCGAGCAGCACCAGGAACCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RGPRRRAFRSES*PRAEQHQEPQP
Trigger: CGGCTGCGGTTCCTGGTGCTGCTCGGCGCGCGGCCAGCTTTCGGAACGGAACGCTCGGCGTCGCGGGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346183.8
ENST00000349223.9
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS GCA 72 bp GGCAAGCGGCGGCAGCAGCTCCTCAACGCCGCTTCATaGCGGGCCGCGCGGGCCAAGAGGTCGCGACTCCAC +
Preference number: 6 (lower is better)
Translates to: GKRRQQLLNAAS*RAARAKRSRLH
Trigger: GTGGAGTCGCGACCTCTTGGCCCGCGCGGCCCGGCATGAAGCGGCGTTGAGGAGCTGCTGCCGCCGCTTGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346183.8
ENST00000349223.9
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS TCA 72 bp GCGGCGCCGGCGCCCCGTCCTCGCCAAAGACGAGTTTaGAGTCGAGCTCGTCGTGGGCGCCACAGTTTGCAG +
Preference number: 6 (lower is better)
Translates to: AAPAPRPRQRRV*SRARRGRHSLQ
Trigger: CTGCAAACTGTGGCGCCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGAGGACGGGGCGCCGGCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS TCA 72 bp ACCGAAGGAGACAGATTGCGCGACAAGTCCGGACTCTaGGCTCGCGGTCGCCGCAGGCCCACCCTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: TEGDRLRDKSGL*ARGRRRPTLCG
Trigger: CCCGCAGAGGGTGGGCCTGCGGCGACCGCGAGCTCAGAGTCCGGACTTGTCGCGCAATCTGTCTCCTTCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000569766.5
CDS CAA 72 bp GGCGGCGCCGGCGCCCCGTCCTCGCCAAAGACGAGTTaGAAGTCGAGCTCGTCGTGGGCGCCACAGTTTGCA +
Preference number: 6 (lower is better)
Translates to: GGAGAPSSPKTS*KSSSSWAPQFA
Trigger: TGCAAACTGTGGCGCCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGAGGACGGGGCGCCGGCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS GCA 72 bp CGAGCAGCACCAGGAACCGCAGCCGCCCGCCACCGGTaGCTAAGCCTCCACTGTCGGCTTAGCCAATGTTCC +
Preference number: 6 (lower is better)
Translates to: RAAPGTAAARHR*LSLHCRLSQCS
Trigger: GGAACATTGGCTAAGCCGACAGTGGAGGCTTAGGCACCGGTGGCGGGCGGCTGCGGTTCCTGGTGCTGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346183.8
ENST00000561714.5
ENST00000568466.6
ENST00000575270.5
CDS CCA 72 bp GGCAGGGACCGGACCGAGAGTCCAGCTAGGTTGGGGTaGAACCGAAGGAGACAGATTGCGCGACAAGTCCGG +
Preference number: 6 (lower is better)
Translates to: GRDRTESPARLG*NRRRQIARQVR
Trigger: CCGGACTTGTCGCGCAATCTGTCTCCTTCGGTTCCACCCCAACCTAGCTGGACTCTCGGTCCGGTCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000549350.5
ENST00000553077.5
ENST00000563319.5
ENST00000566301.5
ENST00000569766.5
CDS CAA 90 bp GCTGAGTCTCCAGAGGGCAGGGACCGGACCGAGAGTCCAGCTAGGTaGGGGTGGAACCGAAGGAGACAGATTGCGCGACAAGTCCGGACT +
Preference number: 6 (lower is better)
Translates to: AESPEGRDRTESPAR*GWNRRRQIARQVRT
Trigger: AGTCCGGACTTGTCGCGCAATCTGTCTCCTTCGGTTCCACCCCAACCTAGCTGGACTCTCGGTCCGGTCCCTGCCCTCTGGAGACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000549350.5
ENST00000553077.5
ENST00000563319.5
ENST00000566301.5
ENST00000569766.5
CDS TCA 72 bp GGCGGAGCTCATGTCGAGGAAGGGGTGCTGAAGCACTaGGGTTCTGGGTTCGGTGATGTGGGGGCGCATCGT +
Preference number: 6 (lower is better)
Translates to: GGAHVEEGVLKH*GSGFGDVGAHR
Trigger: ACGATGCGCCCCCACATCACCGAACCCAGAACCTCAGTGCTTCAGCACCCCTTCCTCGACATGAGCTCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000566893.5
