RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NFATC2IP (Homo sapiens)

Ensembl gene IDs: ENSG00000176953

Ensembl transcript IDs: ENST00000320805.8, ENST00000562977.1, ENST00000564978.5, ENST00000565752.5, ENST00000565919.1, ENST00000568148.1, ENST00000568998.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGGTGGCTCTGAAGGGTCCTCAGGTGAGGAAGACCCCCAGGGCTaGGAATCCACCACCTTCATCCTTCAAAAGAGTACCTCAGTTGTC +
Preference number: 1 (lower is better)
Translates to: KGGSEGSSGEEDPQG*ESTTFILQKSTSVV
Trigger: GACAACTGAGGTACTCTTTTGAAGGATGAAGGTGGTGGATTCTCAGCCCTGGGGGTCTTCCTCACCTGAGGACCCTTCAGAGCCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR TCA 90 bp CCAGTACAGCCCAGCATCAACCAATTAGAAGAAGTGTCTGACTGTTaGGAACAGATGCAGCCAAGGTGTCACCCCGGTGTGTACCAGCTG +
Preference number: 1 (lower is better)
Translates to: PVQPSINQLEEVSDC*EQMQPRCHPGVYQL
Trigger: CAGCTGGTACACACCGGGGTGACACCTTGGCTGCATCTGTTCTCAACAGTCAGACACTTCTTCTAATTGGTTGATGCTGGGCTGTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
3UTR TCA 90 bp CAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTaGGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTAT +
Preference number: 1 (lower is better)
Translates to: QKSTSVVCLRFSQHV*AWSFPASQATTPVY
Trigger: ATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR TCA 90 bp TTAGCAACCAGTACAGCCCAGCATCAACCAATTAGAAGAAGTGTCTaGCTGTTGAGAACAGATGCAGCCAAGGTGTCACCCCGGTGTGTA +
Preference number: 1 (lower is better)
Translates to: LATSTAQHQPIRRSV*LLRTDAAKVSPRCV
Trigger: TACACACCGGGGTGACACCTTGGCTGCATCTGTTCTCAACAGTCAGACACTTCTTCTAATTGGTTGATGCTGGGCTGTACTGGTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
3UTR GCA 90 bp CAAAGTGCTGGGATTACCAGTGAACCTCCATACCCAGCCCAAATATaGATTCTTGGAATTATCTGCAATTGCCCAAGAATGTACAAGCAA +
Preference number: 1 (lower is better)
Translates to: QSAGITSEPPYPAQI*ILGIICNCPRMYKQ
Trigger: TTGCTTGTACATTCTTGGGCAATTGCAGATAATTCCAAGAATGCATATTTGGGCTGGGTATGGAGGTTCACTGGTAATCCCAGCACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR GCA 90 bp AGTGAACCTCCATACCCAGCCCAAATATGCATTCTTGGAATTATCTaGAATTGCCCAAGAATGTACAAGCAACTCCTGAGAATAAACCAA +
Preference number: 1 (lower is better)
Translates to: SEPPYPAQICILGII*NCPRMYKQLLRINQ
Trigger: TTGGTTTATTCTCAGGAGTTGCTTGTACATTCTTGGGCAATTGCAGATAATTCCAAGAATGCATATTTGGGCTGGGTATGGAGGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR TCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCGAAGACCCCCAGGGCTaGGAATCCACCACCTTCATC +
Preference number: 2 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPEDPQG*ESTTFI
Trigger: GATGAAGGTGGTGGATTCTCAGCCCTGGGGGTCTTC...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCCATCCTGGGTACACATaGCACACAAGCACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: LARRVSISCPHDLPALASHPGYT*HTSTEG
Trigger: CCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGATG...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CCA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACTCCCCAAGTCCAGGCTaGGCCGTCAAACAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNSPSPG*AVKQGV
Trigger: CACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGA...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
3UTR-3UTR TCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCTTCAGCCAGCATGTGTaGGCTTGGTCATTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: LARRVSISCPHDLPALASFSQHV*AWSFPA
Trigger: TGCAGGAAATGACCAAGCTCACACATGCTGGCTGAA...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCCAGAGAATCTTTGCATaGGACTGTATTCCTGAGATC +
Preference number: 2 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPQRIFA*DCIPEI
Trigger: GATCTCAGGAATACAGTCCCATGCAAAGATTCTCTG...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCATGAATGTGCTGTTATaGCTTAAATGTGTGCACCAG +
Preference number: 2 (lower is better)
Translates to: LARRVSISCPHDLPALASMNVLL*LKCVHQ
Trigger: CTGGTGCACACATTTAAGGCATAACAGCACATTCAT...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp GATGCAGCCAAGGTGTCACCCCGGTGTGTACCAGCTGGACTTCAGCACTGTGTAATTGACATTGTGGAGTaGCACATGGCAGGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: DAAKVSPRCVPAGLQHCVIDIVE*HMAGQS
Trigger: GCTTTGACCTGCCATGTGGCACTCCACAATGTCAAT...TACACAGTGCTGAAGTCCAGCTGGTACACACCGGGGTGACACCTTGGCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
3UTR-3UTR CCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGTCCCCAAGTCCAGGCTaGGCCGTCAAACAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVSPSPG*AVKQGV
Trigger: CACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGA...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGATCCCCAAGTCCAGGCTaGGCCGTCAAACAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: PHGRSKQYCISRRVNGARSPSPG*AVKQGV
Trigger: CACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGA...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR TCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGAGTGAAAGGGGAGGGGTaGAGGGACATCTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: PHGRSKQYCISRRVNGARVKGEG*RDISKS
Trigger: TGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCAC...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR CAA 90 bp AGGGCTGAGAATCCACCACCTTCATCCTTCAAAAGAGTACCTCAGTaGTCTGCTTACGCTTCAGCCAGCATGTGTGAGCTTGGTCATTTC +
Preference number: 2 (lower is better)
Translates to: RAENPPPSSFKRVPQ*SAYASASMCELGHF
Trigger: GAAATGACCAAGCTCACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATGAAGGTGGTGGATTCTCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp TCCTGGGTACACATGCCACACAAGCACAGAAGGGAACACACGAAAGGATGTTTAATTGACATTGTGGAGTaGCACATGGCAGGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: SWVHMPHKHRREHTKGCLIDIVE*HMAGQS
Trigger: GCTTTGACCTGCCATGTGGCACTCCACAATGTCAAT...TAAACATCCTTTCGTGTGTTCCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGACCAAGTCACAGAGGCTaGAAAACTCAGCATGACTTG +
Preference number: 2 (lower is better)
Translates to: PHGRSKQYCISRRVNGARPSHRG*KTQHDL
Trigger: CAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGG...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGAAGTACCTCAGTTGTCTaGTTACGCTTCAGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: PHGRSKQYCISRRVNGARSTSVV*LRFSQH
Trigger: ATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACT...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAATTCAAAGACATGGGTaGTTATGGGAGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKIQRHG*LWERMV
Trigger: CACCATCCTCTCCCATAAGCACCCATGTCTTTGAAT...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAAACTCAGCATGACTTGTaGACGGAGCCACAGGCCACC +
Preference number: 2 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKTQHDL*TEPQAT
Trigger: GGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGT...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR GCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAATATGCCTTAAATGTGTaGACCAGGAAATGCAAACTA +
Preference number: 2 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKYALNV*TRKCKL
Trigger: TAGTTTGCATTTCCTGGTGCACACATTTAAGGCATA...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR TCA 72 bp CATGTTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATaGTCTGCCCGCCTTGGCCTCCCAAAGCCCCCTTTT +
Preference number: 3 (lower is better)
Translates to: HVGQEGLNLLPS*SARLGLPKPPF
Trigger: AAAAGGGGGCTTTGGGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR TCA 72 bp GACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATaGCTTGTGGACGGAGCCACAGGCCACCCAGGGCAA +
Preference number: 3 (lower is better)
Translates to: DISKSQRLQNSA*LVDGATGHPGQ
Trigger: TTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
3UTR GCA 72 bp GGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTaGAAAACTCAGCATGACTTGTGGACGGAGCCACAG +
Preference number: 3 (lower is better)
Translates to: GRGEGTSPSHRG*KTQHDLWTEPQ
Trigger: CTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
3UTR GCA 72 bp TGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTaGCCGCCTTGGCCTCCCAAAGCCCCCTTTTTAATT +
Preference number: 3 (lower is better)
Translates to: WPGGSQSPALMI*PPWPPKAPFLI
Trigger: AATTAAAAAGGGGGCTTTGGGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR TCA 72 bp ACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTaGGCTTGGTCATTTCCTGCAAGCCAGGCAACCACA +
Preference number: 3 (lower is better)
Translates to: TSVVCLRFSQHV*AWSFPASQATT
Trigger: TGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CAA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAAAACTCAGCATGACTaGTGGACGGAGCCACAGGCC +
Preference number: 3 (lower is better)
Translates to: AASSRRVSHRSKENLENQKTQHD*WTEPQA
Trigger: GGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTT...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR TCA 72 bp CCCAGCATCAACCAATTAGAAGAAGTGTCTGACTGTTaGGAACAGATGCAGCCAAGGTGTCACCCCGGTGTG +
Preference number: 3 (lower is better)
Translates to: PSINQLEEVSDC*EQMQPRCHPGV
Trigger: CACACCGGGGTGACACCTTGGCTGCATCTGTTCTCAACAGTCAGACACTTCTTCTAATTGGTTGATGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
3UTR-3UTR CAA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAG +
Preference number: 3 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTSHSLI*LQLKDK
Trigger: CTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACT...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
3UTR-3UTR CAA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAAAAACTCAGCATGACTaGTGGACGGAGCCACAGGCC +
Preference number: 3 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKKTQHD*WTEPQA
Trigger: GGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTT...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CAA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAACCAGCATGTGTGAGCTaGGTCATTTCCTGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKPACVS*VISCKP
Trigger: TGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CAA 90 bp TCCTGGGTACACATGCCACACAAGCACAGAAGGGAACACACGAAAGGATGTTTAAAAAGAGTACCTCAGTaGTCTGCTTACGCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: SWVHMPHKHRREHTKGCLKRVPQ*SAYASA
Trigger: GGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTT...TAAACATCCTTTCGTGTGTTCCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CAA 90 bp CAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAG +
Preference number: 3 (lower is better)
Translates to: QGNNTHITHQVVNGSKPGSHSLI*LQLKDK
Trigger: CTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACT...CCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
3UTR-3UTR CAA 90 bp TCCTGGGTACACATGCCACACAAGCACAGAAGGGAACACACGAAAGGATGTTTAGACAAAAGTCACTCCTaGATTTTGCTGCAGCTTAAA +
Preference number: 3 (lower is better)
Translates to: SWVHMPHKHRREHTKGCLDKSHS*ILLQLK
Trigger: TTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTC...TAAACATCCTTTCGTGTGTTCCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CAA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAGACAAAAGTCACTCCTaGATTTTGCTGCAGCTTAAA +
Preference number: 3 (lower is better)
Translates to: AASSRRVSHRSKENLENQDKSHS*ILLQLK
Trigger: TTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTC...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR GCA 72 bp CCATACCCAGCCCAAATATGCATTCTTGGAATTATCTaGAATTGCCCAAGAATGTACAAGCAACTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: PYPAQICILGII*NCPRMYKQLLR
Trigger: TCTCAGGAGTTGCTTGTACATTCTTGGGCAATTGCAGATAATTCCAAGAATGCATATTTGGGCTGGGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR-3UTR CAA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAAAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAG +
Preference number: 3 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKSHSLI*LQLKDK
Trigger: CTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACT...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCCCCTGCACCCGGAGCTaGAGCTGTTGGGACGTCTCT +
Preference number: 4 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPPCTRS*SCWDVS
Trigger: AGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGG...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCCCCTGCACCCGGAGCTaGAGCTGTTGGGACGTCTCT +
Preference number: 4 (lower is better)
Translates to: LARRVSISCPHDLPALASPCTRS*SCWDVS
Trigger: AGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGG...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCTCCCCAAGTCCAGGCTaGGCCGTCAAACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPSPSPG*AVKQGV
Trigger: CACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGA...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCCTGCAGCGATCCTTCTaGCTGGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LARRVSISCPHDLPALASLQRSF*LGLPKC
Trigger: GCACTTTGGGAGGCCCAGGCAGAAGGATCGCTGCAG...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCCTCGAACTCCTGGGCTaGAGCGATCCTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LARRVSISCPHDLPALASLELLG*SDPSAW
Trigger: CCAGGCAGAAGGATCGCTGCAGCCCAGGAGTTCGAG...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCTGGTCCACCACACTCTaGAGGGGCTCCGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LARRVSISCPHDLPALASWSTTL*RGSDFL
Trigger: GAGGAAGTCGGAGCCCCTGCAGAGTGTGGTGGACCA...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564978.5
CDS-3UTR CCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCACTCAGCATGACTTGTaGACGGAGCCACAGGCCACC +
Preference number: 4 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPTQHDL*TEPQAT
Trigger: GGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGT...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCTGGCAAGGATAAGGAGAAAAGGGCGGCCTCAAGTAGGAGGGTCAGTCACCGTGTGGCCTGTATCCGGTaGCAAGGGGTCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: AGKDKEKRAASSRRVSHRVACIR*QGVRGT
Trigger: GGTGCCCCTGACCCCTTGGCACCGGATACAGGCCAC...ACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCCTTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTCGGCACCGCGAGCGGTaGCGACCTCCAGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIRHRER*RPPEFP
Trigger: AGGAAATTCTGGAGGTCGCCACCGCTCGCGGTGCCG...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTGACCCTGAGGTGGCTTaGGGCTCAGACAGGAACGGA +
Preference number: 4 (lower is better)
Translates to: RESHSPQVQAGPSNREWGDPEVA*GSDRNG
Trigger: TCCGTTCCTGTCTGAGCCCCAAGCCACCTCAGGGTC...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCGGGGTTTCACCATGTTaGCCAGGAGGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPGVSPC*PGGSQS
Trigger: AGATTGAGACCCTCCTGGCCAACATGGTGAAACCCC...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAGGTCCCCAGATTCCATaGCCAGGTCAGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTGPQIP*PGQLAA
Trigger: AGCTGCCAGCTGACCTGGGCATGGAATCTGGGGACC...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACGGTCCCCAGATTCCATaGCCAGGTCAGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNGPQIP*PGQLAA
Trigger: AGCTGCCAGCTGACCTGGGCATGGAATCTGGGGACC...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTGGTCCCCAGATTCCATaGCCAGGTCAGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIGPQIP*PGQLAA
Trigger: AGCTGCCAGCTGACCTGGGCATGGAATCTGGGGACC...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCTTTAAGCGATTCCCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LARRVSISCPHDLPALASFKRFP*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGGGAATCGCTTAAA...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGCAGCGTGCCCCGGGATaGAGACCGCTGGGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVQRAPG*RPLGPR
Trigger: CCTCGGGCCCAGCGGTCTCCATCCCGGGGCACGCTG...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCAGGTGGGTGGCCATGTaGTCCACCACACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGRWVAM*STTLCR
Trigger: CCTGCAGAGTGTGGTGGACCACATGGCCACCCACCT...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAGGTGGGTGGCCATGTaGTCCACCACACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTRWVAM*STTLCR
Trigger: CCTGCAGAGTGTGGTGGACCACATGGCCACCCACCT...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCACACCCCAAGGTGGGTaGCCATGTGGTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGTPQGG*PCGPPH
Trigger: GTGTGGTGGACCACATGGCCACCCACCTTGGGGTGT...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACACGGAGCTGGAGCTGTTaGGACGTCTCTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTRSWSC*DVSVAS
Trigger: AGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCG...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTCGGAGCTGGAGCTGTTaGGACGTCTCTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIRSWSC*DVSVAS
Trigger: AGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCG...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTTCCCCAAGTCCAGGCTaGGCCGTCAAACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLISPSPG*AVKQGV
Trigger: CACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGA...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTACTCAGCATGACTTGTaGACGGAGCCACAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RESHSPQVQAGPSNREWGTQHDL*TEPQAT
Trigger: GGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGT...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCTGCCTCCTGAGTAGCTaGGATTACAAGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: LARRVSISCPHDLPALASCLLSS*DYKHAP
Trigger: TGGCGCATGCTTGTAATCCCAGCTACTCAGGAGGCA...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR TCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAGCCCCAGACCTCAATaGGGTCCCCAGATTCCATGC +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTSPRPQ*GPQIPC
Trigger: GCATGGAATCTGGGGACCTCATTGAGGTCTGGGGCT...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTGAAGACCCCCAGGGCTaGGAATCCACCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIEDPQG*ESTTFI