ENST00000569766.5
CDS GCA 72 bp GAGTTTGAAGTCGAGCTCGTCGTGGGCGCCACAGTTTaGAGTAGTCATCGGCGTGGCCCAGGGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: EFEVELVVGATV*SSHRRGPGCCS
Trigger: GCTGCAGCACCCTGGGCCACGCCGATGACTACTGCAAACTGTGGCGCCCACGACGAGCTCGACTTCAAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS CAA 90 bp CTTCAGCACTGGAGTGCCTCCGTTTCCCACAGGGGGATGTGGGCCTaGATGAGGGTCCTGAGGCTGGCCTGGGGCTCAGCCAATTCTCAT +
Preference number: 6 (lower is better)
Translates to: LQHWSASVSHRGMWA*MRVLRLAWGSANSH
Trigger: ATGAGAATTGGCTGAGCCCCAGGCCAGCCTCAGGACCCTCATCAAGGCCCACATCCCCCTGTGGGAAACGGAGGCACTCCAGTGCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS TCA 72 bp CCTCATTGGGCGGAGCTCATGTCGAGGAAGGGGTGCTaGAGCACTGAGGTTCTGGGTTCGGTGATGTGGGGG +
Preference number: 6 (lower is better)
Translates to: PHWAELMSRKGC*STEVLGSVMWG
Trigger: CCCCCACATCACCGAACCCAGAACCTCAGTGCTTCAGCACCCCTTCCTCGACATGAGCTCCGCCCAATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000566893.5
ENST00000569766.5
CDS TCA 72 bp CAGGGCCAAGGCCTGACCCACCATGGACAGAAGCATTaGGCCACGTATCTTCTGTCACACTTCCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: QGQGLTHHGQKH*ATYLLSHFPWG
Trigger: CCCCCAGGGGAAGTGTGACAGAAGATACGTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCTTGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CCA 72 bp TCCTCGCCAAAGACGAGTTTGAAGTCGAGCTCGTCGTaGGCGCCACAGTTTGCAGTAGTCATCGGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: SSPKTSLKSSSS*APQFAVVIGVA
Trigger: GGCCACGCCGATGACTACTGCAAACTGTGGCGCCCACGACGAGCTCGACTTCAAACTCGTCTTTGGCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000539828.6
ENST00000561714.5
ENST00000562171.1
ENST00000568466.6
ENST00000575270.5
CDS CCA 72 bp GGGGTGAAAGGGACCCAGCATAACAAACTTCAGCACTaGAGTGCCTCCGTTTCCCACAGGGGGATGTGGGCC +
Preference number: 6 (lower is better)
Translates to: GVKGTQHNKLQH*SASVSHRGMWA
Trigger: GGCCCACATCCCCCTGTGGGAAACGGAGGCACTCCAGTGCTGAAGTTTGTTATGCTGGGTCCCTTTCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CAA 72 bp GCAGGGCCAAGGCCTGACCCACCATGGACAGAAGCATaGAGCCACGTATCTTCTGTCACACTTCCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AGPRPDPPWTEA*SHVSSVTLPLG
Trigger: CCCCAGGGGAAGTGTGACAGAAGATACGTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCTTGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CAA 72 bp ACCACCACCGGCCAATGCAGAAGACCCTTCTCCTCATaGGGCGGAGCTCATGTCGAGGAAGGGGTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: TTTGQCRRPFSS*GGAHVEEGVLK
Trigger: CTTCAGCACCCCTTCCTCGACATGAGCTCCGCCCAATGAGGAGAAGGGTCTTCTGCATTGGCCGGTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000566893.5
ENST00000569766.5
CDS CCA 72 bp AATGGAAAAACTGCAGGGCCAAGGCCTGACCCACCATaGACAGAAGCATTGAGCCACGTATCTTCTGTCACA +
Preference number: 6 (lower is better)
Translates to: NGKTAGPRPDPP*TEALSHVSSVT
Trigger: TGTGACAGAAGATACGTGGCTCAATGCTTCTGTCCATGGTGGGTCAGGCCTTGGCCCTGCAGTTTTTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CCA 72 bp TTCGTTATAGCCCAGGAGCTCTCGGGAATTGTAGTTTaGCCTGTATTCCCCCGGCGATTCCTTCTAAACCAG +
Preference number: 6 (lower is better)
Translates to: FVIAQELSGIVV*PVFPRRFLLNQ