Trigger: GATGAAGGTGGTGGATTCTCAGCCCTGGGGGTCTTC...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACACGAATCTGCCAGCTCTaGCTCTTCCTCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTRICQL*LFLIPW
Trigger: CCAGGGGATGAGGAAGAGGCAGAGCTGGCAGATTCG...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp CAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACTGCAGCGATCCTTCTaGCTGGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QVTEAAKLSMTCGRSHRPLQRSF*LGLPKC
Trigger: GCACTTTGGGAGGCCCAGGCAGAAGGATCGCTGCAG...TGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAACTGTCTCTGTTCACTaGAGCCTCCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTTVSVH*SLHLPG
Trigger: ACCCGGGAGGTGGAGGCTGCAGTGAACAGAGACAGT...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACCTCTTGACCCTGAGGTaGCTTGGGGCTCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNLLTLR*LGAQTG
Trigger: TCCTGTCTGAGCCCCAAGCCACCTCAGGGTCAAGAG...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTCAAAAGGATCCTGCTTaGGGACACCCCAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RESHSPQVQAGPSNREWGQKDPA*GHPKVG
Trigger: ACCCACCTTGGGGTGTCCCCAAGCAGGATCCTTTTG...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp GCTGGCAAGGATAAGGAGAAAAGGGCGGCCTCAAGTAGGAGGGTCAGTCACCGTGTCCCGACAGTCCCATaGCCTCCTCATAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AGKDKEKRAASSRRVSHRVPTVP*PPHSGT
Trigger: TGTCCCACTATGAGGAGGCCATGGGACTGTCGGGAC...ACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCAGCAGTGGTGGAACCTTaGCTCACTGCAATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: DGGERGGVKGHLQVTEAAAVVEP*LTAISA
Trigger: GGCGGAGATTGCAGTGAGCCAAGGTTCCACCACTGC...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACGCAGCTCCAGCTGATTaGCACTGTGTGGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNAAPAD*HCVGTW
Trigger: CCACGTTCCCACACAGTGCCAATCAGCTGGAGCTGC...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR TCA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTTGGCAGCTCCCTGCCTaGAAGCTTTGTCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: RESHSPQVQAGPSNREWGWQLPA*KLCPIK
Trigger: TTTGATGGGACAAAGCTTTCAGGCAGGGAGCTGCCA...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCAGTGAAAGGGGAGGGGTaGAGGGACATCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: DGGERGGVKGHLQVTEAAVKGEG*RDISKS
Trigger: TGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCAC...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCCTGCCCTCATGATCTaGCCGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSPALMI*PPWPPK
Trigger: TTTGGGAGGCCAAGGCGGGCAGATCATGAGGGCAGG...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGGGGTCTCTGGGAGGGTaGGCCCTTCCACCAAGACCA +
Preference number: 4 (lower is better)
Translates to: ELGHFLQARQPHQCISLKGSLGG*ALPPRP
Trigger: TGGTCTTGGTGGAAGGGCCCACCCTCCCAGAGACCC...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCACACCCCAAGGTGGGTaGCCATGTGGTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSTPQGG*PCGPPH
Trigger: GTGTGGTGGACCACATGGCCACCCACCTTGGGGTGT...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACCAAAAGGATCCTGCTTaGGGACACCCCAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNQKDPA*GHPKVG
Trigger: ACCCACCTTGGGGTGTCCCCAAGCAGGATCCTTTTG...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCGGAGCTGGAGCTGTTaGGACGTCTCTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSRSWSC*DVSVAS
Trigger: AGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCG...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp CAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGCCCTGCACCCGGAGCTaGAGCTGTTGGGACGTCTCT +
Preference number: 4 (lower is better)
Translates to: QGNNTHITHQVVNGSKPGPCTRS*SCWDVS
Trigger: AGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGG...CCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTCCGGTGTGTACCAGCTaGACTTCAGCACTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: RESHSPQVQAGPSNREWGPVCTS*TSALCS
Trigger: ACTACACAGTGCTGAAGTCCAGCTGGTACACACCGG...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
3UTR CAA 72 bp TCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTaGTGGACGGAGCCACAGGCCACCCAGGGCAACAAC +
Preference number: 4 (lower is better)
Translates to: SPSHRGCKTQHD*WTEPQATQGNN
Trigger: GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCGGAATCTCGAGACAGTaGGACTTCCAGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGGISRQ*DFQCLV
Trigger: CACCAGACACTGGAAGTCTCACTGTCTCGAGATTCC...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTGGCAGCTCCCTGCCTaGAAGCTTTGTCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGWQLPA*KLCPIK
Trigger: TTTGATGGGACAAAGCTTTCAGGCAGGGAGCTGCCA...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp CCAGCATGTGTGAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTAGAAGACCCCCAGGGCTaGGAATCCACCACCTTCATC +
Preference number: 4 (lower is better)
Translates to: PACVSLVISCKPGNHTSVEDPQG*ESTTFI
Trigger: GATGAAGGTGGTGGATTCTCAGCCCTGGGGGTCTTC...TACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCACCACTATCTACCCATaGGACTGGCAAAAATTAGGT +
Preference number: 4 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPTTIYP*DWQKLG
Trigger: ACCTAATTTTTGCCAGTCTCATGGGTAGATAGTGGT...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCACCTCCCGGGTTCAAGTaGTTCTCCTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPPPGFK*FSCLCL
Trigger: GAGGCAGAGGCAGGAGAATCACTTGAACCCGGGAGG...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCACACTACGTCCAGCGTaGCCCGGGATGGAGACCGCT +
Preference number: 4 (lower is better)
Translates to: KWLTALNQGQQERGQKSLTLRPA*PGMETA
Trigger: AGCGGTCTCCATCCCGGGGCACGCTGGACGTAGTGT...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCATGGTCCACCACACTCTaGAGGGGCTCCGACATCCTG +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPWSTTL*RGSDIL
Trigger: CAGGATGTCGGAGCCCCTGCAGAGTGTGGTGGACCA...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCCATCCTGGGTACACATaGCACACAAGCACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGHPGYT*HTSTEG
Trigger: CCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGATG...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCACCTGCCCTCATGATCTaGCCGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPPALMI*PPWPPK
Trigger: TTTGGGAGGCCAAGGCGGGCAGATCATGAGGGCAGG...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CCAGCATGTGTGAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTAGGAACCTTGGCTCACTaGAATCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PACVSLVISCKPGNHTSVGTLAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGATTGCAGTGAGCCAAGGTTCC...TACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCGGAACCTTGGCTCACTaGAATCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSGTLAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGATTGCAGTGAGCCAAGGTTCC...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGCCGTCAAACAGGGAGTaGGGTGTCAGCCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGPSNRE*GVSPRP
Trigger: AGGTCTGGGGCTGACACCCCACTCCCTGTTTGACGG...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp AAGGGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGTCCCCAAGTCCAGGCTaGGCCGTCAAACAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: KGHLQVTEAAKLSMTCGRSPSPG*AVKQGV
Trigger: CACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGA...CCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCAGCCTCCAGAGTAGCTaGGACTACAGGTGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSSLQSS*DYRCAP
Trigger: TGGCGCACACCTGTAGTCCCAGCTACTCTGGAGGCT...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CCAGCATGTGTGAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTAAGCCTCCAGAGTAGCTaGGACTACAGGTGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: PACVSLVISCKPGNHTSVSLQSS*DYRCAP
Trigger: TGGCGCACACCTGTAGTCCCAGCTACTCTGGAGGCT...TACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTCCTCATAGTGGGACATaGGGGTCTTTAGAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIPHSGT*GSLEGN
Trigger: ATTCCCCTCTAAAGACCCTCATGTCCCACTATGAGG...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCCCTCATAGTGGGACATaGGGGTCTTTAGAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGPHSGT*GSLEGN
Trigger: ATTCCCCTCTAAAGACCCTCATGTCCCACTATGAGG...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp AAGGGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCCCAGACCTCAATaGGGTCCCCAGATTCCATGC +
Preference number: 4 (lower is better)
Translates to: KGHLQVTEAAKLSMTCGRSPRPQ*GPQIPC
Trigger: GCATGGAATCTGGGGACCTCATTGAGGTCTGGGGCT...CCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp GATGCAGCCAAGGTGTCACCCCGGTGTGTACCAGCTGGACTTCAGCACTGTGTATCACTCAGGCTGATGTaGAGTGGCACTGTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: DAAKVSPRCVPAGLQHCVSLRLM*SGTVSV
Trigger: AACAGAGACAGTGCCACTGCACATCAGCCTGAGTGA...TACACAGTGCTGAAGTCCAGCTGGTACACACCGGGGTGACACCTTGGCTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCCAAAAGAGGTCTTCCTaGCTTGAAATCCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGQKRSS*LEIHAP
Trigger: GGGGGCATGGATTTCAAGGCAGGAAGACCTCTTTTG...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR CCA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGCCACAGGCTCCGCCATaGCACACTTTCCTCCACAAC +
Preference number: 4 (lower is better)
Translates to: ELGHFLQARQPHQCISLKPQAPP*HTFLHN
Trigger: GTTGTGGAGGAAAGTGTGCCATGGCGGAGCCTGTGG...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCAGTCCCGACAGTCCCATaGCCTCCTCATAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPVPTVP*PPHSGT
Trigger: TGTCCCACTATGAGGAGGCCATGGGACTGTCGGGAC...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCCCGTCAAACAGGGAGTaGGGTGTCAGCCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: KWLTALNQGQQERGQKSLPSNRE*GVSPRP
Trigger: AGGTCTGGGGCTGACACCCCACTCCCTGTTTGACGG...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp CAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGACTCAGCATGACTTGTaGACGGAGCCACAGGCCACC +
Preference number: 4 (lower is better)
Translates to: QGNNTHITHQVVNGSKPGTQHDL*TEPQAT
Trigger: GGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGT...CCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCCTGCAATTGACATTGTaGAGTGCCACATGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGLQLTL*SATWQV
Trigger: GACCTGCCATGTGGCACTCCACAATGTCAATTGCAG...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCAGCAGTGGTGGAACCTTaGCTCACTGCAATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPAVVEP*LTAISA
Trigger: GGCGGAGATTGCAGTGAGCCAAGGTTCCACCACTGC...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCGTACCACACAGTCAATaGTGTCAGCCACTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSVPHSQ*CQPLRA
Trigger: AGCTCGGAGTGGCTGACATCATTGACTGTGTGGTAC...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCAGTGAAAGGGGAGGGGTaGAGGGACATCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPVKGEG*RDISKS
Trigger: TGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCAC...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCGAGGTCTTCCTGCCTTaGAATCCATGCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KWLTALNQGQQERGQKSLEVFLP*NPCPQP
Trigger: TGGCTGGGGGCATGGATTTCAAGGCAGGAAGACCTC...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR GCA 90 bp CAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGGAGACCACTCGAATCTaGCAGCTCTGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QGNNTHITHQVVNGSKPGETTRI*QLCLFL
Trigger: GAGGAAGAGGCAGAGCTGGCAGATTCGAGTGGTCTC...CCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACATTGAGTGCCCGAGTATaGGTTCTGCTTTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTLSARV*VLLLVL
Trigger: AAGGACCAAAAGCAGAACGCATACTCGGGCACTCAA...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACACCAAGTCACAGAGGCTaGAAAACTCAGCATGACTTG +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTPSHRG*KTQHDL
Trigger: CAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGG...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCATTGACATTGTGGAGTaGCACATGGCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGIDIVE*HMAGQS
Trigger: GCTTTGACCTGCCATGTGGCACTCCACAATGTCAAT...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAACTCGAACTCCTGGGCTaGAGCGATCCTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AASSRRVSHRSKENLENQLELLG*SDPSAW
Trigger: CCAGGCAGAAGGATCGCTGCAGCCCAGGAGTTCGAG...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAGTCGCCAGGCTGGAGTaGAGTGGTGGAACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AASSRRVSHRSKENLENQVARLE*SGGTLA
Trigger: AGCCAAGGTTCCACCACTGCACTCCAGCCTGGCGAC...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAAACTGGAATTCACATaGCACCTAGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTKLEFT*HLDRLA
Trigger: AGCCAGCCTGTCTAGGTGGCATGTGAATTCCAGTTT...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR CCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGAGGTGGGTGGCCATGTaGTCCACCACACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVRWVAM*STTLCR
Trigger: CCTGCAGAGTGTGGTGGACCACATGGCCACCCACCT...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAACACCCCAAGGTGGGTaGCCATGTGGTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: AASSRRVSHRSKENLENQTPQGG*PCGPPH
Trigger: GTGTGGTGGACCACATGGCCACCCACCTTGGGGTGT...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCGTCCCGACAGTCCCATaGCCTCCTCATAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: KWLTALNQGQQERGQKSLVPTVP*PPHSGT
Trigger: TGTCCCACTATGAGGAGGCCATGGGACTGTCGGGAC...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGCCGTCAAACAGGGAGTaGGGTGTCAGCCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVPSNRE*GVSPRP
Trigger: AGGTCTGGGGCTGACACCCCACTCCCTGTTTGACGG...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CCAGCATGTGTGAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTACAGGCTGATGTGCAGTaGCACTGTCTCTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: PACVSLVISCKPGNHTSVQADVQ*HCLCSL
Trigger: CAGTGAACAGAGACAGTGCCACTGCACATCAGCCTG...TACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
3UTR CAA 72 bp AGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGAGCTaGGTCATTTCCTGCAAGCCAGGCAACCACACCAGT +
Preference number: 4 (lower is better)
Translates to: SCLLTLQPACVS*VISCKPGNHTS
Trigger: ACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGGCTGAAGCGTAAGCAGACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGGGAATCTCGAGACAGTaGGACTTCCAGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGGISRQ*DFQCLV
Trigger: CACCAGACACTGGAAGTCTCACTGTCTCGAGATTCC...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp CAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTGGCAGCTCCCTGCCTaGAAGCTTTGTCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: QGNNTHITHQVVNGSKPGWQLPA*KLCPIK
Trigger: TTTGATGGGACAAAGCTTTCAGGCAGGGAGCTGCCA...CCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR GCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTATTCAAAGACATGGGTaGTTATGGGAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIIQRHG*LWERMV
Trigger: CACCATCCTCTCCCATAAGCACCCATGTCTTTGAAT...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGTCGCCAGGCTGGAGTaGAGTGGTGGAACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKVARLE*SGGTLA
Trigger: AGCCAAGGTTCCACCACTGCACTCCAGCCTGGCGAC...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAACAAGCATGCGCCACTaGACCCAGCTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTTSMRH*TQLIFV
Trigger: TACAAAAATTAGCTGGGTGCAGTGGCGCATGCTTGT...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR TCA 90 bp CAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGCCTCACTTAACTTCTTaGGTGCCCGAGTATGCGTTC +
Preference number: 4 (lower is better)
Translates to: QGNNTHITHQVVNGSKPGPHLTS*VPEYAF
Trigger: GAACGCATACTCGGGCACTCAAGAAGTTAAGTGAGG...CCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR TCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAAGCCCCAGACCTCAATaGGGTCCCCAGATTCCATGC +
Preference number: 4 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKSPRPQ*GPQIPC
Trigger: GCATGGAATCTGGGGACCTCATTGAGGTCTGGGGCT...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCATTCAGCCAGCATGTGTaGGCTTGGTCATTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPFSQHV*AWSFPA
Trigger: TGCAGGAAATGACCAAGCTCACACATGCTGGCTGAA...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCATGGGACTGTATTCCTaGGATCCCAAACCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSMGLYS*DPKPKG
Trigger: TCCCTTTGGTTTGGGATCTCAGGAATACAGTCCCAT...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGGAAGTGTCTGACTGTTaGGAACAGATGCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ELGHFLQARQPHQCISLKEVSDC*EQMQPR
Trigger: CCTTGGCTGCATCTGTTCTCAACAGTCAGACACTTC...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGAGGGGTGGTGGGGATTaGAGCAAACTGGAATTCACA +
Preference number: 4 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGRGGGD*SKLEFT
Trigger: TGTGAATTCCAGTTTGCTGCAATCCCCACCACCCCT...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR CCA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGTATGCGTTCTGCTTTTaGTCCTTGGTGAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGYAFCF*SLVKVG
Trigger: CCCCACCTTCACCAAGGACCAAAAGCAGAACGCATA...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCACAGAGAATCTTTGCATaGGACTGTATTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: DGGERGGVKGHLQVTEAAQRIFA*DCIPEI
Trigger: GATCTCAGGAATACAGTCCCATGCAAAGATTCTCTG...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCGGGGTTTCACCATGTTaGCCAGGAGGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: KWLTALNQGQQERGQKSLGVSPC*PGGSQS