Trigger: CTGGTTTAGAAGGAATCGCCGGGGGAATACAGGCCAAACTACAATTCCCGAGAGCTCCTGGGCTATAACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566893.5
CDS CCA 72 bp GGCAGGACTAGGACTAAGAGAAGACTCCCGGTAGGATaGCTCAAGAGGAAGATAGAGATGATCTCTAGAAGG +
Preference number: 6 (lower is better)
Translates to: GRTRTKRRLPVG*LKRKIEMISRR
Trigger: CCTTCTAGAGATCATCTCTATCTTCCTCTTGAGCCATCCTACCGGGAGTCTTCTCTTAGTCCTAGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CAA 72 bp TTTCGTTATAGCCCAGGAGCTCTCGGGAATTGTAGTTaGGCCTGTATTCCCCCGGCGATTCCTTCTAAACCA +
Preference number: 6 (lower is better)
Translates to: FRYSPGALGNCS*ACIPPAIPSKP
Trigger: TGGTTTAGAAGGAATCGCCGGGGGAATACAGGCCAAACTACAATTCCCGAGAGCTCCTGGGCTATAACGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566893.5
CDS TCA 72 bp CTTGTTTTGAGAGGGATGTCAGTCTCTACACAGTACTaGAATGGAAAAACTGCAGGGCCAAGGCCTGACCCA +
Preference number: 6 (lower is better)
Translates to: LVLRGMSVSTQY*NGKTAGPRPDP
Trigger: TGGGTCAGGCCTTGGCCCTGCAGTTTTTCCATTTCAGTACTGTGTAGAGACTGACATCCCTCTCAAAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS GCA 72 bp TCAGTGACACTGGATCTAGGAGAGTGGCAAGGAGATTaGCTGGGTGATAATGAGTGTCCAAGTCCATACTGT +
Preference number: 6 (lower is better)
Translates to: SVTLDLGEWQGD*LGDNECPSPYC
Trigger: ACAGTATGGACTTGGACACTCATTATCACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAGTGTCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CCA 72 bp AGCCAATTCTCATCAGTGACACTGGATCTAGGAGAGTaGCAAGGAGATTGCCTGGGTGATAATGAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SQFSSVTLDLGE*QGDCLGDNECP
Trigger: TGGACACTCATTATCACCCAGGCAATCTCCTTGCCACTCTCCTAGATCCAGTGTCACTGATGAGAATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CCA 72 bp AGTGGAGGTAATGAAGATGTGCGAAATATAGGGGTGTaGCCAGGCTTTGGTTTGCTCCAGGTAAAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: SGGNEDVRNIGV*PGFGLLQVKGE
Trigger: TTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACCCCTATATTTCGCACATCTTCATTACCTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000565750.2
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CCA 72 bp AATCATCTGGCTCAAGATCTCTCGGGAATTGTAGTTTaGCCTGTATTCCCCCGGCGATTCCTTCTAAACCAG +
Preference number: 6 (lower is better)
Translates to: NHLAQDLSGIVV*PVFPRRFLLNQ
Trigger: CTGGTTTAGAAGGAATCGCCGGGGGAATACAGGCCAAACTACAATTCCCGAGAGATCTTGAGCCAGATGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000569766.5
CDS CAA 72 bp GATGTGCGAAATATAGGGGTGTGGCCAGGCTTTGGTTaGCTCCAGGTAAAGGGTGAAGGAACTGAAAGAAAC +
Preference number: 6 (lower is better)
Translates to: DVRNIGVWPGFG*LQVKGEGTERN
Trigger: GTTTCTTTCAGTTCCTTCACCCTTTACCTGGAGCAAACCAAAGCCTGGCCACACCCCTATATTTCGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000565750.2
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CAA 72 bp CAATCATCTGGCTCAAGATCTCTCGGGAATTGTAGTTaGGCCTGTATTCCCCCGGCGATTCCTTCTAAACCA +
Preference number: 6 (lower is better)
Translates to: QSSGSRSLGNCS*ACIPPAIPSKP
Trigger: TGGTTTAGAAGGAATCGCCGGGGGAATACAGGCCAAACTACAATTCCCGAGAGATCTTGAGCCAGATGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553077.5
ENST00000563319.5
ENST00000569766.5
CDS CAA 72 bp TCTTTAAAGGATACTGAGATCCAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTGATAAACTCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: SLKDTEIQGHHL*KSPGLVINSLG