Trigger: AGATTGAGACCCTCCTGGCCAACATGGTGAAACCCC...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGTGAAAGGGGAGGGGTaGAGGGACATCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKVKGEG*RDISKS
Trigger: TGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCAC...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp GCTGGCAAGGATAAGGAGAAAAGGGCGGCCTCAAGTAGGAGGGTCAGTCACCGTATTAGAAGAAGTGTCTaGCTGTTGAGAACAGATGCA +
Preference number: 4 (lower is better)
Translates to: AGKDKEKRAASSRRVSHRIRRSV*LLRTDA
Trigger: TGCATCTGTTCTCAACAGTCAGACACTTCTTCTAAT...ACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCCTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR TCA 90 bp GATGCAGCCAAGGTGTCACCCCGGTGTGTACCAGCTGGACTTCAGCACTGTGTAAAAAAGCTGAAAAAGTaGAGAGCTGTACCATGTCGT +
Preference number: 4 (lower is better)
Translates to: DAAKVSPRCVPAGLQHCVKKLKK*RAVPCR
Trigger: ACGACATGGTACAGCTCTTCACTTTTTCAGCTTTTT...TACACAGTGCTGAAGTCCAGCTGGTACACACCGGGGTGACACCTTGGCTGCATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGACTTCGCTGTCACTGTTaGTGTTATCCCGGGACGCGA +
Preference number: 4 (lower is better)
Translates to: PHGRSKQYCISRRVNGARLRCHC*CYPGTR
Trigger: TCGCGTCCCGGGATAACAGCAACAGTGACAGCGAAG...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCAAGTACCTCAGTTGTCTaGTTACGCTTCAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPSTSVV*LRFSQH
Trigger: ATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACT...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp AAGGGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGTACCTCAGTTGTCTaGTTACGCTTCAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KGHLQVTEAAKLSMTCGRSTSVV*LRFSQH
Trigger: ATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACT...CCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGATTGACATTGTGGAGTaGCACATGGCAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGIDIVE*HMAGQS
Trigger: GCTTTGACCTGCCATGTGGCACTCCACAATGTCAAT...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCTGGCAAGGATAAGGAGAAAAGGGCGGCCTCAAGTAGGAGGGTCAGTCACCGTTACCCAGCCCAAATATaGATTCTTGGAATTATCTGC +
Preference number: 4 (lower is better)
Translates to: AGKDKEKRAASSRRVSHRYPAQI*ILGIIC
Trigger: GCAGATAATTCCAAGAATGCATATTTGGGCTGGGTA...ACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCCTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGACTGTTGAGAACAGATaGAGCCAAGGTGTCACCCCG +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVTVENR*SQGVTP
Trigger: CGGGGTGACACCTTGGCTGCATCTGTTCTCAACAGT...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGCAGGCTGGAGTGCAGTaGTGGAACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEQAGVQ*WNLGSL
Trigger: CAGTGAGCCAAGGTTCCACCACTGCACTCCAGCCTG...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGGAACAAAGAAAGGGGTaGTGGGGATTGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGEQRKG*WGLQQT
Trigger: AGTTTGCTGCAATCCCCACCACCCCTTTCTTTGTTC...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR TCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGGCTTTTGGTCCTTGGTaGAGGTGGGGACAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEAFGPW*RWGQRR
Trigger: TCTCCTCTGTCCCCACCTTCACCAAGGACCAAAAGC...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR TCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGGAATCTCGAGACAGTaGGACTTCCAGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKGISRQ*DFQCLV
Trigger: CACCAGACACTGGAAGTCTCACTGTCTCGAGATTCC...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGTTCAGCCAGCATGTGTaGGCTTGGTCATTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVFSQHV*AWSFPA
Trigger: TGCAGGAAATGACCAAGCTCACACATGCTGGCTGAA...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGCCCGAGTATGCGTTCTaGTTTTGGTCCTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVPEYAF*FWSLVK
Trigger: CTTCACCAAGGACCAAAAGCAGAACGCATACTCGGG...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR GCA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTTATGCCTTAAATGTGTaGACCAGGAAATGCAAACTA +
Preference number: 4 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIYALNV*TRKCKL
Trigger: TAGTTTGCATTTCCTGGTGCACACATTTAAGGCATA...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAAGTGGCCTGTATCCGGTaGCAAGGGGTCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKVACIR*QGVRGT
Trigger: GGTGCCCCTGACCCCTTGGCACCGGATACAGGCCAC...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGCAGGAACGGAGATCCTaGAGGCGCTTGTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEQERRS*RRLFTS
Trigger: TGAGGTGAACAAGCGCCTCCAGGATCTCCGTTCCTG...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp TCCTGGGTACACATGCCACACAAGCACAGAAGGGAACACACGAAAGGATGTTTACTGCAATTGACATTGTaGAGTGCCACATGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SWVHMPHKHRREHTKGCLLQLTL*SATWQV
Trigger: GACCTGCCATGTGGCACTCCACAATGTCAATTGCAG...TAAACATCCTTTCGTGTGTTCCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR CAA 72 bp GTGTCCCCCACTTTAGGCAATGTGTGTAAACTGCAATaGACATTGTGGAGTGCCACATGGCAGGTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VSPTLGNVCKLQ*TLWSATWQVKA
Trigger: TGCTTTGACCTGCCATGTGGCACTCCACAATGTCAATTGCAGTTTACACACATTGCCTAAAGTGGGGGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGGTACCACACAGTCAATaGTGTCAGCCACTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEVPHSQ*CQPLRA
Trigger: AGCTCGGAGTGGCTGACATCATTGACTGTGTGGTAC...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGATGGGACTGTATTCCTaGGATCCCAAACCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVMGLYS*DPKPKG
Trigger: TCCCTTTGGTTTGGGATCTCAGGAATACAGTCCCAT...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAGTGTGCACCAGGAAATaGAAACTAGAAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AASSRRVSHRSKENLENQVCTRK*KLERVA
Trigger: AGCCACCCTTTCTAGTTTGCATTTCCTGGTGCACAC...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCATTCTTGGAATTATCTaGAATTGCCCAAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: PQATQGNNTHITHQVVNGILGII*NCPRMY
Trigger: GTACATTCTTGGGCAATTGCAGATAATTCCAAGAAT...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp GCTGGCAAGGATAAGGAGAAAAGGGCGGCCTCAAGTAGGAGGGTCAGTCACCGTATTCTTGGAATTATCTaGAATTGCCCAAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: AGKDKEKRAASSRRVSHRILGII*NCPRMY
Trigger: GTACATTCTTGGGCAATTGCAGATAATTCCAAGAAT...ACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCCTTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGTTTAAGCGATTCCCCTaGCTCAGCCTCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEFKRFP*LSLQSS
Trigger: GCTACTCTGGAGGCTGAGGCAGGGGAATCGCTTAAA...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAATTGTGGAGTGCCACATaGCAGGTCAAAGCAATACTG +
Preference number: 4 (lower is better)
Translates to: AASSRRVSHRSKENLENQLWSAT*QVKAIL
Trigger: CAGTATTGCTTTGACCTGCCATGTGGCACTCCACAA...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGAGCTGCTTTTAACCTCTaGAACCAAGGCGCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PHGRSKQYCISRRVNGARAAFNL*NQGAKD
Trigger: ATCTTTGGCGCCTTGGTTTCAGAGGTTAAAAGCAGC...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564978.5
3UTR CAA 72 bp AATCCACCACCTTCATCCTTCAAAAGAGTACCTCAGTaGTCTGCTTACGCTTCAGCCAGCATGTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NPPPSSFKRVPQ*SAYASASMCEL
Trigger: AAGCTCACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATGAAGGTGGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGCCAAGTCACAGAGGCTaGAAAACTCAGCATGACTTG +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEPSHRG*KTQHDL
Trigger: CAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGG...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp AAGGGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGTATGCCTTAAATGTGTaGACCAGGAAATGCAAACTA +
Preference number: 4 (lower is better)
Translates to: KGHLQVTEAAKLSMTCGRYALNV*TRKCKL
Trigger: TAGTTTGCATTTCCTGGTGCACACATTTAAGGCATA...CCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAAACTCCATGAGAAAATaGGCAATGCACAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKNSMRK*AMHRKG
Trigger: TCCCTTCCTGTGCATTGCCCATTTTCTCATGGAGTT...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAACAGGCTGGAGTGCAGTaGTGGAACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKQAGVQ*WNLGSL
Trigger: CAGTGAGCCAAGGTTCCACCACTGCACTCCAGCCTG...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAACCTCATCGCTGTCGGTaGCCAAGTCCACAGACACTA +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKPHRCR*PSPQTL
Trigger: TAGTGTCTGTGGACTTGGTCACCGACAGCGATGAGG...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR TCA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGGTAGTGTTCTCAATATaGAAGGAAAAGCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVVVFSI*KEKLNS
Trigger: GCTGTTCAGCTTTTCCTTTCATATTGAGAACACTAC...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CCA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAACAGAGAATCTTTGCATaGGACTGTATTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKQRIFA*DCIPEI
Trigger: GATCTCAGGAATACAGTCCCATGCAAAGATTCTCTG...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR TCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGACCACTATCTACCCATaGGACTGGCAAAAATTAGGT +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKETTIYP*DWQKLG
Trigger: ACCTAATTTTTGCCAGTCTCATGGGTAGATAGTGGT...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGAATGAATGTGCTGTTATaGCTTAAATGTGTGCACCAG +
Preference number: 4 (lower is better)
Translates to: PHGRSKQYCISRRVNGARMNVLL*LKCVHQ
Trigger: CTGGTGCACACATTTAAGGCATAACAGCACATTCAT...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
3UTR CAA 72 bp GTCAACAGGAGAGGGGACAAAAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAGTTCTACCTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: VNRRGDKSHSLI*LQLKDKFYLSL
Trigger: TAAGCTGAGGTAGAACTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTCCCCTCTCCTGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR TCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAACCTCATAGTGGGACATaGGGGTCTTTAGAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKPHSGT*GSLEGN
Trigger: ATTCCCCTCTAAAGACCCTCATGTCCCACTATGAGG...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp CCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAAGAGTACCCAGCCCAAATATaGATTCTTGGAATTATCTGC +
Preference number: 4 (lower is better)
Translates to: PQVGGSVTVLKKIWKTKEYPAQI*ILGIIC
Trigger: GCAGATAATTCCAAGAATGCATATTTGGGCTGGGTA...CTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAACCAAGTCACAGAGGCTaGAAAACTCAGCATGACTTG +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKPSHRG*KTQHDL
Trigger: CAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGG...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAAGTGTGCACCAGGAAATaGAAACTAGAAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKVCTRK*KLERVA
Trigger: AGCCACCCTTTCTAGTTTGCATTTCCTGGTGCACAC...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAATTGTGGAGTGCCACATaGCAGGTCAAAGCAATACTG +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKLWSAT*QVKAIL
Trigger: CAGTATTGCTTTGACCTGCCATGTGGCACTCCACAA...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAAATTCAAAGACATGGGTaGTTATGGGAGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKIQRHG*LWERMV
Trigger: CACCATCCTCTCCCATAAGCACCCATGTCTTTGAAT...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR GCA 90 bp ACAAATACATTCATATTCAAAGACATGGGTGCTTATGGGAGAGGATGGTGTAAAATGAATGTGCTGTTATaGCTTAAATGTGTGCACCAG +
Preference number: 4 (lower is better)
Translates to: TNTFIFKDMGAYGRGWCKMNVLL*LKCVHQ
Trigger: CTGGTGCACACATTTAAGGCATAACAGCACATTCAT...TTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS TCA 90 bp CACCGCGAGCGGTGGCGACCTCCAGAATTTCCTCATCGCTGTCGGTaGCCAAGTCCACAGACACTACGTCCAGCGTGCCCCGGGATGGAG +
Preference number: 5 (lower is better)
Translates to: HRERWRPPEFPHRCR*PSPQTLRPACPGME
Trigger: CTCCATCCCGGGGCACGCTGGACGTAGTGTCTGTGGACTTGGTCACCGACAGCGATGAGGAAATTCTGGAGGTCGCCACCGCTCGCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000562977.1
ENST00000565752.5
CDS-3UTR CAA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTGCCCGGCAACGGATTTaGAGTGGGAAGAGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: RESHSPQVQAGPSNREWGARQRI*SGKSRG
Trigger: CCCCCGACTCTTCCCACTCAAAATCCGTTGCCGGGC...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACACCGGAGCTGGAGCTGTaGGGACGTCTCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTPELEL*GRLCGL
Trigger: GAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGG...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCAAAACTCAGCATGACTaGTGGACGGAGCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPKTQHD*WTEPQA
Trigger: GGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTT...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS CCA 90 bp CCACTTCATCCTCTTGGCCCTGTTGCTCTTGACCCTGAGGTGGCTTaGGGCTCAGACAGGAACGGAGATCCTGGAGGCGCTTGTTCACCT +
Preference number: 5 (lower is better)
Translates to: PLHPLGPVALDPEVA*GSDRNGDPGGACSP
Trigger: AGGTGAACAAGCGCCTCCAGGATCTCCGTTCCTGTCTGAGCCCCAAGCCACCTCAGGGTCAAGAGCAACAGGGCCAAGAGGATGAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000568998.1
CDS-3UTR CAA 90 bp TTGGCCAGGAGGGTCTCAATCTCCTGCCCTCATGATCTGCCCGCCTTGGCCTCCTTCTGCTTTTGGTCCTaGGTGAAGGTGGGGACAGAG +
Preference number: 5 (lower is better)
Translates to: LARRVSISCPHDLPALASFCFWS*VKVGTE
Trigger: CTCTGTCCCCACCTTCACCAAGGACCAAAAGCAGAA...GGAGGCCAAGGCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTTGCAGTGGTGGAACCTaGGCTCACTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: RESHSPQVQAGPSNREWGCSGGT*AHCNLR
Trigger: GCGGAGATTGCAGTGAGCCAAGGTTCCACCACTGCA...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS GCA 90 bp TCTCGAGACAGTGAGACTTCCAGTGTCTGGTGTTTCTCCTTTCCCTaGACCCGGAGCTGGAGCTGTTGGGACGTCTCTGTGGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SRDSETSSVWCFSFP*TRSWSCWDVSVASG
Trigger: TCCAGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGGAAAGGAGAAACACCAGACACTGGAAGTCTCACTGTCTCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS CCA 90 bp CAAGACCACTTCATCCTCTTGGCCCTGTTGCTCTTGACCCTGAGGTaGCTTGGGGCTCAGACAGGAACGGAGATCCTGGAGGCGCTTGTT +
Preference number: 5 (lower is better)
Translates to: QDHFILLALLLLTLR*LGAQTGTEILEALV
Trigger: AACAAGCGCCTCCAGGATCTCCGTTCCTGTCTGAGCCCCAAGCCACCTCAGGGTCAAGAGCAACAGGGCCAAGAGGATGAAGTGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000568998.1
CDS-3UTR CAA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGCCGGAGCTGGAGCTGTaGGGACGTCTCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: ELGHFLQARQPHQCISLKPELEL*GRLCGL
Trigger: GAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGG...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp GATGCAGCCAAGGTGTCACCCCGGTGTGTACCAGCTGGACTTCAGCACTGTGTACGAGGTCTCGCTATGTaGCCCAGGCTAGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: DAAKVSPRCVPAGLQHCVRGLAM*PRLVSN
Trigger: GTTCGAGACTAGCCTGGGCAACATAGCGAGACCTCG...TACACAGTGCTGAAGTCCAGCTGGTACACACCGGGGTGACACCTTGGCTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCCGGGGTTTCACCATGTaGGCCAGGAGGGTCTCAATC +
Preference number: 5 (lower is better)
Translates to: PQATQGNNTHITHQVVNGRGFTM*ARRVSI
Trigger: GATTGAGACCCTCCTGGCCAACATGGTGAAACCCCG...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACTGCAGTGGTGGAACCTaGGCTCACTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNCSGGT*AHCNLR
Trigger: GCGGAGATTGCAGTGAGCCAAGGTTCCACCACTGCA...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAGAGGTCTTCCTGCCTaGAAATCCATGCCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNRGLPA*KSMPPA
Trigger: GGCTGGGGGCATGGATTTCAAGGCAGGAAGACCTCT...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR CAA 90 bp AGGGAAAGTCATTCTCCCCAAGTCCAGGCTGGGCCGTCAAACAGGGAGTGGGGTGGGGACAGAGGAGAGTaGTCCAGATCCAGAAACTCT +
Preference number: 5 (lower is better)
Translates to: RESHSPQVQAGPSNREWGGDRGE*SRSRNS
Trigger: AGAGTTTCTGGATCTGGACAACTCTCCTCTGTCCCC...ACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp CCAGCATGTGTGAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATTGGCCCTGTTGCTCTaGACCCTGAGGTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PACVSLVISCKPGNHTSVLALLL*TLRWLG
Trigger: CCCAAGCCACCTCAGGGTCAAGAGCAACAGGGCCAA...TACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAAACTCAGCATGACTaGTGGACGGAGCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNKTQHD*WTEPQA
Trigger: GGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTT...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCATTTTTGAGTGGAGCCTaGCTCTGTCGCCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: DGGERGGVKGHLQVTEAAFLSGA*LCRQAG
Trigger: TCCAGCCTGGCGACAGAGCAAGGCTCCACTCAAAAA...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp GCTGGCAAGGATAAGGAGAAAAGGGCGGCCTCAAGTAGGAGGGTCAGTCACCGTTTGGTCAGGGTGGTCTaGAACTCCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: AGKDKEKRAASSRRVSHRLVRVV*NSWPQV
Trigger: CACTTGAGGCCAGGAGTTCAAGACCACCCTGACCAA...ACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCCTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS TCA 90 bp AGAGCTTCCGTCCCGACAGTCCCATGGCCTCCTCATAGTGGGACATaGGGGTCTTTAGAGGGGAATCTCGAGACAGTGAGACTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: RASVPTVPWPPHSGT*GSLEGNLETVRLPV
Trigger: CACTGGAAGTCTCACTGTCTCGAGATTCCCCTCTAAAGACCCTCATGTCCCACTATGAGGAGGCCATGGGACTGTCGGGACGGAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS CCA 90 bp AGTGTCTGGTGTTTCTCCTTTCCCTGCACCCGGAGCTGGAGCTGTTaGGACGTCTCTGTGGCCTCTGGAGAACTTGTTAGTACCACACAG +
Preference number: 5 (lower is better)
Translates to: SVWCFSFPCTRSWSC*DVSVASGELVSTTQ