Trigger: ACCAAGGGAGTTTATCACCAGCCCGGGAGACTTCAATAGATGATGGCCTTGGATCTCAGTATCCTTTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS CAA 90 bp ATGAATCTTTCTTTAAAGGATACTGAGATCCAAGGCCATCATCTATaGAAGTCTCCCGGGCTGGTGATAAACTCCCTTGGTCATCTGAAC +
Preference number: 6 (lower is better)
Translates to: MNLSLKDTEIQGHHL*KSPGLVINSLGHLN
Trigger: GTTCAGATGACCAAGGGAGTTTATCACCAGCCCGGGAGACTTCAATAGATGATGGCCTTGGATCTCAGTATCCTTTAAAGAAAGATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS GCA 72 bp CCAATTATCTCGTTCACATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCT +
Preference number: 6 (lower is better)
Translates to: PIISFTSSKVMS*RPMVAKLGSRS
Trigger: AGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGTGAACGAGATAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346183.8
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
CDS GCA 72 bp TCTGCTTTGACAAAACCATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCT +
Preference number: 6 (lower is better)
Translates to: SALTKPSSKVMS*RPMVAKLGSRS
Trigger: AGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGGTTTTGTCAAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575270.5
CDS TCA 72 bp GGTTGCACTTCTATTTTCAGTTCACATTGTCCAAAATaGGCTGGTAAAGGCCAGTCTAGTGGAGGTAATGAA +
Preference number: 6 (lower is better)
Translates to: GCTSIFSSHCPK*AGKGQSSGGNE
Trigger: TTCATTACCTCCACTAGACTGGCCTTTACCAGCTCATTTTGGACAATGTGAACTGAAAATAGAAGTGCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000329524.8
ENST00000346183.8
ENST00000349223.9
ENST00000379165.8
ENST00000535127.2
ENST00000549350.5
ENST00000553077.5
ENST00000562171.1
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000565750.2
ENST00000566301.5
ENST00000567152.5
ENST00000569766.5
ENST00000570212.5
ENST00000575270.5
CDS TCA 72 bp CTTCCTGCTGGGACTGGCCAAAACGTAGGTCTCAACTaGAGCAAGTCAAAATTATTACTGGTAAACAAATCA +
Preference number: 6 (lower is better)
Translates to: LPAGTGQNVGLN*SKSKLLLVNKS
Trigger: TGATTTGTTTACCAGTAATAATTTTGACTTGCTTCAGTTGAGACCTACGTTTTGGCCAGTCCCAGCAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS GCA 72 bp TCAGATATAAATTGGTCATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCT +
Preference number: 6 (lower is better)
Translates to: SDINWSSSKVMS*RPMVAKLGSRS
Trigger: AGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGACCAATTTATATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329524.8
ENST00000535127.2
ENST00000562926.5
ENST00000563288.5
ENST00000563319.5
ENST00000563796.5
ENST00000566301.5
CDS GCA 72 bp TTACTGGTAAACAAATCATCATCTAAAGTGATGTCCTaGAGACCAATGGTTGCAAAGTTAGGCTCTCGATCT +
Preference number: 6 (lower is better)
Translates to: LLVNKSSSKVMS*RPMVAKLGSRS
Trigger: AGATCGAGAGCCTAACTTTGCAACCATTGGTCTGCAGGACATCACTTTAGATGATGATTTGTTTACCAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349223.9
CDS TCA 72 bp CAATTCTCGTCAATTTCCTCTACCACGAAAGAGCAGTaGGCAATGATTCAAAACTTAGGTGTTATTTATTCA +
Preference number: 6 (lower is better)
Translates to: QFSSISSTTKEQ*AMIQNLGVIYS
Trigger: TGAATAAATAACACCTAAGTTTTGAATCATTGCTCACTGCTCTTTCGTGGTAGAGGAAATTGACGAGAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535127.2