Trigger: CTGTGTGGTACTAACAAGTTCTCCAGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGGAAAGGAGAAACACCAGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAGTATGCGTTCTGCTTTaGGTCCTTGGTGAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTVCVLL*VLGEGG
Trigger: CCCACCTTCACCAAGGACCAAAAGCAGAACGCATAC...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp GCGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAACCGGAGCTGGAGCTGTaGGGACGTCTCTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: AASSRRVSHRSKENLENQPELEL*GRLCGL
Trigger: GAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGG...TTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CCACAGGCCACCCAGGGCAACAACACCCACATAACTCACCAAGTGGTTAACGGCTCTGGCCTTAGCTACTaGCTAAGCTCCTCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: PQATQGNNTHITHQVVNGSGLSY*LSSSAV
Trigger: CACAGCTGAGGAGCTTAGCAAGTAGCTAAGGCCAGA...GCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR CAA 90 bp GTTTATCGTGGCCTGTATCCGGTGCCAAGGGGTCAGGGGCACCCAGGTGTCCCCTGGAATTATCTGCAATaGCCCAAGAATGTACAAGCA +
Preference number: 5 (lower is better)
Translates to: VYRGLYPVPRGQGHPGVPWNYLQ*PKNVQA
Trigger: TGCTTGTACATTCTTGGGCAATTGCAGATAATTCCA...GGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCCACGATAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CCAGCATGTGTGAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATTTTTGAGTGGAGCCTaGCTCTGTCGCCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PACVSLVISCKPGNHTSVFLSGA*LCRQAG
Trigger: TCCAGCCTGGCGACAGAGCAAGGCTCCACTCAAAAA...TACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACATGGGATTTCACCAAGTaGGTCAGGGTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTWDFTK*VRVVLN
Trigger: GTTCAAGACCACCCTGACCAACTTGGTGAAATCCCA...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp CAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCAAAGGGGTGGTGGGGATaGCAGCAAACTGGAATTCAC +
Preference number: 5 (lower is better)
Translates to: QVTEAAKLSMTCGRSHRPKGWWG*QQTGIH
Trigger: GTGAATTCCAGTTTGCTGCAATCCCCACCACCCCTT...TGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS GCA 90 bp TGGAGGCGCTTGTTCACCTCACTTAACTTCTTGAGTGCCCGAGTATaGGTTCTGCTTTTGGTCCTTGGTGAAGGTGGGGACAGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: WRRLFTSLNFLSARV*VLLLVLGEGGDRGE
Trigger: CTCTCCTCTGTCCCCACCTTCACCAAGGACCAAAAGCAGAACGCATACTCGGGCACTCAAGAAGTTAAGTGAGGTGAACAAGCGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000568998.1
CDS GCA 90 bp TCCCCTCTCCCACGCTCTTCCCTTGAGCCTCAGGAGACAACTGACTaGAGGAATATAAACCCCAGGAATTCTCTTAAGAGAAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: SPLPRSSLEPQETTD*RNINPRNSLKRSQR
Trigger: CCGCTGGCTTCTCTTAAGAGAATTCCTGGGGTTTATATTCCTGCAGTCAGTTGTCTCCTGAGGCTCAAGGGAAGAGCGTGGGAGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS-3UTR CAA 90 bp GATGCAGCCAAGGTGTCACCCCGGTGTGTACCAGCTGGACTTCAGCACTGTGTAACCTCACTTAACTTCTaGAGTGCCCGAGTATGCGTT +
Preference number: 5 (lower is better)
Translates to: DAAKVSPRCVPAGLQHCVTSLNF*SARVCV
Trigger: AACGCATACTCGGGCACTCAAGAAGTTAAGTGAGGT...TACACAGTGCTGAAGTCCAGCTGGTACACACCGGGGTGACACCTTGGCTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCAGACCACTTCATCCTCTaGGCCCTGTTGCTCTTGACC +
Preference number: 5 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPDHFIL*ALLLLT
Trigger: GGTCAAGAGCAACAGGGCCAAGAGGATGAAGTGGTC...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCATGGCCTCTGGAGAACTaGTTAGTACCACACAGTCAA +
Preference number: 5 (lower is better)
Translates to: DGGERGGVKGHLQVTEAAWPLEN*LVPHSQ
Trigger: TTGACTGTGTGGTACTAACAAGTTCTCCAGAGGCCA...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACATGGCCTCTGGAGAACTaGTTAGTACCACACAGTCAA +
Preference number: 5 (lower is better)
Translates to: AKLSMTCGRSHRPPRATTWPLEN*LVPHSQ
Trigger: TTGACTGTGTGGTACTAACAAGTTCTCCAGAGGCCA...TGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp TGGGCTAGGCGTGGTGTAAATCCCAGGCCTGGAAGCTCCTACCCAACCCTCATTTGGCCTCTGGAGAACTaGTTAGTACCACACAGTCAA +
Preference number: 5 (lower is better)
Translates to: WARRGVNPRPGSSYPTLIWPLEN*LVPHSQ
Trigger: TTGACTGTGTGGTACTAACAAGTTCTCCAGAGGCCA...AATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACACCACGCCTAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp AAGGGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAAAACTCAGCATGACTaGTGGACGGAGCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: KGHLQVTEAAKLSMTCGRKTQHD*WTEPQA
Trigger: GGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTT...CCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCAAAAAGAGTACCTCAGTaGTCTGCTTACGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: DGGERGGVKGHLQVTEAAKRVPQ*SAYASA
Trigger: GGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTT...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAAAGAGTACCTCAGTaGTCTGCTTACGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNKRVPQ*SAYASA
Trigger: GGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTT...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCCGAGGTCTCGCTATGTaGCCCAGGCTAGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: KWLTALNQGQQERGQKSLRGLAM*PRLVSN
Trigger: GTTCGAGACTAGCCTGGGCAACATAGCGAGACCTCG...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAACATGATCTGCCCGCCTaGGCCTCCCAAAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKHDLPA*ASQSPL
Trigger: AAGGGGGCTTTGGGAGGCCAAGGCGGGCAGATCATG...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGACATGATCTGCCCGCCTaGGCCTCCCAAAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: PHGRSKQYCISRRVNGARHDLPA*ASQSPL
Trigger: AAGGGGGCTTTGGGAGGCCAAGGCGGGCAGATCATG...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAACCTTCGCTGTCACTGTaGCTGTTATCCCGGGACGCG +
Preference number: 5 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKPSLSL*LLSRDA
Trigger: CGCGTCCCGGGATAACAGCAACAGTGACAGCGAAGG...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGAGATCCTGGAGGCGCTaGTTCACCTCACTTAACTTC +
Preference number: 5 (lower is better)
Translates to: ELGHFLQARQPHQCISLKRSWRR*FTSLNF
Trigger: GAAGTTAAGTGAGGTGAACAAGCGCCTCCAGGATCT...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320805.8
CDS-3UTR CAA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCCCAGCATGTGTGAGCTaGGTCATTTCCTGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: KWLTALNQGQQERGQKSLPACVS*VISCKP
Trigger: TGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp TGCAAAACTCAGCATGACTTGTGGACGGAGCCACAGGCCACCCAGGGCAACAACAAAACCAGAGAATCTTaGCATGGGACTGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: CKTQHDLWTEPQATQGNNKTRES*HGTVFL
Trigger: CAGGAATACAGTCCCATGCAAAGATTCTCTGGTTTT...GTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CGGCCTCAAGTAGGAGGGTCAGTCACCGTTCTAAAGAAAATCTGGAAAACCAAACGGGGTTTCACCATGTaGGCCAGGAGGGTCTCAATC +
Preference number: 5 (lower is better)
Translates to: RPQVGGSVTVLKKIWKTKRGFTM*ARRVSI
Trigger: GATTGAGACCCTCCTGGCCAACATGGTGAAACCCCG...TTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS GCA 90 bp GGAGGACAAAGACAGGGCATCCCTGATAAGATTCAGAGAACACCCTaGTGGCTCCAGTGTTCCCAAAGAACTTGCTGCAGATGTAACAAG +
Preference number: 5 (lower is better)
Translates to: GGQRQGIPDKIQRTP*WLQCSQRTCCRCNK
Trigger: CTTGTTACATCTGCAGCAAGTTCTTTGGGAACACTGGAGCCAGCAGGGTGTTCTCTGAATCTTATCAGGGATGCCCTGTCTTTGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS-3UTR CAA 90 bp GATGGTGGTGAAAGGGGAGGGGTGAAGGGACATCTCCAAGTCACAGAGGCTGCAGACAAAAGTCACTCCTaGATTTTGCTGCAGCTTAAA +
Preference number: 5 (lower is better)
Translates to: DGGERGGVKGHLQVTEAADKSHS*ILLQLK
Trigger: TTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTC...TGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCGTGTGTAAACTGCAATaGACATTGTGGAGTGCCACA +
Preference number: 5 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSVCKLQ*TLWSAT
Trigger: TGTGGCACTCCACAATGTCAATTGCAGTTTACACAC...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS CCA 90 bp GGACAAAGACAGGGCATCCCTGATAAGATTCAGAGAACACCCTGCTaGCTCCAGTGTTCCCAAAGAACTTGCTGCAGATGTAACAAGATG +
Preference number: 5 (lower is better)
Translates to: GQRQGIPDKIQRTPC*LQCSQRTCCRCNKM
Trigger: CATCTTGTTACATCTGCAGCAAGTTCTTTGGGAACACTGGAGCCAGCAGGGTGTTCTCTGAATCTTATCAGGGATGCCCTGTCTTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS-3UTR CAA 90 bp CCACATGGCAGGTCAAAGCAATACTGCATTTCTAGAAGAGTCAATGGGGCTAGACCAGCATGTGTGAGCTaGGTCATTTCCTGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: PHGRSKQYCISRRVNGARPACVS*VISCKP
Trigger: TGGCTTGCAGGAAATGACCAAGCTCACACATGCTGG...TCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp ACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCCAGTGTGTAAACTGCAATaGACATTGTGGAGTGCCACA +
Preference number: 5 (lower is better)
Translates to: TSPSHRGCKTQHDLWTEPVCKLQ*TLWSAT
Trigger: TGTGGCACTCCACAATGTCAATTGCAGTTTACACAC...TGGCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS GCA 90 bp ATTCAGAGAACACCCTGCTGGCTCCAGTGTTCCCAAAGAACTTGCTaGAGATGTAACAAGATGTCACAGATTCTCAACACCTTACCGCCT +
Preference number: 5 (lower is better)
Translates to: IQRTPCWLQCSQRTC*RCNKMSQILNTLPP
Trigger: AGGCGGTAAGGTGTTGAGAATCTGTGACATCTTGTTACATCTGCAGCAAGTTCTTTGGGAACACTGGAGCCAGCAGGGTGTTCTCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS-3UTR CAA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAG +
Preference number: 5 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSSHSLI*LQLKDK
Trigger: CTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACT...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GGACATCTCCAAGTCACAGAGGCTGCAAAACTCAGCATGACTTGTGGACGGAGCGACAAAAGTCACTCCTaGATTTTGCTGCAGCTTAAA +
Preference number: 5 (lower is better)
Translates to: GHLQVTEAAKLSMTCGRSDKSHS*ILLQLK
Trigger: TTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTC...GCTCCGTCCACAAGTCATGCTGAGTTTTGCAGCCTCTGTGACTTGGAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS GCA 90 bp AAGATTCAGAGAACACCCTGCTGGCTCCAGTGTTCCCAAAGAACTTaGTGCAGATGTAACAAGATGTCACAGATTCTCAACACCTTACCG +
Preference number: 5 (lower is better)
Translates to: KIQRTPCWLQCSQRT*CRCNKMSQILNTLP
Trigger: CGGTAAGGTGTTGAGAATCTGTGACATCTTGTTACATCTGCAGCAAGTTCTTTGGGAACACTGGAGCCAGCAGGGTGTTCTCTGAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS CCA 90 bp ACAAAGAAATATAGCAGCCATGGGTTAGAACAAAGAAAGGGGTGGTaGGGATTGCAGCAAACTGGAATTCACATGCCACCTAGACAGGCT +
Preference number: 5 (lower is better)
Translates to: TKKYSSHGLEQRKGW*GLQQTGIHMPPRQA
Trigger: AGCCTGTCTAGGTGGCATGTGAATTCCAGTTTGCTGCAATCCCCACCACCCCTTTCTTTGTTCTAACCCATGGCTGCTATATTTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS-3UTR CAA 90 bp CACATAACTCACCAAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAG +
Preference number: 5 (lower is better)
Translates to: HITHQVVNGSKPGSTGEGSHSLI*LQLKDK
Trigger: CTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACT...CCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS-3UTR CAA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGAGTCACTCCTTGATTTaGCTGCAGCTTAAAGATAAG +
Preference number: 5 (lower is better)
Translates to: ELGHFLQARQPHQCISLKSHSLI*LQLKDK
Trigger: CTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACT...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp GAGCTTGGTCATTTCCTGCAAGCCAGGCAACCACACCAGTGTATAAGCCTCAAGGACAAAAGTCACTCCTaGATTTTGCTGCAGCTTAAA +
Preference number: 5 (lower is better)
Translates to: ELGHFLQARQPHQCISLKDKSHS*ILLQLK
Trigger: TTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTC...CTTGAGGCTTATACACTGGTGTGGTTGCCTGGCTTGCAGGAAATGACCAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp AAGTGGTTAACGGCTCTAAACCAGGGTCAACAGGAGAGGGGACAAAAGTCACTCAAAACCAGAGAATCTTaGCATGGGACTGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: KWLTALNQGQQERGQKSLKTRES*HGTVFL
Trigger: CAGGAATACAGTCCCATGCAAAGATTCTCTGGTTTT...GAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAGAGCCGTTAACCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS-3UTR CAA 90 bp CATCCTTCAAAAGAGTACCTCAGTTGTCTGCTTACGCTTCAGCCAGCATGTGTGTGGAATTATCTGCAATaGCCCAAGAATGTACAAGCA +
Preference number: 5 (lower is better)
Translates to: HPSKEYLSCLLTLQPACVWNYLQ*PKNVQA
Trigger: TGCTTGTACATTCTTGGGCAATTGCAGATAATTCCA...CACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000564978.5
CDS TCA 72 bp CGGTGGCGACCTCCAGAATTTCCTCATCGCTGTCGGTaGCCAAGTCCACAGACACTACGTCCAGCGTGCCCC +
Preference number: 6 (lower is better)
Translates to: RWRPPEFPHRCR*PSPQTLRPACP
Trigger: GGGGCACGCTGGACGTAGTGTCTGTGGACTTGGTCACCGACAGCGATGAGGAAATTCTGGAGGTCGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000562977.1
ENST00000565752.5
CDS CAA 90 bp GGGCCCTTCCACCAAGACCACTTCATCCTCTTGGCCCTGTTGCTCTaGACCCTGAGGTGGCTTGGGGCTCAGACAGGAACGGAGATCCTG +
Preference number: 6 (lower is better)
Translates to: GPFHQDHFILLALLL*TLRWLGAQTGTEIL
Trigger: CAGGATCTCCGTTCCTGTCTGAGCCCCAAGCCACCTCAGGGTCAAGAGCAACAGGGCCAAGAGGATGAAGTGGTCTTGGTGGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000568998.1
CDS CCA 72 bp TTCATCCTCTTGGCCCTGTTGCTCTTGACCCTGAGGTaGCTTGGGGCTCAGACAGGAACGGAGATCCTGGAG +
Preference number: 6 (lower is better)
Translates to: FILLALLLLTLR*LGAQTGTEILE
Trigger: CTCCAGGATCTCCGTTCCTGTCTGAGCCCCAAGCCACCTCAGGGTCAAGAGCAACAGGGCCAAGAGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000568998.1
CDS CCA 72 bp AGTGTCTGGTGTTTCTCCTTTCCCTGCACCCGGAGCTaGAGCTGTTGGGACGTCTCTGTGGCCTCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: SVWCFSFPCTRS*SCWDVSVASGE
Trigger: TTCTCCAGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGGAAAGGAGAAACACCAGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS GCA 72 bp AGGGGTGGTGGGGATTGCAGCAAACTGGAATTCACATaGCACCTAGACAGGCTGGCTGTTACGCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RGGGDCSKLEFT*HLDRLAVTQLQ
Trigger: CTGGAGCTGCGTAACAGCCAGCCTGTCTAGGTGGCATGTGAATTCCAGTTTGCTGCAATCCCCACCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS CCA 72 bp CCTGCACCCGGAGCTGGAGCTGTTGGGACGTCTCTGTaGCCTCTGGAGAACTTGTTAGTACCACACAGTCAA +
Preference number: 6 (lower is better)
Translates to: PAPGAGAVGTSL*PLENLLVPHSQ
Trigger: TTGACTGTGTGGTACTAACAAGTTCTCCAGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS TCA 72 bp GTCCCGACAGTCCCATGGCCTCCTCATAGTGGGACATaGGGGTCTTTAGAGGGGAATCTCGAGACAGTGAGA +
Preference number: 6 (lower is better)
Translates to: VPTVPWPPHSGT*GSLEGNLETVR
Trigger: TCTCACTGTCTCGAGATTCCCCTCTAAAGACCCTCATGTCCCACTATGAGGAGGCCATGGGACTGTCGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS CCA 72 bp TGTTTCTCCTTTCCCTGCACCCGGAGCTGGAGCTGTTaGGACGTCTCTGTGGCCTCTGGAGAACTTGTTAGT +
Preference number: 6 (lower is better)
Translates to: CFSFPCTRSWSC*DVSVASGELVS
Trigger: ACTAACAAGTTCTCCAGAGGCCACAGAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGGAAAGGAGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320805.8
ENST00000564978.5
ENST00000568148.1
CDS CAA 72 bp TTGGGGCTCAGACAGGAACGGAGATCCTGGAGGCGCTaGTTCACCTCACTTAACTTCTTGAGTGCCCGAGTA +
Preference number: 6 (lower is better)
Translates to: LGLRQERRSWRR*FTSLNFLSARV
Trigger: TACTCGGGCACTCAAGAAGTTAAGTGAGGTGAACAAGCGCCTCCAGGATCTCCGTTCCTGTCTGAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320805.8
ENST00000568998.1
CDS GCA 72 bp CAAGATGTCACAGATTCTCAACACCTTACCGCCTCCTaGCCCGCCCAGGACTACAGAATCAGCATCTCTTCA +
Preference number: 6 (lower is better)
Translates to: QDVTDSQHLTAS*PAQDYRISISS
Trigger: TGAAGAGATGCTGATTCTGTAGTCCTGGGCGGGGCAGGAGGCGGTAAGGTGTTGAGAATCTGTGACATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS CAA 90 bp TGCCCCCAGCCACACCACCCAAACACAAGCTCTGGCCTTAGCTACTaGCTAAGCTCCTCAGCTGTGAGTTTCATCATATTTACCTGGCAA +
Preference number: 6 (lower is better)
Translates to: CPQPHHPNTSSGLSY*LSSSAVSFIIFTWQ
Trigger: TTGCCAGGTAAATATGATGAAACTCACAGCTGAGGAGCTTAGCAAGTAGCTAAGGCCAGAGCTTGTGTTTGGGTGGTGTGGCTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS GCA 72 bp AGACAGGGCATCCCTGATAAGATTCAGAGAACACCCTaGTGGCTCCAGTGTTCCCAAAGAACTTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: RQGIPDKIQRTP*WLQCSQRTCCR
Trigger: TCTGCAGCAAGTTCTTTGGGAACACTGGAGCCAGCAGGGTGTTCTCTGAATCTTATCAGGGATGCCCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS CAA 72 bp AGCCATGGGTTAGAACAAAGAAAGGGGTGGTGGGGATaGCAGCAAACTGGAATTCACATGCCACCTAGACAG +
Preference number: 6 (lower is better)
Translates to: SHGLEQRKGWWG*QQTGIHMPPRQ
Trigger: CTGTCTAGGTGGCATGTGAATTCCAGTTTGCTGCAATCCCCACCACCCCTTTCTTTGTTCTAACCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS CAA 90 bp AAATATAGCAGCCATGGGTTAGAACAAAGAAAGGGGTGGTGGGGATaGCAGCAAACTGGAATTCACATGCCACCTAGACAGGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: KYSSHGLEQRKGWWG*QQTGIHMPPRQAGC
Trigger: ACAGCCAGCCTGTCTAGGTGGCATGTGAATTCCAGTTTGCTGCAATCCCCACCACCCCTTTCTTTGTTCTAACCCATGGCTGCTATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568148.1
CDS GCA 72 bp CCACGCTCTTCCCTTGAGCCTCAGGAGACAACTGACTaGAGGAATATAAACCCCAGGAATTCTCTTAAGAGA +
Preference number: 6 (lower is better)
Translates to: PRSSLEPQETTD*RNINPRNSLKR
Trigger: TCTCTTAAGAGAATTCCTGGGGTTTATATTCCTGCAGTCAGTTGTCTCCTGAGGCTCAAGGGAAGAGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS GCA 72 bp ACACCCTGCTGGCTCCAGTGTTCCCAAAGAACTTGCTaGAGATGTAACAAGATGTCACAGATTCTCAACACC +
Preference number: 6 (lower is better)
Translates to: TPCWLQCSQRTC*RCNKMSQILNT
Trigger: GGTGTTGAGAATCTGTGACATCTTGTTACATCTGCAGCAAGTTCTTTGGGAACACTGGAGCCAGCAGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565752.5
ENST00000565919.1
CDS CAA 72 bp CCACACCACCCAAACACAAGCTCTGGCCTTAGCTACTaGCTAAGCTCCTCAGCTGTGAGTTTCATCATATTT +
Preference number: 6 (lower is better)
Translates to: PHHPNTSSGLSY*LSSSAVSFIIF
Trigger: AAATATGATGAAACTCACAGCTGAGGAGCTTAGCAAGTAGCTAAGGCCAGAGCTTGTGTTTGGGTGGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568148.1